Lsi01G020230 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G020230
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMembrane GTP-binding protein LepA
Locationchr01 : 27653639 .. 27661876 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCGGTAGAGACTGTCGTGATTGACATCAAGAATGAAGTTGGAAAATTACGTTTGATGCTGGCGCAAATTCTACAAAAACTGGATGTACAAAATCAAACAATTGATCAAGAAATACAAAATAAGACAATCGGAAGGGTAAAGAAAATTCAAGATGCAACGAAACCATTCAAGAAAAGGGATCATTTGAAGCAATGAAGAAGAATAAGGAGCTGTTGGAAGCAAGAACTCAAGAAAGACATCAAGAACCATTCAAGATCCGAAGCCATACAAATATTCAACATCCCTCGGAAATTCGCAGCCTACCTACAAGGTTCAATGAAAATTCAAGATTTCGACCACAAGAAATGCAGCTACCTGGTTACATGATACAAGATTCGGATTCATCTGATGAAAGTGAGAATTTTCAACTTGGGAATCAAGAAAAAATGGGATTTCGGTTTGGAAGACAGCAACACTTTCAAGAACATCAAGATTATCGAATGAAGATTGATCTTCCAAATTTTAATGGCCGTATGGATGTTGAAGCTTTCTTGGATTGGATTACTAAGGTAGAGAACTTCTTCGAATACGCCAATACTCCTGAAGATAAAAAAGTTAAGTTAGTAGCCTTTAAATTCCAAAGAGGGGCATCGGCTTGGTGGGATCAATTAGAAACAAATCGAAGGTATTATGGATATAAATAGGAGTTTTATTTTATGCAATAGGCGTTGATACCATGAAGATTTCTAATATATTTTTATTATTTATTTATTTTTTGAACGGAAACAGAATTTTTTTTATTATTTAGACTAAGGATTATAAGATGTTAAATAGAAAAATAAAAAATATATAAAAAAAGAAAGGCTAAAACAGTTCAAACTAATCTAATTAACCCCTAAATTCTAAGATGTTAAAAGAGAAAACCTAAACCTTAGGGATCGAAAAATGTACGGGGAATGATATAATAAATCTGACTTTCGCAAAAAGCTATTTACAAACATGTCCCAACTTTGATGCTCATTTCAGCATTATTCTTCTATTTTCTTGCCTTGTTTATTTTCAGGTTGGCTATCTTTCAGCTTCTATAAGATCAGTAGCTGATGCAAGAGTTGGCGACACCATTACTCACTATGGCAGAAAGGCCGAAGACTCCCTACCTGGATATGAGGAGGTCACTCCAATGGTATTCTGTGGCCTTTTTCCGGTTGATGCAGACCAGTATTGATCCCCTGCTTATTCTCATTTATTTACTATGTTCTAAAATTTACAAAGTAATAGTCTGCTTGTTTTCTTCTTAACCTAAATTTTTGTATTCTACTTTTTCAGGTTCCCAGAGTTACGTGATGCCCTTGAAAAGCTACAACTTAATGACGCTGCGTTGAAGGTTATTGAACCATTGATTTTATTTTGTGTGTTTCAGTTTTAAGTCCATTCTATACATCGATTAAATTGTTCAATAATTTGATTTTATTGAGTTGAGGACGAAGATTTTATCCTATCACAACCTGCTTAACATGATTACATCATAGAGAAGATGTAGAAATTGGAAACATTTACACGTGAGGATTGGCTAGTTAACATTCTTATGTCAGAGGAACTTTCTGGCATATAGTTTGACAATCGGTTTTTTATAGTATTCTTTTTGTAGAATCATAATCATTTACGAATAGATACAAATCATTTGAGGTGTAGTGTTGATGGAAAAACAATTTCTTTATCTTCTTTATTTTCTTCCCAATTTCAACCGTTACAAAAAGAAAAAAAAAAATGTTGAGATGTGTTGTTTTATAAGCCAAATAGATTCATTTTTTTTAAAAATGCATACTCAATTTTGGACATGATAGTGTTAAAGTTTCCAATTTAATTTTTTTAATAGTAACAACTTATTAAGTAAAAATGAAAGTTTACAAGTTCATGCAAAAATCCAAAGCCCACAAAAAAAATGTACCCAATAAAAAGAAGGGGCTCCAACTATATAAAATTGAAGTTATAGAATAATTAGAAAAGTTATTTGAAATCAAAACATAGAGGGAAACATGAAATCTAACAAGGGACCAAACATCACTAGGGTGCCTTTCCAACCCTTTAAGTGCTCTATTGTTCCTATCTTCCCAAAGATCCCATAAAATAGCACACACCCCAAAAAGTCAAAAAAGCTGGCCCTTCTCATGAAAGGGCAGATGGAGGAAGAACTCCCTAATCATATCATAAGTTTCCATGTGGTGAGTCAGGGAGAAACCAAATGTCAGAAAGAAGTCACTTCAAACTAGGGATGATACAATAACCAAAAACCGAGAGAACCAAACCAAACCAAATCGATCCAGTGGATTGGTTTGGTTTTTTAGCAAAATATTGGACATGTTGGTTTGAATTTGGAGAAAACCAAGAATTTTTGGATTAGTTCGGTTTTTGTTTGACAAATCCAACCAAACACCAAAACAAACCGAGATATATAAATATGCCTACATAAACTCAAAATCCCTCATATTTCTATTCTTTCAGCCTCGATTCTTCATCTCTCTTGATCTCACATAAACATAACATGTATATGCCAGAGGTATTTGACTTGAGAGAGAGACTACATGGAAATAAAATTAAAAACCAATTACAAAAGGTAAGAATTCTATGATGATGACATGAAGGAGGTTAATATATAAAGTCAAATCTCCATGCCTAATCTGTCAAGAGAGGTATGAAAGGAAAAGGCAAACAAATCATTTAATTTGTTTGAATATTTATGATTTGTTGCAAATTTATGTGGAAATTATGCCGAGACCTATTTGACTAATATGGTAGCTTAAATAATTCCTTGGCTATTGCTATGGAAACTTTGAATGATTTGGAGAAGTAATTTTGGGCCAAAAATAGGAAAATGGACAAAACTATTTTTTTTTCAAAAGAAAAAAAACCAAGAACCAAACTGCATATGACCGAACCGAGGAAAAATTGAACCAATGGTTTTACCCTTTATTGGATATTGGTTCGGTTCTTATTTTAGCTAAATTGATCGGTTCGGTTTGGTTCTCGGTTTAGCTTAAAACCAAAGGAAACCGAAGCAATATCACCCCTACTCCAAACAGCTCTCGAGAACTCAATCTTCAAAGAATGTGGTCCAAGGCCTCCTCTGCCTTTCGACGGAGAATACAACAAAACAAATCAATCAATGAGAGCATCTTCCTCATAAACCGATCCAAAGTGTTAACTCTTCCATTTAAAACTTGCCAGGTAATTAAATTAACTTTCCTCGAAATCTTAAACCATCATGGATTGGCCTAGTGGAAAAAAATGCGACATAGTCTCAACAAATGGCTAAGAGGTCATGGGTTCAATCAATGGTGGCCACCTACCTAGGAATTAATTAGGGGTGTTCAAAAAATCCGATGACCCAAAAAAACCAATCAACCCAACCCAACCCGTACTACGATTTGGGTTGATAACCGGTTAGGTTCAAATAAATGAAAGTTTTATGGGTTAGGTTGGTTCATGGGTTCACCTAAAATAACCCGAACTTATTATTAACTTTAAAATGTATATTTTAATTTTATTTAATTTCATTATTTTTTTAGATAATTTATTCTCCAACAACTCCTAAAAATAGTTTTTTAGCACTTTGGAAAGAAAAAACTCATTATAAAACTGAAATTGAGTTGTTAATCTTAATTTAATATATGAAAATAATTAAATCAATTTTTTACGTATTAACATTTTACTTCTTTTTAGAAAAAAAAGTAAATAAATTACTCGAGTAACCTGAACCAACCCGACCCAAATGTTTCATGGTTGGGTTAGGTTGGTTCATTTTTTAATAAGGGTTATTTGGGTTGAAGGAACATACAACCCCAACAATTGGGTTGTGTCTAAAAAGTCCTTACCCAACCCACGAACACCCCTAGAATTAATATCCTACGAGTTTCCTTGACACCAAATGTTGTAGGTCAGGCGGGTTGTCATTGAAAAAAAAATCCTCAAAATCTTAAAGGAAGAAAAGCTCGAATATTTATTCCGAAAGGTCTCAAGAGAAAGGGGTGGAGGTCAATCGCATATGAGCTTTCTAGTTTTTTGCCTTTACCTTCCTCACCTTCCTCGAAGGTTGCATCCAGAAAGTGGGATGTGCCGAAGGTCCACTAAATTTCGCCAAGGTGGTGAGGAAAGGAAAATGTGGTGTCGACAGCTAAGAATTTGGAGTCTAAAGAGGAGAAAGTTAATTTAGATTGGGAGTGTGACTTTGCCTTTGATGTTTCATTAGCGTTGTTGGTGGAAAGGTTGAGGGTTAAGCTGAGTTGGAACCAGATCGAGAAGGCTCTGGTCGAGAAAGTGGGTTGAAGGTTTTCTTTTAGACCCTTTTGTTCCTATTTAGCGGTGTGCGTTTGTGAAAGTTGTAAGTGATATGATATTAAATTTGTCTTAACCCATTAGCTTAAGCTTTTGGGTCAATTGGTGATTTAAGAAAAGTAAGGAGGTAGCTAGCGAGATTTGTGGCAATGATTTGGGTATTTTTTCAGAGGATTTAGTGGCTTTAGCTTGGAACTTTAGTTTGGTGGCTGAAGGGAGACGTTTCGCTTTTTCGGGGGGTTGGGTTACAATGCTGGATATTCTTCCATTCTTAAGAACCAAGAATTTCATGTCTGAGCTTGCTAAATGGTGTGAAAACCAAAGTTCCGTTGGTCAAATGCTCTACAACACAAAATCTCGACCGAATCGACCGATGATATAAAGTTTATCCACCAAATATCAAAGTAGCTCGATTCGCATGCAATTTTAAATTTAAAAAAAAAAAAAAACTCCTATTCATGTGATGAAGGCCTTGATTGGCGTGAATAAACACGAAAAATAGTAAATATTCTTTTTCCCTTTCTTTTTCATTATCACATCTTGGTTCCATCATTAATTGTCTTTTCCATTCGTCTTTTCCTTCATTAATTTGTAATAATTATTTTTCCTTTCTTCTCTCTCCATAATATCATTTCCCTCATCTTTTTCCCTTTTGTCTCTATCATCGTTTACCCAACCCATTTTTTTCCATTCTCTCTCTCATTTCTTTGAATTTCATCTTCTTCCTCTTTCTCGTTTATTTTCTTAGTCTCTCTCCATTTTATTTATTACTCTCTCCTCCATACCTTCTTCTTTTCTTCTCTTTTCTCCATTTTCCCTTCTTCTTCCCCATTCCTTTTCCATTTATTGTTCTCTCTTCTCCATCCCTTCTTCTCTTCCTTTAGCTTCCCCACCCACTCTGAAACCAATGGCAACCGACCGCCGGAAATCGACATACCAGTGATCGGCAGCAATTTTCGGCCAAAACCGCCGTCGACCGACTGGTGATCACCCCTAGGGGAGGGGAGGGACACGTACTTTTGAGAAGACCTTTGGGTGGGGGAGAGACCTCTTTGTGCTTTGTTCCCTCATCTATATCACTTGTTGTCGCTAAAAAATGATTTTGTTGTTGATTGTCTTGTTTGGTTTGAGTGCTCTTGTTCCTTTACTTTCGGGTTCCACCGCTCTCTTTCCAATAGGGAGGGTCACCTCTTTAGAAGAGGGAGAAGGGATGTTAGAGTTTGGAGCCCTAATCCTTTGGAAGGATTTTCATGTAAGTCTTTTTTTCATTATTTGGTTGATCCTTCTCTCGTTGGTGTGTCGGTCTTTACGGTGCTTTGGAGGATTAAAATTCCAAGGAAGGTGATGTTTTTTATCTGGCAAGTTCTTCATGGTCGTGCTAACACGTTTGATCGGCTTGTGAGGAAGTTGTCTTTGCTTGTTGGGCTGTTTTGTTGTATTCTTTGTCAGAAGGCAAAGGAAGATTTGGACCATATTCTCTGAAGTTATGATTATGCGAGTAGTGTTTGGGAATCCTTCCTTCAGACGTTTGGCTTGATGTATGTTCGTCATAAAAACATTAGTGAGTTCCTCCTCAATCCGCCTTTTTGGGAGGGGCCGTTTTTTATGGATTGTGAGGGTGTGTGCAATTTTATGGGATCTGTGGGGTGAGCGGAATAATGGGGTTTTTAGGGGTATTGAAAGGGATCCTTTGGAGATTTGGTCCCTCGTTCATTTCCATGTCTCTTTATGGGCTTCAATTTCGAAGACCTTTTGTAATTATTCTATAGCCACTATTTTGCATAATTGGAGTCCCTTTTAGTAGGAGTTCCCTTTTCTGTGCGCTTGTTTTTTTGTATGCTTGTGTATTCTTTCATTTTTTTCTCAATGAAAGTTGTTTTTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTACGAAATAAAGGTTTACACTCCACACCCTAACATCCTTTCTCTCGTGTCTAAAGATAACTCCCATAAACAAGGCCAAAAGAGAGGCCACATGCCTCGCTTCCCTATCTGGTAAAGAGTGACGAAAACAAAAAACAAAAAAAAGTTAACCAAACAAAAATAGGCAGTAGAAACATATTTTTTTAGGTAATAAAAAAATACACCAGATACCCCTTACTTAGTAACTCAACTCTGAACCCCTAACACAAACTTCCTTAACCAACTCAACACTGCACCCTAAACACCGACATATTAAACCAACTCAACTCTGCCTGCCAAACACACCTTAATTGTTGTAAGATCAAACGGTTGTTCATGGCATGCGATGAGTTGAGGTTTGTAGATGATTTACACATACATGAATACAGAAAAAGAAAAAGAAAAAAAAAGTTCGTTTGGTTCTCAAGGAAGAATTAGACCATTGGTGTAAGCCTAATGTATTAAAGGAGATAATCCTCCAAGAATCAAGCTTTTAAATCTTTTATTAGAATGAAAGGTGTAATGAGTACATGAGAGAGATTTTCTATTTATAGAGAATTAAAAGCAAACTAAAACCCGCAAGGAAACTAAAAAGGAATTAAAAATCCAAATAGGAAACTAAAAGGAATGAACTATGGAATTACCCAGGATTAACCATTATTTTCACTAATTCTCCCTACATCACTGCATTATATTGTAAGAAATTATGTTGTGATCTTTGAGGTTGCATGTTTGCATCCATATCATGGCATTCATTTTGCTACAATTTTCCACTACCCATCTTCATGCTATTTTAATCATTTATGTCCAGACCATTTTATATTGTTGCAATCATCAGATTGCAACAATAAACTATATGAATTTTAATCATTTTGGCACTTCAACTCCATACAGTTTGAGCCTGAAACATCAAGTGCAATGGGTTTTGGCTTCAGATGTGGTTTCCTGGGTCTTCTCCACATGGAAATCGTCCAGGTTCTTTTCCTTCTATCTTTTCATAATGAAAATTGTCTGCCTTCCAGCATTTGAAACAAACGTTAAAAGAAAATTTTTCTTACAAATGCCTCTGTTATACAGGAAAGACTTGAAAGGGAATACAACCTGAGCCTGATAACAACCGCACCAAGCGTTGTATACAGAGTTAACTGTGTAAACGGTGATACTGTAATTTCTCCTCTATCCTAAGACTTATACTTCATTATCTTATGGTAGTTGGAAGAATGTAAATAGTATGTACTTACTACTTGCTGTAATTGTGAATCTAGAGCAACGTGATTTAGATAGTTCTCTGCACGTGCTAAAAAAACTTGATGACGCACAAAATTTGATTTGCAAAACCCAAAAGCTTGGATTGAGTTTGCGTGATAAGCTTGTTTCTATAGTTGTTTTTGGTAACTTTTGAACATTAGTCTTTTCATTTCATCAATAAAAAGTTTCATTGCTTGTTAAAAAAAAAATAAGTCGGACCAAAATAGGTTGGTTTAGTTCACGAATTCTAAAGCTAGTTAAGGTGAATCAATCCAAATCTGTTAATT

mRNA sequence

ATGACTTCGGTAGAGACTGTCGTGATTGACATCAAGAATGAAGTTGGAAAATTACGTTTGATGCTGGCGCAAATTCTACAAAAACTGGATGTACAAAATCAAACAATTGATCAAGAAATACAAAATAAGACAATCGGAAGGGTTGGCTATCTTTCAGCTTCTATAAGATCAGTAGCTGATGCAAGAGTTGGCGACACCATTACTCACTATGGCAGAAAGGCCGAAGACTCCCTACCTGGATATGAGGAGGTCACTCCAATGGTATTCTGTGGCCTTTTTCCGGTTGATGCAGACCAGTTCCCAGAGTTACGTGATGCCCTTGAAAAGCTACAACTTAATGACGCTGCGTTGAAGTTTGAGCCTGAAACATCAAGTGCAATGGGTTTTGGCTTCAGATGTGGTTTCCTGGGTCTTCTCCACATGGAAATCGTCCAGGAAAGACTTGAAAGGGAATACAACCTGAGCCTGATAACAACCGCACCAAGCGTTGTATACAGAGTTAACTGTGTAAACGGTGATACTGTAATTTCTCCTCTATCCTAAGACTTATACTTCATTATCTTATGGTAGTTGGAAGAATGTAAATAGTATGTACTTACTACTTGCTGTAATTGTGAATCTAGAGCAACGTGATTTAGATAGTTCTCTGCACGTGCTAAAAAAACTTGATGACGCACAAAATTTGATTTGCAAAACCCAAAAGCTTGGATTGAGTTTGCGTGATAAGCTTGTTTCTATAGTTGTTTTTGGTAACTTTTGAACATTAGTCTTTTCATTTCATCAATAAAAAGTTTCATTGCTTGTTAAAAAAAAAATAAGTCGGACCAAAATAGGTTGGTTTAGTTCACGAATTCTAAAGCTAGTTAAGGTGAATCAATCCAAATCTGTTAATT

Coding sequence (CDS)

ATGACTTCGGTAGAGACTGTCGTGATTGACATCAAGAATGAAGTTGGAAAATTACGTTTGATGCTGGCGCAAATTCTACAAAAACTGGATGTACAAAATCAAACAATTGATCAAGAAATACAAAATAAGACAATCGGAAGGGTTGGCTATCTTTCAGCTTCTATAAGATCAGTAGCTGATGCAAGAGTTGGCGACACCATTACTCACTATGGCAGAAAGGCCGAAGACTCCCTACCTGGATATGAGGAGGTCACTCCAATGGTATTCTGTGGCCTTTTTCCGGTTGATGCAGACCAGTTCCCAGAGTTACGTGATGCCCTTGAAAAGCTACAACTTAATGACGCTGCGTTGAAGTTTGAGCCTGAAACATCAAGTGCAATGGGTTTTGGCTTCAGATGTGGTTTCCTGGGTCTTCTCCACATGGAAATCGTCCAGGAAAGACTTGAAAGGGAATACAACCTGAGCCTGATAACAACCGCACCAAGCGTTGTATACAGAGTTAACTGTGTAAACGGTGATACTGTAATTTCTCCTCTATCCTAA

Protein sequence

MTSVETVVIDIKNEVGKLRLMLAQILQKLDVQNQTIDQEIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVISPLS
Homology
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BLAST of Lsi01G020230 vs. Swiss-Prot
Match: GUFP_VITVI (Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera GN=VITISV_013255 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.2e-67
Identity = 121/130 (93.08%), Postives = 128/130 (98.46%), Query Frame = 1 

Query: 46  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRD 105
           G VGYL+ASIRSVADARVGDTITHYGRKAE+SLPGYEE TPMVFCGLFPVDAD+FP+LRD
Sbjct: 333 GEVGYLAASIRSVADARVGDTITHYGRKAENSLPGYEEATPMVFCGLFPVDADKFPDLRD 392

Query: 106 ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVY 165
           ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEI+QERLEREYNL+LITTAPSVVY
Sbjct: 393 ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIIQERLEREYNLTLITTAPSVVY 452

Query: 166 RVNCVNGDTV 176
           RVNC+NGDTV
Sbjct: 453 RVNCINGDTV 462

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BLAST of Lsi01G020230 vs. Swiss-Prot
Match: GUFP_RICCO (Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis GN=RCOM_1767360 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.8e-66
Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           +++    G VGYLSASIRSVADARVGDTITHY R+A+ SLPGY+E TPMVFCGLFPVDAD
Sbjct: 329 QVEELYAGEVGYLSASIRSVADARVGDTITHYNRRAQSSLPGYKEATPMVFCGLFPVDAD 388

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPE+RDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 389 QFPEVRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 448

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNCV+GDTV
Sbjct: 449 TAPSVVYRVNCVDGDTV 465

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BLAST of Lsi01G020230 vs. Swiss-Prot
Match: GUFP_ARATH (Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana GN=At5g08650 PE=2 SV=2)

HSP 1 Score: 248.4 bits (633), Expect = 5.8e-65
Identity = 119/131 (90.84%), Postives = 125/131 (95.42%), Query Frame = 1 

Query: 46  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRD 105
           G VGY++AS+RSVADARVGDTITHY RKAE SLPGYEE TPMVFCGLFPVDADQFP+LRD
Sbjct: 334 GEVGYIAASVRSVADARVGDTITHYSRKAESSLPGYEEATPMVFCGLFPVDADQFPDLRD 393

Query: 106 ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVY 165
           ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNL+LITTAPSVVY
Sbjct: 394 ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLNLITTAPSVVY 453

Query: 166 RVNCVNGDTVI 177
           RVN VNGDT +
Sbjct: 454 RVNSVNGDTTL 464

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BLAST of Lsi01G020230 vs. Swiss-Prot
Match: GUFP_POPTR (Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_815670 PE=3 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 4.9e-64
Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           +++    G VGYLSASIRSVADARVGDTITHY RKAE SLPGYEE TPMVFCGLFPVDAD
Sbjct: 324 QVEELYAGEVGYLSASIRSVADARVGDTITHYSRKAEQSLPGYEEATPMVFCGLFPVDAD 383

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QF ELRDALEKLQLNDAALKFEPETS+AMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 384 QFSELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 443

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRV+CV+ D V
Sbjct: 444 TAPSVVYRVHCVDDDIV 460

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BLAST of Lsi01G020230 vs. Swiss-Prot
Match: GUFP_PHYPA (Translation factor GUF1 homolog, chloroplastic OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158777 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-56
Identity = 108/137 (78.83%), Postives = 117/137 (85.40%), Query Frame = 1 

Query: 36  IDQEIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPV 95
           I   +     G VGYLSASI+SVADARVGDTIT   RKA  +LPGY+  TPMVFCGLFP+
Sbjct: 378 IQMPVNELYAGEVGYLSASIKSVADARVGDTITTVSRKAAQALPGYQLATPMVFCGLFPI 437

Query: 96  DADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLS 155
           DADQF ELR+ALEKLQLNDAAL+FEPETSSAMGFGFRCGFLGLLHMEIVQERLEREY L 
Sbjct: 438 DADQFVELREALEKLQLNDAALQFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYGLD 497

Query: 156 LITTAPSVVYRVNCVNG 173
           LITTAPSVVYRV+C +G
Sbjct: 498 LITTAPSVVYRVHCTDG 514

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BLAST of Lsi01G020230 vs. TrEMBL
Match: A0A0A0KYH8_CUCSA (Translation factor GUF1 homolog, mitochondrial OS=Cucumis sativus GN=Csa_4G437010 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.3e-67
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDAD
Sbjct: 21  EVEELYAGEVGYLSASIRSVADARVGDTITHHGRKAEDSLPGYEEATPMVFCGLFPVDAD 80

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 81  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 140

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNCVNGDTV
Sbjct: 141 TAPSVVYRVNCVNGDTV 157

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BLAST of Lsi01G020230 vs. TrEMBL
Match: A0A061DN87_THECC (Translation factor GUF1 homolog, chloroplastic OS=Theobroma cacao GN=TCM_003433 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.3e-67
Identity = 127/139 (91.37%), Postives = 132/139 (94.96%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           +++    G VGYLSASIRSVADARVGDTITHYGR+AE SLPGYEE TPMVFCGLFPVDAD
Sbjct: 327 QVEELYAGEVGYLSASIRSVADARVGDTITHYGRRAESSLPGYEEATPMVFCGLFPVDAD 386

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 387 QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 446

Query: 159 TAPSVVYRVNCVNGDTVIS 178
           TAPSVVYRVNC+NGDTVIS
Sbjct: 447 TAPSVVYRVNCINGDTVIS 465

[Close]
BLAST of Lsi01G020230 vs. TrEMBL
Match: A0A061DQ14_THECC (Translation factor GUF1 homolog, mitochondrial OS=Theobroma cacao GN=TCM_003433 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.6e-66
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           +++    G VGYLSASIRSVADARVGDTITHYGR+AE SLPGYEE TPMVFCGLFPVDAD
Sbjct: 327 QVEELYAGEVGYLSASIRSVADARVGDTITHYGRRAESSLPGYEEATPMVFCGLFPVDAD 386

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 387 QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 446

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNC+NGDTV
Sbjct: 447 TAPSVVYRVNCINGDTV 463

[Close]
BLAST of Lsi01G020230 vs. TrEMBL
Match: A0A0B2RFV8_GLYSO (Translation factor GUF1 homolog, mitochondrial OS=Glycine soja GN=glysoja_012859 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.8e-66
Identity = 124/141 (87.94%), Postives = 134/141 (95.04%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           +++    G VGYLSASIR+VADARVGDT+THYGRKA++SLPGYEE TPMVFCGLFPVDAD
Sbjct: 269 QVEELYAGEVGYLSASIRTVADARVGDTVTHYGRKADNSLPGYEEATPMVFCGLFPVDAD 328

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFP+LRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 329 QFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 388

Query: 159 TAPSVVYRVNCVNGDTVISPL 180
           TAPSVVYRV+CVNGDTVIS +
Sbjct: 389 TAPSVVYRVHCVNGDTVISSI 409

[Close]
BLAST of Lsi01G020230 vs. TrEMBL
Match: A0A058ZVZ0_EUCGR (Translation factor GUF1 homolog, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_L00739 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.1e-66
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           +++    G VGYLSASIRSVADARVGDTITHYGR+AEDSLPGYEE TPMVFCGLFPV+AD
Sbjct: 342 QVEELFAGEVGYLSASIRSVADARVGDTITHYGRRAEDSLPGYEEATPMVFCGLFPVEAD 401

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 402 QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 461

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNCVNGD V
Sbjct: 462 TAPSVVYRVNCVNGDIV 478

[Close]
BLAST of Lsi01G020230 vs. TAIR10
Match: AT5G08650.1 (AT5G08650.1 Small GTP-binding protein)

HSP 1 Score: 248.4 bits (633), Expect = 3.3e-66
Identity = 119/131 (90.84%), Postives = 125/131 (95.42%), Query Frame = 1 

Query: 46  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRD 105
           G VGY++AS+RSVADARVGDTITHY RKAE SLPGYEE TPMVFCGLFPVDADQFP+LRD
Sbjct: 334 GEVGYIAASVRSVADARVGDTITHYSRKAESSLPGYEEATPMVFCGLFPVDADQFPDLRD 393

Query: 106 ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVY 165
           ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNL+LITTAPSVVY
Sbjct: 394 ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLNLITTAPSVVY 453

Query: 166 RVNCVNGDTVI 177
           RVN VNGDT +
Sbjct: 454 RVNSVNGDTTL 464

[Close]
BLAST of Lsi01G020230 vs. TAIR10
Match: AT5G39900.1 (AT5G39900.1 Small GTP-binding protein)

HSP 1 Score: 124.4 bits (311), Expect = 7.1e-29
Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = 1 

Query: 46  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRD 105
           G+VGY+   +R+  +AR+GDTI +  +   + LPG++ V  MVF G++P D   F  L  
Sbjct: 319 GQVGYIVTGMRTTKEARIGDTI-YRTKTTVEPLPGFKPVRHMVFSGVYPADGSDFEALGH 378

Query: 106 ALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVY 165
           A+EKL  NDA++    ETS+A+G GFRCGFLGLLHM++  +RLE+EY   +I+T P+V Y
Sbjct: 379 AMEKLTCNDASVSVAKETSTALGMGFRCGFLGLLHMDVFHQRLEQEYGTQVISTIPTVPY 438

Query: 166 RVNCVNG 173
                +G
Sbjct: 439 TFEYSDG 444

[Close]
BLAST of Lsi01G020230 vs. NCBI nr
Match: gi|778694762|ref|XP_011653860.1| (PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 6.2e-67
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDAD
Sbjct: 328 EVEELYAGEVGYLSASIRSVADARVGDTITHHGRKAEDSLPGYEEATPMVFCGLFPVDAD 387

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 388 QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 447

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNCVNGDTV
Sbjct: 448 TAPSVVYRVNCVNGDTV 464

[Close]
BLAST of Lsi01G020230 vs. NCBI nr
Match: gi|700199572|gb|KGN54730.1| (hypothetical protein Csa_4G437010 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 6.2e-67
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDAD
Sbjct: 21  EVEELYAGEVGYLSASIRSVADARVGDTITHHGRKAEDSLPGYEEATPMVFCGLFPVDAD 80

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 81  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 140

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNCVNGDTV
Sbjct: 141 TAPSVVYRVNCVNGDTV 157

[Close]
BLAST of Lsi01G020230 vs. NCBI nr
Match: gi|590714705|ref|XP_007049988.1| (Small GTP-binding protein isoform 1 [Theobroma cacao])

HSP 1 Score: 262.3 bits (669), Expect = 6.2e-67
Identity = 127/139 (91.37%), Postives = 132/139 (94.96%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           +++    G VGYLSASIRSVADARVGDTITHYGR+AE SLPGYEE TPMVFCGLFPVDAD
Sbjct: 327 QVEELYAGEVGYLSASIRSVADARVGDTITHYGRRAESSLPGYEEATPMVFCGLFPVDAD 386

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 387 QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 446

Query: 159 TAPSVVYRVNCVNGDTVIS 178
           TAPSVVYRVNC+NGDTVIS
Sbjct: 447 TAPSVVYRVNCINGDTVIS 465

[Close]
BLAST of Lsi01G020230 vs. NCBI nr
Match: gi|659069363|ref|XP_008449446.1| (PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 1.4e-66
Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDAD
Sbjct: 335 EVEELYAGEVGYLSASIRSVADARVGDTITHHGRKAEDSLPGYEEATPMVFCGLFPVDAD 394

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETS+AMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 395 QFPELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 454

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNCVNGDTV
Sbjct: 455 TAPSVVYRVNCVNGDTV 471

[Close]
BLAST of Lsi01G020230 vs. NCBI nr
Match: gi|659069361|ref|XP_008449438.1| (PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 1.4e-66
Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = 1 

Query: 39  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDAD 98
           E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDAD
Sbjct: 328 EVEELYAGEVGYLSASIRSVADARVGDTITHHGRKAEDSLPGYEEATPMVFCGLFPVDAD 387

Query: 99  QFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 158
           QFPELRDALEKLQLNDAALKFEPETS+AMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT
Sbjct: 388 QFPELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYNLSLIT 447

Query: 159 TAPSVVYRVNCVNGDTV 176
           TAPSVVYRVNCVNGDTV
Sbjct: 448 TAPSVVYRVNCVNGDTV 464

The following BLAST results are available for this feature:
BLAST of Lsi01G020230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GUFP_VITVI6.2e-6793.08Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera GN=VITISV_01325... [more]
GUFP_RICCO6.8e-6688.32Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis GN=RCOM_17673... [more]
GUFP_ARATH5.8e-6590.84Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana GN=At5g08... [more]
GUFP_POPTR4.9e-6487.59Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDR... [more]
GUFP_PHYPA1.3e-5678.83Translation factor GUF1 homolog, chloroplastic OS=Physcomitrella patens subsp. p... [more]
BLAST of Lsi01G020230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYH8_CUCSA4.3e-6793.43Translation factor GUF1 homolog, mitochondrial OS=Cucumis sativus GN=Csa_4G43701... [more]
A0A061DN87_THECC4.3e-6791.37Translation factor GUF1 homolog, chloroplastic OS=Theobroma cacao GN=TCM_003433 ... [more]
A0A061DQ14_THECC3.6e-6691.24Translation factor GUF1 homolog, mitochondrial OS=Theobroma cacao GN=TCM_003433 ... [more]
A0A0B2RFV8_GLYSO4.8e-6687.94Translation factor GUF1 homolog, mitochondrial OS=Glycine soja GN=glysoja_012859... [more]
A0A058ZVZ0_EUCGR8.1e-6691.24Translation factor GUF1 homolog, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_... [more]
BLAST of Lsi01G020230 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08650.13.3e-6690.84 Small GTP-binding protein[more]
AT5G39900.17.1e-2945.67 Small GTP-binding protein[more]
BLAST of Lsi01G020230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778694762|ref|XP_011653860.1|6.2e-6793.43PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis sativus][more]
gi|700199572|gb|KGN54730.1|6.2e-6793.43hypothetical protein Csa_4G437010 [Cucumis sativus][more]
gi|590714705|ref|XP_007049988.1|6.2e-6791.37Small GTP-binding protein isoform 1 [Theobroma cacao][more]
gi|659069363|ref|XP_008449446.1|1.4e-6692.70PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis me... [more]
gi|659069361|ref|XP_008449438.1|1.4e-6692.70PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis me... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009022EFG_III
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045727 positive regulation of translation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0015979 photosynthesis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009902 chloroplast relocation
biological_process GO:0015995 chlorophyll biosynthetic process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0043022 ribosome binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G020230.1Lsi01G020230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009022Elongation factor G, III-V domainunknownSSF54980EF-G C-terminal domain-likecoord: 85..163
score: 4.68
NoneNo IPR availableGENE3DG3DSA:3.30.70.870coord: 85..162
score: 7.7
NoneNo IPR availablePANTHERPTHR23115TRANSLATION FACTORcoord: 46..166
score: 7.1
NoneNo IPR availablePANTHERPTHR23115:SF189TRANSLATION FACTOR GUF1 HOMOLOG, CHLOROPLASTICcoord: 46..166
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G020230CmoCh07G014220Cucurbita moschata (Rifu)cmolsiB775
Lsi01G020230Cla97C04G070360Watermelon (97103) v2lsiwmbB136
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G020230Silver-seed gourdcarlsiB430
Lsi01G020230Cucumber (Chinese Long) v3cuclsiB274
Lsi01G020230Wax gourdlsiwgoB173
Lsi01G020230Cucumber (Gy14) v1cgylsiB283
Lsi01G020230Cucurbita maxima (Rimu)cmalsiB789
Lsi01G020230Cucurbita maxima (Rimu)cmalsiB795
Lsi01G020230Cucurbita moschata (Rifu)cmolsiB589
Lsi01G020230Cucurbita pepo (Zucchini)cpelsiB399
Lsi01G020230Wild cucumber (PI 183967)cpilsiB249
Lsi01G020230Cucumber (Chinese Long) v2culsiB251
Lsi01G020230Melon (DHL92) v3.5.1lsimeB153
Lsi01G020230Watermelon (Charleston Gray)lsiwcgB138
Lsi01G020230Watermelon (97103) v1lsiwmB149
Lsi01G020230Cucumber (Gy14) v2cgyblsiB238
Lsi01G020230Melon (DHL92) v3.6.1lsimedB160