Lsi02G004460 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G004460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPectinesterase
Locationchr02 : 3735609 .. 3736606 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTACTAAATACATACGTAATTATTCAATCTATCAGAATAGTTAATCAAACACTAAACTAAGTTATAACTTTTAATTAAAAACTTATATTAATTAAGTACTAAATCACTAATCATGTCAAATGCTATTACTCTAAATAAATTTTAGATAAAGACGGGAGAAATATCAAATTTTGAACTCTGCTTTCGGTAAACTCTGTTGTTGGGTAAGGCAGTGGCCAGTCTATTAATTTAAACTTCTGGAAAATTTTACCTTTCAATTAAGCTTTTCACTTAGATACATACTATTTAACCATTTTCATTTGATGTAGCGGTTAACGGTGATAACTTCTTGGCACAATCGTTGACCTTCGAGAACTCTACTGGAGCTCAAAACGGCCCAGCAGTGGCAGTCCTTGACTACGTTCAATACACTGCTTATTACAAGTGCCGATTCTTGGGTTTACAAGACACGTTGTACGTCAAAGGTCAACTCCAATTCTTTAAAGAGTGTGATATCTACGGTACCGTTGACTTCATTTTTGGAAATGGGTTAGTCATGTTCCAAGATTGTAACATATACGCTCGAATGTCAAACCAATCTATCACAGTCACTACTCAATCCAAAGAAGCCTCAACTGCGATGAGCGGCTTCACCTTTCAAAACTGTACCGTCACTGTTTCATCGGAGATAGCAGCCAACAAAGCCAACGTCTACGTCTATCTTGGCCGGCCATGGAGACAATATTCACAAGTTGTGTTCATGGAGTCATTTCTTGATGACATGGTGGTGCCTGAAGGATGGTCGAAGTGGCCAGGTGTAACGATGAACAATTTGTTTTATGCAGAATTCAACAACCGTGGTCCTGGGGCGGATGTCTCTAAAAGGGTTACTTGGACAGGTTTTCACGTATTGGATAAGCAATCAACGATCCAATTTTCTATAGACAACTTTATTAATGGGTCTGATTGGTTGCCAGAAACTGGCGTTCCATTTAGACGTGGACTTCTTTCATAA

mRNA sequence

ATGACTACTAAATACATACCGGTTAACGGTGATAACTTCTTGGCACAATCGTTGACCTTCGAGAACTCTACTGGAGCTCAAAACGGCCCAGCAGTGGCAGTCCTTGACTACGTTCAATACACTGCTTATTACAAGTGCCGATTCTTGGGTTTACAAGACACGTTGTACGTCAAAGGTCAACTCCAATTCTTTAAAGAGTGTGATATCTACGGTACCGTTGACTTCATTTTTGGAAATGGGTTAGTCATGTTCCAAGATTGTAACATATACGCTCGAATGTCAAACCAATCTATCACAGTCACTACTCAATCCAAAGAAGCCTCAACTGCGATGAGCGGCTTCACCTTTCAAAACTGTACCGTCACTGTTTCATCGGAGATAGCAGCCAACAAAGCCAACGTCTACGTCTATCTTGGCCGGCCATGGAGACAATATTCACAAGTTGTGTTCATGGAGTCATTTCTTGATGACATGGTGGTGCCTGAAGGATGGTCGAAGTGGCCAGGTGTAACGATGAACAATTTGTTTTATGCAGAATTCAACAACCGTGGTCCTGGGGCGGATGTCTCTAAAAGGGTTACTTGGACAGGTTTTCACGTATTGGATAAGCAATCAACGATCCAATTTTCTATAGACAACTTTATTAATGGGTCTGATTGGTTGCCAGAAACTGGCGTTCCATTTAGACGTGGACTTCTTTCATAA

Coding sequence (CDS)

ATGACTACTAAATACATACCGGTTAACGGTGATAACTTCTTGGCACAATCGTTGACCTTCGAGAACTCTACTGGAGCTCAAAACGGCCCAGCAGTGGCAGTCCTTGACTACGTTCAATACACTGCTTATTACAAGTGCCGATTCTTGGGTTTACAAGACACGTTGTACGTCAAAGGTCAACTCCAATTCTTTAAAGAGTGTGATATCTACGGTACCGTTGACTTCATTTTTGGAAATGGGTTAGTCATGTTCCAAGATTGTAACATATACGCTCGAATGTCAAACCAATCTATCACAGTCACTACTCAATCCAAAGAAGCCTCAACTGCGATGAGCGGCTTCACCTTTCAAAACTGTACCGTCACTGTTTCATCGGAGATAGCAGCCAACAAAGCCAACGTCTACGTCTATCTTGGCCGGCCATGGAGACAATATTCACAAGTTGTGTTCATGGAGTCATTTCTTGATGACATGGTGGTGCCTGAAGGATGGTCGAAGTGGCCAGGTGTAACGATGAACAATTTGTTTTATGCAGAATTCAACAACCGTGGTCCTGGGGCGGATGTCTCTAAAAGGGTTACTTGGACAGGTTTTCACGTATTGGATAAGCAATCAACGATCCAATTTTCTATAGACAACTTTATTAATGGGTCTGATTGGTTGCCAGAAACTGGCGTTCCATTTAGACGTGGACTTCTTTCATAA

Protein sequence

MTTKYIPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKECDIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSSEIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGPGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS
Homology
[Close]
BLAST of Lsi02G004460 vs. Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 107/230 (46.52%), Postives = 152/230 (66.09%), Query Frame = 1 

Query: 6   IPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFK 65
           + V GDNF+A+ +T  N+ G  N  AVA+      + +Y+C F G QDTLYV  Q QF++
Sbjct: 281 VAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYR 340

Query: 66  ECDIYGTVDFIFGNGLVMFQDCNIYARM-SNQSITVTTQSKEASTAMSGFTFQNCTVTVS 125
           ECDIYGTVDFIFGN  V+ Q+CNI+AR   N++ T+T Q +      +G    NC VT +
Sbjct: 341 ECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAA 400

Query: 126 SEIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNR 185
           S++   +++V  +LGRPW+QYS+ V++++FLD ++ P GW +W G   +N L+YAE+ N 
Sbjct: 401 SDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNT 460

Query: 186 GPGADVSKRVTWTGFHVLDKQSTI-QFSIDNFINGSDWLPETGVPFRRGL 233
           GPG+  + RV W G+HVL   S + QF++ NFI G+ WLP T VPF  GL
Sbjct: 461 GPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510

[Close]
BLAST of Lsi02G004460 vs. Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 8.9e-58
Identity = 98/230 (42.61%), Postives = 146/230 (63.48%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V   NF+A ++TF N+ G +   AVA+      + +Y C F   QDTLY     QF++EC
Sbjct: 344 VTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYREC 403

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYAR--MSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           DIYGTVDFIFGN  V+FQDCN+Y R  M NQ   +T Q +      +G +  NCT+  + 
Sbjct: 404 DIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPAD 463

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++ ++   V  YLGRPW++YS+ VFM+S++D++V P GW +W G   ++ L+YAE+NN G
Sbjct: 464 DLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTG 523

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
            G+  + RV W G+HV++      F+++NF+ G  W+ ++GVP+  GLLS
Sbjct: 524 SGSSTTDRVVWPGYHVINSTDANNFTVENFLLGDGWMVQSGVPYISGLLS 573

[Close]
BLAST of Lsi02G004460 vs. Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.4e-57
Identity = 96/230 (41.74%), Postives = 146/230 (63.48%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V   NF+A ++TF N+ G +   AVA+     ++ +Y C F   QDTLY     QF++EC
Sbjct: 350 VTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYREC 409

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYAR--MSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           D+YGTVDFIFGN  V+FQ+CN+Y R  M NQ   +T Q +      +G + QNCT+  + 
Sbjct: 410 DVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPAD 469

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++ ++   V  YLGRPW++YS+ V+M+S++D  V P GW +W G   ++ L+YAE+NN G
Sbjct: 470 DLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTG 529

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           PG++ + RVTW G+HV++      F++      +DW+ +TGVP+  GL+S
Sbjct: 530 PGSNTTNRVTWPGYHVINSTDAANFTVTGLFIEADWIWKTGVPYTSGLIS 579

[Close]
BLAST of Lsi02G004460 vs. Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.8e-57
Identity = 98/230 (42.61%), Postives = 151/230 (65.65%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V G+ F+A  +TF N+ G +   AVA+ +  + +++Y+C F G QDTLYV    QF++EC
Sbjct: 388 VVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYREC 447

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYAR--MSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           DIYGTVDFIFGN   +FQ+CNIYAR  M+ Q   +T   +      +G +  NCT+  + 
Sbjct: 448 DIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAP 507

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++AA   +   +LGRPW+ YS+ VFM+S++ D+V P GW +W G + ++ ++Y E++N G
Sbjct: 508 DLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFG 567

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           PGA+ ++RV W G+++L+    + F++ NF  G  WLP+T +PF  GLLS
Sbjct: 568 PGANTNQRVQWLGYNLLNLAEAMNFTVYNFTMGDTWLPQTDIPFYGGLLS 617

[Close]
BLAST of Lsi02G004460 vs. Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-55
Identity = 94/230 (40.87%), Postives = 141/230 (61.30%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           ++G NF+  ++T  N+ G   G AVA+      + +Y C F   QDTLY     QF++EC
Sbjct: 331 LSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYREC 390

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYARM--SNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           D+YGTVDFIFGN  V+ Q+CN+Y R     QS  VT Q +      +G     CT+  + 
Sbjct: 391 DVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPAD 450

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++A +   V  YLGRPW++YS+ V M++++D  + P GW+ W G   ++ L+YAE+NN G
Sbjct: 451 DLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTG 510

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           PG+D + RVTW G+HV++      F++ NF+ G  W+ +TGVPF  GL++
Sbjct: 511 PGSDTTNRVTWPGYHVINATDASNFTVTNFLVGEGWIGQTGVPFVGGLIA 560

[Close]
BLAST of Lsi02G004460 vs. TrEMBL
Match: A0A0A0LR14_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.5e-93
Identity = 162/229 (70.74%), Postives = 189/229 (82.53%), Query Frame = 1 

Query: 6   IPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFK 65
           + V GDNF+A+SLTFENS G QN  AVAV D   +TAYYKCRFL  QDTLYV G+ QFFK
Sbjct: 108 LTVQGDNFMAESLTFENSAGPQNNQAVAVFDKANHTAYYKCRFLSFQDTLYVNGKPQFFK 167

Query: 66  ECDIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 125
           E DIYG+VDFI G G VMFQDCNIYARM   SITVT QSK    ++SGF+FQNCTVTVS 
Sbjct: 168 ESDIYGSVDFICGYGQVMFQDCNIYARMPINSITVTAQSKYILRSVSGFSFQNCTVTVSR 227

Query: 126 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGP 185
           EI++NK NV V+LGRPW+QYS+VVFMESFLDD+V  EGW +W GV +NNLFY EFNN GP
Sbjct: 228 EISSNKQNVKVFLGRPWKQYSKVVFMESFLDDVVASEGWVEWIGVPVNNLFYGEFNNCGP 287

Query: 186 GADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           GADVSKRV WT +H+LDK+S ++F++DNF+NGS+WLPETG+PFRRGL S
Sbjct: 288 GADVSKRVNWTSYHLLDKESALRFTVDNFVNGSEWLPETGIPFRRGLHS 336

[Close]
BLAST of Lsi02G004460 vs. TrEMBL
Match: A0A0A0L1M3_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.4e-79
Identity = 138/227 (60.79%), Postives = 174/227 (76.65%), Query Frame = 1 

Query: 6   IPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFK 65
           + VNG NF+AQ LTF+N+ G   G A+A+LD   +TAYYKC FLG QDTLY     QFFK
Sbjct: 103 LTVNGSNFMAQFLTFQNTAGPNEGQAIALLDQATHTAYYKCVFLGYQDTLYAGALPQFFK 162

Query: 66  ECDIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 125
           ECDIYG+VDFIFGNGLV+FQDCNIYAR+ +  ITVT QSK +  ++SGF FQNC VTVS 
Sbjct: 163 ECDIYGSVDFIFGNGLVVFQDCNIYARLFDVQITVTAQSKPSLNSLSGFIFQNCKVTVSP 222

Query: 126 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGP 185
           EIA++K  V V+LGRPWR YS VVF++SFLD++V P+GW +WPGV  N L+YAE+NN G 
Sbjct: 223 EIASSKDKVTVFLGRPWRMYSMVVFIDSFLDNVVQPKGWLEWPGVPENLLYYAEYNNSGG 282

Query: 186 GADVSKRVTWTGFHVLDKQSTI-QFSIDNFINGSDWLPETGVPFRRG 232
           GA+ S+RV W G+H L+    +  F+++ FING+ WLP+TG+PFR G
Sbjct: 283 GANTSQRVNWPGYHALNNAKEVATFTVEIFINGTQWLPQTGIPFRAG 329

[Close]
BLAST of Lsi02G004460 vs. TrEMBL
Match: W9R0V2_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_012494 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.7e-63
Identity = 116/225 (51.56%), Postives = 159/225 (70.67%), Query Frame = 1 

Query: 10  GDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKECDI 69
           G  F+AQSLT ENS G QN  A A+ +    +A+Y C FLG QDTLY K   QF+K+C I
Sbjct: 2   GQGFVAQSLTIENSAGPQNHQAAALYNTADQSAFYNCIFLGYQDTLYAKENRQFYKDCKI 61

Query: 70  YGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSSEIA- 129
           YGTVDFIFG+   +FQDC+IYAR     IT+T Q++ + + ++GF+FQ C V  +  +  
Sbjct: 62  YGTVDFIFGHAKAVFQDCHIYAR-PETLITITAQNRASDSEVNGFSFQGCHVEATPGLTP 121

Query: 130 ANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGPGAD 189
             +AN+ V+LGRPW +YS V+FM+S  DD+V P+GW++WPGV +++L+YAE++N G GAD
Sbjct: 122 PQRANLRVFLGRPWDRYSTVIFMQSIFDDIVDPQGWTEWPGVPVDHLYYAEYDNSGLGAD 181

Query: 190 VSKRVTWTGFHVLDK-QSTIQFSIDNFINGSDWLPETGVPFRRGL 233
            SKRV W G+HV+ K      F++  FI+G+ WLPETGVP+R GL
Sbjct: 182 TSKRVNWKGYHVVKKWMEADWFTVAKFIDGNSWLPETGVPYRSGL 225

[Close]
BLAST of Lsi02G004460 vs. TrEMBL
Match: B9GPD9_POPTR (Pectinesterase OS=Populus trichocarpa GN=POPTR_0002s14640g PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.6e-61
Identity = 111/228 (48.68%), Postives = 155/228 (67.98%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V GDNF+A+ +TF N+ GA+N  AVA+     ++ +YKC F G QDTLYV  Q QF++EC
Sbjct: 287 VVGDNFIARDMTFRNTAGAKNHQAVALRSGSDFSVFYKCSFEGYQDTLYVYSQRQFYREC 346

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYARM-SNQSITVTTQSKEASTAMSGFTFQNCTVTVSSE 127
           DIYGTVDFIFGN  V+FQ+CNIYAR   N+ IT+T Q +      +G +  NC VT +S+
Sbjct: 347 DIYGTVDFIFGNAAVVFQNCNIYARSPPNKIITITAQGRTDPNQNTGISIHNCRVTAASD 406

Query: 128 IAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRGP 187
           +   + +V  YLGRPW+QYS+ VFM++FLD ++ P GWS W G   ++ L+Y E+ N GP
Sbjct: 407 LKPVQGSVKTYLGRPWKQYSRTVFMKTFLDSLINPAGWSPWNGNFALDTLYYGEYMNTGP 466

Query: 188 GADVSKRVTWTGFHVLDKQSTI-QFSIDNFINGSDWLPETGVPFRRGL 233
           G+  + RV W G+ V+   +   QF++ +FI+G++WLP T VPF  GL
Sbjct: 467 GSSTANRVNWKGYRVITSSTVASQFTVGSFISGNNWLPATNVPFTAGL 514

[Close]
BLAST of Lsi02G004460 vs. TrEMBL
Match: V7BGJ7_PHAVU (Pectinesterase OS=Phaseolus vulgaris GN=PHAVU_007G198200g PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60
Identity = 107/231 (46.32%), Postives = 153/231 (66.23%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V G  F+A ++TF N+ G+    AVAV +    + +Y C F G QDTLYV  Q QF+K C
Sbjct: 297 VVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYNCSFEGYQDTLYVHSQRQFYKSC 356

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYAR--MSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           DIYGTVDFIFGN   +FQDCNIY R  M NQ   +T Q +      +G + QNC +T +S
Sbjct: 357 DIYGTVDFIFGNAATVFQDCNIYPRLPMQNQFNAITAQGRTDPNQNTGISIQNCCITAAS 416

Query: 128 EI---AANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFN 187
           E+    +N   +  YLGRPW++YS+ V+++SF+D ++ P+GW++W G   ++ L+YAEF 
Sbjct: 417 ELGDATSNYNGIQTYLGRPWKEYSRTVYVQSFMDGLIDPKGWNEWSGDFALSTLYYAEFA 476

Query: 188 NRGPGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGL 233
           N GPG++ + RVTW G+H++D++  + F++  FI G  WLP TGVPF+ GL
Sbjct: 477 NWGPGSNTNNRVTWEGYHLIDEKDALDFTVKKFIQGDKWLPTTGVPFKAGL 527

[Close]
BLAST of Lsi02G004460 vs. TAIR10
Match: AT4G02330.1 (AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 224.9 bits (572), Expect = 5.0e-59
Identity = 98/230 (42.61%), Postives = 146/230 (63.48%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V   NF+A ++TF N+ G +   AVA+      + +Y C F   QDTLY     QF++EC
Sbjct: 344 VTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYREC 403

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYAR--MSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           DIYGTVDFIFGN  V+FQDCN+Y R  M NQ   +T Q +      +G +  NCT+  + 
Sbjct: 404 DIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPAD 463

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++ ++   V  YLGRPW++YS+ VFM+S++D++V P GW +W G   ++ L+YAE+NN G
Sbjct: 464 DLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTG 523

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
            G+  + RV W G+HV++      F+++NF+ G  W+ ++GVP+  GLLS
Sbjct: 524 SGSSTTDRVVWPGYHVINSTDANNFTVENFLLGDGWMVQSGVPYISGLLS 573

[Close]
BLAST of Lsi02G004460 vs. TAIR10
Match: AT1G02810.1 (AT1G02810.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 222.6 bits (566), Expect = 2.5e-58
Identity = 96/230 (41.74%), Postives = 146/230 (63.48%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V   NF+A ++TF N+ G +   AVA+     ++ +Y C F   QDTLY     QF++EC
Sbjct: 350 VTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYREC 409

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYAR--MSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           D+YGTVDFIFGN  V+FQ+CN+Y R  M NQ   +T Q +      +G + QNCT+  + 
Sbjct: 410 DVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPAD 469

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++ ++   V  YLGRPW++YS+ V+M+S++D  V P GW +W G   ++ L+YAE+NN G
Sbjct: 470 DLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTG 529

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           PG++ + RVTW G+HV++      F++      +DW+ +TGVP+  GL+S
Sbjct: 530 PGSNTTNRVTWPGYHVINSTDAANFTVTGLFIEADWIWKTGVPYTSGLIS 579

[Close]
BLAST of Lsi02G004460 vs. TAIR10
Match: AT3G10720.2 (AT3G10720.2 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 222.2 bits (565), Expect = 3.3e-58
Identity = 98/230 (42.61%), Postives = 151/230 (65.65%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V G+ F+A  +TF N+ G +   AVA+ +  + +++Y+C F G QDTLYV    QF++EC
Sbjct: 388 VVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYREC 447

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYAR--MSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           DIYGTVDFIFGN   +FQ+CNIYAR  M+ Q   +T   +      +G +  NCT+  + 
Sbjct: 448 DIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAP 507

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++AA   +   +LGRPW+ YS+ VFM+S++ D+V P GW +W G + ++ ++Y E++N G
Sbjct: 508 DLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFG 567

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           PGA+ ++RV W G+++L+    + F++ NF  G  WLP+T +PF  GLLS
Sbjct: 568 PGANTNQRVQWLGYNLLNLAEAMNFTVYNFTMGDTWLPQTDIPFYGGLLS 617

[Close]
BLAST of Lsi02G004460 vs. TAIR10
Match: AT2G47550.1 (AT2G47550.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 94/230 (40.87%), Postives = 141/230 (61.30%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           ++G NF+  ++T  N+ G   G AVA+      + +Y C F   QDTLY     QF++EC
Sbjct: 331 LSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYREC 390

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYARM--SNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 127
           D+YGTVDFIFGN  V+ Q+CN+Y R     QS  VT Q +      +G     CT+  + 
Sbjct: 391 DVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPAD 450

Query: 128 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPG-VTMNNLFYAEFNNRG 187
           ++A +   V  YLGRPW++YS+ V M++++D  + P GW+ W G   ++ L+YAE+NN G
Sbjct: 451 DLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTG 510

Query: 188 PGADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           PG+D + RVTW G+HV++      F++ NF+ G  W+ +TGVPF  GL++
Sbjct: 511 PGSDTTNRVTWPGYHVINATDASNFTVTNFLVGEGWIGQTGVPFVGGLIA 560

[Close]
BLAST of Lsi02G004460 vs. TAIR10
Match: AT4G02300.1 (AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-55
Identity = 100/233 (42.92%), Postives = 145/233 (62.23%), Query Frame = 1 

Query: 3   TKYIPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQ 62
           T  + V G  ++A+ ++F NS G     AVA      ++A+Y+C F G QDTLYV    Q
Sbjct: 299 TPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQ 358

Query: 63  FFKECDIYGTVDFIFGNGLVMFQDCNIYARMSN--QSITVTTQSKEASTAMSGFTFQNCT 122
           F++ECDIYGT+DFIFGN  V+FQ+ ++YAR  N    I  T QS+  S   +G +  NC 
Sbjct: 359 FYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCR 418

Query: 123 VTVSSEIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKW-PGVTMNNLFYAE 182
           +  + ++   K N   YLGRPWR+YS+ V ++SF+DD++ P GW +      +  L+Y E
Sbjct: 419 ILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGE 478

Query: 183 FNNRGPGADVSKRVTWTGFHVLDKQS-TIQFSIDNFINGSDWLPETGVPFRRG 232
           + N GPGA+++KRVTW GF  ++ Q+   QF++  FI+GS WL  TG+PF  G
Sbjct: 479 YMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531

[Close]
BLAST of Lsi02G004460 vs. NCBI nr
Match: gi|659068777|ref|XP_008446175.1| (PREDICTED: pectinesterase 2-like [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 1.1e-103
Identity = 181/229 (79.04%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 6   IPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFK 65
           + VNG+NFLA+SLTFENS G QNG AVAVLD   +TAY+KC+FLG QDTLYVKG  QFFK
Sbjct: 71  LTVNGNNFLAKSLTFENSAGPQNGQAVAVLDQAHFTAYHKCKFLGFQDTLYVKGT-QFFK 130

Query: 66  ECDIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 125
           EC+IYG+VDFIFGNGLVMFQDCNIYAR  N+ ITVT QSKE    +SGF+FQNCTVTVSS
Sbjct: 131 ECEIYGSVDFIFGNGLVMFQDCNIYAREPNRPITVTAQSKEQPKEVSGFSFQNCTVTVSS 190

Query: 126 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGP 185
           EIA NKANV +YLGRPWRQYS+VVFMESFLDD VVPEGWS+WPGV +NNLFYAEFNNRGP
Sbjct: 191 EIAVNKANVKIYLGRPWRQYSKVVFMESFLDDEVVPEGWSEWPGVPVNNLFYAEFNNRGP 250

Query: 186 GADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           GADVSKRV WTGF VLDKQS  QF++DNF+NGS WLPETG+PFR GL S
Sbjct: 251 GADVSKRVHWTGFRVLDKQSAYQFTVDNFVNGSKWLPETGIPFRDGLFS 298

[Close]
BLAST of Lsi02G004460 vs. NCBI nr
Match: gi|659068775|ref|XP_008446163.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 5.5e-100
Identity = 173/229 (75.55%), Postives = 194/229 (84.72%), Query Frame = 1 

Query: 6   IPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFK 65
           + VNGDNF+A+SLTFENS G QNG AVAVLD  ++TAY+KCRFLG QDTLYV G+  FFK
Sbjct: 81  LTVNGDNFIAKSLTFENSAGPQNGQAVAVLDQARFTAYHKCRFLGFQDTLYVGGKSHFFK 140

Query: 66  ECDIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 125
           ECD+YGTVDFIFGNGL MFQDCNIYAR  N+ ITVT QSKE     SGF+FQNCTVTVSS
Sbjct: 141 ECDVYGTVDFIFGNGLTMFQDCNIYAREPNRPITVTAQSKEQLHEESGFSFQNCTVTVSS 200

Query: 126 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGP 185
           EI A+KANV +YL RPWRQYS+VVFMESFLD+ V+PEGWS+WPGV  NNLFY EFNNRGP
Sbjct: 201 EIVASKANVKIYLDRPWRQYSRVVFMESFLDEEVLPEGWSEWPGVPTNNLFYGEFNNRGP 260

Query: 186 GADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           GADVSKRV W GFH+L+KQ   QF+IDNF+NGS WLPETG+PFRRG  S
Sbjct: 261 GADVSKRVHWIGFHLLNKQLANQFTIDNFVNGSYWLPETGIPFRRGFFS 309

[Close]
BLAST of Lsi02G004460 vs. NCBI nr
Match: gi|778708428|ref|XP_011656190.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 2.1e-99
Identity = 175/229 (76.42%), Postives = 197/229 (86.03%), Query Frame = 1 

Query: 6   IPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFK 65
           + VNG+NFLAQSLTF+NS G QNG AVAVLD   +T YYKCRFLG QDTLYV+G+ QFFK
Sbjct: 81  LTVNGNNFLAQSLTFKNSAGPQNGQAVAVLDEAHFTTYYKCRFLGFQDTLYVRGKPQFFK 140

Query: 66  ECDIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 125
           ECDIYG+VDFIFG+GLVMFQDCNIYAR  N+SIT+T QSK+     SGF+FQNCT+T+SS
Sbjct: 141 ECDIYGSVDFIFGDGLVMFQDCNIYAREPNRSITITAQSKKQLHEESGFSFQNCTITISS 200

Query: 126 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGP 185
           EIAANKA+V +YLGRPWRQYSQVVFMESFLD  V+P+GW KW GV +NNLFY EFNNRGP
Sbjct: 201 EIAANKADVKIYLGRPWRQYSQVVFMESFLDKEVMPKGWLKWSGVPLNNLFYGEFNNRGP 260

Query: 186 GADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           GADVSKR+  TGFHVLDKQS  QF+I NF+NGSDWLPETGVPFR GL S
Sbjct: 261 GADVSKRIHCTGFHVLDKQSANQFTI-NFVNGSDWLPETGVPFRSGLFS 308

[Close]
BLAST of Lsi02G004460 vs. NCBI nr
Match: gi|659131231|ref|XP_008465578.1| (PREDICTED: pectinesterase 2-like, partial [Cucumis melo])

HSP 1 Score: 359.4 bits (921), Expect = 4.8e-96
Identity = 166/227 (73.13%), Postives = 193/227 (85.02%), Query Frame = 1 

Query: 8   VNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFKEC 67
           V GDNF+A+SLTFENS G QNG AVAV D   +TAYYKCRFLG QDTLYV G+ QFFKE 
Sbjct: 1   VQGDNFMAKSLTFENSAGPQNGQAVAVFDKADHTAYYKCRFLGFQDTLYVNGKYQFFKES 60

Query: 68  DIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSSEI 127
           +IYG+VDFIFG+G VMFQDCNIYARM + SITVT QSK+   ++SGF+FQNCTVTVS EI
Sbjct: 61  NIYGSVDFIFGHGRVMFQDCNIYARMPSNSITVTAQSKDFLRSISGFSFQNCTVTVSPEI 120

Query: 128 AANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGPGA 187
           ++NK NV V+LGRPWRQYS VVFMESFLDD+V  EGW +W GV +NNLFY EFNN GPGA
Sbjct: 121 SSNKQNVKVFLGRPWRQYSNVVFMESFLDDVVASEGWMEWKGVPVNNLFYGEFNNFGPGA 180

Query: 188 DVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           DVSKRV WTG+H+LDK+S I F++DNFI+GS+WL ETG+PFRRGLL+
Sbjct: 181 DVSKRVNWTGYHLLDKKSAIGFTVDNFIDGSEWLAETGIPFRRGLLT 227

[Close]
BLAST of Lsi02G004460 vs. NCBI nr
Match: gi|778657958|ref|XP_004152582.2| (PREDICTED: pectinesterase 2-like [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 5.0e-93
Identity = 162/229 (70.74%), Postives = 189/229 (82.53%), Query Frame = 1 

Query: 6   IPVNGDNFLAQSLTFENSTGAQNGPAVAVLDYVQYTAYYKCRFLGLQDTLYVKGQLQFFK 65
           + V GDNF+A+SLTFENS G QN  AVAV D   +TAYYKCRFL  QDTLYV G+ QFFK
Sbjct: 108 LTVQGDNFMAESLTFENSAGPQNNQAVAVFDKANHTAYYKCRFLSFQDTLYVNGKPQFFK 167

Query: 66  ECDIYGTVDFIFGNGLVMFQDCNIYARMSNQSITVTTQSKEASTAMSGFTFQNCTVTVSS 125
           E DIYG+VDFI G G VMFQDCNIYARM   SITVT QSK    ++SGF+FQNCTVTVS 
Sbjct: 168 ESDIYGSVDFICGYGQVMFQDCNIYARMPINSITVTAQSKYILRSVSGFSFQNCTVTVSR 227

Query: 126 EIAANKANVYVYLGRPWRQYSQVVFMESFLDDMVVPEGWSKWPGVTMNNLFYAEFNNRGP 185
           EI++NK NV V+LGRPW+QYS+VVFMESFLDD+V  EGW +W GV +NNLFY EFNN GP
Sbjct: 228 EISSNKQNVKVFLGRPWKQYSKVVFMESFLDDVVASEGWVEWIGVPVNNLFYGEFNNCGP 287

Query: 186 GADVSKRVTWTGFHVLDKQSTIQFSIDNFINGSDWLPETGVPFRRGLLS 235
           GADVSKRV WT +H+LDK+S ++F++DNF+NGS+WLPETG+PFRRGL S
Sbjct: 288 GADVSKRVNWTSYHLLDKESALRFTVDNFVNGSEWLPETGIPFRRGLHS 336

The following BLAST results are available for this feature:
BLAST of Lsi02G004460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PME2_CITSI1.1e-6046.52Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1[more]
PME41_ARATH8.9e-5842.61Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=P... [more]
PME7_ARATH4.4e-5741.74Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PM... [more]
PME25_ARATH5.8e-5742.61Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=P... [more]
PME20_ARATH3.2e-5540.87Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=P... [more]
BLAST of Lsi02G004460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR14_CUCSA3.5e-9370.74Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1[more]
A0A0A0L1M3_CUCSA6.4e-7960.79Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1[more]
W9R0V2_9ROSA1.7e-6351.56Pectinesterase OS=Morus notabilis GN=L484_012494 PE=4 SV=1[more]
B9GPD9_POPTR4.6e-6148.68Pectinesterase OS=Populus trichocarpa GN=POPTR_0002s14640g PE=4 SV=1[more]
V7BGJ7_PHAVU2.3e-6046.32Pectinesterase OS=Phaseolus vulgaris GN=PHAVU_007G198200g PE=4 SV=1[more]
BLAST of Lsi02G004460 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02330.15.0e-5942.61 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT1G02810.12.5e-5841.74 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT3G10720.23.3e-5842.61 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT2G47550.11.8e-5640.87 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT4G02300.12.0e-5542.92 Plant invertase/pectin methylesterase inhibitor superfamily[more]
BLAST of Lsi02G004460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068777|ref|XP_008446175.1|1.1e-10379.04PREDICTED: pectinesterase 2-like [Cucumis melo][more]
gi|659068775|ref|XP_008446163.1|5.5e-10075.55PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo][more]
gi|778708428|ref|XP_011656190.1|2.1e-9976.42PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus][more]
gi|659131231|ref|XP_008465578.1|4.8e-9673.13PREDICTED: pectinesterase 2-like, partial [Cucumis melo][more]
gi|778657958|ref|XP_004152582.2|5.0e-9370.74PREDICTED: pectinesterase 2-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR000070Pectinesterase_cat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0045490 pectin catabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
cellular_component GO:0005618 cell wall
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0030599 pectinesterase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G004460.1Lsi02G004460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000070Pectinesterase, catalyticPFAMPF01095Pectinesterasecoord: 4..217
score: 2.2
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 5..230
score: 1.63
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 6..229
score: 1.2
NoneNo IPR availablePANTHERPTHR31707FAMILY NOT NAMEDcoord: 8..234
score: 8.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G004460Csa1G049450Cucumber (Chinese Long) v2culsiB022
Lsi02G004460CSPI01G09010Wild cucumber (PI 183967)cpilsiB021
Lsi02G004460Cucsa.391560Cucumber (Gy14) v1cgylsiB633
Lsi02G004460Cla002569Watermelon (97103) v1lsiwmB184
Lsi02G004460MELO3C002317Melon (DHL92) v3.5.1lsimeB179
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G004460Wax gourdlsiwgoB240
Lsi02G004460Cucurbita maxima (Rimu)cmalsiB202
Lsi02G004460Cucurbita maxima (Rimu)cmalsiB370
Lsi02G004460Cucurbita moschata (Rifu)cmolsiB192
Lsi02G004460Cucurbita moschata (Rifu)cmolsiB356
Lsi02G004460Cucurbita pepo (Zucchini)cpelsiB026
Lsi02G004460Cucurbita pepo (Zucchini)cpelsiB423
Lsi02G004460Watermelon (Charleston Gray)lsiwcgB184
Lsi02G004460Cucumber (Gy14) v2cgyblsiB018
Lsi02G004460Melon (DHL92) v3.6.1lsimedB189
Lsi02G004460Silver-seed gourdcarlsiB447
Lsi02G004460Silver-seed gourdcarlsiB918
Lsi02G004460Cucumber (Chinese Long) v3cuclsiB022
Lsi02G004460Watermelon (97103) v2lsiwmbB176