Lsi02G004430 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATTCTTGATCCAACAATTTGTTGCATATTTATGTATTCTTGTATGCATGAACTTTATTGTACCCGTTTGTAGCATTATTTTTAATACTATTGTATCGTTAGATGGAAGCGGAGATTTTATAAGTATTAGTGCTGCGATTGCTGCTGCACCAAACAATAGCAAGTCGAGATTTTACATTTATGTGAAACCTGGAATATATAGGGAGCACGTTGAAATTGAAAGTCATAAAACTTTCATAGCATTAATTGGGGATAATGCAGCCACGACTATGATGGTTGATAATAGGAGCAATGGCAGTGGTTTTGCAACCTCCCAATCCGCCACTTTTGGTAAGCTTGAAGTACCCATCTTTTTTTCTTTTTTTTTTTACTCAATTTGTTCATTTCAAGCTGAAAAAAAAAAATACTCTTTTAGTTCCTATGATTTGAGTCCAATTTCTATTTGGTCATAGGTTTCAATTGCTACCTTTTTCCCTTAATATTGAGTTTGATTTTCTTTTGGTTTCTAGATTTCAAAATGTTACGTTTTTATTCATCTTGAGTTTTGAGTTTTGTTCATTTTGTCCATAAGTTTCATGATTTATACATTTACCCTTGATTTTTCAGACATTTTGTCCTTGGTATTAATTCGTATTATTGAATTTAGAATAATTAAATTAATTTCAATTAAACTAGTTTTCACTAATTTTCCATTACTATAAATTATTTTAATTAATAAGTTGAAATTTAACACCAAATACAAAAAAAAAAAAATGATGTTTAGAGAAAACTCGGTAGAAGTTTATAAAATATTGAAACCTAGAACCAAATGGAAGTATTAAACTTAAAACTCAAAGGATACGTAAAAATGTAACTGTGAGAACTTGGGGATCAAATGGAAATTAAACTAAAATCTCATAAGTAAAAGGTGTAATATTTTTAAAATCTAGGGACCAAAGGTATATTTTTTTTCTTTCGAATTATATTAATTATAATGTTGAATTTTTTGATATTTTCTTTGTAGTTGTGAAGGGTAACAACTTTATGGCACAGTTCATAACGTTTCAAAATTCTGCTGGACCTGGAAATGCCCAAGCAGTTGCTCTTCTAAATGACAACACCCAAACAACATACTTCAAGTGTGTTTTTTTAGGATACCAAGACACACTTTCTGTAAATGGAAAGCAATTGTTCTTTAAAGATTGTGAAATCTATGGAACTGTAGATTTTATATTTGGGAATGGACTTGCTGTATTTCAAGATTGCAAAATATATGCACGGTTCCCAAATAATAATACAGTTACCATCACTGCACAATCTACAAATTCACCCGACCAATACAGTGGCTTTTCCTTTCAAAACTGCATTGTCATGACCTCTCTTGAATTTGTGTCAAGAAAGGTAAATAAGTTCGAAGTCTATCTTGGTCGTCCTTGGAGAGATTATTCAACTGTAATATTCATGCAATCATTTATGGACTCGATAGTCAATCCTGCAGGATGGTTAGCATGGTCGGCCGAGAGGCCTCTAAACTTATTATTTTATGCAGAGTTTAACAACACAGGTCCAGGAGCTGATACATCTAAAAGAGCTAAATGGTTAGGCATCCGTATAATAAATAATCCAATGGAAGCCTCTAAATTTACCGTGAGAAATTTCATTAATGGAGCCATGTGGTTACCAGAAACTAATGTACCATTTAGACCAGATTTGTAGTTTGTATATGTATTTCTTTAAAATATATATATATATACACGCGCGCGCGCGACTTGAATGAATTTTAAGTCCTTGGCATCGCAAGCTTCTCCTTTTAATTTCTCATTTCAAATTTCTAAAGAAAACGTGTTTTTTACCAAGTAAAAGTATAGAGAAAAGCAATGTTTCCTAGTCGAGTTTACTAAATAACATTTAGTGAATTCTAGTTAAATTTTAAAAATAAAAACAAGTCTTTAATGATAAATTTTAAAAACAAAAAGAAGTTTTTAATGATTTTTTTTAAAAAAATTTAGCTTAGATTTTGAAAATTACTCTCCTAAAATGTAGAAAAAAAAATAACAAAGTGATTTTAAGTTGAACTAGTGTTTGTTAGGCTTAATTTTCAAAAACTAAATACTAAAAGTTAAGATCCGGTTATAGACTATTTGGATTGAGAGAAATAAGCATACGTTTTAGTGACAACTTCAATAGTAACACAAAGCTTTGGGAGGATATTTGCTCCTTGGACAGGATGTTAGTCATATTGATCAAAGCTTTTTAAAGATTCAACCCTTCCTCCATTACTCTCAATCTTGTTGCTTTCATGTAATTCTTTTTTTTTTCTTTAAACAAAATACTAGAGGGAGAAGGTTTAGGAGTGCACTGGGACATCTCAACTAGGTTGACACATCCTTACCACACTCATCATGACCCGGATCCAAAAGCGGTAAAGTTCTTGAACATCGAAGGGCAAGAGAGAAGCCCAGAATATACAAAAGACAATGGAGGAATAAGCTATTGGAAAACCTTCCAATTTAAAACAATAGTAGATGTAGCTGCTTTTATGTAATTCAACTTTCCAATTGTAGGCTTCTCTCTAGCCCTTCTCTTGTACTGTCTTTTTGGACTCTCGGTTCTTATTGAATATTAATGAAGAGACGTGGGATATGATGAGTGTGCTAAAAATGTGTCAAACCTAGTTGAGATATTCTTGTGCACCTACTGACCCACATTACATATCTTTTTTTTAAAAAAAAAAAAAAAAAATTTAAGGTCTCGTTTGGTAACCATTTAATCTTTTATTTTTGGTTTAAAAATTAAGTGATCTATCTCCTCTCAATTTCTTAAAATGTTTTACATTTTTCTTAAATAAAAGAGTTGAATTCTTAGCCAAATTCCAGAAACAAAAGCAAGTTTTTAAAAATTAGCTTTTTGAGTTTTTCAAATTTAGCTTGATTCTTTAAAACATTAGTAAAATAGGATAAGAAAACAAAAAATTTACAAGTATAAATGGTGTATATAGGCTTAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTAAATAGTTATTAAATGAGGTCTAAATTGGTTATCAAATTTGTTTATTCAGAAAAAAGATAACCTTAAATTTCTGCATCTACTTTTATACATGCTACGTTTTTTTTTTTTTTAAGTAAAACTTGGGGTTATCATTATTGCATTGCGAGGATATAACACTTGTTCCGGTCGCCTAGTGTTCAAACTCAAGGTTTTTTTTTTTTAATACTAAAAAATTAGGATATCTTACCTTTCAATTATATATAGTGTAAATCTTAGTTTAGTACCAAACCTTATGTTTATTATGTAACACCCAACTTTAAGAAGATTATAGGAATGAATCGAGATCACATATAAATGAGAAGGGTCTTGAGAATATTCAGGCATGGTTAAGAAATACTTTAAAGAATTGCATCAAGGTGTAACTTCATTTTCAATGGCTCAATCATAAAAACTGTAAAGTTTAGCGTGCTTAATTTGAAGTAATCTTATGTTAGGTGACCTCTTGGAAATTTTTAATTTTCAAAGTATATTGTCATGTTGAAAGGACTTGTATTGGTTTGTAAGGAAGTTTACACTCTTAGAAGCAGTTTTCATTTCTCTATAGATTTGAAAAGATTTTATTATTAGTTGTATCTTTTTCTTAAATCGAAGATTTCGTTGTGAACACCCTATTATAAAAGGGTCACCATACTTCGTCACAAATGAATGAAGAAAACATAAATTGAAAACTAAGGTCTCGTTTGGTAACCATTTTATTTTTGTTTTTTGTTTTTTAAAATTAAGCCTATAGACATTACTTCTACCTCTAAATTTCTTTCTTTGTTGTCTAGCTTTTAACATTAGTTTAAAAAACCAACCCAAAAATAAGAAATGAAATGATTACTAAACGGGCCGAAATTGCTTATCGTATTTCCAAGAAGAAAATATTTTTCTAGAGATTATTAATAAGAAATAAATATATAAACTTACGGTAATTGAACAATAAAACCGTATTCATCCGTTGATCCAATTTACTAAACAAGACATTTATTACTTTTTCTTTTTAAAATTTTATGATAATTAACCTTCCACATTCGCTGAATAAGAAAAATAATAACGTATTAACGCTTAAGATAATCAAAATTCAGTTTTAAAATATTAATTATGTTTTATTTCTCACAAATGCCATTATTAGCTTTGCAAATAAACCTTTAGAGGAATCAGCCGTAGTTGTTTTAGTATAATAAATAAATATCATTATATTACCTCTATTTTGTAGATTGAAATTGAAAAGAGAGTAAGAAAAAAAAACTTGACCATAACACAATGATGACGGTGGAGAAACTATATGGTGTGATTCTTGTTTTTGTTTTTAGCAGTTTGTGTTTCATTAATCAAACAGCAGCTTCAAATAATTTTGTCACATATACTTGTGCGAAACATCAACAATTGAGCAAACTATGCATTGCTGTGATAGATTCCGATCCTCACCAACATCTAAAATTCAATTTGCAAGGGCTATTAGCCATTTTCATAAACCATTCTATCGCCAATACCACAAATAATCTTCACTACCTTTTAGACCAGATCAAGAAACCAGAGTTAGACAACAAGACACGAGAAATCTTCAATAGTTGCGTTGATCAATACAATAGGTGCACAAATATTTTGACATCATCGTTACAAGAATTGACAAAGAACCACGGTAAGATAGAGTTGGGTTTGAGTATGACAGATGCATACGATAGGATTGAAGGTTGTGAATTTGAATTTTCGGATACAACTGAACCGTCAGTTTGGTTGTCTCGTTATCTTAACTTACGTCAACTTTTAACCCTTTCGATGGGGACTGCAAATCTCTTACAATGTAACAAAGTTGCTGCTTGTATTCCATAG ATGGCATTCTTGATCCAACAATTTGTTGCATATTTATGTATTCTTGTATGCATGAACTTTATTGTACCCGTTTGTAGCATTATTTTTAATACTATTGTATCGTTAGATGGAAGCGGAGATTTTATAAGTATTAGTGCTGCGATTGCTGCTGCACCAAACAATAGCAAGTCGAGATTTTACATTTATGTGAAACCTGGAATATATAGGGAGCACGTTGAAATTGAAAGTCATAAAACTTTCATAGCATTAATTGGGGATAATGCAGCCACGACTATGATGGTTGATAATAGGAGCAATGGCAGTGGTTTTGCAACCTCCCAATCCGCCACTTTTGTTGTGAAGGGTAACAACTTTATGGCACAGTTCATAACGTTTCAAAATTCTGCTGGACCTGGAAATGCCCAAGCAGTTGCTCTTCTAAATGACAACACCCAAACAACATACTTCAAGTGTGTTTTTTTAGGATACCAAGACACACTTTCTGTAAATGGAAAGCAATTGTTCTTTAAAGATTGTGAAATCTATGGAACTGTAGATTTTATATTTGGGAATGGACTTGCTGTATTTCAAGATTGCAAAATATATGCACGGTTCCCAAATAATAATACAGTTACCATCACTGCACAATCTACAAATTCACCCGACCAATACAGTGGCTTTTCCTTTCAAAACTGCATTGTCATGACCTCTCTTGAATTTGTGTCAAGAAAGGTAAATAAGTTCGAAGTCTATCTTGGTCGTCCTTGGAGAGATTATTCAACTGTAATATTCATGCAATCATTTATGGACTCGATAGTCAATCCTGCAGGATGGTTAGCATGGTCGGCCGAGAGGCCTCTAAACTTATTATTTTATGCAGAGTTTAACAACACAGGTCCAGGAGCTGATACATCTAAAAGAGCTAAATGTTTGTGTTTCATTAATCAAACAGCAGCTTCAAATAATTTTGTCACATATACTTGTGCGAAACATCAACAATTGAGCAAACTATGCATTGCTGTGATAGATTCCGATCCTCACCAACATCTAAAATTCAATTTGCAAGGGCTATTAGCCATTTTCATAAACCATTCTATCGCCAATACCACAAATAATCTTCACTACCTTTTAGACCAGATCAAGAAACCAGAGTTAGACAACAAGACACGAGAAATCTTCAATAGTTGCGTTGATCAATACAATAGGTGCACAAATATTTTGACATCATCGTTACAAGAATTGACAAAGAACCACGGTAAGATAGAGTTGGGTTTGAGTATGACAGATGCATACGATAGGATTGAAGGTTGTGAATTTGAATTTTCGGATACAACTGAACCGTCAGTTTGGTTGTCTCGTTATCTTAACTTACGTCAACTTTTAACCCTTTCGATGGGGACTGCAAATCTCTTACAATGTAACAAAGTTGCTGCTTGTATTCCATAG ATGGCATTCTTGATCCAACAATTTGTTGCATATTTATGTATTCTTGTATGCATGAACTTTATTGTACCCGTTTGTAGCATTATTTTTAATACTATTGTATCGTTAGATGGAAGCGGAGATTTTATAAGTATTAGTGCTGCGATTGCTGCTGCACCAAACAATAGCAAGTCGAGATTTTACATTTATGTGAAACCTGGAATATATAGGGAGCACGTTGAAATTGAAAGTCATAAAACTTTCATAGCATTAATTGGGGATAATGCAGCCACGACTATGATGGTTGATAATAGGAGCAATGGCAGTGGTTTTGCAACCTCCCAATCCGCCACTTTTGTTGTGAAGGGTAACAACTTTATGGCACAGTTCATAACGTTTCAAAATTCTGCTGGACCTGGAAATGCCCAAGCAGTTGCTCTTCTAAATGACAACACCCAAACAACATACTTCAAGTGTGTTTTTTTAGGATACCAAGACACACTTTCTGTAAATGGAAAGCAATTGTTCTTTAAAGATTGTGAAATCTATGGAACTGTAGATTTTATATTTGGGAATGGACTTGCTGTATTTCAAGATTGCAAAATATATGCACGGTTCCCAAATAATAATACAGTTACCATCACTGCACAATCTACAAATTCACCCGACCAATACAGTGGCTTTTCCTTTCAAAACTGCATTGTCATGACCTCTCTTGAATTTGTGTCAAGAAAGGTAAATAAGTTCGAAGTCTATCTTGGTCGTCCTTGGAGAGATTATTCAACTGTAATATTCATGCAATCATTTATGGACTCGATAGTCAATCCTGCAGGATGGTTAGCATGGTCGGCCGAGAGGCCTCTAAACTTATTATTTTATGCAGAGTTTAACAACACAGGTCCAGGAGCTGATACATCTAAAAGAGCTAAATGTTTGTGTTTCATTAATCAAACAGCAGCTTCAAATAATTTTGTCACATATACTTGTGCGAAACATCAACAATTGAGCAAACTATGCATTGCTGTGATAGATTCCGATCCTCACCAACATCTAAAATTCAATTTGCAAGGGCTATTAGCCATTTTCATAAACCATTCTATCGCCAATACCACAAATAATCTTCACTACCTTTTAGACCAGATCAAGAAACCAGAGTTAGACAACAAGACACGAGAAATCTTCAATAGTTGCGTTGATCAATACAATAGGTGCACAAATATTTTGACATCATCGTTACAAGAATTGACAAAGAACCACGGTAAGATAGAGTTGGGTTTGAGTATGACAGATGCATACGATAGGATTGAAGGTTGTGAATTTGAATTTTCGGATACAACTGAACCGTCAGTTTGGTTGTCTCGTTATCTTAACTTACGTCAACTTTTAACCCTTTCGATGGGGACTGCAAATCTCTTACAATGTAACAAAGTTGCTGCTTGTATTCCATAG MAFLIQQFVAYLCILVCMNFIVPVCSIIFNTIVSLDGSGDFISISAAIAAAPNNSKSRFYIYVKPGIYREHVEIESHKTFIALIGDNAATTMMVDNRSNGSGFATSQSATFVVKGNNFMAQFITFQNSAGPGNAQAVALLNDNTQTTYFKCVFLGYQDTLSVNGKQLFFKDCEIYGTVDFIFGNGLAVFQDCKIYARFPNNNTVTITAQSTNSPDQYSGFSFQNCIVMTSLEFVSRKVNKFEVYLGRPWRDYSTVIFMQSFMDSIVNPAGWLAWSAERPLNLLFYAEFNNTGPGADTSKRAKCLCFINQTAASNNFVTYTCAKHQQLSKLCIAVIDSDPHQHLKFNLQGLLAIFINHSIANTTNNLHYLLDQIKKPELDNKTREIFNSCVDQYNRCTNILTSSLQELTKNHGKIELGLSMTDAYDRIEGCEFEFSDTTEPSVWLSRYLNLRQLLTLSMGTANLLQCNKVAACIP
BLAST of Lsi02G004430 vs. Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.3e-67 Identity = 123/278 (44.24%), Postives = 185/278 (66.55%), Query Frame = 1
BLAST of Lsi02G004430 vs. Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 5.6e-67 Identity = 126/279 (45.16%), Postives = 184/279 (65.95%), Query Frame = 1
BLAST of Lsi02G004430 vs. Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 9.5e-67 Identity = 121/273 (44.32%), Postives = 181/273 (66.30%), Query Frame = 1
BLAST of Lsi02G004430 vs. Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.6e-66 Identity = 132/292 (45.21%), Postives = 185/292 (63.36%), Query Frame = 1
BLAST of Lsi02G004430 vs. Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 2.8e-66 Identity = 125/274 (45.62%), Postives = 176/274 (64.23%), Query Frame = 1
BLAST of Lsi02G004430 vs. TrEMBL
Match: A0A0A0L1M3_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.9e-85 Identity = 169/293 (57.68%), Postives = 215/293 (73.38%), Query Frame = 1
BLAST of Lsi02G004430 vs. TrEMBL
Match: A0A0A0LR14_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.0e-83 Identity = 166/294 (56.46%), Postives = 207/294 (70.41%), Query Frame = 1
BLAST of Lsi02G004430 vs. TrEMBL
Match: A0A0D9V073_9ORYZ (Pectinesterase OS=Leersia perrieri PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 3.8e-70 Identity = 138/292 (47.26%), Postives = 188/292 (64.38%), Query Frame = 1
BLAST of Lsi02G004430 vs. TrEMBL
Match: A0A067K7G1_JATCU (Pectinesterase OS=Jatropha curcas GN=JCGZ_13961 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70 Identity = 132/297 (44.44%), Postives = 197/297 (66.33%), Query Frame = 1
BLAST of Lsi02G004430 vs. TrEMBL
Match: B0L3S3_TAICR (Pectinesterase OS=Taiwania cryptomerioides PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 2.4e-69 Identity = 134/281 (47.69%), Postives = 185/281 (65.84%), Query Frame = 1
BLAST of Lsi02G004430 vs. TAIR10
Match: AT4G02300.1 (AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 256.5 bits (654), Expect = 3.2e-68 Identity = 126/279 (45.16%), Postives = 184/279 (65.95%), Query Frame = 1
BLAST of Lsi02G004430 vs. TAIR10
Match: AT1G02810.1 (AT1G02810.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 255.0 bits (650), Expect = 9.2e-68 Identity = 132/292 (45.21%), Postives = 185/292 (63.36%), Query Frame = 1
BLAST of Lsi02G004430 vs. TAIR10
Match: AT3G05620.1 (AT3G05620.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 254.2 bits (648), Expect = 1.6e-67 Identity = 125/274 (45.62%), Postives = 176/274 (64.23%), Query Frame = 1
BLAST of Lsi02G004430 vs. TAIR10
Match: AT2G26440.1 (AT2G26440.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 243.8 bits (621), Expect = 2.1e-64 Identity = 119/270 (44.07%), Postives = 174/270 (64.44%), Query Frame = 1
BLAST of Lsi02G004430 vs. TAIR10
Match: AT4G33220.1 (AT4G33220.1 pectin methylesterase 44) HSP 1 Score: 243.4 bits (620), Expect = 2.8e-64 Identity = 130/292 (44.52%), Postives = 181/292 (61.99%), Query Frame = 1
BLAST of Lsi02G004430 vs. NCBI nr
Match: gi|778708551|ref|XP_011656233.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85 Identity = 169/293 (57.68%), Postives = 213/293 (72.70%), Query Frame = 1
BLAST of Lsi02G004430 vs. NCBI nr
Match: gi|700198848|gb|KGN54006.1| (hypothetical protein Csa_4G260430 [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85 Identity = 169/293 (57.68%), Postives = 215/293 (73.38%), Query Frame = 1
BLAST of Lsi02G004430 vs. NCBI nr
Match: gi|778697621|ref|XP_011654361.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85 Identity = 169/293 (57.68%), Postives = 215/293 (73.38%), Query Frame = 1
BLAST of Lsi02G004430 vs. NCBI nr
Match: gi|778708428|ref|XP_011656190.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85 Identity = 165/272 (60.66%), Postives = 199/272 (73.16%), Query Frame = 1
BLAST of Lsi02G004430 vs. NCBI nr
Match: gi|659131731|ref|XP_008465826.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo]) HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84 Identity = 159/268 (59.33%), Postives = 203/268 (75.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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