Lsi01G019950 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G019950
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	RING/FYVE/PHD zinc finger protein
Location	chr01 : 26713127 .. 26727860 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATAAGAAGGGAGTTGTATAGTGTATTATCCTTCTCATACGCTGGTGTTTGTTGGCAACATGTTCAAAAAGTAGTGAAGTGAAGTCCATATCTCTTTCTCTCAACTCTCACGCCATTCACTTGCCCACCAAACCAAAACGCCAGATGCAGAGTAGATCACTCCAACAAGAAGACATACACCAGAACTTGAATCACTGTACCATCTTATCATTTTCTTCTCCGATTTGATTCCTGTTTTTCCCCCAGGTCAGTCCATCTCTCTCTTCTCCTTTCTTTACTTTCGCATCATTCTATGGAATCTCGTTTTCTTTTTGTTTCATTGCTGCTGCTGCGTATTTGACATGCTTACTTTTATTCCCCCTTTCTGCCTGGTTTTTGATTGTATACTGGGAATCATATGCATTCTCTGGAATTCTGCTGATCTACTGCTGTTTCTTTCTTTTCTTTTTTTTGGGTCTTGCTTCTTTTGTTCTACTTCATTACAATTCCTCAGTTCAAGTTCATGTTGTGGTAAAATTGCTCAGGTGTAGGGATTTTGCTTCCCGACGAACACTATTGTGCTTGGGGTCGGACGACAACGATATACGTTCATTGTGCAGTTGGTACTGATGGTCAATTCTTAAACTGGGCAGATCGAATTACTTGGTGTATCAGCCGAGGATGATTTGTTTCTTGTCCTCATTTTGCCACTGCCAAGTAGTGATTTTGTCTAATTTTCATTGAGTGCTCGGGGAGAATTATGCCTGAATTGGCTGATTTTTGGACTTATTGAAGTAGAATGGCTGAGACAGTAATCTAAGAGCTGGTCTAGCCTTTTTAAATCTTTGTGCTGCATCTCTGATATGATGGTTAAGGAAAATTTGCTGCAGAGAGTAGATGACAATGCTAAAGAGAATGATTGTTCGACTATTGGGAATGAAGATTTGGGTTCTCAGTCTCGCCACAGTGTAGGGAAGGAATCTGGGGCTAGTTGTCGTGTGTGTCAATGTATTGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTGGGCATCACTCCTCCAATTGTGGAAGCAAGGAAAAGTGATGGGGATTCTAAGCCTGAGAAGCAAAGTGCAGAGAATGTTGATGGTGGTTCTGTGCTGAAAAAAGATGTTAAAGGGGATTCTGGTTCAATTAAGTTCATAGGCCCTAATGGGGAGGTCTTCATTTGCAAAGCTGATATTGAAATGGGTTCATGTCATCATGAAGATGCATTAGTGGAACTTGGGTGTTCTTGCAAGAGTGACCTTGCACTTGTACACTATGCATGTGCTCTCAAATGGTTTGTCAGCCATGGATCTACAGTTTGTGAAATCTGTGGATGTGTTGCGGAAAATATTAGAACCGATGACTTTAGAAAGGTTGTGAGTTCTTTGAAAGAATATGAAGCTTTGAGGGAAAGAACTGTTAGTGGGGAAGCTAATCCTATGCAGACTATTGCTAGTACCGATATAGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTAAGTGAAATCTCGTTGTGGTTCAGTCCTCATAATTATAGTAGCAACATTAACTCTACTGCAGCCTCCCAGGTTGTTTCTGAACATCTGAATACCATCTCAGAAAATGTTGTTCATTCCGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGGCTGCTTACTGTTACGCTTGCTTGCCTCATAGCTCCTCGTGTGGGGAAGGTAAGTCTTTGTAGTTATTTGTATTGTAGTAATTCAGATATATTTTTATTGTCAAAAAGGTTCATTGAGAATTTTCCTATTTTAAAATTGAAATTCAAAGAACTGGGAAATACTGATGCATTAAGCTTCTCAGTAAGCCACACTTGACTAACACACCCAATAGCGCTTTAGATGTCAGAGGCTACCGTCCTTGTGTCTTATTAAAAAATCATTGCCTTGCTCGTTTATTAATTTGACATTGTTTCTTTTGGGTATTTGACAACAAAAATCTTTCGTTCTTTTTAAAAGTTTCAATCCTTCTTCCTTTGAGTCGCTAATACTTTGGAACACGCTTTTAGTTCTTGAGAACATCTAGCCTTGTTGTTATTATTATGTTTATTCTTTTTTGTAAATTCTATGTATCAGATTTTGTTTTGTAGTTTATTCATATGCACCTAGTTAACTCTTTCTGCTTTTTCTTCCTTACCCTTTTTCTACAAAGAGCCATTAAATTTCATTGATGAATAAAATAATTGAGGGAGTGAATAGACTCCCAATACCAAAAAGCGCATTTGAAGAAAGTTCTCCAATTTAAAATTAGGTGGAAAGACTATAATTGGTAAAAGGGTGATTAAGACTATAATTGGTAAAAGGGTGATTACATTTACACCAATACAAAACATGAAAAATATCAAATCCATGGAATTACCAAAACTTGGCTGCTGGTCATTGAAACTTCGCCCATTTCTCAACAACCAAAGAGTCCAAAAGAAAACGTTGTTATAGCAAGCCCAAGAGTTTTGATATCACTTTTTTTTCAATTATTATTTTTAATTTTTACTTATAATTATAATTATTATTTTCAGTGAGAAACCAACCTTTCATTGAGAAAATGTGAAAGAATGCAAATAGGAGCATCCAAAGAAAGAAAAAGAAGCCCACAAAAAGAAATCCTGTTAAAGGAGCAAAGACCTAATAAATAATTACAAAAAAATTTTGTGACCTAAACTCAAAAAGAAATATTGAACCTAACAGAGATCCAAACATCCCACAAGTTACTCTCAGCTCCTCTAAAGATTCTATTGTTCCTTTCCTCTTGTAAACCCCACAAGAAGTGCACACCCCGACTTGCCACAAAAATCTCCCTTTCTCACAAAGAGGCTGATGGAGGAGGAACTCTTCGATAATCTCTTTGTAGTCTCTATGACTGGCCATTTGGAAATCAAAAGTGTTATAACGATACCTTGAAATTGATTGCGAGAACTTAAGTTTTCCTCCGCTTTTTGACAAAGAATGCAACTAAACAACCTAATCAATGTGGGAAACTCCCTCGTAAATCAATCCAACGTGTGGTCTCCTTTGTCAATCACCTGCCAAATAAAATACTTCACAAGTTTTGAGATTTTCATCTTCCAAAGAGATGAGAAAACAAACTTGCTAGAAGGGTAAGAGTCGAGTAACCAACCAAAGAATGAGTTACAATAGAAACTCCTAGTAGGGTTAGGGCTCCCAAGTACTAAAATTCCTTTATTATTTAAACTCAAACTCTGATATGCTAAAACTTGGTGTTACCGCAAGTGCACGGGTCAAGTTATAATATAGTAAAATGGCCTAAGCCGAGTATTATCCTTAGGGAATTGGATTGATTATTCTTTTAGCTATTCAGAGATTCTTCCATTTTTATTTAAGGGACCAACTTGTAATGATACTTAACTAATCTAAAAAAGCAAATAAAAGTGATCAATATATGAAAATTATCAACTAAGAGATGTTTTAGGAAATATATTTCATCAAAGTTATTATTAAACACAATTGCTTGATCCTTAAAATAATTAACACAACACCTACATCTAGAAGTCTTTTATCCGGATTGAATCTTTTGAAAACAATCTTTTCTTTTACTCAAACCCTAAGTACTAATCGCTTGAAACTAGATGATTAAGCAAAACGTTAAGAGTCTTCATTAACAATCTCTACTGTTTTCAAACGATAGTCTAGCATGCATGATCAAATCTAAACTGTACTCGCTAAAGCAAGATTTAAATCATGGAATCATTCAAATATTGATCAAACATTAAAAAACATTAAGAACGATCATGCTAGAAAGCGTAAATGCAAATTAATATTCAAGAAGCAAAGTGTTCAATAATTTGAACCTAAAAATTCATCTACCCCTAAAACTATGAGAAATTTAACCTAACATGGCTTCCATGGACAGAACCGATGTTAGAATACCAAAATACAAACAAGAATTCAAGAATAAAGAAAGGGAAGAGAAGTTACCCGGCTTCCAAGCACGTCTTCGAGATGGATTTGTCCATCCAACGACCCTCGAACCTTCTGACATCATGAGGACTTCATATTTTGCTCTAAACTCTTTCTCTAGGTCTCAAATATTCAAAATTATGATCCTTATTTCGGCTGCAGACCTTCCAATTTATAGAATTTTGAAACTTGTAGCCTAAGATCTTTCCATCATGGTTGCCTAAATCCTAGCGCTGCGGCACTCCCTGCCCAATGCTGCAGCGCTTCCAATAGCGTTGCGGCTCTTGTCAATTGCTAACATTTAGATGCTCTTGGGTATTTGCGTTGGGGCAGTACAGGCCTAGCGTTGCGGCCCTGCATTAGGGTTTTCCATGTTTCTCTTCACTTTTTTGTTTGGTTTTGGCTCGGTTTGGTTCTTTTGGCTTCCAAAACTCATCTTCTTCATATTTACATAAAAACCACTAGCAAATAACATTAAATCTAATAAAAACATCTCTAAATTAAAGACACTTTTCAAGTGCTTTTCACTATCTCGAACTTAGAGATTTACTAGTCCCGAGCAAATATAAAACAAAACCATAGGGAAAGTCAAAGTAAGTGTACTAAGATTCATGCCTCAGATAATAACATATTAGGGGGTGTTTGGCCCACCAACATGAGTTGAGTTGAGTTGGTATATTTTACCAACTCACTCCAACTCTCCATTCTTTCAATGTTTTCAATGGCTCCACCCATCAGCCAATGTCCGCGACTATCGTTGTCACACTCGGGGAACCACCTCTGGGCCCCGACAACCACCTCCAATGACAACTTCGGCGGCCAATTTCGGGCTCTGGCAACCACCTCTGATGACAACTCTAGTGACCCAACTCCGACAACCAATTTCAGGCTCCGACAACCACCTCTGACAACAAGCTCTGATAACCAACTCCAACAACCACCTTCGTAGGCTCCGACAACCACCTCTGACTACAAACTTCGACGAAAATCACTTTCGATGATCAACTTCGAGCGAGCAACTCCAACGACTAACTCTGGGCTTCGACGACTAACTCTGAGCTTTGACAACCACCTTTGACGACAAACTCCAGCAACCAACTCCAATACCACTTTCATGCGACCAACTTCAGGCTTTAACAACCATCTTCGACTACAAACTCAGGTGAAAATCATCTTCGATGATCAACTTCGATGACCACCTTCGCGCGACCAACTCTGGGCTCCGAAAATCACCTCTGTGACAAACTCCAACGACCAACTTCAATCCACCTTCATGCAACCAACTTCAAGCTCCGATCACCACCTCCGACTGCAAACTCCACCAAAAATCATATTCGATAATCAACTTCGACAACCACTTCCGACTATTATAAGACTGATGATTGTTAAAGTATGTTGTAGGGTTGTTGATTATATAAATAGTAGTATTTTGTTTACATAAAGTGTAATATTTATACGTAGAAATTTATAAAATATATTTTTATTTAATTGAATTCACATATCAAATGAGTGTTAAGAATATTTGGAAAAACATGTATGTAGTTGAAAAGTATGTAACATATAACAAAAAAAAAAAAAAAAACATAAAATGAAGATTTTTTTTTCTTTTCTTCCTGAAGCATTTTCTAGCAAGAATTAGTGAAAAATGAAGATTTGTTCTCTAATGATCCTCCAAATTTGGAGGAATTGAAAGTGAAATTGTCAAAAAAAAATGTGGTGGCATTCCATTGGCTGCAAAGATGATGAGGGAGATTCAATAAAAAAATTCATGACAGAGTAAAAATACAGAGCAACAACAGGAAGAAGAAGAAAAAGAAGAAGAAGATGATGAAATTCATGGAGAAAAATTAGGAATCAAAAGTTTTGATTTCTCTTTGGTTTCCCATTTTATTTAACCATATCTCTGCAAGAAATGTAGTGGGTTAATTGTTGTTCATTACCTAAAAAAGAAAGAAAGAAAGAAATAAAAGCTTTAAAAATTAAAAGAAGAAAAAATTCAATCAATATTTTATTCAAACAAAGATGGGTAGAATTATTGAATAAAAAACTTACAAAACGAAAATAGTAATCATAAAAGCAGATTATTTAGAGTTCTAGAAACTGCACCAAATACCTCAGACATATGAACTCAACTCTGCACCCCAAACACAAACATATGAACTTAGACCAAATAACTTTGCAACCCAAACACAGACATATGAACTCTATAGGTATGTGAACTCCACAGACATATGAATTCCAGACATCCTATCTCAACTTGACGCTCCAAACAGCCCCTTAGGATCTCAAGTAAAAACATTCAAGCATATCTATATTGTTATGAACATTCAAGACCAAATCTTGTTATCCCCCATGTGTGTGTAAGCCTCCCTTAATTCAAAATACAAGGACTTAAATTAGGATTTAAGAGAGCGTCTCTAGTTTTCTCCCTACTCTAGCTCATGCACCAATCATCAAGAATCCACACATTTCAAACAACTAATATGTCCACTAAGGTGCCTTAAAGTTCAATTTCAACAGCCGTCTTAAACTTGCATTCTTTTACCTAGGGGCATTAGCTTTCACACATCCATTGTGGGGACTCGTACCTCGTCAATTCTTAGGCATCCTAACTAATCACAGCAAAGGTAGCTCTTTTTACCCCCATTCATGCATACACGTTACAAGTTTAAAAGAATTTAAATTGTGCAAAAAATAGTCATGTAAAGCTCATACATTTTATTGCATACTTTTTCAAAGGCAAATATGAACTTTTCTTTCTCCTTAGTCTAACATTACAAACCATCATGCATTTCAACTTTCTAACTGGTGGGGCCTTTCGAGGAGACAACCAAATACACTTAACTTAATCCTTTTCTAAGTTAAAGTTTCTAAATTAAAGTGACTACGTGCTCAAGATATGAGAGACGCAATGAGGAAACATAATGTAAAGGGGGTCGATCCTTTTTTTTTCTTTCTTAAATAATTTTCATTGAGAATGAATGAAAAGAATACAAGAGCATACAGAAAGAAAAGCCTTCAAAAGGAAACACTCTTAAAGGAAAGGGCTCCAGTTATACCAAAAAGAACCTATAGGATAATGCTCATGTATTTTCCTCTCTTATTATTCACAAGGCTAGGATGGATTTCTTAAATAGAAGAAACACCCAATTACAAATAAGTAAATTACAAATAAGGAAAATATAACTATGGCAAATATAATAAAATAAATACAGTGAAAATATTAACAAAATAGGAAATAATCAACACTCCCCCTCTGGTTGAAAGATATCATTCATGGCCAGCTTGTCAATTAAGTTTATGAATTGCCACTTTGGAAGGCCTTTAGTTAGCACGTCTGCAATTTGTCCTGTTGTTGGAAGATAAAGTATGCATATTATTCCAGCATCAATCTTCTCCTTTATGAAATGTTTATCAACTTCAATATGTTTTGTCCTATCATGAAGGACCGGATTGTGGGCAATAGAAATTGCTGCTTTATTATCATAATAAATTCTCATGGGAATCGTCTGATAGAATTTCAGTTCTTCTAGTAGTCTTCTTATCCATATGCCTTCACAAATACCATGGGCTAATGCCCTAAATTCAGCTTTAGCACTACTTCTCGTGACCACACTTTGTTTTTTACTTCGCCAAGTAACAAGATTTCCTCCAACAAAGGAGCAATAACCCGAAGTGGATCTTCTATCAGTAGTACTACCTGCCCAATCTGCATCCGTGTAAACTTCGACATTTAGATGATCATGCTTTCTAAACAATATGCCTTTCCCAGGGGTACCTTTCAAATATCTCAAGATTCTATAAACGACATCAAAATGTGCTGGTCCAGGTGCATGCATGAATTGACTCACCATACTGACGGCAAAAGCAATGTCAGGACGTGTGTGTGAGAGATATATGAGTCTCCCCACAAGTTTTTGATACTTTTCTTTGTCTTTTATTTCTTTTTCAGTTGCAGCTTCTAATTTTAAGTTCTGCTCAATGGGTGTGTCAACTACCTTGCAACCAAGTAAACCTGTTTCTTTCAGGAGGTCAAGAATATATTTCCTTTGGTTGACAATAATGCCACTCTTGGACCTGGCAAACTCCATGCCTAGGAAGTACTTTAAGGTTTCTAGGTCTTTGATTTGGAAATCAGAAGCTAGTAGTTCCTTCACACAAGTCAGTCCTATTTCATCATTACCTGTAAGAATAATATCATCAACATACACTATCAAGACAATAACTTTGTCATTTTTTGTATGTTTATAGAACATAGTGTGATCAGCTTGACTTTGACTGAATCCATAGCTGGTGACTGTCTTCTCAAACCGTTCAAACCAGGCTCTAGGAGATTGTTTAAGGCCGTATAATGATTCTTTAACTTGCACACTTTGTTAACCCCGAGATCCATCTTGAAGCCAGGTGGCAGGTCCATAAAAACCTCTTCTTCAAGATCCCCATTAAGAAAAGCATTTTTAACGTCAAGTTGATAGAGAGGCCAATCAAATTAACTGCAACAGACAACAAAATTCTGATAGAGTTAATTTTAGCAACGGGCGCAAATGTTTCCTGGTAGTCAACTCCATAAGTCTGAGTGAACCCCTTAGCAACCAATCTAGCCTTGTATCTTTCGATACTACCATCTGCGTTACATTTTACAGTGAACACCCACTTGCATCCTACTGTTTTTTTGTCATTTGGTAGATCAACTATGTCCCATGTGCAATTTTGTTTTAGCGCATTCATTTCTTCCATCACTGCTAAATTCCAGTTCAAATCATTTAAGGCCTCCTGAATATTCCTTGGAATTAACAGGTCGGTTATTTTGGATGTGAAGGCTTTATGACTGTCAGACAATCTATGATAAGAAAGATAATTTGCAATGGGATATTTGACACATTTACGAGTACCTTTCCTAAGAGCAATTGGAAGATCAAGATCAGGAACATCAGGTAGGGAATTATGAGAAGAAGAAGAGTGTATGTTACCTGGATCTTCAGGATCATTCATCAGAGTATTAGATTGGTCCTGTGATAGATCAGATGTCTGTTCTCGATCCCTTTGAGTCAAGTTTCTTCTAGTATAAACCTGAAGTTCAGGTGTTAGTGTTGCTCCCCCCTGAAGAGGAACTTTCTATACTTGATATCATAGGACCAGTGTTCATAATTTCAGGGTCAATAATGTGTGGGGTTTCCCAAAAATGATCTTCAAGATTAGATTTCTCTCCCTGAAGAGAATTTGGGCTAAAATAAGGTTGATTTTCTAGAAATACTACATCCAAACTCTCTACATACTTGTTGGTCGAGGGGTCAAAACATTTATAAGCTTTCTTATGAGGAGCATAACCTACAAAGATGCATTTAATGGCTCGAGGATCAAGTTTAGTGCGAGCAAGAGAAGTATGAACATATGCAAGACACCCAAATAATTTCATTGGTAAGTCAGAAAAAAGCCTAACATTAGGAAAAAGATCTTTAAAGTGATTGAGAGGCGTTTTAAAATTCAAAACCTTCGGCATTCGATTGATCAAGTAGGTAGCAGTAAGGACTGCATCACCCCATAAATATTTTGGAACATTCATAGAAAACATAAGGGCACGGGCAACTTCAAGGAGATGTCTATTTTTTCGTTCAGCAATGCCATTTTGCTGAGGAGTATCACGACATGTAGCTTGATGAACAATACCCTTATCGTGCAAAAAAGTTTTCAAGTGTTCATTGAAATATTCAGTACCATTATCAGAGTGAAGAATGCGGATTTTATTTTGAAATTGAGTCTCAATCATATTGTAAAAACGAACAAAAACGTCTTTTACTTCTAATTTTTTGGTTAATAAATAAAGCCAGGTTAGATGAGTGTGATCATCTATAAAGGTAACAAACCAACGCTTACCACTATGTGTCAAGATTTTAGACGGTCCCCACACATCAGTATGAATTAAAGAGAAAGGTGAGGAAGCCTTGTAAGGTTTAGGCAAATAAGTGGATCGATGATGTTTGGCAAAAATGCAACTTTCACAATGAAAATCAGAACAATCAATTCCTTTAAATAAATCTGGAAATAAATATTTTAAATAAAAGAAATTTGGATGCCCTAATCTACGATGCCAAAGCATGATAGTTTCTAGAACAGAGGAAGAACTGACACTACTGAAGCCCTGAGCCGTTTTATAACTAGAGGAAACTTTATCATCAAAGTAATAGAGACCATCAATCATTCTAGCACTGCCAATCGTCTCTGCCGAGTCCTGATCCTGAAAGGTACAATGAGTTCCACAAAAAATAACACGACAGTTAGCGTCCTTAGAGATTTGACTGACAGATAACAGATTACATGCTAACTTTGGAACATGAAAGACAGAACGTAAAGTAAATTTTTGAGTCAAAGGAATATGTCCTTTGCCTGCAATAGGGGCAAAATTACCATCTGCAATGCGAATTTTGGAAGTACTATGTATCAGAGAGTATGATTCAAACAAAGAGGAGGAACTAGTCATATGAGCAGTGGCTCCAGAATCTATAATCCATGGAGAAGAATTTATGCAAGAAAATGCTTGAGGATAATTACCTGCTTGTGCCAAGGAAACACTAGGATTACCAGATGAAGAACTAGTTTTTAGCAGTTGCAGGATTTGGTCAATCTGCTCCTTGCTAAACAGATTAGAGTCAGTCACATTTGCACTGGAGGTATGTTGATGGGAGTGTCTGTCACTTTGTTTAGAACTCTTCCAATTAGCAGGTTTTCCATGAAGCTTCCAACAGGTTTCATGAGTATGTCGAAGTTTATTGCAATGATCACACCAGACTCGGGGCTTTTCATGTGTCTTGTTGGGATGATCAGAGGTCTTCATGGCAGTATGTTCAGTTACCAACACAGAACTCTCAACTGACTCAATAGGTTTTTTTCCAATCATCACATTCCTGCGACTTTCTTCCCTGCGAACTTCAGAGAAAACATCATTAATAGTAGGAAGAATAATTTTCCCAATAATTCTACCTCGAACTTCATCAAATTCAACATTGAGGCCAACAAGAAATTTGTAGATACGGCTGTCCTCCACAGTTTTCCTGTAATGTTTTTGGTCATCTGTAGATTTCCACTCATATGTATCAAAGAGATCAAGATCTTGCCAGATTCTCTTAAGAGAGTGAAAATATTGCGTGACTGATTGACCTCCTTGTCGCATATCTCCTAATTTGAGATTTAACTCAAATACTTGTGACTGGTTTCCCAAATCAGAGTACATCTGTGTCACACTATCCCACAATTCCTTTGCAGTGGAGTAGCACATATAATTGCAGCTGATGTCTTCAACCATGGAATTAACGAGTCACGTCATGACCATGGAATTTTCAGCATCTCATATAGCAAAGGACGGATCCTCTGGAGGAGGGTTGCTTTTCTCTCCCGTAATATAGCCTATCTTTCCTTGTCCACGGATATACATCCGAACACTTTGAGACCAACGAAGGAAATTATCTCCATTAAGTCGAATAGAAGTTATTTGGACAGTAGGAGGATTGAGGTGGATTCGATTGTCTGAAACCTTTGTAATAGATGCCTTTTCATCTGACATGGTGGCAGTTACAGTGAGGCAGCGACTTACGGCTGAACCAAAGAGGTACCATGGCTGAAAAACAAAAAAAGAGTCAAATGATAGTACGGCTAACAAACGGCTACAGACAGTCGGAATAACGAGCTGCTGGTCGGATCCGGCGAGCAGAAAAAACGACGCACTCTGCTGAGGTACTGTGTAAGGACGGCGGCGGCGGCGCGGCGGTGTATGGGCGGCTCAAGGTGCGGTGGCAGTGGAGGTTTAATCTAGGGTTAGGATAGTTTTTAGGGTTTTTTTAGCTCTGATACCATGCTCAAAGTATGTATTTTCCTCTCTTATTATTCACAAGGCTAGGATGGATTTCTTAAATAGAAGAAACACTCAATTACAAATAAGGAAATTACAAATAAGGAAAATATAACTATGGCAAATATAATAAAATAAATACAGTGAAAATATTAACAAAATAGGAAATAATCAACAGATAACTATAACAATTCTTTGAAGTCGGAGCCCAAAGAGAAACTTGAATTCTATCCATGGAGTCCCCTCCAAACCTCTAAACACTTTGTTAAGCCACCCACTCCAAAGATCCCACAAGATAGTAGCCGCCTCGGCAAGTCATAAAGATTGGCCCATTTCGGCAAAAGGAAGATTAAGGAGGATCTTTGCAATCATATCATTAATACCCCTATGATGGGCAAACATGAAACCAAGAGCTGGAAGAAATGATCCCATATGGATCTCGCAAACACACATCTTCATAGAATATGATCCAAGTCTTCTTCCGCCTTTCGATAGAATAACTCCACTAACAAGGGTAACTTCCTCGACAACCGATCTAGAGTGTTAACTCCTCCATGTAAAACTTGCCAAGTAAAGAACTCCACCTTCTTTGGAATCTTAAGCCTCCATGAAGCAGAAAAAACACTCACTAATTGGAGAAGGGTCTCGTAAGCATTGTGTTAAAGAGTTGATATAATTTTAAATTTACCTTCACTCGTCAGCTTAAACTTTTCGGTCAGTTGGTGATTTAACATGGTATCAGAGCAGAAGTTCCAATGTTCAAAATCCTGCAATGTTATTTTCTCCCCAATTAATATTGATCTCCACTTGTTGGGTCTTCTATATATTTCAAGCCCACAACTTTTAAGTGTTGATGTAATATTAAATTTACCTTCACCTATCAACTTAAACTTTTGGGTCAATCGGTAATTTAAAACATTAAAAGAAAGATTTACAAGAGAACTCGCTAGAAGGGCCAGGAATCCAAACATGAAAATCCCTTCTTCCAATCCTAAAGTTGCACTCCTCAATCAAAGACTGCAGAGAGGAAACATCCACTGCTTCTCTATTAGACAACGAGTGCCTAAAACCAACAGACAAAGAAAGGGAGCTCCTTGACCAGACTAGAAAGTTAGCCACCAAAGGATTTTTAAAGGAGGACAAATGATAGAATGAGGAAACAAAGAGCAGAGGGTCTATTCCCTACCTACCAATCCTCCCAGAAGTACGTTTCCTTCCCTTCCCCAACCACACGATCAACAAGGTGAGAGAAAGAGGGGAGCTCATAAGAAATATCTTTCCACAGATCCCAATAGGTGCCTTTAACTCCACTCGACAACCACCAAAAGGGTGAGGAGTGTACTTGCTCTCAATAATCCTATGCCAAAGAGTCTTAGGTCAAGGGAAAAACACCAAAGCTGTTTAGTCAACAAGGCTTTGTTTTGGGTCCTCCTTAATTTCCCAATTTCTAACCCACCGAGGTTAACAAAGGTCTGAATAGCCATGGATCTATCGAAATGCAACCCCTTACCTTGACCAAGCTAGGAGCTCTAGATAGGGTGAAATGATAGATGGGAATGCCACTTAGAAAATAGCAAATAAGCGTTAATCTACTAGCTTTGGAGAATAAACTTTACTTTAGCGAATCCAATCTTTTCTTCTTAATGTCCTTGTATTCTTTCATTCTTTTCTCAATAAAAGCTTGGTTATTCATAAATAAAAGTGTTTTCACCATTTTTATTCGGAACTCGTATAATCTTGGTACGTTTCAATTACTTTCCTTCAATAGTATCAAGATATGTTATAACCTAGATTTGTGCGTGGGGAGTCTTCCACTCATGTTTCCTTTCCTCGTTGGCACCAAGGATGAAAGTGCCAAGCTTAATGTTATTACCTTTTGGGGGGAGAGTTCGTCCTCCTTTGATTCTAAGGATGCCAATATTGATATCAATGTTGATAACTGAATATCAATGGATGTTTTAGAAAAAAAGATCATAGATATTATAGAAACATGGAGAAATATGATGAATTTCTTCACAAAACTTCAAAACTAGCTTAGTTAAGTTATAAACCGCCTCTTAAGTACATATATTGATAACTCATGTTAACATGTGAGTTTATTATACAATAGATAATACTGAAATTTGATAAATGAATGAGATAAATTTTGTCAACACAAACAATCATTTAGACTTTATTAAAGTATAGGTACAAAATGTGATGGAATGAGTACATAATATTATTTATAGATTACTCTAAATAAATTATAGAACATAATAATACATTATGAGCATCAGTACATTTTACTTTATTAAAACACAAAAAAATTTGAGGGGAAAGAGACAAAATAAAATTATTCATTAATCGTCTAATTAAATTTGTTTAAAAAATATATATAATCACCAATATAAAATTGATTCAACCATTTGTAGGTGCTAGTTTCTCTTCGGACTACTAATGCTGAGGATTTTTGTAATCGTTCCATTCACTAATATCTTCTGAATGGAATGAGTTTGTGTTAGTCCATGTAAGCTTTTGTGCTTCATTAAATTTCATCTTATTATTGAAATCGTTTGGATCATTGAAAAGAAAAAAGAAAGCATGAATACTATAAAATGGAGAAATATGACTTCAGGAGTATTTTTCTTTTCTTTTTCTCCAACGTCATATCCTTTTGGGTTTCCTTTGATTCTGCTAGACTTTTTCTTGATATTCCTTAAAAGGAATTTCTATTTTTGTGCAGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGAGTTTGTGCGTTAACAGTAGTGGTTTTCTTCCGCTTTGTGAGTATAATGCATTTTATTTGGCCCTGACCTTGCTTTTCTGGCATTTTGTTTTATTATAGGAAACAATTTTATTCATTAGTAATGTATCGACGGGTGGAATAGACTAA

mRNA sequence

AGATAAGAAGGGAGTTGTATAGTGTATTATCCTTCTCATACGCTGGTGTTTGTTGGCAACATGTTCAAAAAGTAGTGAAGTGAAGTCCATATCTCTTTCTCTCAACTCTCACGCCATTCACTTGCCCACCAAACCAAAACGCCAGATGCAGAGTAGATCACTCCAACAAGAAGACATACACCAGAACTTGAATCACTGTACCATCTTATCATTTTCTTCTCCGATTTGATTCCTGTTTTTCCCCCAGGTGTAGGGATTTTGCTTCCCGACGAACACTATTGTGCTTGGGGTCGGACGACAACGATATACGTTCATTGTGCAGTTGGTACTGATGGTCAATTCTTAAACTGGGCAGATCGAATTACTTGGTGTATCAGCCGAGGATGATTTGTTTCTTGTCCTCATTTTGCCACTGCCAAGTAGTGATTTTGTCTAATTTTCATTGAGTGCTCGGGGAGAATTATGCCTGAATTGGCTGATTTTTGGACTTATTGAAGTAGAATGGCTGAGACAGTAATCTAAGAGCTGGTCTAGCCTTTTTAAATCTTTGTGCTGCATCTCTGATATGATGGTTAAGGAAAATTTGCTGCAGAGAGTAGATGACAATGCTAAAGAGAATGATTGTTCGACTATTGGGAATGAAGATTTGGGTTCTCAGTCTCGCCACAGTGTAGGGAAGGAATCTGGGGCTAGTTGTCGTGTGTGTCAATGTATTGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTGGGCATCACTCCTCCAATTGTGGAAGCAAGGAAAAGTGATGGGGATTCTAAGCCTGAGAAGCAAAGTGCAGAGAATGTTGATGGTGGTTCTGTGCTGAAAAAAGATGTTAAAGGGGATTCTGGTTCAATTAAGTTCATAGGCCCTAATGGGGAGGTCTTCATTTGCAAAGCTGATATTGAAATGGGTTCATGTCATCATGAAGATGCATTAGTGGAACTTGGGTGTTCTTGCAAGAGTGACCTTGCACTTGTACACTATGCATGTGCTCTCAAATGGTTTGTCAGCCATGGATCTACAGTTTGTGAAATCTGTGGATGTGTTGCGGAAAATATTAGAACCGATGACTTTAGAAAGGTTGTGAGTTCTTTGAAAGAATATGAAGCTTTGAGGGAAAGAACTGTTAGTGGGGAAGCTAATCCTATGCAGACTATTGCTAGTACCGATATAGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTAAGTGAAATCTCGTTGTGGTTCAGTCCTCATAATTATAGTAGCAACATTAACTCTACTGCAGCCTCCCAGGTTGTTTCTGAACATCTGAATACCATCTCAGAAAATGTTGTTCATTCCGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGGCTGCTTACTGTTACGCTTGCTTGCCTCATAGCTCCTCGTGTGGGGAAGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGAGTTTGTGCGTTAACAGTAGTGGTTTTCTTCCGCTTTGAAACAATTTTATTCATTAGTAATGTATCGACGGGTGGAATAGACTAA

Coding sequence (CDS)

ATGATGGTTAAGGAAAATTTGCTGCAGAGAGTAGATGACAATGCTAAAGAGAATGATTGTTCGACTATTGGGAATGAAGATTTGGGTTCTCAGTCTCGCCACAGTGTAGGGAAGGAATCTGGGGCTAGTTGTCGTGTGTGTCAATGTATTGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTGGGCATCACTCCTCCAATTGTGGAAGCAAGGAAAAGTGATGGGGATTCTAAGCCTGAGAAGCAAAGTGCAGAGAATGTTGATGGTGGTTCTGTGCTGAAAAAAGATGTTAAAGGGGATTCTGGTTCAATTAAGTTCATAGGCCCTAATGGGGAGGTCTTCATTTGCAAAGCTGATATTGAAATGGGTTCATGTCATCATGAAGATGCATTAGTGGAACTTGGGTGTTCTTGCAAGAGTGACCTTGCACTTGTACACTATGCATGTGCTCTCAAATGGTTTGTCAGCCATGGATCTACAGTTTGTGAAATCTGTGGATGTGTTGCGGAAAATATTAGAACCGATGACTTTAGAAAGGTTGTGAGTTCTTTGAAAGAATATGAAGCTTTGAGGGAAAGAACTGTTAGTGGGGAAGCTAATCCTATGCAGACTATTGCTAGTACCGATATAGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTAAGTGAAATCTCGTTGTGGTTCAGTCCTCATAATTATAGTAGCAACATTAACTCTACTGCAGCCTCCCAGGTTGTTTCTGAACATCTGAATACCATCTCAGAAAATGTTGTTCATTCCGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGGCTGCTTACTGTTACGCTTGCTTGCCTCATAGCTCCTCGTGTGGGGAAGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGAGTTTGTGCGTTAACAGTAGTGGTTTTCTTCCGCTTTGAAACAATTTTATTCATTAGTAATGTATCGACGGGTGGAATAGACTAA

Protein sequence

MMVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGASCRVCQCIESDRRGDAVLGFLGITPPIVEARKSDGDSKPEKQSAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFICKADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDDFRKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYSSNINSTAASQVVSEHLNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPRVGKKTAKSGLHILLGGVCALTVVVFFRFETILFISNVSTGGID

Homology

[Close]

BLAST of Lsi01G019950 vs. TrEMBL
Match: A0A0D2THY9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G037300 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.0e-117
Identity = 223/328 (67.99%), Postives = 265/328 (80.79%), Query Frame = 1


Query: 1   MMVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGA-SCRVCQCIESDRRGDAV 60
           MM KENL Q V+     + CS    +D G+ SR+S+ KE+G  +CRVCQC ESD+RGDA 
Sbjct: 1   MMGKENLPQPVNGGVSNDSCSNADIDDSGTYSRYSLDKEAGLPTCRVCQCSESDKRGDAA 60

Query: 61  LGFLGITPPIVEARKSDGDSKPEKQSAE-NVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC 120
           LGFLGITPP+ EA KS G++KP+ +  + +V+      K ++ +SG ++FI P GEVFIC
Sbjct: 61  LGFLGITPPLAEAVKSKGEAKPDTEGVQQDVESDESHSKSLRRESGFVEFISPEGEVFIC 120

Query: 121 KADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDD 180
             D+EMGSC H+DAL+ELGCSCKSDLALVHYACALKWFVSHGSTVCEICG  A+ IRT D
Sbjct: 121 STDLEMGSCRHQDALIELGCSCKSDLALVHYACALKWFVSHGSTVCEICGNPAKTIRTSD 180

Query: 181 FRKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPH-NY 240
           F+KVV SLK+YEALRERT SG+ NP Q  +S+ +DPDAVAA+RRQRLSEISLWFSPH N 
Sbjct: 181 FKKVVVSLKDYEALRERTASGDPNPAQIHSSSGVDPDAVAAIRRQRLSEISLWFSPHGNN 240

Query: 241 SSNINSTAASQVVSEH-LNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPR 300
           ++N +S+A SQVVSE   NT++E V  SE+PAT+WAVEGTGILLATGLLTVTLA LIAPR
Sbjct: 241 NNNHSSSAVSQVVSEQPTNTVTEEVTPSESPATKWAVEGTGILLATGLLTVTLAWLIAPR 300

Query: 301 VGKKTAKSGLHILLGGVCALTVVVFFRF 325
           VGKKTAKSGLHILLGG+CALTVVVFFRF
Sbjct: 301 VGKKTAKSGLHILLGGICALTVVVFFRF 328

[Close]

BLAST of Lsi01G019950 vs. TrEMBL
Match: A0A061DK17_THECC (RING/FYVE/PHD zinc finger superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_001601 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.2e-113
Identity = 218/327 (66.67%), Postives = 258/327 (78.90%), Query Frame = 1


Query: 2   MVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESG-ASCRVCQCIESDRRGDAVL 61
           M KE L   V+     + C    ++D G+ S+ S  KE+G A+CRVC C+ESD+RGDA L
Sbjct: 1   MSKECLPHAVNGGVSNDSCPNADSDDSGTYSQCSRDKEAGLATCRVCHCVESDKRGDAAL 60

Query: 62  GFLGITPPIVEARKSDGDSKPEKQSA-ENVDGGSVLKKDVKGDSGSIKFIGPNGEVFICK 121
           GFLGITPP+ EA KS+ ++KP      ++V+      K V  +SG ++FI P GEVFIC 
Sbjct: 61  GFLGITPPLPEAVKSNAEAKPNSNGIPKDVESDFSHAKSVGRESGFVEFISPEGEVFICS 120

Query: 122 ADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDDF 181
            D+E+GSCHH DAL+ELGCSCK+DLALVHYACALKWFVSHGSTVCEICG  A+NIRT DF
Sbjct: 121 TDLEIGSCHHHDALIELGCSCKNDLALVHYACALKWFVSHGSTVCEICGNPAKNIRTSDF 180

Query: 182 RKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYSS 241
           +KVV SLK+YEALRERT SG+ NP Q   S+ +DPDAVAA+RRQRLSEISLWFSPH+ ++
Sbjct: 181 KKVVVSLKDYEALRERTASGDPNPAQVHTSSGVDPDAVAAIRRQRLSEISLWFSPHSNNN 240

Query: 242 NINSTAA-SQVVSEH-LNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPRV 301
           N NS+AA SQ VSE  LNT +E V  +ENPAT+WAVEGTGILLATGLLTVTLA LIAPRV
Sbjct: 241 NNNSSAAVSQAVSEQPLNTFTEEVAPTENPATKWAVEGTGILLATGLLTVTLAWLIAPRV 300

Query: 302 GKKTAKSGLHILLGGVCALTVVVFFRF 325
           GKKTA+SGLHILLGG+CALTVVVFFRF
Sbjct: 301 GKKTARSGLHILLGGICALTVVVFFRF 327

[Close]

BLAST of Lsi01G019950 vs. TrEMBL
Match: F6H4F1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02640 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 4.9e-112
Identity = 217/328 (66.16%), Postives = 261/328 (79.57%), Query Frame = 1


Query: 2   MVKENLLQRVDDNAKENDCSTIGNEDLG-SQSRHSVGKESG-ASCRVCQCIESDRRGDAV 61
           M  EN LQ ++          I NE+ G   +RHS+ KE+G A+CRVCQC ESDRRG+A 
Sbjct: 1   MGNENHLQPINVGKSHEGHPYIENEESGVCSTRHSIDKEAGLATCRVCQCAESDRRGEAA 60

Query: 62  LGFLGITPPIVEARKSDGDSKPE-KQSAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC 121
           LGFLGITPP+ EARKSD   K   K+  +  +  +   K+ + +S  ++F+ P GEVFIC
Sbjct: 61  LGFLGITPPVQEARKSDELIKTNSKEVLKEAEDYASPTKNGRRESDFVEFVSPQGEVFIC 120

Query: 122 KADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDD 181
             DIEMGSCHH+D L+ELGCSCK+DLALVHYACALKWFV+HGST+CEICGC+A+N+RT D
Sbjct: 121 NTDIEMGSCHHQDTLIELGCSCKNDLALVHYACALKWFVNHGSTICEICGCIAKNVRTSD 180

Query: 182 FRKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 241
           F+KVV SLKEYEALRERT SGE   +Q   +  +DPDAVAA++RQRLSEISLWF+PHN +
Sbjct: 181 FKKVVGSLKEYEALRERTASGEP-VVQVRTNLGVDPDAVAAIQRQRLSEISLWFNPHNNN 240

Query: 242 SNINSTA-ASQVVSE-HLNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPR 301
           +N N++A ASQVVSE HLN ++E+ V +ENPAT+WAVEGTGILLATGLLTVTLA LIAPR
Sbjct: 241 NNNNNSAVASQVVSEQHLNIVAEDFVPAENPATKWAVEGTGILLATGLLTVTLAWLIAPR 300

Query: 302 VGKKTAKSGLHILLGGVCALTVVVFFRF 325
           VGKKTAKSGLHILLGG+CALTVVVFFRF
Sbjct: 301 VGKKTAKSGLHILLGGICALTVVVFFRF 327

[Close]

BLAST of Lsi01G019950 vs. TrEMBL
Match: W9QSZ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007915 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 8.6e-109
Identity = 207/311 (66.56%), Postives = 247/311 (79.42%), Query Frame = 1


Query: 17  ENDCSTIGNEDLGSQSRHSVGKESG-ASCRVCQCIESDRRGDAVLGFLGITPPIVEARKS 76
           +  CS   +++L S SRHS  K+ G  +CRVCQC+ES++RGDA L FL I PP+ EA KS
Sbjct: 15  DEGCSPSDSDNLESYSRHSSEKDVGLGTCRVCQCVESEKRGDAALEFLDIVPPLQEACKS 74

Query: 77  DGDSKPEKQ-SAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFICKADIEMGSCHHEDALV 136
           +G+  P+K+   +N +    +KK+V+ +S  ++ + P+GEV IC  D+EMGSC H+D L+
Sbjct: 75  NGEMNPDKKVIVKNAESDVSVKKNVR-ESRLVELVSPDGEVLICNVDLEMGSCDHQDTLI 134

Query: 137 ELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDDFRKVVSSLKEYEALRE 196
           ELGCSCK+DLALVHYACALKWFV+HGSTVCEICG VA+NIRT DFRKVV SLKEYEALRE
Sbjct: 135 ELGCSCKNDLALVHYACALKWFVNHGSTVCEICGHVAKNIRTADFRKVVVSLKEYEALRE 194

Query: 197 RTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYSSNINSTAASQVVSEH- 256
           RT SGE NP     ST +DPDAVAA+RRQRLSEISLWF PHN S+N N    SQ VSE  
Sbjct: 195 RTASGEPNPAHVQTSTGVDPDAVAAIRRQRLSEISLWFGPHNNSNNNNHAPVSQAVSEQS 254

Query: 257 LNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPRVGKKTAKSGLHILLGGV 316
           LNT++E+V  +EN A +WAVEGTGILLATGLLTVTLA LIAPRVGKKTA+SGLHILLGG+
Sbjct: 255 LNTVTEDVTPAENLAAKWAVEGTGILLATGLLTVTLAWLIAPRVGKKTARSGLHILLGGI 314

Query: 317 CALTVVVFFRF 325
           CALTVVVFFRF
Sbjct: 315 CALTVVVFFRF 324

[Close]

BLAST of Lsi01G019950 vs. TrEMBL
Match: M5WFU4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007509mg PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-107
Identity = 212/328 (64.63%), Postives = 255/328 (77.74%), Query Frame = 1


Query: 2   MVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGAS-CRVCQCIESDRRGDAVL 61
           M KENL +     ++E D S   ++ LG+ SRHS+  E+G S CRVCQC ESD+RGDA L
Sbjct: 1   MGKENLSEASIGASEEGD-SPGQSDSLGTHSRHSLDNEAGLSTCRVCQCAESDKRGDAAL 60

Query: 62  GFLGITPPIVEARKSDGDSKPEKQSA-ENVDGGSVLKKDVKGDSGSIKFIGPNGEVFICK 121
            FLGITPP  E   S G  KP+ + A ++ +G   +KK+   +SG ++FI P+GEVFIC 
Sbjct: 61  EFLGITPPTQETCISHGQVKPDSRVALKDAEGDMYVKKNAGKESGFLEFISPDGEVFICG 120

Query: 122 ADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDDF 181
           AD+E GSCHHED LVELGCSCK+DLALVHYACALKWF++HGSTVCEICG +A+NIR  DF
Sbjct: 121 ADLETGSCHHEDTLVELGCSCKNDLALVHYACALKWFINHGSTVCEICGRLAKNIRISDF 180

Query: 182 RKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYSS 241
           +KV+ SLKEYE LRERT  GE +  Q   ST IDPDAVAA+RRQRLSEISLWF+PHN S+
Sbjct: 181 KKVMISLKEYEILRERTARGEPDATQVNTSTGIDPDAVAAIRRQRLSEISLWFTPHNNSN 240

Query: 242 NINSTAASQV-VSEHLNTISEN--VVHSENPATRWAVEGTGILLATGLLTVTLACLIAPR 301
           N N+T+ + V +S+ ++   +N  V  +ENPAT+WAVEGTGILLATGLLTVTLA LIAPR
Sbjct: 241 NNNNTSTNSVSISQAVSEQPQNTVVAPAENPATKWAVEGTGILLATGLLTVTLAWLIAPR 300

Query: 302 VGKKTAKSGLHILLGGVCALTVVVFFRF 325
           VGKKTA SGLHILLGG+CALTVVVFFRF
Sbjct: 301 VGKKTASSGLHILLGGICALTVVVFFRF 327

[Close]

BLAST of Lsi01G019950 vs. TAIR10
Match: AT5G08750.3 (AT5G08750.3 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 356.7 bits (914), Expect = 1.6e-98
Identity = 201/334 (60.18%), Postives = 241/334 (72.16%), Query Frame = 1


Query: 4   KENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGA-SCRVCQCIESDRRGDAVLGF 63
           KEN L+  D    ++    I NE+     R+S  K++G  +CRVCQC ESDRRGDA LGF
Sbjct: 10  KENQLETTDCGVSDHGSPPIKNEE-HEAPRYSSDKDTGLPTCRVCQCAESDRRGDAALGF 69

Query: 64  LGITPPIVEARKSDGDSKPEKQSAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC-KAD 123
           LGITPP+ E R+S+          E VD  S + K     SG I+ I P+GEVF+C   D
Sbjct: 70  LGITPPVSEPRRSNAGE-------ETVDQRSSVVKS----SGFIELISPDGEVFVCANDD 129

Query: 124 IEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDDFRK 183
           IEMG+  H D L+ELGCSCK+DLALVHYACALKWFV+HGSTVCEICG   ENIRT DF K
Sbjct: 130 IEMGAWQHRDKLLELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENIRTVDFNK 189

Query: 184 VVSSLKEYEALRERTVSGEANPM---QTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 243
           VV +LK+Y ALRERT  G+ NP+      +S+ IDPDAVAA+RRQRLSEISLWF PH  +
Sbjct: 190 VVIALKDYAALRERTADGDPNPVVVNNNTSSSGIDPDAVAAIRRQRLSEISLWFGPHCST 249

Query: 244 SNINS-------TAASQVVSEH-LNTISENVVHSENPATRWAVEGTGILLATGLLTVTLA 303
           +N NS       TA+SQV SE  +  ++ +++  E+ AT+WAVEGTGILLATGLLTVTLA
Sbjct: 250 NNNNSSNSAAAGTASSQVTSEQPVGIVNFDILPMESRATKWAVEGTGILLATGLLTVTLA 309

Query: 304 CLIAPRVGKKTAKSGLHILLGGVCALTVVVFFRF 325
            LIAPRVGK+TAKSGLHILLGG+CALTVV+FFRF
Sbjct: 310 WLIAPRVGKRTAKSGLHILLGGLCALTVVIFFRF 331

[Close]

BLAST of Lsi01G019950 vs. TAIR10
Match: AT5G63780.1 (AT5G63780.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 349.0 bits (894), Expect = 3.3e-96
Identity = 185/329 (56.23%), Postives = 241/329 (73.25%), Query Frame = 1


Query: 2   MVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGA-SCRVCQCIESDRRGDAVL 61
           M KEN L+  +    ++DC  + NE+L +++R+S   +SG  +CRVC   ESDRRGD  L
Sbjct: 1   MGKENQLETTNCGVNDHDCPPVKNEELAAEARYSTDSDSGLPTCRVCHSAESDRRGDTAL 60

Query: 62  GFLGITPPIVEARKS--DGDSKPEKQSAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC 121
           GFLGITPP+ EARKS  DG +    ++ E+    SV+K + + +SG I+   P+ EVFIC
Sbjct: 61  GFLGITPPVPEARKSNVDGTADDVSKATESELKNSVVKSNGR-ESGFIELTSPDAEVFIC 120

Query: 122 KADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDD 181
             DIEMG   H+DAL+ELGCSCK++LALVHYACALKWF++HGSTVCEICG  AENI+T D
Sbjct: 121 TNDIEMGIQQHQDALLELGCSCKNELALVHYACALKWFLNHGSTVCEICGHPAENIKTAD 180

Query: 182 FRKVVSSLKEYEALRERTVSGEANPMQTIASTD--IDPDAVAAVRRQRLSEISLWFSPHN 241
           F KVV +L++Y A+RERT  G         +TD  ID D VA +RRQRLSEI+ WF PH+
Sbjct: 181 FNKVVIALRDYTAIRERTADGGDQIPVLPVNTDSTIDSDEVAVIRRQRLSEITSWFGPHS 240

Query: 242 Y-SSNINSTAASQVVSEHLNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAP 301
             ++N N+++ + +  + L  ++ +++  EN AT+WAVEGTGILLATGLLTVTL  LIAP
Sbjct: 241 LNNNNNNNSSVAAIPDQPLGVVNFDILPMENRATKWAVEGTGILLATGLLTVTLVWLIAP 300

Query: 302 RVGKKTAKSGLHILLGGVCALTVVVFFRF 325
           RVGKKTA+SGLHILLGG+CALT+V+FFRF
Sbjct: 301 RVGKKTARSGLHILLGGLCALTIVIFFRF 328

[Close]

BLAST of Lsi01G019950 vs. TAIR10
Match: AT2G34200.1 (AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 9.6e-11
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 1


Query: 133 LVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDDFRKVVSSLKEYEAL 192
           L+E+GC CK++L L H+ CA  WF   G++VCEICGC A+N+        V  ++++   
Sbjct: 126 LIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCEICGCTAKNV-------TVRLMEDWSGE 185

Query: 193 RERTVSG 200
           R+ T+ G
Sbjct: 186 RDNTLDG 185

[Close]

BLAST of Lsi01G019950 vs. TAIR10
Match: AT5G05830.1 (AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 35/114 (30.70%), Postives = 56/114 (49.12%), Query Frame = 1


Query: 76  DGDSKPEKQSAENVDGGSVLKKDVKGDSGSIKFIG-------PNGEVFICKADIEMGSCH 135
           DGD +P + S        ++K + +  + S+  +        P   V + +++ +   CH
Sbjct: 24  DGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICH 83

Query: 136 HE-DAL-------VELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENI 175
              DA        +ELGCSCK+DLA  H  CA  WF   G+ +CE+CG +A N+
Sbjct: 84  MSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNV 137

[Close]

BLAST of Lsi01G019950 vs. TAIR10
Match: AT2G37950.1 (AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 36/92 (39.13%), Postives = 44/92 (47.83%), Query Frame = 1


Query: 111 PNGEVFICKADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCV 170
           P  +  IC   +E          +ELGCSCK DLA+ H  CA  WF   G   CEIC  V
Sbjct: 80  PEKDCRICHLGVETSG----GGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSV 139

Query: 171 AENIRTDDFRKVVSSLKEYEALR--ERTVSGE 201
           A N+      ++V S  E   LR  E T +GE
Sbjct: 140 ARNV--GGANEMVGSTMEERELRNGEETAAGE 165

[Close]

BLAST of Lsi01G019950 vs. NCBI nr
Match: gi|659083005|ref|XP_008442138.1| (PREDICTED: uncharacterized protein LOC103486085 isoform X2 [Cucumis melo])

HSP 1 Score: 607.1 bits (1564), Expect = 1.9e-170
Identity = 306/326 (93.87%), Postives = 314/326 (96.32%), Query Frame = 1


Query: 1   MMVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGASCRVCQCIESDRRGDAVL 60
           MMVKENL+QRVDD AKENDCSTIG+EDLGSQSRHSVGKESGASCRVCQC+ESDRRGDAVL
Sbjct: 4   MMVKENLVQRVDDEAKENDCSTIGSEDLGSQSRHSVGKESGASCRVCQCVESDRRGDAVL 63

Query: 61  GFLGITPPIVEARKSDG--DSKPEKQSAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC 120
           GFLGITPPI+EARK DG  DSKP+KQSAENVDGGS+LKKD KGDSGSIKFIGPNGEVFIC
Sbjct: 64  GFLGITPPIMEARKCDGDRDSKPDKQSAENVDGGSMLKKDDKGDSGSIKFIGPNGEVFIC 123

Query: 121 KADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDD 180
           K DIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGC+AENIRTDD
Sbjct: 124 KTDIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRTDD 183

Query: 181 FRKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 240
           FRKVVSSLKEYEALRERTVSG  NPMQT ASTDIDPDAVAAVRRQRLSEISLWFSPHNYS
Sbjct: 184 FRKVVSSLKEYEALRERTVSGVPNPMQTTASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 243

Query: 241 SNINSTAASQVVSEHLNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 300
           SN NSTA SQVVSEHLNTISEN VH+ENPATRWAVEGTGILLATGLLTVTLACLIAPRVG
Sbjct: 244 SNNNSTATSQVVSEHLNTISENFVHAENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 303

Query: 301 KKTAKSGLHILLGGVCALTVVVFFRF 325
           KKTAKSGLHILLGGVCALTVVVFFRF
Sbjct: 304 KKTAKSGLHILLGGVCALTVVVFFRF 329

[Close]

BLAST of Lsi01G019950 vs. NCBI nr
Match: gi|659083003|ref|XP_008442137.1| (PREDICTED: uncharacterized protein LOC103486085 isoform X1 [Cucumis melo])

HSP 1 Score: 607.1 bits (1564), Expect = 1.9e-170
Identity = 306/326 (93.87%), Postives = 314/326 (96.32%), Query Frame = 1


Query: 1   MMVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGASCRVCQCIESDRRGDAVL 60
           MMVKENL+QRVDD AKENDCSTIG+EDLGSQSRHSVGKESGASCRVCQC+ESDRRGDAVL
Sbjct: 4   MMVKENLVQRVDDEAKENDCSTIGSEDLGSQSRHSVGKESGASCRVCQCVESDRRGDAVL 63

Query: 61  GFLGITPPIVEARKSDG--DSKPEKQSAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC 120
           GFLGITPPI+EARK DG  DSKP+KQSAENVDGGS+LKKD KGDSGSIKFIGPNGEVFIC
Sbjct: 64  GFLGITPPIMEARKCDGDRDSKPDKQSAENVDGGSMLKKDDKGDSGSIKFIGPNGEVFIC 123

Query: 121 KADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDD 180
           K DIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGC+AENIRTDD
Sbjct: 124 KTDIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRTDD 183

Query: 181 FRKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 240
           FRKVVSSLKEYEALRERTVSG  NPMQT ASTDIDPDAVAAVRRQRLSEISLWFSPHNYS
Sbjct: 184 FRKVVSSLKEYEALRERTVSGVPNPMQTTASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 243

Query: 241 SNINSTAASQVVSEHLNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 300
           SN NSTA SQVVSEHLNTISEN VH+ENPATRWAVEGTGILLATGLLTVTLACLIAPRVG
Sbjct: 244 SNNNSTATSQVVSEHLNTISENFVHAENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 303

Query: 301 KKTAKSGLHILLGGVCALTVVVFFRF 325
           KKTAKSGLHILLGGVCALTVVVFFRF
Sbjct: 304 KKTAKSGLHILLGGVCALTVVVFFRF 329

[Close]

BLAST of Lsi01G019950 vs. NCBI nr
Match: gi|449457315|ref|XP_004146394.1| (PREDICTED: uncharacterized protein LOC101218157 [Cucumis sativus])

HSP 1 Score: 605.1 bits (1559), Expect = 7.3e-170
Identity = 303/326 (92.94%), Postives = 312/326 (95.71%), Query Frame = 1


Query: 1   MMVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGASCRVCQCIESDRRGDAVL 60
           MMVKEN +QRVDD AK NDCST+G+EDLGSQSRHS+GKESGASCRVCQC+ESDRRGDAVL
Sbjct: 4   MMVKENFVQRVDDEAKANDCSTVGSEDLGSQSRHSIGKESGASCRVCQCVESDRRGDAVL 63

Query: 61  GFLGITPPIVEARKSDG--DSKPEKQSAENVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC 120
           GFLGITPPI+EARK DG  DSKPEKQS ENVDGGS+LKKDVKGDSGSIKFIGPNGEVFIC
Sbjct: 64  GFLGITPPIMEARKCDGDRDSKPEKQSTENVDGGSMLKKDVKGDSGSIKFIGPNGEVFIC 123

Query: 121 KADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDD 180
           K DIEMGSCHHED LVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGC+AENIRTDD
Sbjct: 124 KTDIEMGSCHHEDGLVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRTDD 183

Query: 181 FRKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 240
           FRKVVSSLKEYEALRERTVSG  NPMQT ASTDIDPDAVAAVRRQRLSEISLWFSPHNYS
Sbjct: 184 FRKVVSSLKEYEALRERTVSGVPNPMQTTASTDIDPDAVAAVRRQRLSEISLWFSPHNYS 243

Query: 241 SNINSTAASQVVSEHLNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 300
           SN NSTA SQVVSEHLNTISENVVH+ENPATRWAVEGTGILLATGLLTVTLACLIAPRVG
Sbjct: 244 SNNNSTATSQVVSEHLNTISENVVHAENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 303

Query: 301 KKTAKSGLHILLGGVCALTVVVFFRF 325
           KKTAKSGLHILLGGVCALTVVVFFRF
Sbjct: 304 KKTAKSGLHILLGGVCALTVVVFFRF 329

[Close]

BLAST of Lsi01G019950 vs. NCBI nr
Match: gi|823254567|ref|XP_012459925.1| (PREDICTED: uncharacterized protein LOC105780253 [Gossypium raimondii])

HSP 1 Score: 431.4 bits (1108), Expect = 1.4e-117
Identity = 223/328 (67.99%), Postives = 265/328 (80.79%), Query Frame = 1


Query: 1   MMVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESGA-SCRVCQCIESDRRGDAV 60
           MM KENL Q V+     + CS    +D G+ SR+S+ KE+G  +CRVCQC ESD+RGDA 
Sbjct: 1   MMGKENLPQPVNGGVSNDSCSNADIDDSGTYSRYSLDKEAGLPTCRVCQCSESDKRGDAA 60

Query: 61  LGFLGITPPIVEARKSDGDSKPEKQSAE-NVDGGSVLKKDVKGDSGSIKFIGPNGEVFIC 120
           LGFLGITPP+ EA KS G++KP+ +  + +V+      K ++ +SG ++FI P GEVFIC
Sbjct: 61  LGFLGITPPLAEAVKSKGEAKPDTEGVQQDVESDESHSKSLRRESGFVEFISPEGEVFIC 120

Query: 121 KADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDD 180
             D+EMGSC H+DAL+ELGCSCKSDLALVHYACALKWFVSHGSTVCEICG  A+ IRT D
Sbjct: 121 STDLEMGSCRHQDALIELGCSCKSDLALVHYACALKWFVSHGSTVCEICGNPAKTIRTSD 180

Query: 181 FRKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPH-NY 240
           F+KVV SLK+YEALRERT SG+ NP Q  +S+ +DPDAVAA+RRQRLSEISLWFSPH N 
Sbjct: 181 FKKVVVSLKDYEALRERTASGDPNPAQIHSSSGVDPDAVAAIRRQRLSEISLWFSPHGNN 240

Query: 241 SSNINSTAASQVVSEH-LNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPR 300
           ++N +S+A SQVVSE   NT++E V  SE+PAT+WAVEGTGILLATGLLTVTLA LIAPR
Sbjct: 241 NNNHSSSAVSQVVSEQPTNTVTEEVTPSESPATKWAVEGTGILLATGLLTVTLAWLIAPR 300

Query: 301 VGKKTAKSGLHILLGGVCALTVVVFFRF 325
           VGKKTAKSGLHILLGG+CALTVVVFFRF
Sbjct: 301 VGKKTAKSGLHILLGGICALTVVVFFRF 328

[Close]

BLAST of Lsi01G019950 vs. NCBI nr
Match: gi|590709390|ref|XP_007048540.1| (RING/FYVE/PHD zinc finger superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 417.9 bits (1073), Expect = 1.7e-113
Identity = 218/327 (66.67%), Postives = 258/327 (78.90%), Query Frame = 1


Query: 2   MVKENLLQRVDDNAKENDCSTIGNEDLGSQSRHSVGKESG-ASCRVCQCIESDRRGDAVL 61
           M KE L   V+     + C    ++D G+ S+ S  KE+G A+CRVC C+ESD+RGDA L
Sbjct: 1   MSKECLPHAVNGGVSNDSCPNADSDDSGTYSQCSRDKEAGLATCRVCHCVESDKRGDAAL 60

Query: 62  GFLGITPPIVEARKSDGDSKPEKQSA-ENVDGGSVLKKDVKGDSGSIKFIGPNGEVFICK 121
           GFLGITPP+ EA KS+ ++KP      ++V+      K V  +SG ++FI P GEVFIC 
Sbjct: 61  GFLGITPPLPEAVKSNAEAKPNSNGIPKDVESDFSHAKSVGRESGFVEFISPEGEVFICS 120

Query: 122 ADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCVAENIRTDDF 181
            D+E+GSCHH DAL+ELGCSCK+DLALVHYACALKWFVSHGSTVCEICG  A+NIRT DF
Sbjct: 121 TDLEIGSCHHHDALIELGCSCKNDLALVHYACALKWFVSHGSTVCEICGNPAKNIRTSDF 180

Query: 182 RKVVSSLKEYEALRERTVSGEANPMQTIASTDIDPDAVAAVRRQRLSEISLWFSPHNYSS 241
           +KVV SLK+YEALRERT SG+ NP Q   S+ +DPDAVAA+RRQRLSEISLWFSPH+ ++
Sbjct: 181 KKVVVSLKDYEALRERTASGDPNPAQVHTSSGVDPDAVAAIRRQRLSEISLWFSPHSNNN 240

Query: 242 NINSTAA-SQVVSEH-LNTISENVVHSENPATRWAVEGTGILLATGLLTVTLACLIAPRV 301
           N NS+AA SQ VSE  LNT +E V  +ENPAT+WAVEGTGILLATGLLTVTLA LIAPRV
Sbjct: 241 NNNSSAAVSQAVSEQPLNTFTEEVAPTENPATKWAVEGTGILLATGLLTVTLAWLIAPRV 300

Query: 302 GKKTAKSGLHILLGGVCALTVVVFFRF 325
           GKKTA+SGLHILLGG+CALTVVVFFRF
Sbjct: 301 GKKTARSGLHILLGGICALTVVVFFRF 327

The following BLAST results are available for this feature:

BLAST of Lsi01G019950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G019950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2THY9_GOSRA	1.0e-117	67.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G037300 PE=4 SV=1	[more]
A0A061DK17_THECC	1.2e-113	66.67	RING/FYVE/PHD zinc finger superfamily protein isoform 1 OS=Theobroma cacao GN=TC...	[more]
F6H4F1_VITVI	4.9e-112	66.16	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02640 PE=4 SV=...	[more]
W9QSZ8_9ROSA	8.6e-109	66.56	Uncharacterized protein OS=Morus notabilis GN=L484_007915 PE=4 SV=1	[more]
M5WFU4_PRUPE	1.6e-107	64.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007509mg PE=4 SV=1	[more]

BLAST of Lsi01G019950 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08750.3	1.6e-98	60.18	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G63780.1	3.3e-96	56.23	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	9.6e-11	40.30	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G05830.1	1.8e-09	30.70	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	1.8e-09	39.13	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of Lsi01G019950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659083005\|ref\|XP_008442138.1\|	1.9e-170	93.87	PREDICTED: uncharacterized protein LOC103486085 isoform X2 [Cucumis melo]	[more]
gi\|659083003\|ref\|XP_008442137.1\|	1.9e-170	93.87	PREDICTED: uncharacterized protein LOC103486085 isoform X1 [Cucumis melo]	[more]
gi\|449457315\|ref\|XP_004146394.1\|	7.3e-170	92.94	PREDICTED: uncharacterized protein LOC101218157 [Cucumis sativus]	[more]
gi\|823254567\|ref\|XP_012459925.1\|	1.4e-117	67.99	PREDICTED: uncharacterized protein LOC105780253 [Gossypium raimondii]	[more]
gi\|590709390\|ref\|XP_007048540.1\|	1.7e-113	66.67	RING/FYVE/PHD zinc finger superfamily protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G019950.1	Lsi01G019950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 130..167 score: 1.
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 127..168 score: 2.
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 110..174 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 127..168 score: 1.
None	No IPR available	PANTHER	PTHR23012:SF66	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 273..324 score: 3.5E-81coord: 126..191 score: 3.5E-81coord: 16..52 score: 3.5
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 131..170 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G019950	CSPI04G20020	Wild cucumber (PI 183967)	cpilsiB250
Lsi01G019950	Cucsa.353850	Cucumber (Gy14) v1	cgylsiB572
Lsi01G019950	CmaCh07G012640	Cucurbita maxima (Rimu)	cmalsiB792
Lsi01G019950	CmoCh03G000350	Cucurbita moschata (Rifu)	cmolsiB589
Lsi01G019950	CmoCh07G013030	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G019950	Cla011661	Watermelon (97103) v1	lsiwmB146
Lsi01G019950	MELO3C008933	Melon (DHL92) v3.5.1	lsimeB152
Lsi01G019950	ClCG04G002030	Watermelon (Charleston Gray)	lsiwcgB135
Lsi01G019950	MELO3C008933.2	Melon (DHL92) v3.6.1	lsimedB159
Lsi01G019950	Cla97C04G069690	Watermelon (97103) v2	lsiwmbB133
Lsi01G019950	Cp4.1LG19g01240	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G019950	CsGy4G019060	Cucumber (Gy14) v2	cgyblsiB243
Lsi01G019950	Carg12690	Silver-seed gourd	carlsiB259
Lsi01G019950	CsaV3_4G030700	Cucumber (Chinese Long) v3	cuclsiB279

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G019950	Cucurbita pepo (Zucchini)	cpelsiB399
Lsi01G019950	Cucumber (Chinese Long) v2	culsiB250
Lsi01G019950	Silver-seed gourd	carlsiB260
Lsi01G019950	Silver-seed gourd	carlsiB430
Lsi01G019950	Watermelon (97103) v2	lsiwmbB136
Lsi01G019950	Wax gourd	lsiwgoB173