Lsi01G019990 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G019990
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Myb family transcription factor family protein
Location	chr01 : 26783102 .. 26784631 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGATTCTTCATTCTTCAATCCCATTCCCTTTTTCCTCGAATAATCTGTCTTCCAATTCGCTGTTATTAATCCTATCTTTCGCATCAAGTCTTCCAAGAATAATCACAAAGGAATTATATGCTATGCGTTGATGTTATTTATGTTCTTTCTCTGTTTCTCCCTTTTTTTCTCTCTCTCTCAATTCCATCCAAAAATCTTCCATACTCTGTCTTCAAACGAAGATTTGGGGTTTGTTTCTTTCGAAATTCTGTAAATGAACGGTTACGGAATTGATTCGAAGCAAGAAATTCAACAAAATCATGGACTGATTACTGATTGTTACTCTCAAAATTTTAGGGCGCAGCAGCCCTGGAGGATGGGGACTTGTGTTCATCTATCTGCCATGGATGAAGTTGAATCCTCAGAACAGCTAAATTTATGTCCGTCTAAATCCAGTTCCACTATCATCAATCTCTTCGAATCGCCTACTTCGGCTTTCTTCGCAACGGAGCAATGTATGGGGATTCCACCGATTCAATTTCAGTCTGGTTCTTCGTCTTTCGATATGGCTTCCGATTCGCTTTCCACGATTTTTCAATCCTCGGGGGAGAATTTCTCTCTCGATTCGGCGGAGCATAGTGGTGTAGACTCTGAATTCAGTAACACCTTGCAATCGGTTGTGAAATCTCAACTCTGTAAGAGAAGCTTCAATGGCTTCCCGAAGACTAGTTTCGCCGAGCACAAGGTGTTTGATGAAAGTTCCCCTACAATCAAGAAGCATTATTCAGTTCCTTTCAAAGACCAAGTAGTACGTAATTCCCACTCTCCATTTAACCATCTAATTTCCTTCTCTCTTTTCCAACATTTATGAATGTTTGATTCCGATTCAGGTGTGTTATAATTCAATTGCACAGCCAAGTTTTTGTTCGAACTCTCCTAGATTCTCTGGCTTGAGTGCTTCTGTTGGCTCTGGAAGCTCTTCATCTTCCTTCAATGGGAATGGATTCACCACCAAAACAAGAATCAGATGGACACAAGATCTCCATGAGAAATTTGTTGACTGTGTTAATCGTCTTGGTGGTGCTGAGAGTAAGTAAGATCAAAACTGATTAATGGGGGTTTTGAGTTCTTGAATTTTCGGAGCTGATTTGTTGTTAATGTCACAGAGGCAACGCCTAAAGCAATCTTGAAGCTGATGGATTCAGAGGGATTGACCATATTCCATGTGAAGAGTCATTTGCAGGTACATAAAAAGAAAGAAAGAACTGTATAATATTGTATAATTTGAATCTGTTTTCTGTCACATAATTACTGATTTTAGTGTTTATCTTTCTTTTTGTAGAAATATCGGATAGCAAAATACATGCCAGAATCTGCAGAAAGTAGAGATTTCCATACTGAAAAAACCATTTATTTCAATTCCATACTCTGTTTTATTTGCTTCAAGCTTTGAATATATCTTGGACTTTTCAACAATGGATTCTTTCTTACAACTCCAATTTTGTGTTCTTCAAATACATGTCCAGATCATCTAGCCAGTTTTTCAATT

mRNA sequence

ATTGATTCTTCATTCTTCAATCCCATTCCCTTTTTCCTCGAATAATCTGTCTTCCAATTCGCTGTTATTAATCCTATCTTTCGCATCAAGTCTTCCAAGAATAATCACAAAGGAATTATATGCTATGCGTTGATGTTATTTATGTTCTTTCTCTGTTTCTCCCTTTTTTTCTCTCTCTCTCAATTCCATCCAAAAATCTTCCATACTCTGTCTTCAAACGAAGATTTGGGGTTTGTTTCTTTCGAAATTCTGTAAATGAACGGTTACGGAATTGATTCGAAGCAAGAAATTCAACAAAATCATGGACTGATTACTGATTGTTACTCTCAAAATTTTAGGGCGCAGCAGCCCTGGAGGATGGGGACTTGTGTTCATCTATCTGCCATGGATGAAGTTGAATCCTCAGAACAGCTAAATTTATGTCCGTCTAAATCCAGTTCCACTATCATCAATCTCTTCGAATCGCCTACTTCGGCTTTCTTCGCAACGGAGCAATGTATGGGGATTCCACCGATTCAATTTCAGTCTGGTTCTTCGTCTTTCGATATGGCTTCCGATTCGCTTTCCACGATTTTTCAATCCTCGGGGGAGAATTTCTCTCTCGATTCGGCGGAGCATAGTGGTGTAGACTCTGAATTCAGTAACACCTTGCAATCGGTTGTGAAATCTCAACTCTGTAAGAGAAGCTTCAATGGCTTCCCGAAGACTAGTTTCGCCGAGCACAAGGTGTTTGATGAAAGTTCCCCTACAATCAAGAAGCATTATTCAGTTCCTTTCAAAGACCAAGTAGTGTGTTATAATTCAATTGCACAGCCAAGTTTTTGTTCGAACTCTCCTAGATTCTCTGGCTTGAGTGCTTCTGTTGGCTCTGGAAGCTCTTCATCTTCCTTCAATGGGAATGGATTCACCACCAAAACAAGAATCAGATGGACACAAGATCTCCATGAGAAATTTGTTGACTGTGTTAATCGTCTTGGTGGTGCTGAGAAGGCAACGCCTAAAGCAATCTTGAAGCTGATGGATTCAGAGGGATTGACCATATTCCATGTGAAGAGTCATTTGCAGAAATATCGGATAGCAAAATACATGCCAGAATCTGCAGAAAGTAGAGATTTCCATACTGAAAAAACCATTTATTTCAATTCCATACTCTGTTTTATTTGCTTCAAGCTTTGAATATATCTTGGACTTTTCAACAATGGATTCTTTCTTACAACTCCAATTTTGTGTTCTTCAAATACATGTCCAGATCATCTAGCCAGTTTTTCAATT

Coding sequence (CDS)

ATGAACGGTTACGGAATTGATTCGAAGCAAGAAATTCAACAAAATCATGGACTGATTACTGATTGTTACTCTCAAAATTTTAGGGCGCAGCAGCCCTGGAGGATGGGGACTTGTGTTCATCTATCTGCCATGGATGAAGTTGAATCCTCAGAACAGCTAAATTTATGTCCGTCTAAATCCAGTTCCACTATCATCAATCTCTTCGAATCGCCTACTTCGGCTTTCTTCGCAACGGAGCAATGTATGGGGATTCCACCGATTCAATTTCAGTCTGGTTCTTCGTCTTTCGATATGGCTTCCGATTCGCTTTCCACGATTTTTCAATCCTCGGGGGAGAATTTCTCTCTCGATTCGGCGGAGCATAGTGGTGTAGACTCTGAATTCAGTAACACCTTGCAATCGGTTGTGAAATCTCAACTCTGTAAGAGAAGCTTCAATGGCTTCCCGAAGACTAGTTTCGCCGAGCACAAGGTGTTTGATGAAAGTTCCCCTACAATCAAGAAGCATTATTCAGTTCCTTTCAAAGACCAAGTAGTGTGTTATAATTCAATTGCACAGCCAAGTTTTTGTTCGAACTCTCCTAGATTCTCTGGCTTGAGTGCTTCTGTTGGCTCTGGAAGCTCTTCATCTTCCTTCAATGGGAATGGATTCACCACCAAAACAAGAATCAGATGGACACAAGATCTCCATGAGAAATTTGTTGACTGTGTTAATCGTCTTGGTGGTGCTGAGAAGGCAACGCCTAAAGCAATCTTGAAGCTGATGGATTCAGAGGGATTGACCATATTCCATGTGAAGAGTCATTTGCAGAAATATCGGATAGCAAAATACATGCCAGAATCTGCAGAAAGTAGAGATTTCCATACTGAAAAAACCATTTATTTCAATTCCATACTCTGTTTTATTTGCTTCAAGCTTTGA

Protein sequence

MNGYGIDSKQEIQQNHGLITDCYSQNFRAQQPWRMGTCVHLSAMDEVESSEQLNLCPSKSSSTIINLFESPTSAFFATEQCMGIPPIQFQSGSSSFDMASDSLSTIFQSSGENFSLDSAEHSGVDSEFSNTLQSVVKSQLCKRSFNGFPKTSFAEHKVFDESSPTIKKHYSVPFKDQVVCYNSIAQPSFCSNSPRFSGLSASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAESRDFHTEKTIYFNSILCFICFKL

Homology

[Close]

BLAST of Lsi01G019990 vs. Swiss-Prot
Match: PHL5_ARATH (Myb family transcription factor PHL5 OS=Arabidopsis thaliana GN=PHL5 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 92/231 (39.83%), Postives = 122/231 (52.81%), Query Frame = 1


Query: 68  FESPTSAFFATEQCMGIPPIQFQSGSSSFDMASDSLSTIFQSSGENFSLDSAEHSGVDSE 127
           +  P+S +  TE   G+ P    + + SF +   S S  + SS   +   S++   +D  
Sbjct: 38  YNQPSSPW-TTETFSGLTPYDC-TANQSFPVQCSS-SKPYPSSFHPYHHQSSDSPSLDQS 97

Query: 128 FSNTLQSVVKSQLCKRSFNGFPKTSFAEHKVFDESSPTIKKHYSVPFKDQVVCY-----N 187
            S      +  Q  K  +       FA     + SS +    +      Q +C      +
Sbjct: 98  VSMIPMQPLPDQYMKPLYQRSCSNDFA---ATNASSASYSLSFEASHDPQELCRRTYSNS 157

Query: 188 SIAQPSFCSNS-------PRFSGL-SASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFV 247
           ++   +F S+        PRFS   S S+  GS + +        KTRIRWTQDLHEKFV
Sbjct: 158 NVTHLNFTSSQHQPKQSHPRFSSPPSFSIHGGSMAPNC-----VNKTRIRWTQDLHEKFV 217

Query: 248 DCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAESR 286
           +CVNRLGGA+KATPKAILK MDS+GLTIFHVKSHLQKYRIAKYMPES E +
Sbjct: 218 ECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYMPESQEGK 257

[Close]

BLAST of Lsi01G019990 vs. Swiss-Prot
Match: PHR3_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica GN=PHR3 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 207 SSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVK 266
           SSS S +G     K R+RWT +LHE+FVD VN+L G EKATPK +LKLM  EGLTI+H+K
Sbjct: 252 SSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIK 311

Query: 267 SHLQKYRIAKYMPESAESRDFHTEKT 293
           SHLQKYR+AKY+PE+ E +    +KT
Sbjct: 312 SHLQKYRLAKYLPETKEDKKQEEKKT 337

[Close]

BLAST of Lsi01G019990 vs. Swiss-Prot
Match: PHR3_ORYSI (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica GN=PHR3 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 207 SSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVK 266
           SSS S +G     K R+RWT +LHE+FVD VN+L G EKATPK +LKLM  EGLTI+H+K
Sbjct: 252 SSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIK 311

Query: 267 SHLQKYRIAKYMPESAESRDFHTEKT 293
           SHLQKYR+AKY+PE+ E +    +KT
Sbjct: 312 SHLQKYRLAKYLPETKEDKKQEEKKT 337

[Close]

BLAST of Lsi01G019990 vs. Swiss-Prot
Match: PHR2_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. japonica GN=PHR2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 1


Query: 175 KDQVVCYNSIAQPSFCSNSPRFSGLSASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFV 234
           +  V  + S AQ S  S S   S ++    SG+S++S       +KTR+RWT +LHE+FV
Sbjct: 207 QSSVAVHQSAAQQSVSSQSGEPSAVAIPSPSGASNTS------NSKTRMRWTPELHERFV 266

Query: 235 DCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAE 284
           D VN LGG+EKATPK +LKLM ++ LTI+HVKSHLQKYR A+Y PE +E
Sbjct: 267 DAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRTARYRPELSE 309

[Close]

BLAST of Lsi01G019990 vs. Swiss-Prot
Match: PHR2_ORYSI (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica GN=PHR2 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 1


Query: 175 KDQVVCYNSIAQPSFCSNSPRFSGLSASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFV 234
           +  V  + S AQ S  S S   S ++    SG+S++S       +KTR+RWT +LHE+FV
Sbjct: 207 QSSVAVHQSAAQQSVSSQSGEPSAVAIPSPSGASNTS------NSKTRMRWTPELHERFV 266

Query: 235 DCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAE 284
           D VN LGG+EKATPK +LKLM ++ LTI+HVKSHLQKYR A+Y PE +E
Sbjct: 267 DAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRTARYRPELSE 309

[Close]

BLAST of Lsi01G019990 vs. TrEMBL
Match: A0A0A0L162_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499310 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.3e-135
Identity = 252/285 (88.42%), Postives = 258/285 (90.53%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDCYSQNFRAQQPWRMGTCVHLSAMDEVESSEQLNLCPSKS 60
           MN YGIDSKQEIQQNHGLITD YSQNFRA+QP RMG C HLSAMDEVESS+ LN CPSK 
Sbjct: 1   MNAYGIDSKQEIQQNHGLITDYYSQNFRAEQPRRMGACAHLSAMDEVESSQHLNSCPSKP 60

Query: 61  SSTIINLFESPTSAFFATEQCMGIPPIQFQSGSSSFDMASDSLSTIFQSSGENFSLDSAE 120
           SSTIINLFESP SAFFATEQCMGIPPIQFQSGSSSF    +SLSTIFQSS ENFSLDSAE
Sbjct: 61  SSTIINLFESPASAFFATEQCMGIPPIQFQSGSSSF----NSLSTIFQSSAENFSLDSAE 120

Query: 121 HSGVDSEFSNTLQSVVKSQLCKRSFNGFPKTSFAEHKVFDESSPTIKKHYSVPFKDQVVC 180
            SGVDSEFSNTLQSVVKSQLCKRSFNG PK SF EHKVFD SS TIKKHYSVPFKDQ+ C
Sbjct: 121 QSGVDSEFSNTLQSVVKSQLCKRSFNGLPKGSFVEHKVFDGSSDTIKKHYSVPFKDQIGC 180

Query: 181 YNSIAQPSFCSNSPRFSGLSASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRL 240
           YNSIAQPSFCS SPRFS L  S+G GSSSSSF+GNGFTTKTRIRWTQDLHEKFVDCVNRL
Sbjct: 181 YNSIAQPSFCSTSPRFSCLGGSIGPGSSSSSFSGNGFTTKTRIRWTQDLHEKFVDCVNRL 240

Query: 241 GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAESR 286
           GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAE R
Sbjct: 241 GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAERR 281

[Close]

BLAST of Lsi01G019990 vs. TrEMBL
Match: A0A061F4K8_THECC (Myb-like HTH transcriptional regulator family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_024886 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.3e-52
Identity = 142/318 (44.65%), Postives = 189/318 (59.43%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDC---YSQNFRAQQPWRMGTCVHLSAMDEVESSEQLNLCP 60
           MN   ID ++ ++QN G  + C   Y  +   QQPW MG  +   AM+E   S+Q N   
Sbjct: 1   MNSRKIDCQEHLEQNLGFSSVCNFEYVNHDGFQQPWNMGIRIQAPAMEE--GSQQENPGA 60

Query: 61  SKSSSTIINLFESPTSAFFATEQCMGIPPIQFQSGSSSF----DMASDSLSTIFQSSGEN 120
           +K+S+TI++ F SP SAF+ATE+CMG      Q   SS+    + + +S    F +SG+N
Sbjct: 61  AKTSNTIMSGFLSPASAFYATERCMGFSEYGCQGDRSSYTSQYNKSCNSHLPSFHASGDN 120

Query: 121 FSLDSAEHSGVDSEFSNTLQSVVKSQLCKRSFNGFPKTSFAEHKV------------FDE 180
           FS++S      + E  NT +S+VKSQ+     N + K+S   +K+             D+
Sbjct: 121 FSIESVAQDETNYELRNTFESLVKSQIY---CNQYQKSSEKSYKIPCCNSQGSQVSPHDQ 180

Query: 181 SS------PTIKKHYSVPFK---DQVVCYNS----IAQPSFCSNSPRFSGLSASVGSGSS 240
           S+       T+  HYSVPF+   DQ    NS    +AQ S      + S  S+   S SS
Sbjct: 181 SNFLGNNAVTVGSHYSVPFRGNQDQRAYCNSYSSPLAQLSIFQQGKQSSNCSSGTFSVSS 240

Query: 241 SSSFN-GNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKS 286
            +S + G    +KTRIRWTQDLH+KFV+CV RLGGAEKATPKAILKLMD+EGLTIFHVKS
Sbjct: 241 GNSVSTGAALASKTRIRWTQDLHDKFVECVKRLGGAEKATPKAILKLMDTEGLTIFHVKS 300

[Close]

BLAST of Lsi01G019990 vs. TrEMBL
Match: A0A061EWJ5_THECC (Myb-like HTH transcriptional regulator family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_024886 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.1e-52
Identity = 142/316 (44.94%), Postives = 188/316 (59.49%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDC---YSQNFRAQQPWRMGTCVHLSAMDEVESSEQLNLCP 60
           MN   ID ++ ++QN G  + C   Y  +   QQPW MG  +   AM+E   S+Q N   
Sbjct: 1   MNSRKIDCQEHLEQNLGFSSVCNFEYVNHDGFQQPWNMGIRIQAPAMEE--GSQQENPGA 60

Query: 61  SKSSSTIINLFESPTSAFFATEQCMGIPPIQFQSGSSSF----DMASDSLSTIFQSSGEN 120
           +K+S+TI++ F SP SAF+ATE+CMG      Q   SS+    + + +S    F +SG+N
Sbjct: 61  AKTSNTIMSGFLSPASAFYATERCMGFSEYGCQGDRSSYTSQYNKSCNSHLPSFHASGDN 120

Query: 121 FSLDSAEHSGVDSEFSNTLQSVVKSQLCKRSFNGFPKTSFAEHKV------------FDE 180
           FS++S      + E  NT +S+VKSQ+     N + K+S   +K+             D+
Sbjct: 121 FSIESVAQDETNYELRNTFESLVKSQIY---CNQYQKSSEKSYKIPCCNSQGSQVSPHDQ 180

Query: 181 SS------PTIKKHYSVPFK---DQVVCYNS----IAQPSFCSNSPRFSGLSASVGSGSS 240
           S+       T+  HYSVPF+   DQ    NS    +AQ S      + S  S+   S SS
Sbjct: 181 SNFLGNNAVTVGSHYSVPFRGNQDQRAYCNSYSSPLAQLSIFQQGKQSSNCSSGTFSVSS 240

Query: 241 SSSFN-GNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKS 284
            +S + G    +KTRIRWTQDLH+KFV+CV RLGGAEKATPKAILKLMD+EGLTIFHVKS
Sbjct: 241 GNSVSTGAALASKTRIRWTQDLHDKFVECVKRLGGAEKATPKAILKLMDTEGLTIFHVKS 300

[Close]

BLAST of Lsi01G019990 vs. TrEMBL
Match: B9SWI3_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0277900 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.7e-50
Identity = 142/328 (43.29%), Postives = 182/328 (55.49%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDCYSQNFRA---QQPWRMGTCVHLSAMDEVESSEQLNLCP 60
           MN   ID +  IQQNHG+I D    +F++   QQ W MG       M+     +Q NL P
Sbjct: 1   MNTSKIDFQGRIQQNHGMIGDLALHSFQSFGNQQTWNMGIRAQSPVMESAHLQQQ-NLRP 60

Query: 61  SKSSSTIINLFESPTSAFFATEQCMGIPPIQFQSG---SSSFDMASDSLSTIFQSSGENF 120
            KSSS+I+  FESP SAF+ATE+ MG P    Q     S  +  + DS     QSSGE +
Sbjct: 61  DKSSSSIMRSFESPASAFYATERYMGFPQYDCQVNAVLSCPYSKSYDSQIPSQQSSGEIY 120

Query: 121 SLDSA-EHSGVDSEFSNTLQSVVKSQLCK----RSFNGFPKTSFA-------EHKVFDES 180
            +D+  +    + E  N LQS+ KS L      +S+ G    S         ++K+    
Sbjct: 121 VIDAVNQQPDHNLELRNNLQSITKSHLSDDHYYKSYKGVCSNSLGNKLHQLEQNKLSRNG 180

Query: 181 SPTIKKHYSVPF--KDQVVCYNSIAQPSFCS---------NSPRFSGLSASVGSGSSSSS 240
           + ++   +S+PF        +N      F            SPRFS    SV S SS +S
Sbjct: 181 AVSVGNQFSIPFYGDQDHNNHNRFGSNPFVQLGVSSRQEMQSPRFSSGVVSVSSASSGNS 240

Query: 241 F-NGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQ 299
              G   ++KTRIRWTQDLHEKFV+CVNRLGGA+KATPKAILKLMDS+GLTIFHVKSHLQ
Sbjct: 241 MATGAVLSSKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSDGLTIFHVKSHLQ 300

[Close]

BLAST of Lsi01G019990 vs. TrEMBL
Match: A0A0L9TU87_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g026500 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48
Identity = 149/319 (46.71%), Postives = 183/319 (57.37%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITD-------CYSQNFRAQQPWRMGTCVHLSAMDEVESSEQL 60
           MN Y ID    IQQ++GL  D       C SQ F   Q   MGTC    AM      E+ 
Sbjct: 1   MNEYRIDCVGRIQQSYGLNGDLSSEFGNCSSQCFDIIQASHMGTCNQPLAMASGGFEEEP 60

Query: 61  NLCPSKSSSTIINLFESPTSAFFATEQCMGIPPIQFQSGS----SSFDMASDSLSTIFQS 120
           ++  +KSSS+II+ FESP SAF+ATE CMG P      G+    S F   SD    ++QS
Sbjct: 61  HIGQTKSSSSIISRFESPASAFYATEICMGFPQYDRLVGNPSLISQFSKISDVEFPLYQS 120

Query: 121 SGENFSLDS-AEHSGVDSEFSNTLQSV----VKSQLCKRS--------FNGFPKTSFA-- 180
             +N  L S A     + E SN LQ++    V S  C RS           FP +SF   
Sbjct: 121 PRQNLFLASLANQPAPNFELSNPLQAMLLSHVNSDQCVRSPEKSNKISSGNFPGSSFLPI 180

Query: 181 -EHKVF--DESSPTIKKHYSVPFKDQVVCYN-SIAQPSFCSN----SPRFSGLSASVGSG 240
            + K+F  D SSP++    +   +D    YN   AQ SF S     SP  S  S    SG
Sbjct: 181 EQPKLFIGDASSPSVPCIGNQDQRDCCGSYNLPAAQISFSSQQEMLSPTLSAGSLLTSSG 240

Query: 241 SSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVK 286
           +SSS  NG   ++KTRIRWTQ+LHEKFV+CVNRLGGAEKATPKAIL+LM+S+GLTIFHVK
Sbjct: 241 NSSS--NGPVVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVK 300

[Close]

BLAST of Lsi01G019990 vs. TAIR10
Match: AT5G06800.1 (AT5G06800.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-28
Identity = 92/231 (39.83%), Postives = 122/231 (52.81%), Query Frame = 1


Query: 68  FESPTSAFFATEQCMGIPPIQFQSGSSSFDMASDSLSTIFQSSGENFSLDSAEHSGVDSE 127
           +  P+S +  TE   G+ P    + + SF +   S S  + SS   +   S++   +D  
Sbjct: 38  YNQPSSPW-TTETFSGLTPYDC-TANQSFPVQCSS-SKPYPSSFHPYHHQSSDSPSLDQS 97

Query: 128 FSNTLQSVVKSQLCKRSFNGFPKTSFAEHKVFDESSPTIKKHYSVPFKDQVVCY-----N 187
            S      +  Q  K  +       FA     + SS +    +      Q +C      +
Sbjct: 98  VSMIPMQPLPDQYMKPLYQRSCSNDFA---ATNASSASYSLSFEASHDPQELCRRTYSNS 157

Query: 188 SIAQPSFCSNS-------PRFSGL-SASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFV 247
           ++   +F S+        PRFS   S S+  GS + +        KTRIRWTQDLHEKFV
Sbjct: 158 NVTHLNFTSSQHQPKQSHPRFSSPPSFSIHGGSMAPNC-----VNKTRIRWTQDLHEKFV 217

Query: 248 DCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAESR 286
           +CVNRLGGA+KATPKAILK MDS+GLTIFHVKSHLQKYRIAKYMPES E +
Sbjct: 218 ECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYMPESQEGK 257

[Close]

BLAST of Lsi01G019990 vs. TAIR10
Match: AT4G28610.1 (AT4G28610.1 phosphate starvation response 1)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-23
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1


Query: 208 SSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKS 267
           S++S N N  T K R+RWT +LHE FV+ VN LGG+E+ATPK +LK+M  EGLTI+HVKS
Sbjct: 213 STTSSNSNNGTGKARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKS 272

Query: 268 HLQKYRIAKYMPESAES 285
           HLQKYR A+Y PE +E+
Sbjct: 273 HLQKYRTARYRPEPSET 289

[Close]

BLAST of Lsi01G019990 vs. TAIR10
Match: AT5G29000.2 (AT5G29000.2 Homeodomain-like superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-22
Identity = 49/79 (62.03%), Postives = 66/79 (83.54%), Query Frame = 1


Query: 205 SGSSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFH 264
           SG +SSS   +  T+K R+RWT +LHE FV+ VN+LGG+E+ATPKA+LKL+++ GLTI+H
Sbjct: 219 SGRNSSS---SVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYH 278

Query: 265 VKSHLQKYRIAKYMPESAE 284
           VKSHLQKYR A+Y PE++E
Sbjct: 279 VKSHLQKYRTARYKPETSE 294

[Close]

BLAST of Lsi01G019990 vs. TAIR10
Match: AT3G04450.1 (AT3G04450.1 Homeodomain-like superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 6.4e-22
Identity = 42/72 (58.33%), Postives = 60/72 (83.33%), Query Frame = 1


Query: 215 NGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI 274
           +  T+K R+RWT +LHE FV+ +N+LGG+E+ATPKA+LKL++S GLT++HVKSHLQKYR 
Sbjct: 233 SSMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKSHLQKYRT 292

Query: 275 AKYMPESAESRD 287
           A+Y PE ++  +
Sbjct: 293 ARYKPELSKDTE 304

[Close]

BLAST of Lsi01G019990 vs. TAIR10
Match: AT3G13040.1 (AT3G13040.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-21
Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 1


Query: 208 SSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKS 267
           SS    G+    K+R+RWT +LHE FV  V +L G EKATPKA+ KLM+ EGLTI+HVKS
Sbjct: 229 SSHPSPGSAANQKSRMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKS 288

Query: 268 HLQKYRIAKYMPESAESR 286
           HLQKYR+AKYMPE  E +
Sbjct: 289 HLQKYRLAKYMPEKKEEK 306

[Close]

BLAST of Lsi01G019990 vs. NCBI nr
Match: gi|659082980|ref|XP_008442127.1| (PREDICTED: uncharacterized protein LOC103486080 isoform X1 [Cucumis melo])

HSP 1 Score: 503.1 bits (1294), Expect = 3.5e-139
Identity = 258/285 (90.53%), Postives = 264/285 (92.63%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDCYSQNFRAQQPWRMGTCVHLSAMDEVESSEQLNLCPSKS 60
           MN YGIDSKQEIQQNHGLITD YSQNFRAQQP RMG CVHLSAMDEVESSE+LN CPSK 
Sbjct: 1   MNAYGIDSKQEIQQNHGLITDYYSQNFRAQQPRRMGACVHLSAMDEVESSERLNSCPSKP 60

Query: 61  SSTIINLFESPTSAFFATEQCMGIPPIQFQSGSSSFDMASDSLSTIFQSSGENFSLDSAE 120
           +STIINLFESPTSAFFATEQCMGIPPIQFQSGSSSF    +SLSTIFQSSGENFSLDSAE
Sbjct: 61  TSTIINLFESPTSAFFATEQCMGIPPIQFQSGSSSF----NSLSTIFQSSGENFSLDSAE 120

Query: 121 HSGVDSEFSNTLQSVVKSQLCKRSFNGFPKTSFAEHKVFDESSPTIKKHYSVPFKDQVVC 180
            SG+DSEFSNTLQSVVKSQLCKRSFNG PK SF EHKVFD SS TIKKHYSVPFKDQ+ C
Sbjct: 121 QSGLDSEFSNTLQSVVKSQLCKRSFNGLPKASFVEHKVFDGSSNTIKKHYSVPFKDQIGC 180

Query: 181 YNSIAQPSFCSNSPRFSGLSASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRL 240
           YNSIAQPSFCSNSPRFS LS S+GSGSSSSSFNGNGFT KTRIRWTQDLHEKFVDCVNRL
Sbjct: 181 YNSIAQPSFCSNSPRFSCLSGSIGSGSSSSSFNGNGFTAKTRIRWTQDLHEKFVDCVNRL 240

Query: 241 GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAESR 286
           GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAE R
Sbjct: 241 GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAERR 281

[Close]

BLAST of Lsi01G019990 vs. NCBI nr
Match: gi|449457343|ref|XP_004146408.1| (PREDICTED: uncharacterized protein LOC101221638 [Cucumis sativus])

HSP 1 Score: 490.7 bits (1262), Expect = 1.8e-135
Identity = 252/285 (88.42%), Postives = 258/285 (90.53%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDCYSQNFRAQQPWRMGTCVHLSAMDEVESSEQLNLCPSKS 60
           MN YGIDSKQEIQQNHGLITD YSQNFRA+QP RMG C HLSAMDEVESS+ LN CPSK 
Sbjct: 1   MNAYGIDSKQEIQQNHGLITDYYSQNFRAEQPRRMGACAHLSAMDEVESSQHLNSCPSKP 60

Query: 61  SSTIINLFESPTSAFFATEQCMGIPPIQFQSGSSSFDMASDSLSTIFQSSGENFSLDSAE 120
           SSTIINLFESP SAFFATEQCMGIPPIQFQSGSSSF    +SLSTIFQSS ENFSLDSAE
Sbjct: 61  SSTIINLFESPASAFFATEQCMGIPPIQFQSGSSSF----NSLSTIFQSSAENFSLDSAE 120

Query: 121 HSGVDSEFSNTLQSVVKSQLCKRSFNGFPKTSFAEHKVFDESSPTIKKHYSVPFKDQVVC 180
            SGVDSEFSNTLQSVVKSQLCKRSFNG PK SF EHKVFD SS TIKKHYSVPFKDQ+ C
Sbjct: 121 QSGVDSEFSNTLQSVVKSQLCKRSFNGLPKGSFVEHKVFDGSSDTIKKHYSVPFKDQIGC 180

Query: 181 YNSIAQPSFCSNSPRFSGLSASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRL 240
           YNSIAQPSFCS SPRFS L  S+G GSSSSSF+GNGFTTKTRIRWTQDLHEKFVDCVNRL
Sbjct: 181 YNSIAQPSFCSTSPRFSCLGGSIGPGSSSSSFSGNGFTTKTRIRWTQDLHEKFVDCVNRL 240

Query: 241 GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAESR 286
           GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAE R
Sbjct: 241 GGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYMPESAERR 281

[Close]

BLAST of Lsi01G019990 vs. NCBI nr
Match: gi|659082982|ref|XP_008442128.1| (PREDICTED: protein PHR1-LIKE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 441.0 bits (1133), Expect = 1.7e-120
Identity = 227/251 (90.44%), Postives = 233/251 (92.83%), Query Frame = 1


Query: 35  MGTCVHLSAMDEVESSEQLNLCPSKSSSTIINLFESPTSAFFATEQCMGIPPIQFQSGSS 94
           MG CVHLSAMDEVESSE+LN CPSK +STIINLFESPTSAFFATEQCMGIPPIQFQSGSS
Sbjct: 1   MGACVHLSAMDEVESSERLNSCPSKPTSTIINLFESPTSAFFATEQCMGIPPIQFQSGSS 60

Query: 95  SFDMASDSLSTIFQSSGENFSLDSAEHSGVDSEFSNTLQSVVKSQLCKRSFNGFPKTSFA 154
           SF    +SLSTIFQSSGENFSLDSAE SG+DSEFSNTLQSVVKSQLCKRSFNG PK SF 
Sbjct: 61  SF----NSLSTIFQSSGENFSLDSAEQSGLDSEFSNTLQSVVKSQLCKRSFNGLPKASFV 120

Query: 155 EHKVFDESSPTIKKHYSVPFKDQVVCYNSIAQPSFCSNSPRFSGLSASVGSGSSSSSFNG 214
           EHKVFD SS TIKKHYSVPFKDQ+ CYNSIAQPSFCSNSPRFS LS S+GSGSSSSSFNG
Sbjct: 121 EHKVFDGSSNTIKKHYSVPFKDQIGCYNSIAQPSFCSNSPRFSCLSGSIGSGSSSSSFNG 180

Query: 215 NGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI 274
           NGFT KTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI
Sbjct: 181 NGFTAKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI 240

Query: 275 AKYMPESAESR 286
           AKYMPESAE R
Sbjct: 241 AKYMPESAERR 247

[Close]

BLAST of Lsi01G019990 vs. NCBI nr
Match: gi|1009161523|ref|XP_015898945.1| (PREDICTED: uncharacterized protein LOC107432339 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 150/325 (46.15%), Postives = 195/325 (60.00%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDCY-------SQNFRAQQ-PWRMGTCVHLSAMDEVESSEQ 60
           MN   ID ++  Q NHGLI+DC        S +F  QQ PW MG  V    MD+  S  Q
Sbjct: 1   MNDNRIDCQERNQPNHGLISDCNFEYTTCSSHHFGVQQQPWNMGVWVQQPTMDQGGSQIQ 60

Query: 61  LNLCPSKSSSTIINLFESPTSAFFATEQCMGIPPIQFQ-----SGSSSFDMASDSLSTIF 120
            +L   K S+TI++ FESPTSAF+ATE+CMG+P  + Q     +  S      +      
Sbjct: 61  -HLGHGKPSTTIMSRFESPTSAFYATERCMGLPQYECQVVGYPALGSHTSRTCEGQFPSG 120

Query: 121 QSSGENFSLDSAEHSGVDSEFSNTLQSVVKSQLCK-RSFNGFPKTSFA------------ 180
           QSSG+N   DSA+ +    EF N+LQ  VK QLC  +S   F K++              
Sbjct: 121 QSSGDNCYSDSADQADPKFEFRNSLQPSVKPQLCSFQSNRSFEKSNHISCSNMQEGKLFG 180

Query: 181 --EHKVFDESSPTIKKHYSVPF---KDQVVCYNSIAQP----SFCS-----NSPRFSGLS 240
             +HK+ ++++ ++++++SVPF   +D  V  NS + P    SF S      SPRFS  +
Sbjct: 181 HQQHKLHEDNALSVRRNFSVPFIENQDHAVYSNSFSSPLAHLSFSSPHQQKQSPRFSSGN 240

Query: 241 ASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGL 286
             V + +SSSS      + KTRIRWTQDLHEKFV+CVNRLGGAEKATPKAILKLM+SEGL
Sbjct: 241 GCVTTANSSSS--AAVLSNKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMESEGL 300

[Close]

BLAST of Lsi01G019990 vs. NCBI nr
Match: gi|1009161525|ref|XP_015898946.1| (PREDICTED: uncharacterized protein LOC107432339 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 150/325 (46.15%), Postives = 195/325 (60.00%), Query Frame = 1


Query: 1   MNGYGIDSKQEIQQNHGLITDCY-------SQNFRAQQ-PWRMGTCVHLSAMDEVESSEQ 60
           MN   ID ++  Q NHGLI+DC        S +F  QQ PW MG  V    MD+  S  Q
Sbjct: 1   MNDNRIDCQERNQPNHGLISDCNFEYTTCSSHHFGVQQQPWNMGVWVQQPTMDQGGSQIQ 60

Query: 61  LNLCPSKSSSTIINLFESPTSAFFATEQCMGIPPIQFQ-----SGSSSFDMASDSLSTIF 120
            +L   K S+TI++ FESPTSAF+ATE+CMG+P  + Q     +  S      +      
Sbjct: 61  -HLGHGKPSTTIMSRFESPTSAFYATERCMGLPQYECQVVGYPALGSHTSRTCEGQFPSG 120

Query: 121 QSSGENFSLDSAEHSGVDSEFSNTLQSVVKSQLCK-RSFNGFPKTSFA------------ 180
           QSSG+N   DSA+ +    EF N+LQ  VK QLC  +S   F K++              
Sbjct: 121 QSSGDNCYSDSADQADPKFEFRNSLQPSVKPQLCSFQSNRSFEKSNHISCSNMQEGKLFG 180

Query: 181 --EHKVFDESSPTIKKHYSVPF---KDQVVCYNSIAQP----SFCS-----NSPRFSGLS 240
             +HK+ ++++ ++++++SVPF   +D  V  NS + P    SF S      SPRFS  +
Sbjct: 181 HQQHKLHEDNALSVRRNFSVPFIENQDHAVYSNSFSSPLAHLSFSSPHQQKQSPRFSSGN 240

Query: 241 ASVGSGSSSSSFNGNGFTTKTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGL 286
             V + +SSSS      + KTRIRWTQDLHEKFV+CVNRLGGAEKATPKAILKLM+SEGL
Sbjct: 241 GCVTTANSSSS--AAVLSNKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMESEGL 300

The following BLAST results are available for this feature:

BLAST of Lsi01G019990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHL5_ARATH	3.7e-27	39.83	Myb family transcription factor PHL5 OS=Arabidopsis thaliana GN=PHL5 PE=2 SV=1	[more]
PHR3_ORYSJ	1.1e-23	60.47	Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica GN=PHR3 ...	[more]
PHR3_ORYSI	1.1e-23	60.47	Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica GN=PHR3 PE...	[more]
PHR2_ORYSJ	1.2e-22	52.29	Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. japonica GN=PHR2 ...	[more]
PHR2_ORYSI	1.2e-22	52.29	Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica GN=PHR2 PE...	[more]

BLAST of Lsi01G019990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L162_CUCSA	1.3e-135	88.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499310 PE=4 SV=1	[more]
A0A061F4K8_THECC	2.3e-52	44.65	Myb-like HTH transcriptional regulator family protein, putative isoform 1 OS=The...	[more]
A0A061EWJ5_THECC	5.1e-52	44.94	Myb-like HTH transcriptional regulator family protein, putative isoform 2 OS=The...	[more]
B9SWI3_RICCO	3.7e-50	43.29	Transcription factor, putative OS=Ricinus communis GN=RCOM_0277900 PE=4 SV=1	[more]
A0A0L9TU87_PHAAN	1.2e-48	46.71	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g026500 PE=4 SV=1	[more]

BLAST of Lsi01G019990 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06800.1	2.1e-28	39.83	myb-like HTH transcriptional regulator family protein	[more]
AT4G28610.1	5.8e-23	62.34	phosphate starvation response 1	[more]
AT5G29000.2	3.8e-22	62.03	Homeodomain-like superfamily protein	[more]
AT3G04450.1	6.4e-22	58.33	Homeodomain-like superfamily protein	[more]
AT3G13040.1	2.4e-21	61.54	myb-like HTH transcriptional regulator family protein	[more]

BLAST of Lsi01G019990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082980\|ref\|XP_008442127.1\|	3.5e-139	90.53	PREDICTED: uncharacterized protein LOC103486080 isoform X1 [Cucumis melo]	[more]
gi\|449457343\|ref\|XP_004146408.1\|	1.8e-135	88.42	PREDICTED: uncharacterized protein LOC101221638 [Cucumis sativus]	[more]
gi\|659082982\|ref\|XP_008442128.1\|	1.7e-120	90.44	PREDICTED: protein PHR1-LIKE 1 isoform X2 [Cucumis melo]	[more]
gi\|1009161523\|ref\|XP_015898945.1\|	1.9e-55	46.15	PREDICTED: uncharacterized protein LOC107432339 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009161525\|ref\|XP_015898946.1\|	1.9e-55	46.15	PREDICTED: uncharacterized protein LOC107432339 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G019990.1	Lsi01G019990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 224..273 score: 1.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 220..275 score: 2.7
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 219..275 score: 1.9
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 218..274 score: 7.35
None	No IPR available	PANTHER	PTHR31314	FAMILY NOT NAMED	coord: 1..285 score: 7.0
None	No IPR available	PANTHER	PTHR31314:SF7	MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN	coord: 1..285 score: 7.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G019990	Csa4G499310	Cucumber (Chinese Long) v2	culsiB250
Lsi01G019990	CSPI04G20460	Wild cucumber (PI 183967)	cpilsiB263
Lsi01G019990	Cucsa.353890	Cucumber (Gy14) v1	cgylsiB572
Lsi01G019990	CmoCh03G000340	Cucurbita moschata (Rifu)	cmolsiB589
Lsi01G019990	Cla011667	Watermelon (97103) v1	lsiwmB146
Lsi01G019990	MELO3C008929	Melon (DHL92) v3.5.1	lsimeB152
Lsi01G019990	ClCG04G002100	Watermelon (Charleston Gray)	lsiwcgB135
Lsi01G019990	MELO3C008929.2	Melon (DHL92) v3.6.1	lsimedB159
Lsi01G019990	Cla97C04G069710	Watermelon (97103) v2	lsiwmbB133
Lsi01G019990	CsGy4G019000	Cucumber (Gy14) v2	cgyblsiB243
Lsi01G019990	Carg12678	Silver-seed gourd	carlsiB260
Lsi01G019990	CsaV3_4G030620	Cucumber (Chinese Long) v3	cuclsiB279

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G019990	Cucurbita maxima (Rimu)	cmalsiB792
Lsi01G019990	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G019990	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G019990	Cucurbita pepo (Zucchini)	cpelsiB399
Lsi01G019990	Silver-seed gourd	carlsiB259
Lsi01G019990	Silver-seed gourd	carlsiB430
Lsi01G019990	Watermelon (97103) v2	lsiwmbB136
Lsi01G019990	Wax gourd	lsiwgoB173