Lsi02G000320 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGTGTCTTCTTGAGGTTCCTTGCGTTGAGAAAATGTTAAATTTCAATTTTTACCTTCTGTTGAAGTATATGTGAGTTTACTTTCGTTGGTTAAAATCAGAAGGAATGGTGTTTCTCACCATTTTTTCCCAACAATATGATAGTGTACAAAACTGCAAATAAGAAAATGCTAATGAAATACCATTACCATTAATGAAATTACCATACTTTACAGGACTTTTTGGTTTTGACATTTGCAGATAATATTGATTTTAGGCGACATGAGTTCAAGATTGATTTGAAATTACTTTTTAGGGAGATGGAGACATGATTTGAGTCTTGAGATGATTGTTATTAACCTTTTATTTTTTTTTTTGGAAGAATTTGCTTTGTTTTAGTTGGTGTGGTGGAGATTTTGCTAATTTCAATCTACTTTTGACAGTTTCCTAATTTTCTTAACTTACAATTTGATGCAGTTGATTTGACTTCTATTTTTGAAGTCAGGTCAAGTTGGGTTAATCATCATTCATCGCTTAAATGGGAGTGTACTTGTTCAAGTGTACATTAGCTTCCATTCCAAATCATTATTTAACAATGATTTTGCTATGCCCAAAAAAAAAAAAAAAAAAAAAAAATCTGCTAGTAAAAGTAGAATTAGAAAAATTAATTAATTTTAAATTCTGTAAAAAGAAAACATAACAAGTTTAATCTTTGGTCTCTCAACTTTTTTTTTTCTTTCTAATTCAGTCTCTCATCTTTAGGAGTTTTGTTAACTTTTTAAATTTTTAATTTGTGTCGAATATGTCATTAACCCTAAACTATCAACCATTTCTTTAATAGATACAAAATTAAAAATTTATCAAACATAATATTTTGTTTTGTTAACTTTCTAAACTTTAATTTGTGTCAAATATGCCATTGAACACTAAATTATCAACATTATCTTTAATAGATTCAAAATCGAAAGTTTATCAAATATAATATTCAATTTTAAATCTAATATAATGTTTTTTAATATTATGATCTAGACAGAAAAAAGTTTATAAAAAAAAATTATTTTATTTTTTATTTTTCTGTTTGAAGTGTTTTTAGATTTAAAATTAAATTTGAACGATTATAAAAAGTGAATAACTGGTAGTTAAAAAAGAAAGAAAGAAAAAAAGTGAAAAACTGTTATGGTTTTATAAAAGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGGTATGATTTAAATTTATCGCCCCACTGCTCTCCTCGATTCTTGCAAGGTCATTACGATTCTTCGTGATTTCTTTAATTTTTCTATCGATCTTGATATTTTCTTTAGTTCCACTTCTTCCTTTGTAACTTTTCCTTTGTCGATTTTCTGTGGATGTAGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGGTTCGTTCATTTCTCCTCTGTTTTTCCCCTGCCCTTTGAAANAAAAAAAAAAAAAAAAAAAAAAAAAATCTGCTAGTAAAAGTAGAATTAGAAAAATTAATTAATTTTAAATTCTGTAAAAAGAAAACATAACAAGTTTAATCTTTGGTCTCTCAACTTTTTTTTTTCTTTCTAATTCAGTCTCTCATCTTTAGGAGTTTTGTTAACTTTTTAAATTTTTAATTTGTGTCGAATATGTCATTAACCCTAAACTATCAACCATTTCTTTAATAGATACAAAATTAAAAATTTATCAAACATAATATTTTGTTTTGTTAACTTTCTAAACTTTAATTTGTGTCAAATATGCCATTGAACACTAAATTATCAACATTATCTTTAATAGATTCAAAATCGAAAGTTTATCAAATATAATATTCAATTTTAAATCTAATATAATGTTTTTTAATATTATGATCTAGACAGAAAAAAGTTTATAAAAAAAAATTATTTTATTTTTTATTTTTCTGTTTGAAGTGTTTTTAGATTTAAAATTAAATTTGAACGATTATAAAAAGTGAATAACTGGTAGTTAAAAAAGAAAGAAAGAAAAAAAGTGAAAAACTGTTATGGTTTTATAAAAGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGGTATGATTTAAATTTATCGCCCCACTGCTCTCCTCGATTCTTGCAAGGTCATTACGATTCTTCGTGATTTCTTTAATTTTTCTATCGATCTTGATATTTTCTTTAGTTCCACTTCTTCCTTTGTAACTTTTCCTTTGTCGATTTTCTGTGGATGTAGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGGTTCGTTCATTTCTCCTCTGTTTTTCCCCTGCCCTTTGAAAACACATCTTCAATTCAGTTTTTATGTCGTGTACTTTGATCTTTGCTAAGTTCTCTGTTCGATGATCATTGTGAATTCAAGAATCTTGATTTTCATGCAATTTTCTTGAATTATTTTCCTTGCGAGTTCCAACTATTGCTTGCGCTGACATTCTTGTACTCTAATTATAACTGATCACTTGAATTTGTTTGATTGTAAATACATATGTAAATACAAATACAGTCGTTCTTTAATAGTGACTGTAATCCAATTTATTCAATTGTTTATCACTGTTAGAGCAACTGCATGACTCTGTTTTCTTGAATCAATCAATCCACATTTCTTACGCATGTTTAAAATCACTTAGAAACAAACATGAAATTGATTTCAACCATTCCAAAATCTCGTCTCTCAAAGTTGTAGTTAGTTAAATTTTGGTTAAAATGTGGTACAGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGATTTCTTCAATTGCCGCACCGTGAACCCAATGAGCACCCACAGTGATGGAGAGACAGTGTTCCACCTGAACCAACTAGGCAGTCGCTACTTCATATGCGGCCGCCCTCAACACTGCCTCAGGGGTCTTAAGCTCCGAGTCCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCACGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCGCCCTCCTCGGTCTCCTCCCTCACCTTCTTCTCCATCTATTGAACGCCCACCAATGCCTGACCTTCCGGTGGCGCCATCGCCTTGCAGTTGTTCCGGAGTGGGCGAGATGATGATGAAAAATGTCCCAATTAACTGGTGTTTCGTGTTGCTCTTGATTATGCTTACTTTCATTCCTTGA ATGAATGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGATTTCTTCAATTGCCGCACCGTGAACCCAATGAGCACCCACAGTGATGGAGAGACAGTGTTCCACCTGAACCAACTAGGCAGTCGCTACTTCATATGCGGCCGCCCTCAACACTGCCTCAGGGGTCTTAAGCTCCGAGTCCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCACGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCGCCCTCCTCGGTCTCCTCCCTCACCTTCTTCTCCATCTATTGAACGCCCACCAATGCCTGACCTTCCGGTGGCGCCATCGCCTTGCAGTTGTTCCGGAGTGGGCGAGATGATGATGAAAAATGTCCCAATTAACTGGTGTTTCGTGTTGCTCTTGATTATGCTTACTTTCATTCCTTGA ATGAATGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGATTTCTTCAATTGCCGCACCGTGAACCCAATGAGCACCCACAGTGATGGAGAGACAGTGTTCCACCTGAACCAACTAGGCAGTCGCTACTTCATATGCGGCCGCCCTCAACACTGCCTCAGGGGTCTTAAGCTCCGAGTCCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCACGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCGCCCTCCTCGGTCTCCTCCCTCACCTTCTTCTCCATCTATTGAACGCCCACCAATGCCTGACCTTCCGGTGGCGCCATCGCCTTGCAGTTGTTCCGGAGTGGGCGAGATGATGATGAAAAATGTCCCAATTAACTGGTGTTTCGTGTTGCTCTTGATTATGCTTACTTTCATTCCTTGA MNGGKEVYVMHEIESTLSLSGSLLFHSVLLLFSPHLLLAAAFFQFEEPPSGTWSATGRTQEAIPEIWTKMEAPRPGWAVRMIIVMVITAIFFRCVTATNHSVGGSSGGKEVYVMHEIESTLSLSGSLLFHSVLLLFSPHLLLAAAFFQFEEPPSGTWSATGRTQEAIPEIWTKMEAPRPGWAVRMIIVMVITAIFFRCVTATNHSVGGSSGWDLNSNILAWSAATTFQVGDYLVFKYLPVHDVLEVNRTDFFNCRTVNPMSTHSDGETVFHLNQLGSRYFICGRPQHCLRGLKLRVQVLQRLTDANNSTHGGANQEERLRPRRPPRSPPSPSSPSIERPPMPDLPVAPSPCSCSGVGEMMMKNVPINWCFVLLLIMLTFIP
BLAST of Lsi02G000320 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.1e-15 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 1
BLAST of Lsi02G000320 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.4e-13 Identity = 54/166 (32.53%), Postives = 75/166 (45.18%), Query Frame = 1
BLAST of Lsi02G000320 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.1e-12 Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 1
BLAST of Lsi02G000320 vs. Swiss-Prot
Match: STEL_TOXVR (Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.1e-11 Identity = 36/107 (33.64%), Postives = 64/107 (59.81%), Query Frame = 1
BLAST of Lsi02G000320 vs. Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10 Identity = 54/166 (32.53%), Postives = 71/166 (42.77%), Query Frame = 1
BLAST of Lsi02G000320 vs. TrEMBL
Match: A0A0A0LSJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031800 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 3.4e-90 Identity = 173/210 (82.38%), Postives = 181/210 (86.19%), Query Frame = 1
BLAST of Lsi02G000320 vs. TrEMBL
Match: A0A0L9VHP9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g046800 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 6.4e-44 Identity = 104/214 (48.60%), Postives = 134/214 (62.62%), Query Frame = 1
BLAST of Lsi02G000320 vs. TrEMBL
Match: A0A0S3TCA2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G214800 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 6.4e-44 Identity = 104/214 (48.60%), Postives = 134/214 (62.62%), Query Frame = 1
BLAST of Lsi02G000320 vs. TrEMBL
Match: V7C6M8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G141300g PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.2e-43 Identity = 94/187 (50.27%), Postives = 119/187 (63.64%), Query Frame = 1
BLAST of Lsi02G000320 vs. TrEMBL
Match: I1MQJ7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G215700 PE=4 SV=2) HSP 1 Score: 179.9 bits (455), Expect = 6.0e-42 Identity = 94/187 (50.27%), Postives = 117/187 (62.57%), Query Frame = 1
BLAST of Lsi02G000320 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1) HSP 1 Score: 107.5 bits (267), Expect = 1.9e-23 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 1
BLAST of Lsi02G000320 vs. TAIR10
Match: AT5G07475.1 (AT5G07475.1 Cupredoxin superfamily protein) HSP 1 Score: 94.4 bits (233), Expect = 1.7e-19 Identity = 40/112 (35.71%), Postives = 68/112 (60.71%), Query Frame = 1
BLAST of Lsi02G000320 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein) HSP 1 Score: 92.8 bits (229), Expect = 4.8e-19 Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 1
BLAST of Lsi02G000320 vs. TAIR10
Match: AT3G27200.1 (AT3G27200.1 Cupredoxin superfamily protein) HSP 1 Score: 87.4 bits (215), Expect = 2.0e-17 Identity = 41/132 (31.06%), Postives = 79/132 (59.85%), Query Frame = 1
BLAST of Lsi02G000320 vs. TAIR10
Match: AT4G31840.1 (AT4G31840.1 early nodulin-like protein 15) HSP 1 Score: 81.3 bits (199), Expect = 1.5e-15 Identity = 52/147 (35.37%), Postives = 77/147 (52.38%), Query Frame = 1
BLAST of Lsi02G000320 vs. NCBI nr
Match: gi|659066293|ref|XP_008437239.1| (PREDICTED: chemocyanin-like [Cucumis melo]) HSP 1 Score: 345.1 bits (884), Expect = 1.5e-91 Identity = 175/210 (83.33%), Postives = 183/210 (87.14%), Query Frame = 1
BLAST of Lsi02G000320 vs. NCBI nr
Match: gi|449439595|ref|XP_004137571.1| (PREDICTED: chemocyanin-like [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 4.9e-90 Identity = 173/210 (82.38%), Postives = 181/210 (86.19%), Query Frame = 1
BLAST of Lsi02G000320 vs. NCBI nr
Match: gi|920714488|gb|KOM54576.1| (hypothetical protein LR48_Vigan10g046800 [Vigna angularis]) HSP 1 Score: 186.4 bits (472), Expect = 9.1e-44 Identity = 104/214 (48.60%), Postives = 134/214 (62.62%), Query Frame = 1
BLAST of Lsi02G000320 vs. NCBI nr
Match: gi|950927718|ref|XP_014494977.1| (PREDICTED: uclacyanin-3-like [Vigna radiata var. radiata]) HSP 1 Score: 184.9 bits (468), Expect = 2.7e-43 Identity = 102/216 (47.22%), Postives = 132/216 (61.11%), Query Frame = 1
BLAST of Lsi02G000320 vs. NCBI nr
Match: gi|593704395|ref|XP_007152571.1| (hypothetical protein PHAVU_004G141300g [Phaseolus vulgaris]) HSP 1 Score: 184.1 bits (466), Expect = 4.5e-43 Identity = 94/187 (50.27%), Postives = 119/187 (63.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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