Lsi01G020760 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G020760
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMajor facilitator superfamily protein, putative
Locationchr01 : 29276903 .. 29277775 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATACCAGTACAACCACCGTCACTGCAACCAACGATAACGATGAGTCATTGGTACAAAAACATCTTCACGGGACGACCCCCGCTCGGAGACGACCACACCATCTTGCAAGCAATTTTGAGTGTGGAAATGGCAATTCTATTCATGGCGACAACGTGCGGTGTCGGAGGAGCGTTGACGGTGGTCGATAACGTTGCACAAATCGGTGCTTCGTTAGACTATCCAGCTCGTAGCATTTCGAGTTTTGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAATGGCAGGGTATGTTTCTGAATTTCTTTTGATAAAGTATGGATTAGCTCGACCGTTGATGCTCACTTTTGTAATATTAATGTCTTGCATTGGCCATATTCTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATTACTGGATTCTGCTTGGGAGCGCAACTACCATTAACGGCCACGATCATATCCGATCTTTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCCGTGTCGAGCCCTGTCGGATCGTACATTTTCAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAAGGGGAAAGGCAGATGAGTGATGATATCACAAAAGCATGTAAAGGGGTGGGATGTTATAGGCTTAGTTTTTTAATAATCATAGGGGCTTGTGTTTTTGGGACTTTAGTTTCGGTGGTTTTGGTGCATAGGACAAGAGCGTTTTACAAAGATGATATTTATGCGAGGTTTAGAGAGAGAGAAGAAATTACAACACCAAACACTACTACTACCACTCTTTCTACTTCTACTACTCTTCCCCTTACACAACAAACAGAATCGAGTAAATGTGTGTAA

mRNA sequence

ATGTCGATACCAGTACAACCACCGTCACTGCAACCAACGATAACGATGAGTCATTGGTACAAAAACATCTTCACGGGACGACCCCCGCTCGGAGACGACCACACCATCTTGCAAGCAATTTTGAGTGTGGAAATGGCAATTCTATTCATGGCGACAACGTGCGGTGTCGGAGGAGCGTTGACGGTGGTCGATAACGTTGCACAAATCGGTGCTTCGTTAGACTATCCAGCTCGTAGCATTTCGAGTTTTGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAATGGCAGGGTATGTTTCTGAATTTCTTTTGATAAAGTATGGATTAGCTCGACCGTTGATGCTCACTTTTGTAATATTAATGTCTTGCATTGGCCATATTCTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATTACTGGATTCTGCTTGGGAGCGCAACTACCATTAACGGCCACGATCATATCCGATCTTTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCCGTGTCGAGCCCTGTCGGATCGTACATTTTCAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAAGGGGAAAGGCAGATGAGTGATGATATCACAAAAGCATGTAAAGGGGTGGGATGTTATAGGCTTAGTTTTTTAATAATCATAGGGGCTTGTGTTTTTGGGACTTTAGTTTCGGTGGTTTTGGTGCATAGGACAAGAGCGTTTTACAAAGATGATATTTATGCGAGGTTTAGAGAGAGAGAAGAAATTACAACACCAAACACTACTACTACCACTCTTTCTACTTCTACTACTCTTCCCCTTACACAACAAACAGAATCGAGTAAATGTGTGTAA

Coding sequence (CDS)

ATGTCGATACCAGTACAACCACCGTCACTGCAACCAACGATAACGATGAGTCATTGGTACAAAAACATCTTCACGGGACGACCCCCGCTCGGAGACGACCACACCATCTTGCAAGCAATTTTGAGTGTGGAAATGGCAATTCTATTCATGGCGACAACGTGCGGTGTCGGAGGAGCGTTGACGGTGGTCGATAACGTTGCACAAATCGGTGCTTCGTTAGACTATCCAGCTCGTAGCATTTCGAGTTTTGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAATGGCAGGGTATGTTTCTGAATTTCTTTTGATAAAGTATGGATTAGCTCGACCGTTGATGCTCACTTTTGTAATATTAATGTCTTGCATTGGCCATATTCTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATTACTGGATTCTGCTTGGGAGCGCAACTACCATTAACGGCCACGATCATATCCGATCTTTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCCGTGTCGAGCCCTGTCGGATCGTACATTTTCAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAAGGGGAAAGGCAGATGAGTGATGATATCACAAAAGCATGTAAAGGGGTGGGATGTTATAGGCTTAGTTTTTTAATAATCATAGGGGCTTGTGTTTTTGGGACTTTAGTTTCGGTGGTTTTGGTGCATAGGACAAGAGCGTTTTACAAAGATGATATTTATGCGAGGTTTAGAGAGAGAGAAGAAATTACAACACCAAACACTACTACTACCACTCTTTCTACTTCTACTACTCTTCCCCTTACACAACAAACAGAATCGAGTAAATGTGTGTAA

Protein sequence

MSIPVQPPSLQPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMSDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFREREEITTPNTTTTTLSTSTTLPLTQQTESSKCV
Homology
[Close]
BLAST of Lsi01G020760 vs. TrEMBL
Match: A0A0A0L178_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507390 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.9e-94
Identity = 184/205 (89.76%), Postives = 191/205 (93.17%), Query Frame = 1 

Query: 2   SIPVQPPSLQPTITM--SHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGA 61
           SI VQ PS Q T     S+WYKNIFTGRP LGDDHTILQAILSV+MAILF+ TTCGVGGA
Sbjct: 282 SILVQSPSPQLTTMSRSSNWYKNIFTGRPMLGDDHTILQAILSVDMAILFVVTTCGVGGA 341

Query: 62  LTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTF 121
           LTVVDNVAQIGASLDYP RSISSFVSLMSIWNFLGRVMAGYVSEFLLIKY L RPLMLTF
Sbjct: 342 LTVVDNVAQIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYRLPRPLMLTF 401

Query: 122 VILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 181
           VIL+SCIGHI+IAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV
Sbjct: 402 VILLSCIGHIMIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 461

Query: 182 SSPVGSYIFNVRVAGRVYDREGERQ 205
           SSPVGSYIFNVR+AGR+YDREGERQ
Sbjct: 462 SSPVGSYIFNVRLAGRIYDREGERQ 486

[Close]
BLAST of Lsi01G020760 vs. TrEMBL
Match: A0A061EU62_THECC (Major facilitator superfamily protein, putative OS=Theobroma cacao GN=TCM_022284 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.8e-84
Identity = 159/240 (66.25%), Postives = 192/240 (80.00%), Query Frame = 1 

Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           P  G+D+TILQAI S++M ILF+AT CG GGALTV+DN+ Q+G SL YP  SIS+F+SL+
Sbjct: 274 PDRGEDYTILQAIFSIDMLILFIATACGTGGALTVIDNLGQLGKSLGYPTHSISAFISLV 333

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLYFAS++TG
Sbjct: 334 SIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLYFASVMTG 393

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQM-- 207
           FCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E  +Q   
Sbjct: 394 FCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKEAVKQTEA 453

Query: 208 -------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRE 259
                    D+   C G  CYRL+FLII  A +FG++VS++LV RTR FYK DIY +F+E
Sbjct: 454 LGRTRKPGQDLN--CSGAKCYRLAFLIITAATLFGSIVSLILVFRTRTFYKGDIYKKFKE 511

[Close]
BLAST of Lsi01G020760 vs. TrEMBL
Match: A0A0D2S4A8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G161600 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 4.5e-82
Identity = 165/266 (62.03%), Postives = 200/266 (75.19%), Query Frame = 1 

Query: 2   SIPVQPPSLQPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALT 61
           ++P++P   + TI      K IF   P  G+D+ ILQAI S++M ILF+AT CG GGALT
Sbjct: 296 AVPLRPA--EATIWPLACIKTIFNP-PERGEDYGILQAIFSIDMLILFIATACGTGGALT 355

Query: 62  VVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVI 121
           V+DN+ Q+G SL YP  SIS+F+SL+SIWNFLGRV+AGY+SE  L  Y   RPLMLT VI
Sbjct: 356 VIDNLGQLGKSLGYPKHSISTFISLVSIWNFLGRVLAGYLSEIALTNYNFPRPLMLTLVI 415

Query: 122 LMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSS 181
           L SCIGH+LIAF VPNSLYFAS++TGFCLGAQLPL   IIS+LFGLKHYST+YNVGSVSS
Sbjct: 416 LFSCIGHLLIAFAVPNSLYFASVMTGFCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSS 475

Query: 182 PVGSYIFNVRVAGRVYDREG---------ERQMSDDITKACKGVGCYRLSFLIIIGACVF 241
           PVGSYIFNVRVAG +YD+E          ER+   D+T  C G  CYRL+FLII  A + 
Sbjct: 476 PVGSYIFNVRVAGHLYDKEALKQMEALGLERKPGQDLT--CNGATCYRLAFLIISVATLL 535

Query: 242 GTLVSVVLVHRTRAFYKDDIYARFRE 259
           G++VS++LV RTR FYK DIY +F+E
Sbjct: 536 GSIVSLILVCRTRTFYKGDIYKKFKE 556

[Close]
BLAST of Lsi01G020760 vs. TrEMBL
Match: B9S0E6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1353710 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.6e-79
Identity = 166/293 (56.66%), Postives = 206/293 (70.31%), Query Frame = 1 

Query: 11  QPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIG 70
           QPT T      NIF   P  G+D+TILQA+ SV+M ILF+ATTCGVGG LT +DN+ QIG
Sbjct: 325 QPTETQPSCADNIFKP-PDRGEDYTILQALFSVDMLILFIATTCGVGGTLTAIDNLGQIG 384

Query: 71  ASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHIL 130
            +L YP RS ++FVSL+SIWN+LGRV+AG+ SE LL KY + RPL+ TFV+L SC+GH+L
Sbjct: 385 NALGYPTRSTTTFVSLVSIWNYLGRVVAGFASEILLTKYKIPRPLLFTFVLLFSCVGHLL 444

Query: 131 IAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNV 190
           IAFGVPNSLY AS+I GFC GAQ PL   IIS++FGLK+YSTLYN GSV+SP+GSYI NV
Sbjct: 445 IAFGVPNSLYIASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYILNV 504

Query: 191 RVAGRVYDREGERQMSD---------DITKACKGVGCYRLSFLIIIGACVFGTLVSVVLV 250
           RVAG +YD+E  +QM D         D+T  C GV CY+L+FLII  A VFG L+SV+LV
Sbjct: 505 RVAGHLYDKEALKQMKDLGLTREAGQDLT--CNGVQCYKLAFLIITAATVFGCLISVLLV 564

Query: 251 HRTRAFYKDDIYARFR------EREEITTPNTTTTTLSTSTTLPLTQQTESSK 289
            RTR FY+ DIY +FR      E   ++       TL   T+  +T   E+ K
Sbjct: 565 LRTRKFYQGDIYKKFRGGAKAMENHHVSLNGNGNVTLKEITSEVMTPVPEAGK 614

[Close]
BLAST of Lsi01G020760 vs. TrEMBL
Match: A0A103Y9J3_CYNCS (Major facilitator superfamily OS=Cynara cardunculus var. scolymus GN=Ccrd_016639 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.1e-79
Identity = 159/266 (59.77%), Postives = 198/266 (74.44%), Query Frame = 1 

Query: 4   PVQPPSLQPTITMSHWYKNIFTGRPP-LGDDHTILQAILSVEMAILFMATTCGVGGALTV 63
           P  PP  +   +    ++N+F  RPP  G+D+TILQA+ S++M  LF+AT CGVGG LT 
Sbjct: 309 PWSPPKQEEETSC---FQNVF--RPPERGEDYTILQALFSIDMLTLFLATICGVGGTLTA 368

Query: 64  VDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVIL 123
           +DN+ QIG SL YP +SIS+FVSL+SIWN+LGRV AG+VSE LL KY   RPLMLT  ++
Sbjct: 369 IDNLGQIGESLGYPTQSISTFVSLVSIWNYLGRVTAGFVSEILLKKYKFPRPLMLTLTLV 428

Query: 124 MSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSP 183
           +SCIGHILIA GVPNSLYFAS+I GFC GAQ PL   IIS++FGLK+YSTLYN GSV+SP
Sbjct: 429 LSCIGHILIALGVPNSLYFASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASP 488

Query: 184 VGSYIFNVRVAGRVYDREGERQM---------SDDITKACKGVGCYRLSFLIIIGACVFG 243
           +GSY+ NV+VAG +YD E E+QM          +D+T  C GV C+R++FLII GA VFG
Sbjct: 489 IGSYLLNVKVAGNLYDSEAEKQMKVLGIARKAGEDLT--CVGVECFRVAFLIITGATVFG 548

Query: 244 TLVSVVLVHRTRAFYKDDIYARFRER 260
             VSV+LV RTR FY  DIY +FRE+
Sbjct: 549 AFVSVILVIRTRKFYAGDIYKKFREQ 567

[Close]
BLAST of Lsi01G020760 vs. TAIR10
Match: AT2G39210.1 (AT2G39210.1 Major facilitator superfamily protein)

HSP 1 Score: 280.0 bits (715), Expect = 1.6e-75
Identity = 147/258 (56.98%), Postives = 184/258 (71.32%), Query Frame = 1 

Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           P  GDD+TILQA+ SV+M ILF+AT CGVGG LT +DN+ QIG SL YP RS+S+FVSL+
Sbjct: 328 PERGDDYTILQALFSVDMLILFLATICGVGGTLTAIDNLGQIGNSLGYPKRSVSTFVSLV 387

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWN+ GRV++G VSE  LIKY   RPLMLT V+L+SC GH+LIAF VP  LY AS+I G
Sbjct: 388 SIWNYYGRVVSGVVSEIFLIKYKFPRPLMLTMVLLLSCAGHLLIAFNVPGGLYVASVIIG 447

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMS- 207
           FC GAQ PL   IIS++FGLK+YSTLYN GSV+SP+GSY+ NVRVAG +YD E  +Q   
Sbjct: 448 FCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVAGYLYDVEAGKQYKA 507

Query: 208 ------DDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRERE 267
                 +     C G  C++LSF+II    +FG LVS+VLV RT+ FYK DIY +FRE+ 
Sbjct: 508 LGKTRVEGQDLNCIGTSCFKLSFIIIAAVTLFGVLVSMVLVIRTKKFYKSDIYKKFREKA 567

Query: 268 -----EITTPNTTTTTLS 274
                E+  P    +T++
Sbjct: 568 LAAEMEMAAPAAARSTVA 585

[Close]
BLAST of Lsi01G020760 vs. TAIR10
Match: AT2G28120.1 (AT2G28120.1 Major facilitator superfamily protein)

HSP 1 Score: 275.0 bits (702), Expect = 5.2e-74
Identity = 141/241 (58.51%), Postives = 177/241 (73.44%), Query Frame = 1 

Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           PP G+D+TILQA+LS +M ILF+AT CG+G +LT VDN+ QIG SL YP  ++SSFVSL+
Sbjct: 319 PPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVSSFVSLV 378

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWN+ GRV +G+VSE+LL KY L RPLM+T V+L+SC GH+LIAF VP S+Y ASI+ G
Sbjct: 379 SIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYIASILMG 438

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMS- 207
           F  GAQLPL   IIS+LFGLK+YSTL+N G ++SP+GSYI NVRV G +YD+E  +Q++ 
Sbjct: 439 FSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEALKQLTA 498

Query: 208 ------DDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRERE 262
                 D     C G  CY+L FLI+     FG LVS+ L  RTR FYK DIY +FRE  
Sbjct: 499 RGLTRKDVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREFYKGDIYKKFRESP 558

[Close]
BLAST of Lsi01G020760 vs. TAIR10
Match: AT1G74780.1 (AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-47
Identity = 99/230 (43.04%), Postives = 142/230 (61.74%), Query Frame = 1 

Query: 30  LGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLMSI 89
           L ++  +LQA+  +   +LF+A  CG+G  L+ ++N+ QIG SL Y +  I+S VSL SI
Sbjct: 309 LSENLNLLQAMKKLSFWLLFLAMICGMGSGLSTINNIRQIGESLRYSSVEINSLVSLWSI 368

Query: 90  WNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITGFC 149
           WNFLGR  AGY S+ LL K G  RPL++   +    IGH++IA G   +LY  S+I G C
Sbjct: 369 WNFLGRFGAGYASDALLHKKGWPRPLLMAATLGTMSIGHLIIASGFQGNLYVGSVIVGVC 428

Query: 150 LGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMSDDI 209
            G+Q  L  TI S+LFG++H  T++N  SV+SP+GSYIF+VR+ G +YD+    +     
Sbjct: 429 YGSQWSLMPTITSELFGIRHMGTIFNTISVASPIGSYIFSVRLIGYIYDKTASGE----- 488

Query: 210 TKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRER 260
              C G  C+RLSF+I+     FG LV++VL  RT+  Y+  +  R   R
Sbjct: 489 GNTCYGSHCFRLSFIIMASVAFFGFLVAIVLFFRTKTLYRQILVKRLHHR 533

[Close]
BLAST of Lsi01G020760 vs. TAIR10
Match: AT2G16660.1 (AT2G16660.1 Major facilitator superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-45
Identity = 93/222 (41.89%), Postives = 143/222 (64.41%), Query Frame = 1 

Query: 27  RPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSL 86
           +P LG+DHTI++A+L+V+  +LF++  CGVG  L V++N+ QIG +L Y   ++S FVS+
Sbjct: 312 KPVLGEDHTIMEAVLTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGY--TNVSIFVSM 371

Query: 87  MSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIIT 146
            SIW F GR+++G +SE+ L K G  RPL      ++  +G+IL+A  VPNSLY  S++ 
Sbjct: 372 TSIWGFFGRILSGTLSEYFLKKAGTPRPLWNAASQILMAVGYILMALAVPNSLYIGSMVV 431

Query: 147 GFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMS 206
           G C G +L +T    S+LFGLK+Y  +YN+  ++ P+GS++F+  +AG +YD E      
Sbjct: 432 GVCYGVRLAITVPTASELFGLKYYGLIYNILVLNLPLGSFLFSGLLAGFLYDAEATPTPG 491

Query: 207 DDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFY 249
              T  C G  CYRL F+++  A V G  + +VL +RT+  Y
Sbjct: 492 GGNT--CVGAHCYRLIFIVMALASVIGVGLDLVLAYRTKEIY 529

[Close]
BLAST of Lsi01G020760 vs. TAIR10
Match: AT2G34355.1 (AT2G34355.1 Major facilitator superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-45
Identity = 99/249 (39.76%), Postives = 148/249 (59.44%), Query Frame = 1 

Query: 8   PSLQPTITMSHWYKNIFT-GRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNV 67
           P L  +  +     NIF  G   + +D  IL+A+ +V   +LF+A  CG+G     V+N+
Sbjct: 277 PVLDTSALLDPPSSNIFPDGDHLVAEDSNILEAMSTVNFWLLFLAMLCGMGSGFATVNNM 336

Query: 68  AQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCI 127
            QIG SL Y +  ++S VSL SIWNFLGR  AGYVS+  L K+   RP+ +   + +  I
Sbjct: 337 RQIGESLRYSSVQLNSLVSLWSIWNFLGRFGAGYVSDTFLHKHSWPRPIFMAITLGVMAI 396

Query: 128 GHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSY 187
           GHI++A GV  SLY  S++ G   G+Q  L  TI S++FG++H  T+Y   S++ P+GSY
Sbjct: 397 GHIIVASGVQGSLYAGSVLIGMAYGSQWSLMPTITSEIFGIRHMGTIYFTISIAGPIGSY 456

Query: 188 IFNVRVAGRVYDREGERQMSDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRA 247
           I +V+V G  YD+     ++ +   +C G  C+R SF+I+    +FG+LV+ VL  RT  
Sbjct: 457 ILSVKVIGYFYDK-----VASEDDNSCFGSQCFRTSFMIMASVALFGSLVASVLFFRTHK 516

Query: 248 FYKDDIYAR 256
           FYK+ +  R
Sbjct: 517 FYKNLVAKR 520

[Close]
BLAST of Lsi01G020760 vs. NCBI nr
Match: gi|778697768|ref|XP_004146405.2| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus])

HSP 1 Score: 433.3 bits (1113), Expect = 3.3e-118
Identity = 231/279 (82.80%), Postives = 249/279 (89.25%), Query Frame = 1 

Query: 2   SIPVQPPSLQPTITM--SHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGA 61
           SI VQ PS Q T     S+WYKNIFTGRP LGDDHTILQAILSV+MAILF+ TTCGVGGA
Sbjct: 260 SILVQSPSPQLTTMSRSSNWYKNIFTGRPMLGDDHTILQAILSVDMAILFVVTTCGVGGA 319

Query: 62  LTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTF 121
           LTVVDNVAQIGASLDYP RSISSFVSLMSIWNFLGRVMAGYVSEFLLIKY L RPLMLTF
Sbjct: 320 LTVVDNVAQIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYRLPRPLMLTF 379

Query: 122 VILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 181
           VIL+SCIGHI+IAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV
Sbjct: 380 VILLSCIGHIMIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 439

Query: 182 SSPVGSYIFNVRVAGRVYDREGERQMSDDITKACKGVGCYRLSFLIIIGACVFGTLVSVV 241
           SSPVGSYIFNVR+AGR+YDREGERQ  + +   CKGV CYR+SF+IIIGACVFG+LVSV+
Sbjct: 440 SSPVGSYIFNVRLAGRIYDREGERQ-RNVMRNVCKGVRCYRVSFIIIIGACVFGSLVSVI 499

Query: 242 LVHRTRAFYKDDIYARFREREEITTPNTTTTTLSTSTTL 279
           LV RTR FYKDDIYARFR+ EEI +P   TTT +T+ +L
Sbjct: 500 LVLRTRNFYKDDIYARFRKGEEIKSPLQDTTTTTTTFSL 537

[Close]
BLAST of Lsi01G020760 vs. NCBI nr
Match: gi|700199651|gb|KGN54809.1| (hypothetical protein Csa_4G507390 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 5.6e-94
Identity = 184/205 (89.76%), Postives = 191/205 (93.17%), Query Frame = 1 

Query: 2   SIPVQPPSLQPTITM--SHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGA 61
           SI VQ PS Q T     S+WYKNIFTGRP LGDDHTILQAILSV+MAILF+ TTCGVGGA
Sbjct: 282 SILVQSPSPQLTTMSRSSNWYKNIFTGRPMLGDDHTILQAILSVDMAILFVVTTCGVGGA 341

Query: 62  LTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTF 121
           LTVVDNVAQIGASLDYP RSISSFVSLMSIWNFLGRVMAGYVSEFLLIKY L RPLMLTF
Sbjct: 342 LTVVDNVAQIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYRLPRPLMLTF 401

Query: 122 VILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 181
           VIL+SCIGHI+IAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV
Sbjct: 402 VILLSCIGHIMIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 461

Query: 182 SSPVGSYIFNVRVAGRVYDREGERQ 205
           SSPVGSYIFNVR+AGR+YDREGERQ
Sbjct: 462 SSPVGSYIFNVRLAGRIYDREGERQ 486

[Close]
BLAST of Lsi01G020760 vs. NCBI nr
Match: gi|590631027|ref|XP_007027450.1| (Major facilitator superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 319.3 bits (817), Expect = 6.9e-84
Identity = 159/240 (66.25%), Postives = 192/240 (80.00%), Query Frame = 1 

Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           P  G+D+TILQAI S++M ILF+AT CG GGALTV+DN+ Q+G SL YP  SIS+F+SL+
Sbjct: 274 PDRGEDYTILQAIFSIDMLILFIATACGTGGALTVIDNLGQLGKSLGYPTHSISAFISLV 333

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLYFAS++TG
Sbjct: 334 SIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLYFASVMTG 393

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQM-- 207
           FCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E  +Q   
Sbjct: 394 FCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKEAVKQTEA 453

Query: 208 -------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRE 259
                    D+   C G  CYRL+FLII  A +FG++VS++LV RTR FYK DIY +F+E
Sbjct: 454 LGRTRKPGQDLN--CSGAKCYRLAFLIITAATLFGSIVSLILVFRTRTFYKGDIYKKFKE 511

[Close]
BLAST of Lsi01G020760 vs. NCBI nr
Match: gi|823166647|ref|XP_012483275.1| (PREDICTED: uncharacterized protein LOC105797957 [Gossypium raimondii])

HSP 1 Score: 312.8 bits (800), Expect = 6.4e-82
Identity = 165/266 (62.03%), Postives = 200/266 (75.19%), Query Frame = 1 

Query: 2   SIPVQPPSLQPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALT 61
           ++P++P   + TI      K IF   P  G+D+ ILQAI S++M ILF+AT CG GGALT
Sbjct: 296 AVPLRPA--EATIWPLACIKTIFNP-PERGEDYGILQAIFSIDMLILFIATACGTGGALT 355

Query: 62  VVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVI 121
           V+DN+ Q+G SL YP  SIS+F+SL+SIWNFLGRV+AGY+SE  L  Y   RPLMLT VI
Sbjct: 356 VIDNLGQLGKSLGYPKHSISTFISLVSIWNFLGRVLAGYLSEIALTNYNFPRPLMLTLVI 415

Query: 122 LMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSS 181
           L SCIGH+LIAF VPNSLYFAS++TGFCLGAQLPL   IIS+LFGLKHYST+YNVGSVSS
Sbjct: 416 LFSCIGHLLIAFAVPNSLYFASVMTGFCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSS 475

Query: 182 PVGSYIFNVRVAGRVYDREG---------ERQMSDDITKACKGVGCYRLSFLIIIGACVF 241
           PVGSYIFNVRVAG +YD+E          ER+   D+T  C G  CYRL+FLII  A + 
Sbjct: 476 PVGSYIFNVRVAGHLYDKEALKQMEALGLERKPGQDLT--CNGATCYRLAFLIISVATLL 535

Query: 242 GTLVSVVLVHRTRAFYKDDIYARFRE 259
           G++VS++LV RTR FYK DIY +F+E
Sbjct: 536 GSIVSLILVCRTRTFYKGDIYKKFKE 556

[Close]
BLAST of Lsi01G020760 vs. NCBI nr
Match: gi|255556864|ref|XP_002519465.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Ricinus communis])

HSP 1 Score: 302.8 bits (774), Expect = 6.7e-79
Identity = 166/293 (56.66%), Postives = 206/293 (70.31%), Query Frame = 1 

Query: 11  QPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIG 70
           QPT T      NIF   P  G+D+TILQA+ SV+M ILF+ATTCGVGG LT +DN+ QIG
Sbjct: 325 QPTETQPSCADNIFKP-PDRGEDYTILQALFSVDMLILFIATTCGVGGTLTAIDNLGQIG 384

Query: 71  ASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHIL 130
            +L YP RS ++FVSL+SIWN+LGRV+AG+ SE LL KY + RPL+ TFV+L SC+GH+L
Sbjct: 385 NALGYPTRSTTTFVSLVSIWNYLGRVVAGFASEILLTKYKIPRPLLFTFVLLFSCVGHLL 444

Query: 131 IAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNV 190
           IAFGVPNSLY AS+I GFC GAQ PL   IIS++FGLK+YSTLYN GSV+SP+GSYI NV
Sbjct: 445 IAFGVPNSLYIASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYILNV 504

Query: 191 RVAGRVYDREGERQMSD---------DITKACKGVGCYRLSFLIIIGACVFGTLVSVVLV 250
           RVAG +YD+E  +QM D         D+T  C GV CY+L+FLII  A VFG L+SV+LV
Sbjct: 505 RVAGHLYDKEALKQMKDLGLTREAGQDLT--CNGVQCYKLAFLIITAATVFGCLISVLLV 564

Query: 251 HRTRAFYKDDIYARFR------EREEITTPNTTTTTLSTSTTLPLTQQTESSK 289
            RTR FY+ DIY +FR      E   ++       TL   T+  +T   E+ K
Sbjct: 565 LRTRKFYQGDIYKKFRGGAKAMENHHVSLNGNGNVTLKEITSEVMTPVPEAGK 614

The following BLAST results are available for this feature:
BLAST of Lsi01G020760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi01G020760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L178_CUCSA3.9e-9489.76Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507390 PE=4 SV=1[more]
A0A061EU62_THECC4.8e-8466.25Major facilitator superfamily protein, putative OS=Theobroma cacao GN=TCM_022284... [more]
A0A0D2S4A8_GOSRA4.5e-8262.03Uncharacterized protein OS=Gossypium raimondii GN=B456_006G161600 PE=4 SV=1[more]
B9S0E6_RICCO4.6e-7956.66Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1353710 PE=4 SV=1[more]
A0A103Y9J3_CYNCS6.1e-7959.77Major facilitator superfamily OS=Cynara cardunculus var. scolymus GN=Ccrd_016639... [more]
BLAST of Lsi01G020760 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G39210.11.6e-7556.98 Major facilitator superfamily protein[more]
AT2G28120.15.2e-7458.51 Major facilitator superfamily protein[more]
AT1G74780.11.1e-4743.04 Nodulin-like / Major Facilitator Superfamily protein[more]
AT2G16660.13.9e-4541.89 Major facilitator superfamily protein[more]
AT2G34355.13.9e-4539.76 Major facilitator superfamily protein[more]
BLAST of Lsi01G020760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697768|ref|XP_004146405.2|3.3e-11882.80PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus][more]
gi|700199651|gb|KGN54809.1|5.6e-9489.76hypothetical protein Csa_4G507390 [Cucumis sativus][more]
gi|590631027|ref|XP_007027450.1|6.9e-8466.25Major facilitator superfamily protein, putative [Theobroma cacao][more]
gi|823166647|ref|XP_012483275.1|6.4e-8262.03PREDICTED: uncharacterized protein LOC105797957 [Gossypium raimondii][more]
gi|255556864|ref|XP_002519465.1|6.7e-7956.66PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G020760.1Lsi01G020760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 68..245
score: 6.5
IPR020846Major facilitator superfamily domainunknownSSF103473MFS general substrate transportercoord: 35..249
score: 2.88
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 45..246
score: 2.9
NoneNo IPR availablePANTHERPTHR21576UNCHARACTERIZED NODULIN-LIKE PROTEINcoord: 19..261
score: 1.1E
NoneNo IPR availablePANTHERPTHR21576:SF40SUBFAMILY NOT NAMEDcoord: 19..261
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G020760MELO3C008907.2Melon (DHL92) v3.6.1lsimedB167
Lsi01G020760Cla97C04G069910Watermelon (97103) v2lsiwmbB137
Lsi01G020760CsGy4G018880Cucumber (Gy14) v2cgyblsiB238
Lsi01G020760CsaV3_4G030460Cucumber (Chinese Long) v3cuclsiB274
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G020760Wax gourdlsiwgoB174
Lsi01G020760Cucumber (Gy14) v1cgylsiB428
Lsi01G020760Cucurbita maxima (Rimu)cmalsiB599
Lsi01G020760Cucurbita moschata (Rifu)cmolsiB585
Lsi01G020760Cucurbita pepo (Zucchini)cpelsiB050
Lsi01G020760Wild cucumber (PI 183967)cpilsiB249
Lsi01G020760Cucumber (Chinese Long) v2culsiB261
Lsi01G020760Melon (DHL92) v3.5.1lsimeB159
Lsi01G020760Watermelon (Charleston Gray)lsiwcgB139
Lsi01G020760Watermelon (97103) v1lsiwmB151