Lsi01G020050 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G020050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ATP-dependent zinc metalloprotease FtsH
Location	chr01 : 26998819 .. 27005168 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAACAAAAAACCTCACTCATGCCTTCTGCTCCTCGGTCTGTGCTGCTAAAAACTCTTGCTTAAAAAACCTCTTCCTCATCCAAGCGAGGCGGCGGCGTAGATGGCAGGCGGCAGGTCGCCGTCCGTTGTGAACCGTGGTTTCCTTCTTCAGCGAATTAAGTCTTGTCGCCACAAATGTCCCACCGTCGACGATATCGTCGATCATCTGCAGTCCACGTACAGGGACTACCGAGGCCTCAAGAAGTCACCCTTCACTTCAATCGTCCAACAAACCCTCGATTCGCATCTCAAAAATAACCCTAAATCCACTCCATCTTCTTCCACACCCCACAAAATCAAGCGCCAATTACAAGACTCTGAAGACGAAGACGCCGATTGCAGTACCATTGGAAAGAAGCGGCTCAAGAGAGTCGATGTAGGCGAACAGAGGTTGCAGAGTATGGAGAATATGCACCTCAGGAGGATTAAACACAGAAATCAGGATGATTCGTCTTCGTCTTCTTCGTCAGATTCTGCTAATAGTGGCGATGGAGCGGTGTCGACGTCGGAGGATGCCATATATGGGGAAAAAGTAGAGCCAGAGTTTGATTTGATGAAGTCGATGCTTCGAACATCTTATGCGGAGTCGAAGAAATTGAAGAATGAGCATTTGGAGAAGAGTATGGAGTTGGAAGTTGCCCTAGATAATAAGGTTGCTGAAAAAATTGATGTGGGGAATGAAGGGATAGGCAAGGGGATAATGAGGAAGGAGAAGCAGGGTTCTCTTAATAGGGCATACATGGAGACAGGGGAAGGGAAGGAGGAAGGGCCTTGGTTTAAGGATTTGGGAGGGATGAAGAGCGTGCTAGACGAATTGAAGATGGAGGTTATTGTACCACTCTACCATCCCCAGCTCCCACTGTGGTTGGGAGTTCGGCCGATGGCTGGAATTTTGCTTCATGGACCCCCTGGTTGTGGGAAGACTAAATTGGCTCATGCCATTGCCAATGAAACTGGTGTGCCTTTTTATAAGATTTCCGCAACGGAGGTCGTGTCGGGTGTATCAGGTACATGTTCATCTTGCAAAATTAGTAGAAATTGTGTGTTTGAATGGTAAAACCTTATGGTTATATGAAATTGTGTGTTTGAATGGTAAAACCTTATGGCAATTTTGAATTTGTGGTATTTATTTGTAGTATATATACAAATGTAATGGATTTATTAAGCTGGTGAAAAGTTTTCTCTAAAACTTCAATCATAGCAACTTTGTACACTTTTACTACTGTTTACAAGTTCAACTTTCAATGTTGCTGAATATGTTTTTTATTTATGTTTGATTATTAAGAATAATTGTATTATTTATTTATTTATATTTTTTTTGGAACTTTTAGGTGCGTCTGAAGAAAATATTAGAGAACTCTTTTCCAAAGCCTATAGGACAACACCATCAATTGTTTTTATTGATGAGATTGATGCAATTGCATCAAAGAGAGAAAATCTGCAGAGAGAAATGGAGAGACGGATTGTAACACAATTAATGACTTGCATGGATGGGTTCCACAAGCTTGTAGATTCTAATGATGCAAGTTCAAAGAATGATAATTCCAATGTTAGACCAGGCTATGTTCTTGTAATTGGTGCTACCAATAGACCTGATGCCGTTGATCCTGCGCTAAGGAGGCCCGGACGTTTTGATCGTGAAATCGTATTAGGTGTTCCAGATGAAAATGCAAGGGCTGAAATTCTCTCTGTCCTTACCAGCAACTTGAGACTCGAAGGTTCATTTGATCTTCTCAAAATAGCTAGGGCAACACCAGGGTTTGTTGGAGCTGATTTAACAGCATTGGCTAATAAGGCTGGTAATCTTGCCATGAAGAGAATAATTGATCAAAGAAAATGTGATTTATCTACTGATTTTGTTGATAAGGAACATATAGAAGATTGGTGGAGGCAGCCTTGGTCGCCTGAAGAGTTGGAAAAATTGGCAATAACCATGACTGACTTTGAGGTGATCAAATACGTATATATAAATCATGTTTGGATCCTTGTGAGATTTAATTTCTCTCTTTGAACGTGAATCTTTTTTGTAATTATGTTAGGTCTTATTTTGCTTGATTAGACTCCTGTTCTCTAGAGTGTTCCCTTTTGTGGGATTTGATATTTTCTGATTGCCTTTGCATTCTTTCATTTTTTTTTTCTCAGTGAGAGTTGGTTTTAATAAAAATAGGAACTTTTTGAATGATGCTAATTTCATGTTGAGTTATTGATTTTTTTTTTTAAAATGTTGATATTGACTAGATTTGTCATTCTCTCCGTGGTATTCTATAGGAAGCAATTCAAATGGTGCAACCTTCACTGAGAAGAGAAGGGTTTTCTGCAATTCCCAGTGTAAAGTGGGAGGATGTTGGAGGCTTAGAACAACTAAGAGCAGAGTTTGATCGCTATGTAGTTAGACGTGTAAAGTATCCAGAGGATTATGAGGTATTTATTTTCTGTTTATTTATTTAGAGAATCATTGTTTTTTGGTTCTTTCCCTCTAGCTCTTTCATTGCATAATCTTATTCCTAACCGTCAATTGAATTATTCTTTCATGTTTCTTAATAAAAGCTTGGTTTCTTATTAAAAAAATGTCAATTGAATATTTGAACTAGAGTATAATTCTATTGTAGTGCTTTGGTTTAGGACTTTAAATTTTCCAAAATCCAATTAATTAGAGAAGAAATTTTATTCTGACACTTTGGTTTTGGTTTTTCAAGCTTCATGCTCGTGGGTTTGTAAATTTCATTTTACCAATAAAATAGTAAGGCTTGTTTGGTATGCAATTTGGACTTTGTTTTAGGTTTTTTAGATTCATGACATCAAATGGATTCAATGAATATTTGTTAAGCAAACTTATTTTTTAAAAATGCTTTTGGATTTTGTGATTGAAATAGTAGAAATTAACCATCATGGGTTGACGTAGTGGTAAAAAAGGAGACAAAGTCTCAATAATTGGCTAAGAGTTTATAGGTTGAATCTATGGTGGCCTAGGTACCTAGAAATTAATTTCCTACAAGTTTCTTTGACATCCAAATGTTATAGGGTCAGGCGAGTTGTCCCGTGAGATTAGTCGAGGTGCGCATAAGCTGGCCAAAATTTGAAATTTCGAAATGCAATCAGCAGACTTACATTAAAAAAAGAAAAAGTTATGATAAATATAGTATTTTATGTTGTATACTCATTTCATTTTTGTTCAATTTAAATATGTATAATATAATATATTATTAATTATATGATATTGTAAGATAATAATTATACAAAAGTAATAACATAGAACATGTCTTGAAATGAATTAATATTAGTTGAGTTTTAACCTTATATTTAGTTGGTAATTAGAACATTTGTGTGTTGTGTGTGGGTATATATATATATATATATTTGATAAGGAACAGAAAACCTTTTATTCCAAAAGATCAAGAACAGCCTAACGGGCCAAGGGACAAGAAGTCCGTACCTTACATTCTCACAACAAGGACCACCTCTCAATCTAAATCAATGAGGAAGGTGGAGTAAGAATGATTTGTAACTGTATATTATCAAACACATTCTAGACACTTGTTTAAACTGGATATCAGTTTTTAAATCTATGACTGAACAGAAATGAAAAGTCTTTAATCCAAATTTAATTTCTCTTAATTTTCTTGGTTCTAGGGCTTTGGTGTGAATCTAGAGACTGGATTTTTGTTATATGGTCCTCCAGGATGTGGTAAAACACTAATTGCTAAAGCCATTGCAAATGAGGCTGGAGTCAATTTCATTCACATTAAGGTTCGGTATTTAAGCGACTCAAAGCTTAAAGCAGTAGTTTATCCTATAACATATTTGGGACAATCTTATTGTTCTCATATATATGCGCACACACACACTAACCGTTTCTTGCACAGGGTCCCGAGTTACTAAATAAATATGTTGGAGAAAGTGAACTTGCAGTTCGGACACTATTTAGTCGGGCAAGGGCGTGCTCACCATGCATTCTATTCTTTGATGAAGTATGTGATTCATGCATTACTATTTCAATTTGGTAGTTATTATTGTCGATGATCATTTTTGTATTTGTGCCTTGAGGGTTTGTACAAGGAATTTATATCTACGGTAGCAATTACATTAGTATATAATATTTACCCATGAAGTCGAACAAAACACAACTTTTTAAGAAGGTTCTAAATTAATGTTATTAAAATATTTACTTTTAAGTTAGCTATTATGAGCTAACCTAGTGGTTAATAAGAGAACATCCCGTTGATAAAGGGTTAAAAGATCATGGGATCAATCCATGATGGTTATCTACCTAGGATTTAATATCCTAGGCTATAAGTTTTCTTAACACCCAAATGTTGTAGGATTTTAAGTTGCATCAAATAACATCTTTCATCTTTATTTTAAACTTCATTTGCCACTATTCTTTTCTTTTTGAAGAAAGGAAACAAAGAGATTTTGTAAATTGCAAGGAATAAAGTGCAAAACAGGAACTGTGGGGATCATAAATTTTTCTCCAATACACATTAATAAACAAGAATTCATAGTTACAATGAAATTTACTAAAGCTACCCCAAAAAAAGAGGAGCTCTAAAATGGATGATCACCTAAATGAAAAATCTTCCCTTTTCTCTAGAACGGTTATGAATGTGTGGCTGGTAGATAGAAGAAAGATCTATACATATATATGATTATTATTTTAATACATTACGTTTCCACTTGTTTGTAATTATAGGTGGATGCCTTGACAACAAAACGTGGTAAAGAAGGGGGATGGGTTGTGGAGCGATTATTGAACCAGGTTTGATTAAGTGTCATTCAATGGATTCTTTTTTATTTTCTTGTGCTTCTTGTGTTTCCCTTTTCTATCCTTGTTTTTGTTTTTATTTTCTTTTTCCTCATTGGTTCACTGTGTTGAAATGGATCCACTTCATTTTTGTAGTTGCTCATAGAGTTGGATGGAGCAGAACAACGACGAGGTGTCTTTGTTATTGGTGCTACAAATAGGTAGATCTTTTTTATTTTATTTGCATTGGTAAGCATCATTATAATCTTAATACTCATATAATAAGTTTATTTTGGTAGACCTGAGGTCATGGATCCTGCGGTACTACGACCAGGTAGATTTGGAAAACTTCTTTACGTTCCTCTCCCTGGTCCAACTGAACGAGGGCTCGTTTTAAAAGCCCTTGGAAGGAAGAAACCTATTGATGTTAGTGTAGATCTACTTGCAATTGGACAAATGGAGGCTTGTGAAAATTTTAGTGGGGCGGATCTTGCTGCACTGGTTAGTTTTTACCTTTTTGTGTTTACAGTATTTATATTGTAGAATTATGATTGAACCCAAATATATTGAACTATAAAAGATGATAATGGAATTACAAGATAAACTAAGTGTTCGAGGTACATGAACCCTCCCAATCTTGAAAATACCCTCAAGGCCACCTAATTCATTCCCCAAAATATTGTCCGCCCTCCTCCTTCCCTACTCTCTATTATAACTAACAAGCCTAACAAACTCTCTAACTAATTACTATTATATACTTGCATATAATAATCATGGTTTCTTCTTTAGCATTTTACTTGGGTAAAGGTTGAAGGGAGAATGGTTAAGGTCAAGCTCATGTGATTTTATCATGGCAGATGAATGAAGCTGCAATGGCTGCTTTGGAAGAAAAATTGACATCAGACAGCAGTAATATTGAATCTGCACTATGTACAATCAAGATGATCCATTTTGAGCGTGGGCTAAATAAGATTTCTCCCTCTGTGTCAGAAAAGGTTTTATTTTCCTCATCATATTCAAAACAAAGTATTGTCGTGTATCATTTTCTAACTGTCATTTTTTCTCTTATTCTTCGGTGACAGCAAAAACATTTCTATGAGATTTTGTCGAAGAGCTTAAAAGCCGCTTAATGAACACAAGACAGTTAATTCAACAATATTTGAGAATGGGTACAGTTGCTGGTAAGTTCCAATTCCTAAAGAGTTGTAAGTTTTGCAATTTAATTTGGACTGAAAAGGCAATGTGAGGGGCCTTTTTTCGTGAAGGGCGATTGTTGTTAATTATCATCATGGTTGTCATTTTTTCTTTCCACTTTACAAATGAGAAAATTTTGTTAAACATAAATTTAATTTTGAGCAAAACTGTGCTTTTAGTCATTAAGATAACGTGCCTTTTGCCATGTTGAGTAAGGAAACTACCATACTTTTGTGATACACTGCAAAGGCACATTTTCACTTATGAAAGTTCGAAAATGGATGGAATTTTGATCCTTGAAATTACATTTTTGTTAGTTACATTAGACAAAAATTTGAATGAGGAATCTACAATGCTTGCGTAATA

mRNA sequence

AAAAAAAAAAAAACAAAAAACCTCACTCATGCCTTCTGCTCCTCGGTCTGTGCTGCTAAAAACTCTTGCTTAAAAAACCTCTTCCTCATCCAAGCGAGGCGGCGGCGTAGATGGCAGGCGGCAGGTCGCCGTCCGTTGTGAACCGTGGTTTCCTTCTTCAGCGAATTAAGTCTTGTCGCCACAAATGTCCCACCGTCGACGATATCGTCGATCATCTGCAGTCCACGTACAGGGACTACCGAGGCCTCAAGAAGTCACCCTTCACTTCAATCGTCCAACAAACCCTCGATTCGCATCTCAAAAATAACCCTAAATCCACTCCATCTTCTTCCACACCCCACAAAATCAAGCGCCAATTACAAGACTCTGAAGACGAAGACGCCGATTGCAGTACCATTGGAAAGAAGCGGCTCAAGAGAGTCGATGTAGGCGAACAGAGGTTGCAGAGTATGGAGAATATGCACCTCAGGAGGATTAAACACAGAAATCAGGATGATTCGTCTTCGTCTTCTTCGTCAGATTCTGCTAATAGTGGCGATGGAGCGGTGTCGACGTCGGAGGATGCCATATATGGGGAAAAAGTAGAGCCAGAGTTTGATTTGATGAAGTCGATGCTTCGAACATCTTATGCGGAGTCGAAGAAATTGAAGAATGAGCATTTGGAGAAGAGTATGGAGTTGGAAGTTGCCCTAGATAATAAGGTTGCTGAAAAAATTGATGTGGGGAATGAAGGGATAGGCAAGGGGATAATGAGGAAGGAGAAGCAGGGTTCTCTTAATAGGGCATACATGGAGACAGGGGAAGGGAAGGAGGAAGGGCCTTGGTTTAAGGATTTGGGAGGGATGAAGAGCGTGCTAGACGAATTGAAGATGGAGGTTATTGTACCACTCTACCATCCCCAGCTCCCACTGTGGTTGGGAGTTCGGCCGATGGCTGGAATTTTGCTTCATGGACCCCCTGGTTGTGGGAAGACTAAATTGGCTCATGCCATTGCCAATGAAACTGGTGTGCCTTTTTATAAGATTTCCGCAACGGAGGTCGTGTCGGGTGTATCAGGTGCGTCTGAAGAAAATATTAGAGAACTCTTTTCCAAAGCCTATAGGACAACACCATCAATTGTTTTTATTGATGAGATTGATGCAATTGCATCAAAGAGAGAAAATCTGCAGAGAGAAATGGAGAGACGGATTGTAACACAATTAATGACTTGCATGGATGGGTTCCACAAGCTTGTAGATTCTAATGATGCAAGTTCAAAGAATGATAATTCCAATGTTAGACCAGGCTATGTTCTTGTAATTGGTGCTACCAATAGACCTGATGCCGTTGATCCTGCGCTAAGGAGGCCCGGACGTTTTGATCGTGAAATCGTATTAGGTGTTCCAGATGAAAATGCAAGGGCTGAAATTCTCTCTGTCCTTACCAGCAACTTGAGACTCGAAGGTTCATTTGATCTTCTCAAAATAGCTAGGGCAACACCAGGGTTTGTTGGAGCTGATTTAACAGCATTGGCTAATAAGGCTGGAACATATAGAAGATTGGTGGAGGCAGCCTTGGAAGCAATTCAAATGGTGCAACCTTCACTGAGAAGAGAAGGGTTTTCTGCAATTCCCAGTGTAAAGTGGGAGGATGTTGGAGGCTTAGAACAACTAAGAGCAGAGTTTGATCGCTATGTAGTTAGACGTGTAAAGTATCCAGAGGATTATGAGGTGGATGCCTTGACAACAAAACGTGGTAAAGAAGGGGGATGGGTTGTGGAGCGATTATTGAACCAGTTGCTCATAGAGTTGGATGGAGCAGAACAACGACGAGGTGTCTTTGTTATTGGTGCTACAAATAGACCTGAGGTCATGGATCCTGCGGTACTACGACCAGGTAGATTTGGAAAACTTCTTTACGTTCCTCTCCCTGGTCCAACTGAACGAGGGCTCGTTTTAAAAGCCCTTGGAAGGAAGAAACCTATTGATATGAATGAAGCTGCAATGGCTGCTTTGGAAGAAAAATTGACATCAGACAGCAGTAATATTGAATCTGCACTATGTACAATCAAGATGATCCATTTTGAGCGTGGGCTAAATAAGATTTCTCCCTCTGTGTCAGAAAAGCAAAAACATTTCTATGAGATTTTGTCGAAGAGCTTAAAAGCCGCTTAATGAACACAAGACAGTTAATTCAACAATATTTGAGAATGGGTACAGTTGCTGGTAAGTTCCAATTCCTAAAGAGTTGTAAGTTTTGCAATTTAATTTGGACTGAAAAGGCAATGTGAGGGGCCTTTTTTCGTGAAGGGCGATTGTTGTTAATTATCATCATGGTTGTCATTTTTTCTTTCCACTTTACAAATGAGAAAATTTTGTTAAACATAAATTTAATTTTGAGCAAAACTGTGCTTTTAGTCATTAAGATAACGTGCCTTTTGCCATGTTGAGTAAGGAAACTACCATACTTTTGTGATACACTGCAAAGGCACATTTTCACTTATGAAAGTTCGAAAATGGATGGAATTTTGATCCTTGAAATTACATTTTTGTTAGTTACATTAGACAAAAATTTGAATGAGGAATCTACAATGCTTGCGTAATA

Coding sequence (CDS)

ATGGCAGGCGGCAGGTCGCCGTCCGTTGTGAACCGTGGTTTCCTTCTTCAGCGAATTAAGTCTTGTCGCCACAAATGTCCCACCGTCGACGATATCGTCGATCATCTGCAGTCCACGTACAGGGACTACCGAGGCCTCAAGAAGTCACCCTTCACTTCAATCGTCCAACAAACCCTCGATTCGCATCTCAAAAATAACCCTAAATCCACTCCATCTTCTTCCACACCCCACAAAATCAAGCGCCAATTACAAGACTCTGAAGACGAAGACGCCGATTGCAGTACCATTGGAAAGAAGCGGCTCAAGAGAGTCGATGTAGGCGAACAGAGGTTGCAGAGTATGGAGAATATGCACCTCAGGAGGATTAAACACAGAAATCAGGATGATTCGTCTTCGTCTTCTTCGTCAGATTCTGCTAATAGTGGCGATGGAGCGGTGTCGACGTCGGAGGATGCCATATATGGGGAAAAAGTAGAGCCAGAGTTTGATTTGATGAAGTCGATGCTTCGAACATCTTATGCGGAGTCGAAGAAATTGAAGAATGAGCATTTGGAGAAGAGTATGGAGTTGGAAGTTGCCCTAGATAATAAGGTTGCTGAAAAAATTGATGTGGGGAATGAAGGGATAGGCAAGGGGATAATGAGGAAGGAGAAGCAGGGTTCTCTTAATAGGGCATACATGGAGACAGGGGAAGGGAAGGAGGAAGGGCCTTGGTTTAAGGATTTGGGAGGGATGAAGAGCGTGCTAGACGAATTGAAGATGGAGGTTATTGTACCACTCTACCATCCCCAGCTCCCACTGTGGTTGGGAGTTCGGCCGATGGCTGGAATTTTGCTTCATGGACCCCCTGGTTGTGGGAAGACTAAATTGGCTCATGCCATTGCCAATGAAACTGGTGTGCCTTTTTATAAGATTTCCGCAACGGAGGTCGTGTCGGGTGTATCAGGTGCGTCTGAAGAAAATATTAGAGAACTCTTTTCCAAAGCCTATAGGACAACACCATCAATTGTTTTTATTGATGAGATTGATGCAATTGCATCAAAGAGAGAAAATCTGCAGAGAGAAATGGAGAGACGGATTGTAACACAATTAATGACTTGCATGGATGGGTTCCACAAGCTTGTAGATTCTAATGATGCAAGTTCAAAGAATGATAATTCCAATGTTAGACCAGGCTATGTTCTTGTAATTGGTGCTACCAATAGACCTGATGCCGTTGATCCTGCGCTAAGGAGGCCCGGACGTTTTGATCGTGAAATCGTATTAGGTGTTCCAGATGAAAATGCAAGGGCTGAAATTCTCTCTGTCCTTACCAGCAACTTGAGACTCGAAGGTTCATTTGATCTTCTCAAAATAGCTAGGGCAACACCAGGGTTTGTTGGAGCTGATTTAACAGCATTGGCTAATAAGGCTGGAACATATAGAAGATTGGTGGAGGCAGCCTTGGAAGCAATTCAAATGGTGCAACCTTCACTGAGAAGAGAAGGGTTTTCTGCAATTCCCAGTGTAAAGTGGGAGGATGTTGGAGGCTTAGAACAACTAAGAGCAGAGTTTGATCGCTATGTAGTTAGACGTGTAAAGTATCCAGAGGATTATGAGGTGGATGCCTTGACAACAAAACGTGGTAAAGAAGGGGGATGGGTTGTGGAGCGATTATTGAACCAGTTGCTCATAGAGTTGGATGGAGCAGAACAACGACGAGGTGTCTTTGTTATTGGTGCTACAAATAGACCTGAGGTCATGGATCCTGCGGTACTACGACCAGGTAGATTTGGAAAACTTCTTTACGTTCCTCTCCCTGGTCCAACTGAACGAGGGCTCGTTTTAAAAGCCCTTGGAAGGAAGAAACCTATTGATATGAATGAAGCTGCAATGGCTGCTTTGGAAGAAAAATTGACATCAGACAGCAGTAATATTGAATCTGCACTATGTACAATCAAGATGATCCATTTTGAGCGTGGGCTAAATAAGATTTCTCCCTCTGTGTCAGAAAAGCAAAAACATTTCTATGAGATTTTGTCGAAGAGCTTAAAAGCCGCTTAA

Protein sequence

MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLDSHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLRRIKHRNQDDSSSSSSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMKSMLRTSYAESKKLKNEHLEKSMELEVALDNKVAEKIDVGNEGIGKGIMRKEKQGSLNRAYMETGEGKEEGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGTYRRLVEAALEAIQMVQPSLRREGFSAIPSVKWEDVGGLEQLRAEFDRYVVRRVKYPEDYEVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDPAVLRPGRFGKLLYVPLPGPTERGLVLKALGRKKPIDMNEAAMAALEEKLTSDSSNIESALCTIKMIHFERGLNKISPSVSEKQKHFYEILSKSLKAA

Homology

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BLAST of Lsi01G020050 vs. Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=2 SV=2)

HSP 1 Score: 399.4 bits (1025), Expect = 7.7e-110
Identity = 250/492 (50.81%), Postives = 317/492 (64.43%), Query Frame = 1


Query: 3   GGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLDSH 62
           GG     +NR +L Q + +C     T +DIVD L+S Y ++  L +      V+Q L+  
Sbjct: 9   GGGMGGGINRRYLSQVMDTCGKDLSTAEDIVDDLRSRYGNFARLTRQVLLLNVRQVLN-- 68

Query: 63  LKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLRRI 122
           ++NN +          +K + +D    D + S   +K+ +RVD  E++LQ  E  HLR+ 
Sbjct: 69  VRNNKR----------VKDEDEDDNIGDEEGSASQRKKQRRVDEKEEKLQRAEQSHLRKR 128

Query: 123 KHRNQDDSSSSSSSDSANSGDGAVSTSEDAIYGEKVEP-EFDLMKSMLRTSYAE----SK 182
                  SS SSSS S +SGD  VSTSEDA+YGEK+ P  FDL+   LR +YA+    SK
Sbjct: 129 NMERSVSSSPSSSSSSEDSGD--VSTSEDAVYGEKLSPPRFDLINDSLRDNYAKLNSSSK 188

Query: 183 KLKNEHLEKSMELEVALDNKVAEKIDVGNEGIGKGIMRKEKQGSLNRAYMETGEGKEE-- 242
           K      EK++E+E   +   ++   +G         RKE + SL+ +   TG G  E  
Sbjct: 189 KPIGSPAEKNVEVETVSNKGRSKLATMG--------ARKEAKVSLSLSGA-TGNGDLEVE 248

Query: 243 ---GPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAH 302
              GP FKD GG+K +LDEL+M V+ P+ +P+    +GV+P +GIL HGPPGCGKTKLA+
Sbjct: 249 GTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLAN 308

Query: 303 AIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENL 362
           AIANE GVPFYKISATEV+SGVSGASEENIRELFSKAYRT PSIVFIDEIDAI SKREN 
Sbjct: 309 AIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQ 368

Query: 363 QREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRR 422
           QREME+RIVTQL+TCMDG     D N   S         G+VLVIGATNRPDA+DPALRR
Sbjct: 369 QREMEKRIVTQLLTCMDGPGNKGDKNAPDSS-------AGFVLVIGATNRPDALDPALRR 428

Query: 423 PGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 482
            GRF+ EI L  PDE+ARAEILSV+   LRLEG FD  +IAR TPGFVGADL ++A  AG
Sbjct: 429 SGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAG 468

Query: 483 TYRRLVEAALEA 485
             R+ ++  L++
Sbjct: 489 --RKAIKRILDS 468

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BLAST of Lsi01G020050 vs. Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.4e-65
Identity = 140/328 (42.68%), Postives = 190/328 (57.93%), Query Frame = 1


Query: 239 FKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIANET 298
           ++D+GG+K  L  ++  + +PL HP+L   LG+ P  G+LL+GPPG GKT +A A+ANE 
Sbjct: 181 YEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEV 240

Query: 299 GVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREMER 358
              F  IS  E++S   G SE+ +RE+F +A    PSI+FIDEID+IA KRE +  E+ER
Sbjct: 241 DAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER 300

Query: 359 RIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDR 418
           R+V QL+  MDG     D                 V+VI ATNRPDA+DPALRRPGRFDR
Sbjct: 301 RVVAQLLALMDGLEARGD-----------------VIVIAATNRPDAIDPALRRPGRFDR 360

Query: 419 EIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGTY--RR 478
           EI +GVPD+  R EIL + T  + L    DL ++A  T GFVGADL AL  +A  +  RR
Sbjct: 361 EIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRR 420

Query: 479 LV----------------------EAALEAIQMVQPSLRREGFSAIPSVKWEDVGGLEQL 538
           ++                      E  +EA++ ++PS  RE    +P+VKWED+GGLE  
Sbjct: 421 VLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPSAMREVLVEVPNVKWEDIGGLEHA 480

Query: 539 RAEFDRYVVRRVKYPEDYEVDALTTKRG 543
           + E    V   +KYPE +    +   RG
Sbjct: 481 KQELMEAVEWPLKYPEVFRAANIKPPRG 491

[Close]

BLAST of Lsi01G020050 vs. Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16E9.10c PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.4e-65
Identity = 135/276 (48.91%), Postives = 177/276 (64.13%), Query Frame = 1


Query: 200 EKIDVGNEGIGKGIMRKEKQGSLNRAYMETGEGKEEGPW---FKDLGGMKSVLDELKMEV 259
           EK  VG E I     RK+++   N +  +  E   E P      D+GG+   ++EL   V
Sbjct: 131 EKKSVGQESITGSAKRKDRRSKTNGSKRQKAEANREPPSDISLSDIGGLDDCINELLELV 190

Query: 260 IVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSG 319
            +P+ HP++  + G+ P  G+LLHGPPGCGKT LA+A+ANE GVPF  ISA  +VSG+SG
Sbjct: 191 AMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSG 250

Query: 320 ASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDGFHKLVD 379
            SE+ +RE+F +A    P ++FIDEIDA+  KRE+ QREMERRIV Q +TCMD       
Sbjct: 251 ESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDEL----- 310

Query: 380 SNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARAEILSV 439
              +  K D    +P  VLVIGATNRPD++D ALRR GRFDREI L VP ++AR +IL  
Sbjct: 311 ---SFEKTDG---KP--VLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRT 370

Query: 440 LTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 473
           +   L+L G FD  ++A+ TPG+VGADL AL   AG
Sbjct: 371 MAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAG 393

[Close]

BLAST of Lsi01G020050 vs. Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-64
Identity = 144/339 (42.48%), Postives = 196/339 (57.82%), Query Frame = 1


Query: 228 ETGEGKEEGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGK 287
           E  E K     ++D+GG+K  + +++  + +P+ HP+L   LG+ P  G+LL GPPG GK
Sbjct: 167 EIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGK 226

Query: 288 TKLAHAIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIAS 347
           T LA A+ANE G  FY I+  E++S   G +EEN+R++F +A    PSI+FIDEIDAIA 
Sbjct: 227 TLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAP 286

Query: 348 KRENLQREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVD 407
           KR+    E+ERR+V QL+T MDG                     G V+VIGATNRP+A+D
Sbjct: 287 KRDEATGEVERRLVAQLLTLMDGLKGR-----------------GQVVVIGATNRPNALD 346

Query: 408 PALRRPGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTAL 467
           PALRRPGRFDREIV+GVPD   R EIL + T N+ L    DL  +A  T GFVGADL AL
Sbjct: 347 PALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAAL 406

Query: 468 ANKAG--TYRRLVEAA----------------------LEAIQMVQPSLRREGFSAIPSV 527
             +A     RR++ +                        EA++ V+PS  RE    +P+V
Sbjct: 407 CKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNV 466

Query: 528 KWEDVGGLEQLRAEFDRYVVRRVKYPEDYEVDALTTKRG 543
           KWED+GGLE+++ E    V   +K  E +E   +   +G
Sbjct: 467 KWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKG 488

[Close]

BLAST of Lsi01G020050 vs. Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-64
Identity = 137/328 (41.77%), Postives = 195/328 (59.45%), Query Frame = 1


Query: 239 FKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIANET 298
           + D+GG++  + +++  V +PL HPQL   +GV+P  GILL+GPPG GKT +A A+ANET
Sbjct: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266

Query: 299 GVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREMER 358
           G  F+ I+  E++S ++G SE N+R+ F +A +  PSI+FIDEID+IA KRE    E+ER
Sbjct: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326

Query: 359 RIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDR 418
           RIV+QL+T MDG                      +V+VIGATNRP+++DPALRR GRFDR
Sbjct: 327 RIVSQLLTLMDGLKS-----------------RAHVIVIGATNRPNSIDPALRRFGRFDR 386

Query: 419 EIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGTY---- 478
           EI +GVPDE  R E+L + T N++L    DL +IA+ T G+VGADL AL  +A       
Sbjct: 387 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 446

Query: 479 --------RRLVEAAL------------EAIQMVQPSLRREGFSAIPSVKWEDVGGLEQL 538
                      ++A +             A+    PS  RE    +P+V WED+GGLE +
Sbjct: 447 KMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENV 506

Query: 539 RAEFDRYVVRRVKYPEDYEVDALTTKRG 543
           + E    V   V++PE +E   ++  +G
Sbjct: 507 KRELQETVQYPVEHPEKFEKFGMSPSKG 517

[Close]

BLAST of Lsi01G020050 vs. TrEMBL
Match: A0A0A0L3U4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G506870 PE=4 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 1.0e-257
Identity = 480/577 (83.19%), Postives = 500/577 (86.66%), Query Frame = 1


Query: 1   MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLD 60
           MAGG+SPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYR LKKSPFTSIVQQTLD
Sbjct: 1   MAGGKSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRTLKKSPFTSIVQQTLD 60

Query: 61  SHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLR 120
           SHL   PKS PSSSTP KIKR+LQDS+ EDADCSTIGKKR KRVDVGEQRLQ+MENMHLR
Sbjct: 61  SHLNKTPKSIPSSSTPTKIKRRLQDSKTEDADCSTIGKKRPKRVDVGEQRLQNMENMHLR 120

Query: 121 RIKHRNQDDSSSS----SSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMKSMLRTSYAES 180
           RI+H NQDDSSSS    SS+ S NSGDGAVSTSEDAIYGEKVEPEFDLMK MLRTSYAES
Sbjct: 121 RIQHNNQDDSSSSLSSSSSTGSGNSGDGAVSTSEDAIYGEKVEPEFDLMKLMLRTSYAES 180

Query: 181 KKLKNEHLEKSMELEVALDNKVAEKIDVGNEG-IGKGIMRKEKQGSLNRAYMETGEGKEE 240
           KKLKNEHLEKSMELEVA+D+KVAEKI+VGNEG   K I RKEKQ SLNR  +E       
Sbjct: 181 KKLKNEHLEKSMELEVAIDDKVAEKINVGNEGNANKEISRKEKQSSLNREEIE------- 240

Query: 241 GPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIA 300
           GPWFKDLGGMKSVLDELKMEVIVPLYHPQ+PLWLGVRPMAGILLHGPPGCGKTKLAHAIA
Sbjct: 241 GPWFKDLGGMKSVLDELKMEVIVPLYHPQVPLWLGVRPMAGILLHGPPGCGKTKLAHAIA 300

Query: 301 NETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQRE 360
           NETGVPFYKISATE++SGVSGASEENIRELFSKAYRT PSIVFIDEIDAIASKRENLQRE
Sbjct: 301 NETGVPFYKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQRE 360

Query: 361 MERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGR 420
           ME+RIVTQLMTCMDGFHKLVDS DASSK+DNSNVRPGYVLVIGATNRPDAVDPALRRPGR
Sbjct: 361 MEKRIVTQLMTCMDGFHKLVDSKDASSKDDNSNVRPGYVLVIGATNRPDAVDPALRRPGR 420

Query: 421 FDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG--T 480
           FDREIVLGVPDENARAEIL+VLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG   
Sbjct: 421 FDREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGNLA 480

Query: 481 YRRLVEAAL-------------------------------------EAIQMVQPSLRREG 534
            +R+++                                        EAIQMVQPSLRREG
Sbjct: 481 MKRIIDQRKCELSTDCAANEHIEDWWRQPWLPEEMEKLAITMIDFEEAIQMVQPSLRREG 540

[Close]

BLAST of Lsi01G020050 vs. TrEMBL
Match: A0A061F3G0_THECC (Cell division control protein 48 C isoform 1 OS=Theobroma cacao GN=TCM_030531 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 2.8e-159
Identity = 342/588 (58.16%), Postives = 399/588 (67.86%), Query Frame = 1


Query: 1   MAGGRSPS--VVNRGFLLQRIKSCRHKC-PTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQ 60
           + GGRSPS  V+N+  LL+RI+SC+H    TVD++V+HLQ+ Y DYR +K+ P T  V+Q
Sbjct: 5   LGGGRSPSYSVLNQRILLRRIQSCQHNARSTVDEMVEHLQTNYPDYRRIKRQPLTRNVRQ 64

Query: 61  TLDSHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGK---------KRLKRVDVGE 120
            L + L    K+T  SS      +   D  DE A   +            K+ +R D  E
Sbjct: 65  ALQA-LHPCSKNTQKSSLSVSDFKFDDDGRDEHAVAPSSSSSPPPPSRSWKKPRRTDETE 124

Query: 121 QRLQSMENMHLRR--IKHRNQDDSSSSSSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMK 180
            RLQ ME++HL+R   +H++  +S S SSS S    DGAVSTSEDAIYG+K EP+FDLMK
Sbjct: 125 GRLQRMEDLHLQRRQSQHQSDSESDSESSSSSEEEEDGAVSTSEDAIYGQKEEPKFDLMK 184

Query: 181 SMLRTSYAESKKLKNEHLEKSMELEVALDNKVAEKIDVGNEGIGKGIMRKEKQ--GSLNR 240
           SMLR  Y +    K +  EK++E+EVA  NK+  KID+ N       +++E +   S+  
Sbjct: 185 SMLRQGYTQCNSSKWKLEEKNIEMEVA-SNKLRNKIDMTNANKVSAELKEETKVSASVGA 244

Query: 241 AYMETGEGK-EEGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPP 300
           A  +  E K +EGP F+DLGGM  VL+ELKMEVIVPLYHP LP WLGVRPMAGILLHGPP
Sbjct: 245 AAADGVEVKGKEGPRFRDLGGMGGVLEELKMEVIVPLYHPHLPRWLGVRPMAGILLHGPP 304

Query: 301 GCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEID 360
           GCGKTKLAHAIANETGVPFYKISA EVVSGVSGASEENIRELFSKAYRT PSIVFIDEID
Sbjct: 305 GCGKTKLAHAIANETGVPFYKISAPEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEID 364

Query: 361 AIASKRENLQREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRP 420
           AIASKRENLQREMERRIVTQLMTCMD  H+LV  ND  S  ++S+ +PGYVLVIGATNRP
Sbjct: 365 AIASKRENLQREMERRIVTQLMTCMDESHRLVQPNDKESNLESSDSKPGYVLVIGATNRP 424

Query: 421 DAVDPALRRPGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARA-------- 480
           DAVDPALRRPGRFDREIVLGVPDE AR EILSVLT NLRLEGSFDLLKIARA        
Sbjct: 425 DAVDPALRRPGRFDREIVLGVPDEIARHEILSVLTRNLRLEGSFDLLKIARATPGFVGAD 484

Query: 481 ------TPGFVGADLTALANKAGTYRRLVEAAL-------------------------EA 533
                   G +         K    R  ++                            EA
Sbjct: 485 LAALANKAGNLAMKRIIDQRKHEFSRESIDEEQADEWWRQPWLPEEMEKLTITMADFEEA 544

[Close]

BLAST of Lsi01G020050 vs. TrEMBL
Match: A0A0D2VFN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G148700 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 1.5e-157
Identity = 338/587 (57.58%), Postives = 397/587 (67.63%), Query Frame = 1


Query: 3   GGRSPS---VVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTL 62
           G RSP+   V+NR  L +R++SC+    TV++IVDHL++ Y DY+ +K+ PFT  V+  L
Sbjct: 7   GCRSPAASGVLNRRILSRRLESCQQTYSTVEEIVDHLRTNYPDYKRMKQQPFTIAVRHAL 66

Query: 63  DSHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIG--------KKRLKRVDVGEQRL 122
            S  K   K    S +P  +       E E A  ++          +K+ +  D  E+RL
Sbjct: 67  RSSSKCTQKP---SHSPSNLNFDADSDEHEHAIAASSSSSLPHSRSRKKARVTDAKEERL 126

Query: 123 QSMENMHLRRIKHRNQD-DSSSSSSSDSANSG---DGAVSTSEDAIYGEKVEPEFDLMKS 182
           Q  E +H+   K RNQ  DSSS+S +DS++S    D  VSTSEDA+YGEK EP+FDLMKS
Sbjct: 127 QHFEELHIE--KRRNQRYDSSSNSDTDSSSSSEEVDEGVSTSEDAVYGEKEEPKFDLMKS 186

Query: 183 MLRTSYAESKKLKNEHLEKSMELEVALDNKVAEKIDVGNEGIGKGIMRKEKQGSLNRAYM 242
           MLR  Y +S   K +  EK+ME+EVA+ NK  +KID+ N G   G  +K+ + S   A  
Sbjct: 187 MLRQGYNQSNNTKPKLEEKNMEMEVAI-NKTKDKIDMTNGG---GTAKKDAKASFTAAAD 246

Query: 243 ETG---EGKEEGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPG 302
             G    GKE GP F+DLGGMK VL+ELKMEVIVPLYHP LP WLGVRPMAGILLHGPPG
Sbjct: 247 ADGMEVNGKE-GPRFRDLGGMKEVLEELKMEVIVPLYHPHLPRWLGVRPMAGILLHGPPG 306

Query: 303 CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDA 362
           CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIR+LFSKAYRT PSIVFIDEIDA
Sbjct: 307 CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDA 366

Query: 363 IASKRENLQREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPD 422
           IASKRENLQREMERRIVTQLMTCMD  H+LV  ND  S  +NS+ +PGYVLVIGATNRPD
Sbjct: 367 IASKRENLQREMERRIVTQLMTCMDESHRLVQPNDKDSGLENSDSKPGYVLVIGATNRPD 426

Query: 423 AVDPALRRPGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARA--------- 482
           AVDPALRRPGRFDREIVLGVPDENAR EILSVLT NLRLEGSFDLLKIARA         
Sbjct: 427 AVDPALRRPGRFDREIVLGVPDENARLEILSVLTGNLRLEGSFDLLKIARATPGFVGADL 486

Query: 483 -----TPGFVGADLTALANKAGTYRRLVEAAL-------------------------EAI 533
                  G +         K    R  ++                            EA 
Sbjct: 487 SALANKAGNLAMKRIIDQRKHEFSREPIDDEQADQWWRQPWLPDEMEKLAITMADFEEAT 546

[Close]

BLAST of Lsi01G020050 vs. TrEMBL
Match: A0A0D2SEH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G148700 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 1.5e-157
Identity = 338/587 (57.58%), Postives = 397/587 (67.63%), Query Frame = 1


Query: 3   GGRSPS---VVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTL 62
           G RSP+   V+NR  L +R++SC+    TV++IVDHL++ Y DY+ +K+ PFT  V+  L
Sbjct: 7   GCRSPAASGVLNRRILSRRLESCQQTYSTVEEIVDHLRTNYPDYKRMKQQPFTIAVRHAL 66

Query: 63  DSHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIG--------KKRLKRVDVGEQRL 122
            S  K   K    S +P  +       E E A  ++          +K+ +  D  E+RL
Sbjct: 67  RSSSKCTQKP---SHSPSNLNFDADSDEHEHAIAASSSSSLPHSRSRKKARVTDAKEERL 126

Query: 123 QSMENMHLRRIKHRNQD-DSSSSSSSDSANSG---DGAVSTSEDAIYGEKVEPEFDLMKS 182
           Q  E +H+   K RNQ  DSSS+S +DS++S    D  VSTSEDA+YGEK EP+FDLMKS
Sbjct: 127 QHFEELHIE--KRRNQRYDSSSNSDTDSSSSSEEVDEGVSTSEDAVYGEKEEPKFDLMKS 186

Query: 183 MLRTSYAESKKLKNEHLEKSMELEVALDNKVAEKIDVGNEGIGKGIMRKEKQGSLNRAYM 242
           MLR  Y +S   K +  EK+ME+EVA+ NK  +KID+ N G   G  +K+ + S   A  
Sbjct: 187 MLRQGYNQSNNTKPKLEEKNMEMEVAI-NKTKDKIDMTNGG---GTAKKDAKASFTAAAD 246

Query: 243 ETG---EGKEEGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPG 302
             G    GKE GP F+DLGGMK VL+ELKMEVIVPLYHP LP WLGVRPMAGILLHGPPG
Sbjct: 247 ADGMEVNGKE-GPRFRDLGGMKEVLEELKMEVIVPLYHPHLPRWLGVRPMAGILLHGPPG 306

Query: 303 CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDA 362
           CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIR+LFSKAYRT PSIVFIDEIDA
Sbjct: 307 CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDA 366

Query: 363 IASKRENLQREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPD 422
           IASKRENLQREMERRIVTQLMTCMD  H+LV  ND  S  +NS+ +PGYVLVIGATNRPD
Sbjct: 367 IASKRENLQREMERRIVTQLMTCMDESHRLVQPNDKDSGLENSDSKPGYVLVIGATNRPD 426

Query: 423 AVDPALRRPGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARA--------- 482
           AVDPALRRPGRFDREIVLGVPDENAR EILSVLT NLRLEGSFDLLKIARA         
Sbjct: 427 AVDPALRRPGRFDREIVLGVPDENARLEILSVLTGNLRLEGSFDLLKIARATPGFVGADL 486

Query: 483 -----TPGFVGADLTALANKAGTYRRLVEAAL-------------------------EAI 533
                  G +         K    R  ++                            EA 
Sbjct: 487 SALANKAGNLAMKRIIDQRKHEFSREPIDDEQADQWWRQPWLPDEMEKLAITMADFEEAT 546

[Close]

BLAST of Lsi01G020050 vs. TrEMBL
Match: A0A0D2U1N8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G148700 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 1.5e-157
Identity = 338/587 (57.58%), Postives = 397/587 (67.63%), Query Frame = 1


Query: 3   GGRSPS---VVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTL 62
           G RSP+   V+NR  L +R++SC+    TV++IVDHL++ Y DY+ +K+ PFT  V+  L
Sbjct: 7   GCRSPAASGVLNRRILSRRLESCQQTYSTVEEIVDHLRTNYPDYKRMKQQPFTIAVRHAL 66

Query: 63  DSHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIG--------KKRLKRVDVGEQRL 122
            S  K   K    S +P  +       E E A  ++          +K+ +  D  E+RL
Sbjct: 67  RSSSKCTQKP---SHSPSNLNFDADSDEHEHAIAASSSSSLPHSRSRKKARVTDAKEERL 126

Query: 123 QSMENMHLRRIKHRNQD-DSSSSSSSDSANSG---DGAVSTSEDAIYGEKVEPEFDLMKS 182
           Q  E +H+   K RNQ  DSSS+S +DS++S    D  VSTSEDA+YGEK EP+FDLMKS
Sbjct: 127 QHFEELHIE--KRRNQRYDSSSNSDTDSSSSSEEVDEGVSTSEDAVYGEKEEPKFDLMKS 186

Query: 183 MLRTSYAESKKLKNEHLEKSMELEVALDNKVAEKIDVGNEGIGKGIMRKEKQGSLNRAYM 242
           MLR  Y +S   K +  EK+ME+EVA+ NK  +KID+ N G   G  +K+ + S   A  
Sbjct: 187 MLRQGYNQSNNTKPKLEEKNMEMEVAI-NKTKDKIDMTNGG---GTAKKDAKASFTAAAD 246

Query: 243 ETG---EGKEEGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPG 302
             G    GKE GP F+DLGGMK VL+ELKMEVIVPLYHP LP WLGVRPMAGILLHGPPG
Sbjct: 247 ADGMEVNGKE-GPRFRDLGGMKEVLEELKMEVIVPLYHPHLPRWLGVRPMAGILLHGPPG 306

Query: 303 CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDA 362
           CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIR+LFSKAYRT PSIVFIDEIDA
Sbjct: 307 CGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDA 366

Query: 363 IASKRENLQREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPD 422
           IASKRENLQREMERRIVTQLMTCMD  H+LV  ND  S  +NS+ +PGYVLVIGATNRPD
Sbjct: 367 IASKRENLQREMERRIVTQLMTCMDESHRLVQPNDKDSGLENSDSKPGYVLVIGATNRPD 426

Query: 423 AVDPALRRPGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARA--------- 482
           AVDPALRRPGRFDREIVLGVPDENAR EILSVLT NLRLEGSFDLLKIARA         
Sbjct: 427 AVDPALRRPGRFDREIVLGVPDENARLEILSVLTGNLRLEGSFDLLKIARATPGFVGADL 486

Query: 483 -----TPGFVGADLTALANKAGTYRRLVEAAL-------------------------EAI 533
                  G +         K    R  ++                            EA 
Sbjct: 487 SALANKAGNLAMKRIIDQRKHEFSREPIDDEQADQWWRQPWLPDEMEKLAITMADFEEAT 546

[Close]

BLAST of Lsi01G020050 vs. TAIR10
Match: AT3G01610.1 (AT3G01610.1 cell division cycle 48C)

HSP 1 Score: 399.4 bits (1025), Expect = 4.3e-111
Identity = 250/492 (50.81%), Postives = 317/492 (64.43%), Query Frame = 1


Query: 3   GGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLDSH 62
           GG     +NR +L Q + +C     T +DIVD L+S Y ++  L +      V+Q L+  
Sbjct: 9   GGGMGGGINRRYLSQVMDTCGKDLSTAEDIVDDLRSRYGNFARLTRQVLLLNVRQVLN-- 68

Query: 63  LKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLRRI 122
           ++NN +          +K + +D    D + S   +K+ +RVD  E++LQ  E  HLR+ 
Sbjct: 69  VRNNKR----------VKDEDEDDNIGDEEGSASQRKKQRRVDEKEEKLQRAEQSHLRKR 128

Query: 123 KHRNQDDSSSSSSSDSANSGDGAVSTSEDAIYGEKVEP-EFDLMKSMLRTSYAE----SK 182
                  SS SSSS S +SGD  VSTSEDA+YGEK+ P  FDL+   LR +YA+    SK
Sbjct: 129 NMERSVSSSPSSSSSSEDSGD--VSTSEDAVYGEKLSPPRFDLINDSLRDNYAKLNSSSK 188

Query: 183 KLKNEHLEKSMELEVALDNKVAEKIDVGNEGIGKGIMRKEKQGSLNRAYMETGEGKEE-- 242
           K      EK++E+E   +   ++   +G         RKE + SL+ +   TG G  E  
Sbjct: 189 KPIGSPAEKNVEVETVSNKGRSKLATMG--------ARKEAKVSLSLSGA-TGNGDLEVE 248

Query: 243 ---GPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAH 302
              GP FKD GG+K +LDEL+M V+ P+ +P+    +GV+P +GIL HGPPGCGKTKLA+
Sbjct: 249 GTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLAN 308

Query: 303 AIANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENL 362
           AIANE GVPFYKISATEV+SGVSGASEENIRELFSKAYRT PSIVFIDEIDAI SKREN 
Sbjct: 309 AIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQ 368

Query: 363 QREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRR 422
           QREME+RIVTQL+TCMDG     D N   S         G+VLVIGATNRPDA+DPALRR
Sbjct: 369 QREMEKRIVTQLLTCMDGPGNKGDKNAPDSS-------AGFVLVIGATNRPDALDPALRR 428

Query: 423 PGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 482
            GRF+ EI L  PDE+ARAEILSV+   LRLEG FD  +IAR TPGFVGADL ++A  AG
Sbjct: 429 SGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAG 468

Query: 483 TYRRLVEAALEA 485
             R+ ++  L++
Sbjct: 489 --RKAIKRILDS 468

[Close]

BLAST of Lsi01G020050 vs. TAIR10
Match: AT5G03340.1 (AT5G03340.1 ATPase, AAA-type, CDC48 protein)

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-64
Identity = 134/330 (40.61%), Postives = 195/330 (59.09%), Query Frame = 1


Query: 239 FKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIANET 298
           + D+GG++  + +++  V +PL HPQL   +GV+P  GILL+GPPG GKT +A A+ANET
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265

Query: 299 GVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREMER 358
           G  F+ I+  E++S ++G SE N+R+ F +A +  PSI+FIDEID+IA KRE    E+ER
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325

Query: 359 RIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDR 418
           RIV+QL+T MDG                      +V+V+GATNRP+++DPALRR GRFDR
Sbjct: 326 RIVSQLLTLMDGLKS-----------------RAHVIVMGATNRPNSIDPALRRFGRFDR 385

Query: 419 EIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGTYRRLV 478
           EI +GVPDE  R E+L + T N++L    DL +I++ T G+VGADL AL  +A    + +
Sbjct: 386 EIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAAL--QCI 445

Query: 479 EAALEAIQM--------------------------VQPSLRREGFSAIPSVKWEDVGGLE 538
              ++ I +                            PS  RE    +P+V WED+GGLE
Sbjct: 446 REKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLE 505

Query: 539 QLRAEFDRYVVRRVKYPEDYEVDALTTKRG 543
            ++ E    V   V++PE +E   ++  +G
Sbjct: 506 NVKRELQETVQYPVEHPEKFEKFGMSPSKG 516

[Close]

BLAST of Lsi01G020050 vs. TAIR10
Match: AT3G53230.1 (AT3G53230.1 ATPase, AAA-type, CDC48 protein)

HSP 1 Score: 245.0 bits (624), Expect = 1.4e-64
Identity = 133/330 (40.30%), Postives = 195/330 (59.09%), Query Frame = 1


Query: 239 FKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIANET 298
           + D+GG++  + +++  V +PL HPQL   +GV+P  GILL+GPPG GKT +A A+ANET
Sbjct: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266

Query: 299 GVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREMER 358
           G  F+ I+  E++S ++G SE N+R+ F +A +  PSI+FIDEID+IA KRE    E+ER
Sbjct: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326

Query: 359 RIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDR 418
           RIV+QL+T MDG                      +V+V+GATNRP+++DPALRR GRFDR
Sbjct: 327 RIVSQLLTLMDGLKS-----------------RAHVIVMGATNRPNSIDPALRRFGRFDR 386

Query: 419 EIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGTYRRLV 478
           EI +GVPDE  R E+L + T N++L    DL ++++ T G+VGADL AL  +A    + +
Sbjct: 387 EIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAAL--QCI 446

Query: 479 EAALEAIQM--------------------------VQPSLRREGFSAIPSVKWEDVGGLE 538
              ++ I +                            PS  RE    +P+V WED+GGLE
Sbjct: 447 REKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLE 506

Query: 539 QLRAEFDRYVVRRVKYPEDYEVDALTTKRG 543
            ++ E    V   V++PE +E   ++  +G
Sbjct: 507 NVKRELQETVQYPVEHPEKFEKFGMSPSKG 517

[Close]

BLAST of Lsi01G020050 vs. TAIR10
Match: AT3G09840.1 (AT3G09840.1 cell division cycle 48)

HSP 1 Score: 243.4 bits (620), Expect = 4.0e-64
Identity = 133/330 (40.30%), Postives = 194/330 (58.79%), Query Frame = 1


Query: 239 FKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIANET 298
           + D+GG++  + +++  V +PL HPQL   +GV+P  GILL+GPPG GKT +A A+ANET
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265

Query: 299 GVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREMER 358
           G  F+ I+  E++S ++G SE N+R+ F +A +  PSI+FIDEID+IA KRE    E+ER
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325

Query: 359 RIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDR 418
           RIV+QL+T MDG                      +V+V+GATNRP+++DPALRR GRFDR
Sbjct: 326 RIVSQLLTLMDGLKS-----------------RAHVIVMGATNRPNSIDPALRRFGRFDR 385

Query: 419 EIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGTYRRLV 478
           EI +GVPDE  R E+L + T N++L    DL +I++ T G+VGADL AL  +A    + +
Sbjct: 386 EIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAAL--QCI 445

Query: 479 EAALEAIQM--------------------------VQPSLRREGFSAIPSVKWEDVGGLE 538
              ++ I +                            PS  RE    +P+V W D+GGLE
Sbjct: 446 REKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLE 505

Query: 539 QLRAEFDRYVVRRVKYPEDYEVDALTTKRG 543
            ++ E    V   V++PE +E   ++  +G
Sbjct: 506 NVKRELQETVQYPVEHPEKFEKFGMSPSKG 516

[Close]

BLAST of Lsi01G020050 vs. TAIR10
Match: AT2G03670.1 (AT2G03670.1 cell division cycle 48B)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-41
Identity = 114/324 (35.19%), Postives = 170/324 (52.47%), Query Frame = 1


Query: 232 GKEEGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLA 291
           G E+     ++GG +  L  L+  +I P  +P     LG++   G+LL+GPPG GKT L 
Sbjct: 14  GNEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLV 73

Query: 292 HAIANETGVPFYKISATEVVSGVSGASEENIRELF----SKAYRTTPSIVFIDEIDAIAS 351
            A+  E       +S   V    +G SE+ +RE F    S A    PS++FIDEID +  
Sbjct: 74  RAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCP 133

Query: 352 KRENLQREMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVD 411
           +R+  +RE + RI +QL T MD           S+K  +S  R   V+V+ +TNR DA+D
Sbjct: 134 RRD-ARREQDVRIASQLFTLMD-----------SNKPSSSAPR---VVVVASTNRVDAID 193

Query: 412 PALRRPGRFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTAL 471
           PALRR GRFD  + +  P+E  R +IL + T  + L+ S DL  IA +  G+VGADL AL
Sbjct: 194 PALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEAL 253

Query: 472 ANKA--GTYRRLVEAALEAIQ-------MVQPSLRREGFSAIPSVKWEDVGGLEQLRAEF 531
             +A     +R  ++ +   Q       +V PS+ R     IP V W+DVGGL+ L+ + 
Sbjct: 254 CREATISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKL 313

Query: 532 DRYVVRRVKYPEDYEVDALTTKRG 543
            + V   +K+   +    ++  RG
Sbjct: 314 QQAVEWPIKHSAAFVKMGISPMRG 322

[Close]

BLAST of Lsi01G020050 vs. NCBI nr
Match: gi|659093235|ref|XP_008447437.1| (PREDICTED: cell division control protein 48 homolog C-like isoform X2 [Cucumis melo])

HSP 1 Score: 973.0 bits (2514), Expect = 2.7e-280
Identity = 562/787 (71.41%), Postives = 592/787 (75.22%), Query Frame = 1


Query: 1   MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLD 60
           MAGG+SPSVVNRG LLQRIKSCRHKC TVDDIVDHLQSTYRDYR LKK PFTSIVQQTL+
Sbjct: 1   MAGGKSPSVVNRGLLLQRIKSCRHKCSTVDDIVDHLQSTYRDYRALKKLPFTSIVQQTLN 60

Query: 61  SHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLR 120
                 PKS PSS  P+KIKRQLQDS++EDADCSTIGKKR KR D+GEQRLQ+ ENMHL+
Sbjct: 61  K----TPKSIPSS--PNKIKRQLQDSKNEDADCSTIGKKRAKRGDLGEQRLQNTENMHLK 120

Query: 121 RIKHRNQDDSSSS--SSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMKSMLRTSYAESKK 180
           RI+H NQD SSSS  SSSD  NSGDGAVSTSEDAIYGEKVEP+FDLMKSMLRTSYAESKK
Sbjct: 121 RIQHNNQDGSSSSLSSSSDFGNSGDGAVSTSEDAIYGEKVEPKFDLMKSMLRTSYAESKK 180

Query: 181 LKNEHLEKSMELEVALDNKVAEKIDVGNEG-IGKGIMRKEKQGSLNRAYMETGEGKE-EG 240
           LKNEHLEKSMELEVA+D+KVAEKI +GNEG   K I+RKEKQ SLN        G+E EG
Sbjct: 181 LKNEHLEKSMELEVAIDDKVAEKIIMGNEGNANKEILRKEKQSSLN--------GEEIEG 240

Query: 241 PWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIAN 300
           PWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIAN
Sbjct: 241 PWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIAN 300

Query: 301 ETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREM 360
           ET VPFYKISATE+VSGVSGASEENIRELFSKAYRT PSIVFIDEIDAIASKRENLQREM
Sbjct: 301 ETRVPFYKISATEIVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREM 360

Query: 361 ERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRP--- 420
           ERRIVTQLMTCMDGFHKLVDS DASSKNDNS+VRPGYVLVIGATNRPDAVDPALRRP   
Sbjct: 361 ERRIVTQLMTCMDGFHKLVDSKDASSKNDNSDVRPGYVLVIGATNRPDAVDPALRRPGRF 420

Query: 421 ------GRFD---REIVLGVPDENARAE---------------------ILSVLTSNLRL 480
                 G  D   R  +L V   N R E                      L+    NL +
Sbjct: 421 DREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATAGFVGADLTALANKAGNLAM 480

Query: 481 EGSFDLLKIARATPGFVGADLTALANKAGTYRRLVEAAL------EAIQMVQPSLRREGF 540
           +   D  K   +T       +     +      + + A+      EAIQMVQPSLRREGF
Sbjct: 481 KRIIDQRKCELSTDFADNEHIEDWWRQPWLPEEMEKLAITMTDFEEAIQMVQPSLRREGF 540

Query: 541 SAIPSVKWEDVGGLEQLRAEFDRYVVRRVKYPEDYE---VD---------------ALTT 600
           SAIPSVKWEDVGGLEQLRAEFDRYVVRRVKYPEDYE   VD                L  
Sbjct: 541 SAIPSVKWEDVGGLEQLRAEFDRYVVRRVKYPEDYEGFGVDLETGFLLYGPPGCGKTLIA 600

Query: 601 KR---------------------GKEGGWVVERLLNQLLIELDGAEQRRGVFVIGATNRP 660
           K                      GKEGGWVVERLLNQLLIELDGAEQRRGVFVIGATNRP
Sbjct: 601 KAVANEAGANFIHIKVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRRGVFVIGATNRP 660

Query: 661 EVMDPAVLRPGRFGKLLYVPLPGPTERGLVLKALGRKKPID------------------- 681
           EV+DPA+LRPGRFGKLLYVPLP PTERGLVLKALGRKKPID                   
Sbjct: 661 EVIDPAILRPGRFGKLLYVPLPNPTERGLVLKALGRKKPIDVSVDLLAIGQMEACENFSG 720

[Close]

BLAST of Lsi01G020050 vs. NCBI nr
Match: gi|449457301|ref|XP_004146387.1| (PREDICTED: cell division control protein 48 homolog C [Cucumis sativus])

HSP 1 Score: 897.5 bits (2318), Expect = 1.4e-257
Identity = 480/577 (83.19%), Postives = 500/577 (86.66%), Query Frame = 1


Query: 1   MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLD 60
           MAGG+SPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYR LKKSPFTSIVQQTLD
Sbjct: 1   MAGGKSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRTLKKSPFTSIVQQTLD 60

Query: 61  SHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLR 120
           SHL   PKS PSSSTP KIKR+LQDS+ EDADCSTIGKKR KRVDVGEQRLQ+MENMHLR
Sbjct: 61  SHLNKTPKSIPSSSTPTKIKRRLQDSKTEDADCSTIGKKRPKRVDVGEQRLQNMENMHLR 120

Query: 121 RIKHRNQDDSSSS----SSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMKSMLRTSYAES 180
           RI+H NQDDSSSS    SS+ S NSGDGAVSTSEDAIYGEKVEPEFDLMK MLRTSYAES
Sbjct: 121 RIQHNNQDDSSSSLSSSSSTGSGNSGDGAVSTSEDAIYGEKVEPEFDLMKLMLRTSYAES 180

Query: 181 KKLKNEHLEKSMELEVALDNKVAEKIDVGNEG-IGKGIMRKEKQGSLNRAYMETGEGKEE 240
           KKLKNEHLEKSMELEVA+D+KVAEKI+VGNEG   K I RKEKQ SLNR  +E       
Sbjct: 181 KKLKNEHLEKSMELEVAIDDKVAEKINVGNEGNANKEISRKEKQSSLNREEIE------- 240

Query: 241 GPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIA 300
           GPWFKDLGGMKSVLDELKMEVIVPLYHPQ+PLWLGVRPMAGILLHGPPGCGKTKLAHAIA
Sbjct: 241 GPWFKDLGGMKSVLDELKMEVIVPLYHPQVPLWLGVRPMAGILLHGPPGCGKTKLAHAIA 300

Query: 301 NETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQRE 360
           NETGVPFYKISATE++SGVSGASEENIRELFSKAYRT PSIVFIDEIDAIASKRENLQRE
Sbjct: 301 NETGVPFYKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQRE 360

Query: 361 MERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGR 420
           ME+RIVTQLMTCMDGFHKLVDS DASSK+DNSNVRPGYVLVIGATNRPDAVDPALRRPGR
Sbjct: 361 MEKRIVTQLMTCMDGFHKLVDSKDASSKDDNSNVRPGYVLVIGATNRPDAVDPALRRPGR 420

Query: 421 FDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG--T 480
           FDREIVLGVPDENARAEIL+VLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG   
Sbjct: 421 FDREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGNLA 480

Query: 481 YRRLVEAAL-------------------------------------EAIQMVQPSLRREG 534
            +R+++                                        EAIQMVQPSLRREG
Sbjct: 481 MKRIIDQRKCELSTDCAANEHIEDWWRQPWLPEEMEKLAITMIDFEEAIQMVQPSLRREG 540

[Close]

BLAST of Lsi01G020050 vs. NCBI nr
Match: gi|659116140|ref|XP_008457924.1| (PREDICTED: cell division control protein 48 homolog C-like isoform X2 [Cucumis melo])

HSP 1 Score: 813.1 bits (2099), Expect = 3.6e-232
Identity = 427/478 (89.33%), Postives = 447/478 (93.51%), Query Frame = 1


Query: 1   MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLD 60
           MAGG+SPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYR LKKSPFTSIVQ+TLD
Sbjct: 1   MAGGKSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRTLKKSPFTSIVQKTLD 60

Query: 61  SHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLR 120
           SHL   PKS PSSSTP+KIKR+LQDS+ EDA+CSTIGKKR KRVDVGEQRLQ+MENMHLR
Sbjct: 61  SHLNKTPKSVPSSSTPNKIKRRLQDSKTEDANCSTIGKKRPKRVDVGEQRLQNMENMHLR 120

Query: 121 RIKHRNQDDSSSS----SSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMKSMLRTSYAES 180
           RI+H NQDDSSSS    SS+DS NSGDGAVSTSEDAIYGE+VEPE+DLMK MLRTSYAES
Sbjct: 121 RIQHNNQDDSSSSLSSSSSTDSGNSGDGAVSTSEDAIYGEEVEPEYDLMKLMLRTSYAES 180

Query: 181 KKLKNEHLEKSMELEVALDNKVAEKIDVGNEG-IGKGIMRKEKQGSLNRAYMETGEGKE- 240
           KKLKNEHLEKSMELEVA+D+KVAEKI+VGNEG   K I+RKEKQ SLN        G+E 
Sbjct: 181 KKLKNEHLEKSMELEVAIDDKVAEKINVGNEGNANKEILRKEKQSSLN--------GEEI 240

Query: 241 EGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAI 300
           EGPWFKDLGGMKSVLDELKMEVIVPLYHPQ+PLWLGVRPMAGILLHGPPGCGKTKLAHAI
Sbjct: 241 EGPWFKDLGGMKSVLDELKMEVIVPLYHPQVPLWLGVRPMAGILLHGPPGCGKTKLAHAI 300

Query: 301 ANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQR 360
           ANETGVPFYKISATE++SGVSGASEENIRELFSKAYRT PSIVFIDEIDAIASKRENLQR
Sbjct: 301 ANETGVPFYKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQR 360

Query: 361 EMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPG 420
           EMERRIVTQLMTCMDGFHKLVDS D SSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPG
Sbjct: 361 EMERRIVTQLMTCMDGFHKLVDSKDTSSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPG 420

Query: 421 RFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 473
           RFDREIVLGVPDENARAEIL+VLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG
Sbjct: 421 RFDREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 470

[Close]

BLAST of Lsi01G020050 vs. NCBI nr
Match: gi|659116138|ref|XP_008457923.1| (PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Cucumis melo])

HSP 1 Score: 813.1 bits (2099), Expect = 3.6e-232
Identity = 427/478 (89.33%), Postives = 447/478 (93.51%), Query Frame = 1


Query: 1   MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLD 60
           MAGG+SPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYR LKKSPFTSIVQ+TLD
Sbjct: 1   MAGGKSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRTLKKSPFTSIVQKTLD 60

Query: 61  SHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLR 120
           SHL   PKS PSSSTP+KIKR+LQDS+ EDA+CSTIGKKR KRVDVGEQRLQ+MENMHLR
Sbjct: 61  SHLNKTPKSVPSSSTPNKIKRRLQDSKTEDANCSTIGKKRPKRVDVGEQRLQNMENMHLR 120

Query: 121 RIKHRNQDDSSSS----SSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMKSMLRTSYAES 180
           RI+H NQDDSSSS    SS+DS NSGDGAVSTSEDAIYGE+VEPE+DLMK MLRTSYAES
Sbjct: 121 RIQHNNQDDSSSSLSSSSSTDSGNSGDGAVSTSEDAIYGEEVEPEYDLMKLMLRTSYAES 180

Query: 181 KKLKNEHLEKSMELEVALDNKVAEKIDVGNEG-IGKGIMRKEKQGSLNRAYMETGEGKE- 240
           KKLKNEHLEKSMELEVA+D+KVAEKI+VGNEG   K I+RKEKQ SLN        G+E 
Sbjct: 181 KKLKNEHLEKSMELEVAIDDKVAEKINVGNEGNANKEILRKEKQSSLN--------GEEI 240

Query: 241 EGPWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAI 300
           EGPWFKDLGGMKSVLDELKMEVIVPLYHPQ+PLWLGVRPMAGILLHGPPGCGKTKLAHAI
Sbjct: 241 EGPWFKDLGGMKSVLDELKMEVIVPLYHPQVPLWLGVRPMAGILLHGPPGCGKTKLAHAI 300

Query: 301 ANETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQR 360
           ANETGVPFYKISATE++SGVSGASEENIRELFSKAYRT PSIVFIDEIDAIASKRENLQR
Sbjct: 301 ANETGVPFYKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQR 360

Query: 361 EMERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPG 420
           EMERRIVTQLMTCMDGFHKLVDS D SSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPG
Sbjct: 361 EMERRIVTQLMTCMDGFHKLVDSKDTSSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPG 420

Query: 421 RFDREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 473
           RFDREIVLGVPDENARAEIL+VLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG
Sbjct: 421 RFDREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 470

[Close]

BLAST of Lsi01G020050 vs. NCBI nr
Match: gi|659093233|ref|XP_008447436.1| (PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Cucumis melo])

HSP 1 Score: 776.5 bits (2004), Expect = 3.7e-221
Identity = 417/476 (87.61%), Postives = 435/476 (91.39%), Query Frame = 1


Query: 1   MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLD 60
           MAGG+SPSVVNRG LLQRIKSCRHKC TVDDIVDHLQSTYRDYR LKK PFTSIVQQTL+
Sbjct: 1   MAGGKSPSVVNRGLLLQRIKSCRHKCSTVDDIVDHLQSTYRDYRALKKLPFTSIVQQTLN 60

Query: 61  SHLKNNPKSTPSSSTPHKIKRQLQDSEDEDADCSTIGKKRLKRVDVGEQRLQSMENMHLR 120
                 PKS PSS  P+KIKRQLQDS++EDADCSTIGKKR KR D+GEQRLQ+ ENMHL+
Sbjct: 61  K----TPKSIPSS--PNKIKRQLQDSKNEDADCSTIGKKRAKRGDLGEQRLQNTENMHLK 120

Query: 121 RIKHRNQDDSSSS--SSSDSANSGDGAVSTSEDAIYGEKVEPEFDLMKSMLRTSYAESKK 180
           RI+H NQD SSSS  SSSD  NSGDGAVSTSEDAIYGEKVEP+FDLMKSMLRTSYAESKK
Sbjct: 121 RIQHNNQDGSSSSLSSSSDFGNSGDGAVSTSEDAIYGEKVEPKFDLMKSMLRTSYAESKK 180

Query: 181 LKNEHLEKSMELEVALDNKVAEKIDVGNEG-IGKGIMRKEKQGSLNRAYMETGEGKE-EG 240
           LKNEHLEKSMELEVA+D+KVAEKI +GNEG   K I+RKEKQ SLN        G+E EG
Sbjct: 181 LKNEHLEKSMELEVAIDDKVAEKIIMGNEGNANKEILRKEKQSSLN--------GEEIEG 240

Query: 241 PWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIAN 300
           PWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIAN
Sbjct: 241 PWFKDLGGMKSVLDELKMEVIVPLYHPQLPLWLGVRPMAGILLHGPPGCGKTKLAHAIAN 300

Query: 301 ETGVPFYKISATEVVSGVSGASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENLQREM 360
           ET VPFYKISATE+VSGVSGASEENIRELFSKAYRT PSIVFIDEIDAIASKRENLQREM
Sbjct: 301 ETRVPFYKISATEIVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREM 360

Query: 361 ERRIVTQLMTCMDGFHKLVDSNDASSKNDNSNVRPGYVLVIGATNRPDAVDPALRRPGRF 420
           ERRIVTQLMTCMDGFHKLVDS DASSKNDNS+VRPGYVLVIGATNRPDAVDPALRRPGRF
Sbjct: 361 ERRIVTQLMTCMDGFHKLVDSKDASSKNDNSDVRPGYVLVIGATNRPDAVDPALRRPGRF 420

Query: 421 DREIVLGVPDENARAEILSVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAG 473
           DREIVLGVPDENARAEIL+VLTSNLRLEGSFDLLKIARAT GFVGADLTALANKAG
Sbjct: 421 DREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATAGFVGADLTALANKAG 462

The following BLAST results are available for this feature:

BLAST of Lsi01G020050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CD48C_ARATH	7.7e-110	50.81	Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=...	[more]
Y1297_ARCFU	4.4e-65	42.68	Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus (strain...	[more]
YB7A_SCHPO	4.4e-65	48.91	Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces p...	[more]
Y1156_METJA	1.3e-64	42.48	Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii (...	[more]
CDC48_SOYBN	1.7e-64	41.77	Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1	[more]

BLAST of Lsi01G020050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3U4_CUCSA	1.0e-257	83.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G506870 PE=4 SV=1	[more]
A0A061F3G0_THECC	2.8e-159	58.16	Cell division control protein 48 C isoform 1 OS=Theobroma cacao GN=TCM_030531 PE...	[more]
A0A0D2VFN0_GOSRA	1.5e-157	57.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G148700 PE=4 SV=1	[more]
A0A0D2SEH5_GOSRA	1.5e-157	57.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G148700 PE=4 SV=1	[more]
A0A0D2U1N8_GOSRA	1.5e-157	57.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G148700 PE=4 SV=1	[more]

BLAST of Lsi01G020050 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01610.1	4.3e-111	50.81	cell division cycle 48C	[more]
AT5G03340.1	1.0e-64	40.61	ATPase, AAA-type, CDC48 protein	[more]
AT3G53230.1	1.4e-64	40.30	ATPase, AAA-type, CDC48 protein	[more]
AT3G09840.1	4.0e-64	40.30	cell division cycle 48	[more]
AT2G03670.1	1.2e-41	35.19	cell division cycle 48B	[more]

BLAST of Lsi01G020050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093235\|ref\|XP_008447437.1\|	2.7e-280	71.41	PREDICTED: cell division control protein 48 homolog C-like isoform X2 [Cucumis m...	[more]
gi\|449457301\|ref\|XP_004146387.1\|	1.4e-257	83.19	PREDICTED: cell division control protein 48 homolog C [Cucumis sativus]	[more]
gi\|659116140\|ref\|XP_008457924.1\|	3.6e-232	89.33	PREDICTED: cell division control protein 48 homolog C-like isoform X2 [Cucumis m...	[more]
gi\|659116138\|ref\|XP_008457923.1\|	3.6e-232	89.33	PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Cucumis m...	[more]
gi\|659093233\|ref\|XP_008447436.1\|	3.7e-221	87.61	PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Cucumis m...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003960	ATPase_AAA_CS
IPR003959	ATPase_AAA_core
IPR003593	AAA+_ATPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0030422	production of siRNA involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0043687	post-translational protein modification
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0016571	histone methylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0070646	protein modification by small protein removal
biological_process	GO:0070918	production of small RNA involved in gene silencing by RNA
biological_process	GO:0035194	posttranscriptional gene silencing by RNA
biological_process	GO:0051301	cell division
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G020050.1	Lsi01G020050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 273..426 score: 5.7
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 277..422 score: 6.2E-41coord: 533..598 score: 3.8
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 569..587 score: -coord: 394..412 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 533..668 score: 6.2E-22coord: 239..515 score: 9.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 501..676 score: 6.72E-18coord: 239..475 score: 2.81
None	No IPR available	PANTHER	PTHR23077	AAA-FAMILY ATPASE	coord: 234..371 score: 1.5E-177coord: 387..678 score: 1.5E-177coord: 111..131 score: 1.5E
None	No IPR available	PANTHER	PTHR23077:SF55	NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE	coord: 234..371 score: 1.5E-177coord: 387..678 score: 1.5E-177coord: 111..131 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G020050	Csa4G506870	Cucumber (Chinese Long) v2	culsiB250
Lsi01G020050	CSPI04G20300	Wild cucumber (PI 183967)	cpilsiB263
Lsi01G020050	CmaCh07G012490	Cucurbita maxima (Rimu)	cmalsiB792
Lsi01G020050	CmoCh07G012940	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G020050	CmoCh03G000330	Cucurbita moschata (Rifu)	cmolsiB589
Lsi01G020050	Cla011695	Watermelon (97103) v1	lsiwmB146
Lsi01G020050	ClCG04G002360	Watermelon (Charleston Gray)	lsiwcgB135
Lsi01G020050	Cla97C04G069930	Watermelon (97103) v2	lsiwmbB133
Lsi01G020050	Cp4.1LG19g01330	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G020050	CsGy4G018910	Cucumber (Gy14) v2	cgyblsiB243
Lsi01G020050	Carg12682	Silver-seed gourd	carlsiB259
Lsi01G020050	CsaV3_4G030490	Cucumber (Chinese Long) v3	cuclsiB279

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G020050	Wax gourd	lsiwgoB173
Lsi01G020050	Cucurbita pepo (Zucchini)	cpelsiB399
Lsi01G020050	Silver-seed gourd	carlsiB430
Lsi01G020050	Watermelon (97103) v2	lsiwmbB136