Lsi01G019860 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G019860
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	NADH dehydrogenase, putative
Location	chr01 : 26429090 .. 26440567 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTAGTTGCAGGTGCGTCAAGGCAATCTGGAAAACTTTTTCCAGGTTCTTCAAGAAGACTTGGAACCAATTTATGTCGGTTCTCTAGTTCTCGAGGTAAGGGGATAAGATGTGCTATTCCGAGTTCATCAAAGAACAATGGAGGCATTACAGAGATATCTGAAAGTGAATTGGCTAAGCATTTCTATGCCTGGCCAGATTACAAGGTCAGTGTTCAGTGGTCTAGATATATAAAGCAATCTTGCTTGTTTATTCTGAAAGTGTTGAACTTGAGTTGGTGCAACTTCTTCTATATTTGCATTATTTCACGTAAGATATCAGCCCATGTCAATAATATGCTCTGCTGTAATAGCGTATTATTCAAGAATTTTTTTCTTTCAGCCATTTGACTATCTCAGAATCCAAGCAAATAAAAGTCAGGCCAACTGTTTGTGAGATCATACTAGTTCATTTATGCGGACAAAAAAAGTATATATTTATTAAGAGTTACCTAAAGTGGATTTGTTTTTGTCAGAGTAATTTGACCGGGATTAGTTATTTATTTGTAATTACTCCTTATTCGAAGTTTATTTGGTATTTACTAGCTTAGTTGTTAAGTTTGATCTATTATAAATAATATGTGTTGCACAGTAAAATTCATGTGATTTGTTAAATGTGATAAACATAACTTTTTTTTTTTGGTAAGATAAAGGGGACCGGTATGGTGCTAGGCACGAGTCAAAGTAATTAGGTTTTTTTTTCTTTGGTAAGAAACTGAGCCTTCATTGAGAACTATGGAAGAATACATAAGGGCATAACAATATACAAGCTCAACACAAAAAGGGATTCCTATAAATAGCTACAAAAAAGACTCCAATCCTTATCCAACATAATCAAACCATGCCATAATTACATTTACAAAAAGGTCTAGTGGCTAATGCCTACAAGGAAGCATTAAACCCTGCCACCTCCCACACCTCGTTTCACGTCCTCTCCACCTCAAGAATTAGGTTAGGATATACAAAAGGCTTGGATATACAAAAGGACCCCATCAAAGGGTATACAAAAGATGCTTCCAATTTGAAATAAGAAAAGAGAAACTATAACTCTTAATAGTCTGTATATCTTTACAACAAAAAAGGGCATAAGTAATGGCTAACTCTAAAACCCCCTTGGATGATTTGATGATGTCTTGAAAAATCCTAGCATTTCTTTGTTCCCAAACCTTCCACAAAATTACTGAGATGATACTGTTCTAGCTACGTTCTTTGTCAGCTTTGAAAGGATGGCCAATAAACAATGATTTAAACCAACCGGGAGAGTCATTAGGGATTACCGGAGACCAATGAAAAACTTGAGTGACTTCTAACTAAATATTGGCCACAAAAAGGCAAATGATGAATAAATGGCAGTGTAATTCATGGCTTTTCTTTGACATAAGCAGCACCACGATGGAGAGAGACAACTCCAAGGACAACATTTTTGAAGCCTATCCATAGTGTTGAGACATGAATGTGTAATCTCCCATAGAAGGAACTTGATTCTTATAGGGCCTTTAATCTTCCAAACTCACTTGAAAATGTCCTGTGAGCTCGAAGGTTGAACCGCAAGGAGGTGTGAATATATCAATTTAGTTGAGATAAAGAAGAGAAGAATGGTAGGCTTACATTATGGCTTATCAAAGAAACAAGGGCTTAAGAGATTGGGGAGGTTATCAAAGAAGATCCTGATGTAGCTTTAGAATTGGCTGCACTTTCAATTTTGACGGATTCTCTGATAAAAAAATCAAGATTTAATTACAAAGCAAGAGAAAGGGAGATGTAGACGATGAATAGGCACAGGGAAAGAATTAGGTCAAAGCCTTGTTACGGTAAAGTGTAAACTAATGTCTCTATATATGTACACATAAAAAAATCAAAGACTAATGGTACATACGTGGAAGAAAATCACTGGAGAGCAAATGGCAGAACATTATGCAGGAAGATAATCATTCATTGTGCCCAACGTTATTGCATCTGAAATGTGCATTTATGGCATTTTTTCCTTTAGAAGTATTTTCAAAAGATTTGTGTAATATCTTTTTGTGCTGTATGGAAATTCTTTAAATTGAATGTCAAGTGGATCAAGCCAAGGTGCTCCATTGTAATCTAATCCTGCATTCACAGAAACCAAGAGTATGCATTCTCGGTGGAGGGTTTGGAGGATTGTATACTGCTCTGAGACTTGAATCTCTTTTCTGGCCAGATAATAAGAAACCTCAGGTAATTTTCGTTTTCTTTTGTTTCTCTTCAAAAGTTGTTTTCAAGACCAATGTCATGGTACATACAGGTCATATTAGATTCTACCATGTCCTATCTCTCCATGTCTCACTTACGTTTTCCCTTTCCAATAAGTCAAACAGGTTGTGAAATGTGAGCAATGAGAAAGTGCAATATATACAGAAACTAATTGATTTTTCCCTTTTCTAGCTTCTTTAATATACTGTTTTTTTTTCCCCCTAAAAAAATAGAACTTTTCATTGATCTAATGGCCGGATTACAATGAAACTGAAATAAGAGTAGAAAAATTGAGAATACAAGATAAGCATCCGAAAATGTTAACTTGCACCGGATCATTAGTATAGAGCTTGAAGAGAGAACAATAAGAGGAATCAAAAAGCCTTGCAACTTCACAACGCTCTTGCGGTGTGAGAGAATTGTTGTGAAAGATCTTTTGGTTTCTTTCAAACCAAATTTCAGGAAGCAAGACTTTAACCGCATTTGACCAAATCAAAATTGATTGAGGCTTGATTGACAGACCCACTAGGATTTGAACAACATTATCCTTGAAGGACTTACCAAAGACTTACTGGATATGAAATATAGACAACAACTTCTTCCAACAAGTCATAGAGAAACGGCAGCCAAAAACAAATGATTAAGCTCCTCACTTGCAGCATGGCAAAGAGGACCAATTGATGAAGATAAATAATGTAGTGGAAGCTTCCTTTGAAGAGTTGAGGCACAATTTAATGTTCCAAAAATCATTGCCAAAATAAGAATATTAATTCTTTTGGACTAATGGTCTTCCACAAATCCCTAAAGACTTCATTTTCTCTATCATTCGAAGCAGTCAAGAAAATGGATAAGGATCTAACCGAAAAACTTCAAGAGGCATCAAACATCCAGCTGCGAGAATCACCGCTATGCTCCACTTTCTTCTCCAAAAAAGCATGAAGAACCTTGTAATGTTGAAGGCTCTACCAATGCACCAAGGGCCTTCACAATTACCGGCCATAGGAATCTTCTTTCGTTATAATTACAAGGACCATAAGTTATTGAAATCCAGCAAGATCTCATGCTTTGAGATAAAAACTTTATTGATAAGAAATAGCCCCCTTTGAGTGTTTCTTGAACTGACAGCTTATTCACAACTCACATGATCAAAATGTCACAGATTTTGTAAGACTCTTAGTTAGGGAAATAATAGGATTATTAGTAGCATATTAGTATGGTTATTAGAAGGAGCATATTAGTAATTAGATAGTAAGTTGGTTAGGGCATTTAGTTATAAATAGAGGGATTGGGTTGAAAGTAAGGGTGTGAAGCATTTGTGTGGAATTTCTTGTGGAAATATTGGGAGAGACTAGCCCTCTCGAAAGGCTATATTATATTGTACTTTCTTTATTGATTATTGCAATATAAATCTATCTTTTAGTGTTATTTGTTTGTCCTTTGTGTGCTTGAGTGTTCTTGAGTGTAGTTGCTCTTATACCAATTTGTTAGGATACCTCCTAACAAGAACACAAAGGACAAACAAAGAACACTAAAAGATAGATTTATTTGCAATATCAATAAAGAAACTACAATATAACATAGCCTTTCGAGAGGGCTAGTCTCCCAATATTTCCCATAGGAAATCCCACACAAATGCTTCACACCCTTACTCTCAACCCAATCCCTCTGTTTATAACTAAATGCCCTAACCAACTTACTATCTAATTACTAATATGCCCCTTCTAATAACCATACTAATATTCTACTAATAATCCTATTATTTTCCTGACTAGGGCTCTTACAGATTTCCAAGAGAATCCACAAAATACCAGCCTACATCTTTAGAGCTCAAATTGATTTGATGAGAAATCCATCGACTTCCTCTTTTTTTGTTTAGTGAATTAACCACACCAGGATGATGAGATTGAAGGAATCTTTTCAAGACAATTTGCTTTGATCTAACTCCAAGGCCCCTTATGTTCCAAATAATAACCTTCATAGCAACTTTTGACTAAGTGAAGCTTCCATTAGACGAAGGGATTTCCCTTGGACCAGAATCACTAATGAATTTATATTCACTTTGTCATTCACCAAATGGGGATCTTTCATGAACCCAACTCATAATATTGAAGTCTCCACTTATGCACCAAGGTTTCCTTCAATACAATAGGATGAAAGTGAAATATACTGTTTTTGTTGTTGAAATATTTTTTACTAGAAAACACAGATTATTGTTGTTGTTGTTATTATTATTATTATTATTATTATTATTATTTAACGGAAACAACACTTTTCATTGATGAAATGGAAAGAGACTAATGCTCGAATTACAATGAGATATGACTAGAAAGAAAACATGAATTCAAAAAGACAAAGGAATCAACAGGCGCACCTAGATATCTCAACTAGGTTGACACACTCATAGCGCCCTCATCACATCCCAATAGAAAAAACTACTAATAAAATGTATTACAATATGACATAATGTCTTAACAATACAAGAATGAGATCAAAACTAGACCAAAACATCACCAAGCCAATCTAAAAAGATTAAGGGGAAATAAACGCATTCCAATTTAAGCTAATATCTTGTCGAGTAGTCTGCAAATAATCTGGATAAAGAACACCAAGAGGAAGCTTTGACTCGTGCAATCTCATAGCACTCCAACCAAGAAAGGGCCTTGTTCTAAAAAATTCTTTGGTTCCTTTCAAACCAAATTTCTGAGAGGATCGCTTTGACTCCATTTACCTAAAGAAGGTGGGGAATAGCTTTAAAACAAGGCCACACTAAAATCTGCATAACATTCTCCTCGAAGGAATTAACACCAAACCCACTGCACATTAAAGAAAGCGAAAAACTTCATCTAATTTCACAAGATTTCTGGGCAGCTAAGCTGAAATTATCCCATACAACCTTTACACTTTCTTAAATTAATGAATGATTTCTAATAATTTTAGCTGCATAAATATTTCTAAGGCAGGATGCGTAGTATGAACCATAGTTCGGGTAGTGAAGATGTTGGGAACAATCAAGGATTATCCCTTTTTCCTTGCAACGTGTAGTATTGATATCTTAGAAACATTATCTTAGCACTGGTTTCAAGAACAATAGCTCAAGCAGTTTGTCATGTTTAGACTGAAGTGCGCACAAATATACTCTCTTTTTACTTGCTGAATCTGCAGAAGAATTTTTTTTTTTACCCTTTTAAAGATGTTTTGTTTTTCTCTTTTTCTGCGAAATAGGGAAGGAGAATTATTGTCTTTTCTCTTCCCTTGAATTCTTATTTATATGGTTCATGATTTCTATATTGTGGAAGCTCACGGTTTCAAACAATCATTTTCTTCACTTTTGAAATTAGTAAAGAGTGTTTTTTTACTATTCTTATTGGCACTTTATATTCAGTATCCACCCCCTCCCAAAGAAAAAGAAGGATTGTGGAAAATAAATTTTTGTCTAGGAAGTCTTTTTTTTATTTTTTTTTATTTTTTTATCGGATCTTTTCATTAATGAAGAAAAGGGCATAAAATAACATAATTAACAGATTACAAAATGTAGACCTATAAGACAAAAGAAAAAAGAAACAAAAGATAAAAAGGGAGAATACAACCAAAAAGTCCAAATGCAGCCCTGAAAATAGAATTAAGGAGAAATAAATGCAGCCCAATTCAAATTAATATCTTGAAGAGAAAATCCCCTGAAAAGCTTGGAATGGGAACACCAGAGAGAGGCCTTCAAGTGAGCTATTTCAAAACAATCAATCCATCAACGATGCTTGCTTTCAAAAACTATTTGATTTTTGTCGAACCATAACTCTGAGATAATAGCCTTAACAGCATGATCCATAATAAAAGAGGACGAGGAGGGAGACAAGGGCCAATTGGCAGCTGCAGCAAATTGTACTGATTTATTTGAGAAAACCTAAGAATGTTGAAGCTTCCAAAAAAATGATGCCAGCAAGAGAGGGCATAGGAACCATAAAATAGTAAGTGATTTAAACTTTTCGAACTTGAGCCACATAATGAACAAATTGAGGGCATGAGGCCATAGAAGGAAGCTTTCTTTGCAGGACATCTGTAGAATTTAAACTACTATTTATCGCAATCCACATAAGAATGTTGTTAGTCTTCTTTGCACAATTTGATTCCCATAATGCAGCGTCTGGGAAGTAATTTCAAGTTACTAGAGGTTAATGATCTGCAGTTTTGATATCGTCTTTAATCTTATTGGATTGGAACCAGGTGCTTCTTGTTGACCAGTCTGAACATTTTGTTTTCAAGCCAATGCTGTATGAACTTCTATCTGGAGGTCTGTCTTTTGATTTATTTTATAATAGAATTTACTACATTTTAACAGAACGTCCTTTACTCAATCTTATTTAAAATATATTGTTTCATCAAGTGTAGAAGTAGATGCATGGGAAATTGCGCCTCGTTTTTCTGATCTGCTGGCAAATACTAGCATCCAGTTTGTTCAGGACAAAGTGAAACTCTTGGACCCCTGTGATCATTATGATGCAAAAAATCCTAGTTGTAGTGGAACTGTGTATCTTGAAAGTGGCCTCCATATTGAATATGATTGGTATTTCTTTAGCTTTCTATCGGTCATCATATATTCGATAAGTTAAACTTCATTTGATAACCATTTGGTTTTTGGTTTTTGAATATTGTGCTTCTTTTCTCGTTATTTCATTACAATGATTTTCATCTTTTCAATGGAAATATTTGACTTCTTAGCCAAATTTCAAAAACAAAAACAAGTTTTTAGAAACAGCCTAATTTATAAACTAACTTTCAAAACTAAAAACTAAAAATCTATTGGTTATCAAATAGGCCCTTTTCCCCCTCTGGTTGTTGCTGGCATTGAAAGATAGTCTCAACATTTTTCTATTATGGATCTTGGACAGTCAGGCTGGTTCTTGCCTTGGGCGCTGAAGCTAAGCTTGATCTTGTACCAGGGGCTGCCGAATATGCTTTACCTTTCTCTACTCTTTGGGATGCACAAGTGAGTTTACCAAAAGAATTCCTCAGCTAAGTTGCAATCACTTGTACTGAAGCGAGTTGTTGAGTTGTATGTTTTTTGGTATTCCTTGTTTTACAGAGGGTTGACAGCCGGTTAAAAACCCTGGAGAGGATTAACTTTAATAAGAAATCCTTGATTCGGGTGGCTGTTGTTGGTTGTGGTTACTCTGGCGTTGAGTTAGCTGCCACAATATCTGAGAGACTGCAAGACAGAGGGTTGGTGCAAGCTATTAATGTGGAAACCATGATCTGCCCTACCGCCTCACCAGGGAATAGAGAGGCCGCACTTAAAGTATGCTATTGAACTTGTGATACGACAAATTATTAATTAATTGCTTCAATGATTTCTAGAATGGCCAATGATTGTGTTGAAAAAATTTTATTTTACATTTGCAGTTTAAGCTCGTGAATTTCAATAATAATTGAGTTTTTGAAAGATTCTGGTTCAATTCAATGATAATTGTGTTCTTTAGAGTATTCTGTTTGAAAGAATCTGGTTTTAGCATTCTATTTTGTGTTGAGAAATCAGTAATTTTGAAAGGCCGTGTAGTCTTTAAAAATCCCTTAGATATCATTCAAGGTTAAGTTGTTAGCATTCTATTTTGTGTTGAGAAATTATTATGGAAATTCACGAGCTTAAACTGCAAATGTAAAATAAAATTTTCTCAACACAATCATTGGCCATTCTAGAAATCATTTTTATATTGTTAGTTAATAATAAGAACTCATTATTTTATTTAAGCTATTTCATTGTATCGTGTTTGTTTGATTGATATCCAAGAAAACAATGACTTGGAGAAAGAGAATACAATCTAAAGCAAATAACAGCCTTTTAATGCTTTCTGAAATTCTTTGAACTCGATGCTGGCAAACATATATGAAGAATTTTATTTTCAATTTTAGTGAAAACAGAGTACTGCCATCAGATAAAAGACCTAATAGGTCTTTAGATGTTATATCTTTTGTATGCTTCAAACTAGTCCAAATTGTTTATTCCCTATGCTGTTATCCTTCCTCTGGAAGCATATTGGTACCTATATTCATATTTGTGATAATCTTTATACAAATTAAATACCATCTTGCTATACATGTTAGGTTCTACAATCTCGCAATGTTGAACTTCTCCTAGGTTACATCGTCCGCAGTATCCAGAGAGTGGACGATGCAGAAACATCTGAAAAGCCAAATGACAACAGACCAAGCCAAGGCACTCATTCAGATCTTGCTTTAAGTAGGTATAGATTGGAACTTCAGCCTGCCGAAAGAGGATCCCAAGGTCGCACCCTGGAAGCAGATTTAGTATTATGGACTGTTGGATCAAAGTCTCTTCTTCCAACATTGGAACCTTCTGAAAATTACCACAAACAACTTCCTCTGAATGCTCGGGGTCAAGCTGAAACCGACGAAACTCTTCGTGTTAAGGGTCATCCACGGATATTTGCACTCGGTGACTCATCTGCCTTGAGAGATTCAAATGGACGACTTCTTCCTGCCACGGCACAGGTATGAAATTGATGTATCTTCTCTGTTTTTATTTGATTTCAGTCTTTTATTATTTGGTTATCTTTAATTAACCAGTTAGTTAATTAGTTAGCTGTAGGTTGTATTCCTTGCCTATAAAAAGAGGCTGGATCTCTTCTTTTGGAGACAACTTGAAGACTGATTCTTAAAATCTCTTTGGTGTGTACACCAGAAATGCAATCATCATCTGAGGCATTAAACTAGGATGCTCATTTTTTCTTCTGCATAATCTGTATTCTTGAGAATATTACATGTAGACATACTATTCTTGAGGGGACGAAAAAATATATATTTGTCTCACTTTTTATTGTACAATTGACAAACTAATAAGAACGGCTCTGAATTTACTTTTAACGTCCAACACCTAAGAAGCACAGACACTTTAGTTTGGCTAACGTGTCCGTGTCCGACACGTGTCCGTGTCCGACACTTGGACACTCCGACACTTGTTGGACACATATCGGACACTTGTTAGTGCAACAAATGTGTTAGACATGCATTGAACACTTGTTGAGTAGACCAAAAAGACACATATATGACAATAATACTAACTTTTGAGTGTGAAATACATCAAGCTAAGTCTTTTAAGCATATAAATGCATCAACCCATTTACTTTTAATTTTATTTTGGTATGAGGATGATATATATTTTAAAAAATGTATATTTTAGTAAACGTGCCATTGCCGTGTCGTGTCCTAGGTATTTAAAATATGGCGTGTCGCCGTATCCGTGTCGTGTTGTATCCGTGTCTCGTATCCGTGTCCGTGCTTCTTAGTCCAACACCAATGCAGTATAATATAAATTTGTTTATGTGCACGCACAATTACAAGAGAGAACATTTACGAGAAAAAATTGAAGAAATATTAGAGAGTACGGGTAGATGAGTAGTAGGAGTTTGTTTAAGTGTTAGTAGAGAGAAGCTAGTTTGAACCAATACAACAACACATGTTTATCAAATATCAAGACAAAGCCTCCACAGCATTTTCTTCAATTTTCTCTACTCTACATTTGCCTTTTATTTTATGTTATTTCTCTAAAGACACTCTCTTCAAAGTTAAAAGATATTCTTCTCGTTCTCCAAGCAGGTTGCTTTCCAGCAAGCAGACTTCGCTGGTTGGAATCTCTGGGCTGCTATCAACAACCGTCCTCTTTTGCCCTTTAGGTTTGAAATTTCAGTGTCTTGATACCAAATTAGCTTTTCTCAACTTTCATGGACATATTTTCTTTCCCGATACACGGCTTTTGAAGTGTTTATTGGAGAACTAAGTACTTGTTTGGAATGACTTTTCAAGTGAAAGTTACAAATCAGTCTTAAAAGTGTTCTTTTAAAATTTATATGGTTAAAACTTTAAAGAGCAGTAAAATAAGTGCTTGTATTTAACTAAAATCACTTCTTACAAGTGTTTGCCGATCAAAAGTAGTTTGAAAAATTTTAAATAGGGATAAGTAATAGTTAATGTGCTTTTAGATCAAGCTAGAAAAGTTGTTGATTCCACTCTGAGGAATTTCTGTAATTTGTATATTTGAGTTGCAGATATCAGAATTTAGGAGAGATGATGACTTTGGGTAGAAATGACGCTTCAATTTCTCCAAGTTTCATCGAAGGTTTGACCTTGGAAGGTCCAATCGGTCATGCAGGTATATATTATCTCTTTTATGTTGTGAGTTTGATAATTCATTAATGAGCCAATAAGGCTTACTTATAGGATACACACAGGTTATTTTTTATTAGCAGAATAACAAACTTAAAAAACAACCCATAAATATAGACTAATATTCTAACAACTTATATACATAATTCCATAGACCTCTTATCATGATGTTATAGTAAAAACTACTTTTAAAAAATCCTTAGCACAAGCATTTTAATTATAAATGCTCTAATATACCATATTTAATAATACATCACTTTCATATTTAGTTCAATACTCTTAAAAGTGTTATGTACTCAAATTGATGTGTTTTTAAATATTTTTAAGGTAACTCTTACCTTATTTTAATTTAAGGTTAGAAAACACTTTTAAGATAACAATTTAGTTTCTATACTTTGAAATTTGTCGTGAAAAATCTCATCAAAACTAAGTGTCAATAGATAAGGTTTATAAGGCGTAATTATAGGATACAAACAAGTTAATTATAATTAGCTATAGGTAAGGAATAATATTACAAAACTTAAAACAACCCCTAAATATAGATTGATATCCTAACAAAGGATATTTTTATAATTATTATTTAATTAATATTATGGTATTTTTATGGCAGCAAGAAAAATAGCGTACTTGATAAGACTACCAACGGATGAGCATAGGGTTAAAGTAGGGATCAGTTGGCTCACAAAGTCTGCAGTTGATTCCATCGCATCAATTCAAACCACTTTAACGAGTGTATTCACTGCTCAATGAACCATTCTCTTTATAATATGATCTGGGAGAGAAAAAAAAAAAAAAGTGTATCTACATTTATTAGGGTTTGCTATGAACATGAAAATTTTAACATTTGATGATCTATAGGCAAAGTTATCAGTGGTATCTTAATTAAAGTCAGTTGAGTTTTCTATAATCTAAGAGAAATGTTTATGAAATATGAAAAGAAAATATTAATGAAGTGTTGCTAATATGAATTATGAACATAAATGCTAAAGTTGTGGATTTTTAACTTACTTAGAAATTAGAAAGTGCAAAATATATTTATTTGAGTGT

mRNA sequence

ATGGCTGTAGTTGCAGGTGCGTCAAGGCAATCTGGAAAACTTTTTCCAGGTTCTTCAAGAAGACTTGGAACCAATTTATGTCGGTTCTCTAGTTCTCGAGGTAAGGGGATAAGATGTGCTATTCCGAGTTCATCAAAGAACAATGGAGGCATTACAGAGATATCTGAAAGTGAATTGGCTAAGCATTTCTATGCCTGGCCAGATTACAAGAAACCAAGAGTATGCATTCTCGGTGGAGGGTTTGGAGGATTGTATACTGCTCTGAGACTTGAATCTCTTTTCTGGCCAGATAATAAGAAACCTCAGGTGCTTCTTGTTGACCAGTCTGAACATTTTGTTTTCAAGCCAATGCTGTATGAACTTCTATCTGGAGAAGTAGATGCATGGGAAATTGCGCCTCGTTTTTCTGATCTGCTGGCAAATACTAGCATCCAGTTTGTTCAGGACAAAGTGAAACTCTTGGACCCCTGTGATCATTATGATGCAAAAAATCCTAGTTGTAGTGGAACTGTGTATCTTGAAATCAGGCTGGTTCTTGCCTTGGGCGCTGAAGCTAAGCTTGATCTTGTACCAGGGGCTGCCGAATATGCTTTACCTTTCTCTACTCTTTGGGATGCACAAAGGGTTGACAGCCGGTTAAAAACCCTGGAGAGGATTAACTTTAATAAGAAATCCTTGATTCGGGTGGCTGTTGTTGGTTGTGGTTACTCTGGCGTTGAGTTAGCTGCCACAATATCTGAGAGACTGCAAGACAGAGGGTTGGTGCAAGCTATTAATGTGGAAACCATGATCTGCCCTACCGCCTCACCAGGGAATAGAGAGGCCGCACTTAAAGTTCTACAATCTCGCAATGTTGAACTTCTCCTAGGTTACATCGTCCGCAGTATCCAGAGAGTGGACGATGCAGAAACATCTGAAAAGCCAAATGACAACAGACCAAGCCAAGGCACTCATTCAGATCTTGCTTTAAGTAGGTATAGATTGGAACTTCAGCCTGCCGAAAGAGGATCCCAAGGTCGCACCCTGGAAGCAGATTTAGTATTATGGACTGTTGGATCAAAGTCTCTTCTTCCAACATTGGAACCTTCTGAAAATTACCACAAACAACTTCCTCTGAATGCTCGGGGTCAAGCTGAAACCGACGAAACTCTTCGTGTTAAGGGTCATCCACGGATATTTGCACTCGCAAGAAAAATAGCGTACTTGATAAGACTACCAACGGATGAGCATAGGGTTAAAGTAGGGATCAGTTGGCTCACAAAGTCTGCAGTTGATTCCATCGCATCAATTCAAACCACTTTAACGAGTGTATTCACTGCTCAATGAACCATTCTCTTTATAATATGATCTGGGAGAGAAAAAAAAAAAAAAGTGTATCTACATTTATTAGGGTTTGCTATGAACATGAAAATTTTAACATTTGATGATCTATAGGCAAAGTTATCAGTGGTATCTTAATTAAAGTCAGTTGAGTTTTCTATAATCTAAGAGAAATGTTTATGAAATATGAAAAGAAAATATTAATGAAGTGTTGCTAATATGAATTATGAACATAAATGCTAAAGTTGTGGATTTTTAACTTACTTAGAAATTAGAAAGTGCAAAATATATTTATTTGAGTGT

Coding sequence (CDS)

ATGGCTGTAGTTGCAGGTGCGTCAAGGCAATCTGGAAAACTTTTTCCAGGTTCTTCAAGAAGACTTGGAACCAATTTATGTCGGTTCTCTAGTTCTCGAGGTAAGGGGATAAGATGTGCTATTCCGAGTTCATCAAAGAACAATGGAGGCATTACAGAGATATCTGAAAGTGAATTGGCTAAGCATTTCTATGCCTGGCCAGATTACAAGAAACCAAGAGTATGCATTCTCGGTGGAGGGTTTGGAGGATTGTATACTGCTCTGAGACTTGAATCTCTTTTCTGGCCAGATAATAAGAAACCTCAGGTGCTTCTTGTTGACCAGTCTGAACATTTTGTTTTCAAGCCAATGCTGTATGAACTTCTATCTGGAGAAGTAGATGCATGGGAAATTGCGCCTCGTTTTTCTGATCTGCTGGCAAATACTAGCATCCAGTTTGTTCAGGACAAAGTGAAACTCTTGGACCCCTGTGATCATTATGATGCAAAAAATCCTAGTTGTAGTGGAACTGTGTATCTTGAAATCAGGCTGGTTCTTGCCTTGGGCGCTGAAGCTAAGCTTGATCTTGTACCAGGGGCTGCCGAATATGCTTTACCTTTCTCTACTCTTTGGGATGCACAAAGGGTTGACAGCCGGTTAAAAACCCTGGAGAGGATTAACTTTAATAAGAAATCCTTGATTCGGGTGGCTGTTGTTGGTTGTGGTTACTCTGGCGTTGAGTTAGCTGCCACAATATCTGAGAGACTGCAAGACAGAGGGTTGGTGCAAGCTATTAATGTGGAAACCATGATCTGCCCTACCGCCTCACCAGGGAATAGAGAGGCCGCACTTAAAGTTCTACAATCTCGCAATGTTGAACTTCTCCTAGGTTACATCGTCCGCAGTATCCAGAGAGTGGACGATGCAGAAACATCTGAAAAGCCAAATGACAACAGACCAAGCCAAGGCACTCATTCAGATCTTGCTTTAAGTAGGTATAGATTGGAACTTCAGCCTGCCGAAAGAGGATCCCAAGGTCGCACCCTGGAAGCAGATTTAGTATTATGGACTGTTGGATCAAAGTCTCTTCTTCCAACATTGGAACCTTCTGAAAATTACCACAAACAACTTCCTCTGAATGCTCGGGGTCAAGCTGAAACCGACGAAACTCTTCGTGTTAAGGGTCATCCACGGATATTTGCACTCGCAAGAAAAATAGCGTACTTGATAAGACTACCAACGGATGAGCATAGGGTTAAAGTAGGGATCAGTTGGCTCACAAAGTCTGCAGTTGATTCCATCGCATCAATTCAAACCACTTTAACGAGTGTATTCACTGCTCAATGA

Protein sequence

MAVVAGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHFYAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSGEVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNPSCSGTVYLEIRLVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGCGYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVRSIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSKSLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFALARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIASIQTTLTSVFTAQ

Homology

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BLAST of Lsi01G019860 vs. Swiss-Prot
Match: NDC1_ARATH (Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDC1 PE=1 SV=2)

HSP 1 Score: 438.0 bits (1125), Expect = 1.3e-121
Identity = 246/401 (61.35%), Postives = 285/401 (71.07%), Query Frame = 1


Query: 6   GASRQSGKLFPGSSRRLGTNLC-RFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHFY 65
           GA+R + K    +SR  G NL  R++S+R   +   +  +  NN G TEIS++E A   Y
Sbjct: 16  GATRLTSKASL-ASRTSGFNLSSRWNSTRNSPM-LYLSRAVTNNSGTTEISDNETAPRTY 75

Query: 66  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSG 125
           +WPD K+PRVCILGGGFGGLYTALRLESL WP++KKPQV+LVDQSE FVFKPMLYELLSG
Sbjct: 76  SWPDNKRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSERFVFKPMLYELLSG 135

Query: 126 EVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNPSCS---GTVYLEIR----- 185
           EVD WEIAPRFSDLL NT IQF++D+VK L PCDH        S   GTV LE       
Sbjct: 136 EVDVWEIAPRFSDLLTNTGIQFLRDRVKTLLPCDHLGVNGSEISVTGGTVLLESGFKIEY 195

Query: 186 --LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGC 245
             LVLALGAE+KLD+VPGA E A PF TL DA RV+ +L  LER NF   S I+VAVVGC
Sbjct: 196 DWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKLSKLERKNFKDGSAIKVAVVGC 255

Query: 246 GYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVR 305
           GY+GVELAATISERLQDRG+VQ+INV   I  +A  GNREAA+KVL SR V+LLLGY+V+
Sbjct: 256 GYAGVELAATISERLQDRGIVQSINVSKNILTSAPDGNREAAMKVLTSRKVQLLLGYLVQ 315

Query: 306 SIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSK 365
           SI+R  + E  E                   Y LELQPAERG + + +EAD+VLWTVG+K
Sbjct: 316 SIKRASNLEEDE------------------GYFLELQPAERGLESQIIEADIVLWTVGAK 375

Query: 366 SLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
            LL  LEPS      LPLNARGQAETDETLRVKGHPRIFAL
Sbjct: 376 PLLTKLEPSG--PNVLPLNARGQAETDETLRVKGHPRIFAL 394

[Close]

BLAST of Lsi01G019860 vs. Swiss-Prot
Match: NDBB_SYNY3 (Demethylphylloquinone reductase NdbB OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ndbB PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.2e-48
Identity = 125/326 (38.34%), Postives = 177/326 (54.29%), Query Frame = 1


Query: 71  KPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSGEVDAWE 130
           +PR+CILGGGFGGLYTALRL  L W  +  P+++LVDQ + F+F P LYEL++ E+  WE
Sbjct: 5   RPRICILGGGFGGLYTALRLGQLSWEGHTPPEIVLVDQRDRFLFAPFLYELVTEEMQTWE 64

Query: 131 IAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNPSCSGTVYLEI-RLVLALGAEAKLDL 190
           IAP F +LLA + + F Q +V  +D        N    GT  L   +LV+ALG +  L  
Sbjct: 65  IAPPFVELLAESGVIFRQAEVTAIDFDHQKVLLNDQDKGTESLAFDQLVIALGGQTPLPN 124

Query: 191 VPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGCGYSGVELAATISERL 250
           +PG  +Y L F TL DA ++  +LK+LE+ +  K   IR+A+VG GYSGVELAA + +RL
Sbjct: 125 LPGLKDYGLGFRTLEDAYKLKQKLKSLEQADAEK---IRIAIVGGGYSGVELAAKLGDRL 184

Query: 251 QDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVRSIQRVDDAETSEKPN 310
            +RG ++ I     I   +   NR+ A   L ++ + +             D ET+    
Sbjct: 185 GERGRIRIIERGKEILAMSPEFNRQQAQASLSAKGIWV-------------DTETTV--- 244

Query: 311 DNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSKSLLPTLEPSENYHKQ 370
                       A++   + LQ  E   Q   +  DLVLWTVG+     T+ P    +  
Sbjct: 245 -----------TAITATDVTLQFRE---QEDVIPVDLVLWTVGT-----TVSPLIR-NLA 291

Query: 371 LPLNARGQAETDETLRVKGHPRIFAL 396
           LP N +GQ  T+  L+V+G   IFAL
Sbjct: 305 LPHNDQGQLRTNAQLQVEGKTNIFAL 291

[Close]

BLAST of Lsi01G019860 vs. Swiss-Prot
Match: YUTJ_BACSU (NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain 168) GN=yutJ PE=3 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 4.5e-10
Identity = 54/192 (28.12%), Postives = 86/192 (44.79%), Query Frame = 1


Query: 73  RVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSGEVDAWEIA 132
           ++ ++GGG+G +    RL     PD+    + L+D++ +   K   Y L +G +    I 
Sbjct: 3   KLVLIGGGYGNMRVLHRLLPNQLPDDVS--ITLIDRNPYHCLKTEYYALAAGTISDHHIR 62

Query: 133 ------PRFSDLLAN-TSIQFVQDKVKLLD--PCDHYDAKNPSCSGTVYLEIRLVLALGA 192
                 PR      + TSI  VQ +V   D  P  + DA               ++ LG 
Sbjct: 63  VSFPEHPRLDVQYGDITSIDIVQKQVLFQDREPISYDDA---------------IIGLGC 122

Query: 193 EAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGCGYSGVELAA 252
           E K   VPGA E+       +  Q +D   +T +++N N  +   VA+VG G SGVELA+
Sbjct: 123 EDKYHNVPGAPEFT------YSIQTIDQSRETYQKLN-NLSANATVAIVGAGLSGVELAS 170

Query: 253 TISERLQDRGLV 256
            + E   D  ++
Sbjct: 183 ELRESRDDLNII 170

[Close]

BLAST of Lsi01G019860 vs. Swiss-Prot
Match: DHNA_ECOLI (NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 5.0e-09
Identity = 65/251 (25.90%), Postives = 107/251 (42.63%), Query Frame = 1


Query: 73  RVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSGEVDAWEIA 132
           ++ I+GGG GGL  A +L        KK ++ LVD++   ++KP+L+E+ +G +D    A
Sbjct: 7   KIVIVGGGAGGLEMATQLGHKLG-RKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDA 66

Query: 133 PRFSDLLANTSIQF-------VQDKVKLLDPCDHYDAKNPSCSGTVYLEIR------LVL 192
             +     N   QF       +  + K +   +  D K     G + +  R      LV+
Sbjct: 67  LSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEK-----GELLVPERKIAYDTLVM 126

Query: 193 ALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTL---ERINFNKKSLIRVAVVGCGY 252
           ALG+ +     PG  E  +       A+R    +  L      N      + +A+VG G 
Sbjct: 127 ALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGA 186

Query: 253 SGVELAATISERLQD------RGLV-QAINVETM-----ICPTASPGNREAALKVLQSRN 296
           +GVEL+A +   ++       +GL  +A+NV  +     I P   P    AA   L    
Sbjct: 187 TGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLG 246

[Close]

BLAST of Lsi01G019860 vs. Swiss-Prot
Match: AIFB_DICDI (Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum GN=aifB PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.5e-08
Identity = 78/338 (23.08%), Postives = 135/338 (39.94%), Query Frame = 1


Query: 70  KKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSGEVDAW 129
           +K RV I+GGG+GG   A +L+S F        V +V++ + F                 
Sbjct: 4   EKKRVLIIGGGYGGCEVAKQLDSKF-------NVTVVERKQTF----------------- 63

Query: 130 EIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNPSCSGTVYLEIRLVLAL---GAEAK 189
                F  + +  ++   +   K+  P D          GTV +EI   LA    G E  
Sbjct: 64  -----FHSVGSVRAVVEPELVKKIYIPYDKLLKNGKFIFGTV-IEISPTLAKLEDGQELT 123

Query: 190 LD---LVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGCGYSGVELAA 249
            D   +  G+   A PF    + +     L   +  +   K    + +VG G    EL +
Sbjct: 124 FDYLVIATGSNSLA-PFKAPLEKKSSSEILNYFQNFSQQIKQAKSILIVGGGAVACELVS 183

Query: 250 TISER--LQDRGLVQAINV----ETMICPTASPGNREAALKVLQSRNVELLLGYIVRSIQ 309
            I E+  ++D  LV+ I +      ++ P  +        K ++ RNVE++L   +    
Sbjct: 184 EIVEKYPVKDSELVKKITIVHSGSKLVNPKMNDKFTNVVSKAMKKRNVEVILNDRI---- 243

Query: 310 RVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSKSLL 369
            + D   +   N   P    +  ++   Y  E        +G  ++ADL++WTVG K   
Sbjct: 244 TMPDEIKANLLNQTSP----NIQISSQNYTTE--------KGVPIQADLIIWTVGIK--- 290

Query: 370 PTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
            T   S   H    +N  GQ + + + +V+G+  +FA+
Sbjct: 304 -TNSESYQSHFSNVINESGQLKVNLSCQVQGYNNVFAI 290

[Close]

BLAST of Lsi01G019860 vs. TrEMBL
Match: A0A0A0L3R8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G495230 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 3.9e-202
Identity = 362/401 (90.27%), Postives = 371/401 (92.52%), Query Frame = 1


Query: 5   AGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHFY 64
           AGAS  SGKLFPGSS RLGTN CRFSSSRGKGIRCA+ SSS NNGG+ EISESELAKHFY
Sbjct: 18  AGASGGSGKLFPGSSGRLGTNSCRFSSSRGKGIRCAVSSSSNNNGGVAEISESELAKHFY 77

Query: 65  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSG 124
           AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQV+LVDQSEHFVFKPMLYELLSG
Sbjct: 78  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVVLVDQSEHFVFKPMLYELLSG 137

Query: 125 EVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDA---KNPSCSGTVYLEIR----- 184
           EVDAWEIAPRFSDLLANTSIQF+QDKVKL+DPCDHYDA   KNPSCSGTVYLE       
Sbjct: 138 EVDAWEIAPRFSDLLANTSIQFIQDKVKLVDPCDHYDANNPKNPSCSGTVYLESGLHIEY 197

Query: 185 --LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGC 244
             LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLK LERINFNKKSLIRVA+VGC
Sbjct: 198 DWLVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKILERINFNKKSLIRVAIVGC 257

Query: 245 GYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVR 304
           GYSGVELAATISERLQDRGLVQAINVETMICPTA PGNREAALKVL SRNVELLLGYIVR
Sbjct: 258 GYSGVELAATISERLQDRGLVQAINVETMICPTAPPGNREAALKVLSSRNVELLLGYIVR 317

Query: 305 SIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSK 364
           SIQRVDDAETSE+ N NRPSQGT  DLA SRYRLELQPAERGSQGR LEADLVLWTVGSK
Sbjct: 318 SIQRVDDAETSEEAN-NRPSQGTQPDLATSRYRLELQPAERGSQGRILEADLVLWTVGSK 377

Query: 365 SLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
           SLLPTLEPS+NY KQLPLN RGQAETDETLRV+GHPRIFAL
Sbjct: 378 SLLPTLEPSKNYRKQLPLNGRGQAETDETLRVRGHPRIFAL 417

[Close]

BLAST of Lsi01G019860 vs. TrEMBL
Match: F6H4F2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02690 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 3.4e-142
Identity = 269/402 (66.92%), Postives = 308/402 (76.62%), Query Frame = 1


Query: 4   VAGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHF 63
           V+G S+Q G LFPGSSR+L  N+    + + KG       +++ NGG+ E+ E E A   
Sbjct: 18  VSGRSKQWGMLFPGSSRKLAINMSILMNFQSKGFSFVASGATQWNGGVAELVEGEAASRP 77

Query: 64  YAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLS 123
           Y WPD KKPRVCILGGGFGGLYTALRLESL WP++KKPQVLLVDQSE FVFKPMLYELL+
Sbjct: 78  YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLT 137

Query: 124 GEVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNP---SCSGTVYLEIRLV-- 183
           GEVDAWEIAPRFSDLLANT +QF QD+VK+L P DH     P   SC GTV+LE  LV  
Sbjct: 138 GEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPTVSSCGGTVHLESGLVIE 197

Query: 184 -----LALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVG 243
                LALGAEAKLD+VPGAAE+ALPFSTL DA RVD+RL+TLER  F +   IRVAVVG
Sbjct: 198 YDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTLERKRFGRDFPIRVAVVG 257

Query: 244 CGYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIV 303
           CGYSGVELAAT+SERLQD+G+VQAINVET ICPTA PGNREAALKVL SRNVELLLG+ V
Sbjct: 258 CGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREAALKVLSSRNVELLLGFFV 317

Query: 304 RSIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGS 363
           R I++   +E SEK  ++       ++    +  LELQPAERG Q + LEADL+LWTVGS
Sbjct: 318 RCIRKASISEVSEKQTESGTLLDAAAEHEPEKLILELQPAERGLQSQILEADLILWTVGS 377

Query: 364 KSLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
           K  LP LEP E  H +LPLNARGQAETDETLRVKGHPRIFA+
Sbjct: 378 KPQLPQLEPCEWPH-ELPLNARGQAETDETLRVKGHPRIFAV 418

[Close]

BLAST of Lsi01G019860 vs. TrEMBL
Match: M5WWB8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003934mg PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.2e-141
Identity = 273/405 (67.41%), Postives = 312/405 (77.04%), Query Frame = 1


Query: 8   SRQSGKLFPGSSRRLG-TNLCRFSSSRGKGIRCAIPSS-SKNNGGITEISESELAKHFYA 67
           ++   +LFPG SRR G TN+   +SS+ KG R A+ SS S  NG + EI E+E A   Y+
Sbjct: 20  AKHLARLFPGFSRRCGETNISLSASSQQKGFRFAVASSASGTNGNVAEIPEAETAPQLYS 79

Query: 68  WPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSGE 127
           WPD K+PRVCILGGGFGGLYTALRLESL WPD++KPQVLLVDQSE FVFKPMLYELLSGE
Sbjct: 80  WPDKKRPRVCILGGGFGGLYTALRLESLEWPDDRKPQVLLVDQSERFVFKPMLYELLSGE 139

Query: 128 VDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNP---SCSGTVYLEIRL----- 187
           VDAWEIAPRFSDLLANTS+ F QDK KLL P DH +   P   SC G+V LE  L     
Sbjct: 140 VDAWEIAPRFSDLLANTSVLFFQDKAKLLYPSDHLEVNGPTQSSCGGSVLLESGLLVEYD 199

Query: 188 --VLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGCG 247
             VLALGAEAKLD+VPGA E+ALPFSTL DA++VD +L+TLER NF K+S IRVAVVGCG
Sbjct: 200 WLVLALGAEAKLDVVPGAIEFALPFSTLEDARKVDHKLRTLERRNFRKESAIRVAVVGCG 259

Query: 248 YSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVRS 307
           YSGVELAAT+SERLQDRG V+AINVET ICP A PGNREAA+KVL SR VELLLGY+VR 
Sbjct: 260 YSGVELAATVSERLQDRGTVKAINVETTICPNAPPGNREAAIKVLSSRKVELLLGYVVRC 319

Query: 308 IQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSKS 367
           I+R  D E SEKP  +       S+    +Y LELQPA+RG Q +T+EAD+VLWTVG+KS
Sbjct: 320 IRRDVDLEASEKPTKSIGVAQHDSE----KYILELQPAQRGLQSQTVEADIVLWTVGNKS 379

Query: 368 LLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFALARKIA 401
           LLP LEP +  +  LPLNARGQAETDETLRV GHPRIFA+    A
Sbjct: 380 LLPKLEPRDRPY-DLPLNARGQAETDETLRVNGHPRIFAVGDSCA 419

[Close]

BLAST of Lsi01G019860 vs. TrEMBL
Match: A0A061DKZ0_THECC (NAD(P)H dehydrogenase C1 isoform 1 OS=Theobroma cacao GN=TCM_001609 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 7.4e-137
Identity = 269/417 (64.51%), Postives = 307/417 (73.62%), Query Frame = 1


Query: 4   VAGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHF 63
           + G  ++  +LFPG S RL       S  R      A  +  K  G +TEIS+++     
Sbjct: 15  IFGGGKKWNQLFPGYSTRLRVGPSGLSKFRTCSFASAA-TGGKAGGALTEISQADETPRI 74

Query: 64  YAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLS 123
           ++WP  K+PRVCILGGGFGGLYTALRLESL WPD+KKPQVLLVDQSE FVFKPMLYELLS
Sbjct: 75  FSWPHNKRPRVCILGGGFGGLYTALRLESLVWPDDKKPQVLLVDQSERFVFKPMLYELLS 134

Query: 124 GEVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNP---SCSGTVYLEIRL--- 183
           GEVDAWEIAP FS+LLANT ++FVQD+VKLL P DH+    P   SC GTV LE  L   
Sbjct: 135 GEVDAWEIAPLFSELLANTGVEFVQDRVKLLHPSDHWGTNGPKQSSCGGTVLLESGLLIE 194

Query: 184 ----VLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVG 243
               VLALGAEAKLD+VPGA E+ALPFSTL DA +VD +L+ LER NF K SLIRVAVVG
Sbjct: 195 YDWLVLALGAEAKLDIVPGALEFALPFSTLEDACKVDKKLRALERKNFGKGSLIRVAVVG 254

Query: 244 CGYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIV 303
           CGYSGVELAAT+SERLQDRG+VQAINVET ICPTA  GNREAALKVL SR V+LLLGY V
Sbjct: 255 CGYSGVELAATVSERLQDRGIVQAINVETTICPTAPTGNREAALKVLSSRKVQLLLGYFV 314

Query: 304 RSIQRVDDAETSEKPNDNRPSQGTHSDLA---LSRYRLELQPAERGSQGRTLEADLVLWT 363
           R IQRV D E S + + +        D+A     +Y LELQPAERG + + LEADLVLWT
Sbjct: 315 RCIQRVSDVEASAEASADATGIREGKDIAECNSEKYVLELQPAERGLESQILEADLVLWT 374

Query: 364 VGSKSLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFALARKIAYLIRLPT 408
           VGSK+LLP LEP +  H +LPLNARGQAETDETL+VKGHPRIFAL    A  +R PT
Sbjct: 375 VGSKALLPELEPCDKPH-ELPLNARGQAETDETLQVKGHPRIFALGDSSA--LRDPT 427

[Close]

BLAST of Lsi01G019860 vs. TrEMBL
Match: A0A061DRZ6_THECC (NAD(P)H dehydrogenase C1 isoform 3 OS=Theobroma cacao GN=TCM_001609 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 7.4e-137
Identity = 269/417 (64.51%), Postives = 307/417 (73.62%), Query Frame = 1


Query: 4   VAGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHF 63
           + G  ++  +LFPG S RL       S  R      A  +  K  G +TEIS+++     
Sbjct: 15  IFGGGKKWNQLFPGYSTRLRVGPSGLSKFRTCSFASAA-TGGKAGGALTEISQADETPRI 74

Query: 64  YAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLS 123
           ++WP  K+PRVCILGGGFGGLYTALRLESL WPD+KKPQVLLVDQSE FVFKPMLYELLS
Sbjct: 75  FSWPHNKRPRVCILGGGFGGLYTALRLESLVWPDDKKPQVLLVDQSERFVFKPMLYELLS 134

Query: 124 GEVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNP---SCSGTVYLEIRL--- 183
           GEVDAWEIAP FS+LLANT ++FVQD+VKLL P DH+    P   SC GTV LE  L   
Sbjct: 135 GEVDAWEIAPLFSELLANTGVEFVQDRVKLLHPSDHWGTNGPKQSSCGGTVLLESGLLIE 194

Query: 184 ----VLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVG 243
               VLALGAEAKLD+VPGA E+ALPFSTL DA +VD +L+ LER NF K SLIRVAVVG
Sbjct: 195 YDWLVLALGAEAKLDIVPGALEFALPFSTLEDACKVDKKLRALERKNFGKGSLIRVAVVG 254

Query: 244 CGYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIV 303
           CGYSGVELAAT+SERLQDRG+VQAINVET ICPTA  GNREAALKVL SR V+LLLGY V
Sbjct: 255 CGYSGVELAATVSERLQDRGIVQAINVETTICPTAPTGNREAALKVLSSRKVQLLLGYFV 314

Query: 304 RSIQRVDDAETSEKPNDNRPSQGTHSDLA---LSRYRLELQPAERGSQGRTLEADLVLWT 363
           R IQRV D E S + + +        D+A     +Y LELQPAERG + + LEADLVLWT
Sbjct: 315 RCIQRVSDVEASAEASADATGIREGKDIAECNSEKYVLELQPAERGLESQILEADLVLWT 374

Query: 364 VGSKSLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFALARKIAYLIRLPT 408
           VGSK+LLP LEP +  H +LPLNARGQAETDETL+VKGHPRIFAL    A  +R PT
Sbjct: 375 VGSKALLPELEPCDKPH-ELPLNARGQAETDETLQVKGHPRIFALGDSSA--LRDPT 427

[Close]

BLAST of Lsi01G019860 vs. TAIR10
Match: AT5G08740.1 (AT5G08740.1 NAD(P)H dehydrogenase C1)

HSP 1 Score: 438.0 bits (1125), Expect = 7.1e-123
Identity = 246/401 (61.35%), Postives = 285/401 (71.07%), Query Frame = 1


Query: 6   GASRQSGKLFPGSSRRLGTNLC-RFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHFY 65
           GA+R + K    +SR  G NL  R++S+R   +   +  +  NN G TEIS++E A   Y
Sbjct: 16  GATRLTSKASL-ASRTSGFNLSSRWNSTRNSPM-LYLSRAVTNNSGTTEISDNETAPRTY 75

Query: 66  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSG 125
           +WPD K+PRVCILGGGFGGLYTALRLESL WP++KKPQV+LVDQSE FVFKPMLYELLSG
Sbjct: 76  SWPDNKRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSERFVFKPMLYELLSG 135

Query: 126 EVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNPSCS---GTVYLEIR----- 185
           EVD WEIAPRFSDLL NT IQF++D+VK L PCDH        S   GTV LE       
Sbjct: 136 EVDVWEIAPRFSDLLTNTGIQFLRDRVKTLLPCDHLGVNGSEISVTGGTVLLESGFKIEY 195

Query: 186 --LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGC 245
             LVLALGAE+KLD+VPGA E A PF TL DA RV+ +L  LER NF   S I+VAVVGC
Sbjct: 196 DWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKLSKLERKNFKDGSAIKVAVVGC 255

Query: 246 GYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVR 305
           GY+GVELAATISERLQDRG+VQ+INV   I  +A  GNREAA+KVL SR V+LLLGY+V+
Sbjct: 256 GYAGVELAATISERLQDRGIVQSINVSKNILTSAPDGNREAAMKVLTSRKVQLLLGYLVQ 315

Query: 306 SIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSK 365
           SI+R  + E  E                   Y LELQPAERG + + +EAD+VLWTVG+K
Sbjct: 316 SIKRASNLEEDE------------------GYFLELQPAERGLESQIIEADIVLWTVGAK 375

Query: 366 SLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
            LL  LEPS      LPLNARGQAETDETLRVKGHPRIFAL
Sbjct: 376 PLLTKLEPSG--PNVLPLNARGQAETDETLRVKGHPRIFAL 394

[Close]

BLAST of Lsi01G019860 vs. NCBI nr
Match: gi|778694890|ref|XP_011653891.1| (PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 719.2 bits (1855), Expect = 4.5e-204
Identity = 366/405 (90.37%), Postives = 375/405 (92.59%), Query Frame = 1


Query: 1   MAVVAGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELA 60
           MAVVAGAS  SGKLFPGSS RLGTN CRFSSSRGKGIRCA+ SSS NNGG+ EISESELA
Sbjct: 38  MAVVAGASGGSGKLFPGSSGRLGTNSCRFSSSRGKGIRCAVSSSSNNNGGVAEISESELA 97

Query: 61  KHFYAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYE 120
           KHFYAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQV+LVDQSEHFVFKPMLYE
Sbjct: 98  KHFYAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVVLVDQSEHFVFKPMLYE 157

Query: 121 LLSGEVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDA---KNPSCSGTVYLEIR- 180
           LLSGEVDAWEIAPRFSDLLANTSIQF+QDKVKL+DPCDHYDA   KNPSCSGTVYLE   
Sbjct: 158 LLSGEVDAWEIAPRFSDLLANTSIQFIQDKVKLVDPCDHYDANNPKNPSCSGTVYLESGL 217

Query: 181 ------LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVA 240
                 LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLK LERINFNKKSLIRVA
Sbjct: 218 HIEYDWLVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKILERINFNKKSLIRVA 277

Query: 241 VVGCGYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLG 300
           +VGCGYSGVELAATISERLQDRGLVQAINVETMICPTA PGNREAALKVL SRNVELLLG
Sbjct: 278 IVGCGYSGVELAATISERLQDRGLVQAINVETMICPTAPPGNREAALKVLSSRNVELLLG 337

Query: 301 YIVRSIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWT 360
           YIVRSIQRVDDAETSE+ N NRPSQGT  DLA SRYRLELQPAERGSQGR LEADLVLWT
Sbjct: 338 YIVRSIQRVDDAETSEEAN-NRPSQGTQPDLATSRYRLELQPAERGSQGRILEADLVLWT 397

Query: 361 VGSKSLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
           VGSKSLLPTLEPS+NY KQLPLN RGQAETDETLRV+GHPRIFAL
Sbjct: 398 VGSKSLLPTLEPSKNYRKQLPLNGRGQAETDETLRVRGHPRIFAL 441

[Close]

BLAST of Lsi01G019860 vs. NCBI nr
Match: gi|449457355|ref|XP_004146414.1| (PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 712.2 bits (1837), Expect = 5.5e-202
Identity = 362/401 (90.27%), Postives = 371/401 (92.52%), Query Frame = 1


Query: 5   AGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHFY 64
           AGAS  SGKLFPGSS RLGTN CRFSSSRGKGIRCA+ SSS NNGG+ EISESELAKHFY
Sbjct: 18  AGASGGSGKLFPGSSGRLGTNSCRFSSSRGKGIRCAVSSSSNNNGGVAEISESELAKHFY 77

Query: 65  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSG 124
           AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQV+LVDQSEHFVFKPMLYELLSG
Sbjct: 78  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVVLVDQSEHFVFKPMLYELLSG 137

Query: 125 EVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDA---KNPSCSGTVYLEIR----- 184
           EVDAWEIAPRFSDLLANTSIQF+QDKVKL+DPCDHYDA   KNPSCSGTVYLE       
Sbjct: 138 EVDAWEIAPRFSDLLANTSIQFIQDKVKLVDPCDHYDANNPKNPSCSGTVYLESGLHIEY 197

Query: 185 --LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGC 244
             LVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLK LERINFNKKSLIRVA+VGC
Sbjct: 198 DWLVLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKILERINFNKKSLIRVAIVGC 257

Query: 245 GYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVR 304
           GYSGVELAATISERLQDRGLVQAINVETMICPTA PGNREAALKVL SRNVELLLGYIVR
Sbjct: 258 GYSGVELAATISERLQDRGLVQAINVETMICPTAPPGNREAALKVLSSRNVELLLGYIVR 317

Query: 305 SIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSK 364
           SIQRVDDAETSE+ N NRPSQGT  DLA SRYRLELQPAERGSQGR LEADLVLWTVGSK
Sbjct: 318 SIQRVDDAETSEEAN-NRPSQGTQPDLATSRYRLELQPAERGSQGRILEADLVLWTVGSK 377

Query: 365 SLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
           SLLPTLEPS+NY KQLPLN RGQAETDETLRV+GHPRIFAL
Sbjct: 378 SLLPTLEPSKNYRKQLPLNGRGQAETDETLRVRGHPRIFAL 417

[Close]

BLAST of Lsi01G019860 vs. NCBI nr
Match: gi|659083036|ref|XP_008442152.1| (PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 695.7 bits (1794), Expect = 5.4e-197
Identity = 353/401 (88.03%), Postives = 368/401 (91.77%), Query Frame = 1


Query: 5   AGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHFY 64
           AGASR SGKLFPGSS  LGTN  RFSSSR KGIRCA+ SSS NNGG+ EISE+ELAKHFY
Sbjct: 18  AGASRGSGKLFPGSSGGLGTNSFRFSSSRVKGIRCAVSSSSNNNGGVAEISENELAKHFY 77

Query: 65  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSG 124
           AWPDYKKPRVCILGGGFGGLYTALRLESL+WPDNKKPQV+LVDQSEHFVFKPMLYELLSG
Sbjct: 78  AWPDYKKPRVCILGGGFGGLYTALRLESLYWPDNKKPQVVLVDQSEHFVFKPMLYELLSG 137

Query: 125 EVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDA---KNPSCSGTVYLEIRL---- 184
           EVDAWE+APRFSDLLANTSIQF+QDKVKL+DPCDHYDA   KNPSCSGTVYLE  L    
Sbjct: 138 EVDAWEVAPRFSDLLANTSIQFIQDKVKLVDPCDHYDANNPKNPSCSGTVYLESGLHIEY 197

Query: 185 ---VLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGC 244
              VLALGAEAKLDLVPGAAEYALPFSTL DAQRVDS+LK LERINF+KKSLIRVAVVGC
Sbjct: 198 DWLVLALGAEAKLDLVPGAAEYALPFSTLSDAQRVDSQLKILERINFSKKSLIRVAVVGC 257

Query: 245 GYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVR 304
           GYSGVELAATISERLQDRGLVQAIN+ETMICPTA PGNREAALKVL SRNVELLLGYIVR
Sbjct: 258 GYSGVELAATISERLQDRGLVQAINMETMICPTAPPGNREAALKVLSSRNVELLLGYIVR 317

Query: 305 SIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSK 364
           SIQRVDDAET+E+ N+NRPSQGT  DLA SRYRLELQP ERGSQGR LEADLVLWTVGSK
Sbjct: 318 SIQRVDDAETTEEVNNNRPSQGTQPDLATSRYRLELQPTERGSQGRILEADLVLWTVGSK 377

Query: 365 SLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
           SLLPTLEPSENY KQLPLN RGQAETDETLRV+GHPRIFAL
Sbjct: 378 SLLPTLEPSENYRKQLPLNGRGQAETDETLRVRGHPRIFAL 418

[Close]

BLAST of Lsi01G019860 vs. NCBI nr
Match: gi|659083038|ref|XP_008442153.1| (PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 695.7 bits (1794), Expect = 5.4e-197
Identity = 353/401 (88.03%), Postives = 368/401 (91.77%), Query Frame = 1


Query: 5   AGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHFY 64
           AGASR SGKLFPGSS  LGTN  RFSSSR KGIRCA+ SSS NNGG+ EISE+ELAKHFY
Sbjct: 3   AGASRGSGKLFPGSSGGLGTNSFRFSSSRVKGIRCAVSSSSNNNGGVAEISENELAKHFY 62

Query: 65  AWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLSG 124
           AWPDYKKPRVCILGGGFGGLYTALRLESL+WPDNKKPQV+LVDQSEHFVFKPMLYELLSG
Sbjct: 63  AWPDYKKPRVCILGGGFGGLYTALRLESLYWPDNKKPQVVLVDQSEHFVFKPMLYELLSG 122

Query: 125 EVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDA---KNPSCSGTVYLEIRL---- 184
           EVDAWE+APRFSDLLANTSIQF+QDKVKL+DPCDHYDA   KNPSCSGTVYLE  L    
Sbjct: 123 EVDAWEVAPRFSDLLANTSIQFIQDKVKLVDPCDHYDANNPKNPSCSGTVYLESGLHIEY 182

Query: 185 ---VLALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVGC 244
              VLALGAEAKLDLVPGAAEYALPFSTL DAQRVDS+LK LERINF+KKSLIRVAVVGC
Sbjct: 183 DWLVLALGAEAKLDLVPGAAEYALPFSTLSDAQRVDSQLKILERINFSKKSLIRVAVVGC 242

Query: 245 GYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIVR 304
           GYSGVELAATISERLQDRGLVQAIN+ETMICPTA PGNREAALKVL SRNVELLLGYIVR
Sbjct: 243 GYSGVELAATISERLQDRGLVQAINMETMICPTAPPGNREAALKVLSSRNVELLLGYIVR 302

Query: 305 SIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGSK 364
           SIQRVDDAET+E+ N+NRPSQGT  DLA SRYRLELQP ERGSQGR LEADLVLWTVGSK
Sbjct: 303 SIQRVDDAETTEEVNNNRPSQGTQPDLATSRYRLELQPTERGSQGRILEADLVLWTVGSK 362

Query: 365 SLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
           SLLPTLEPSENY KQLPLN RGQAETDETLRV+GHPRIFAL
Sbjct: 363 SLLPTLEPSENYRKQLPLNGRGQAETDETLRVRGHPRIFAL 403

[Close]

BLAST of Lsi01G019860 vs. NCBI nr
Match: gi|731397633|ref|XP_010652944.1| (PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial [Vitis vinifera])

HSP 1 Score: 513.1 bits (1320), Expect = 4.9e-142
Identity = 269/402 (66.92%), Postives = 308/402 (76.62%), Query Frame = 1


Query: 4   VAGASRQSGKLFPGSSRRLGTNLCRFSSSRGKGIRCAIPSSSKNNGGITEISESELAKHF 63
           V+G S+Q G LFPGSSR+L  N+    + + KG       +++ NGG+ E+ E E A   
Sbjct: 18  VSGRSKQWGMLFPGSSRKLAINMSILMNFQSKGFSFVASGATQWNGGVAELVEGEAASRP 77

Query: 64  YAWPDYKKPRVCILGGGFGGLYTALRLESLFWPDNKKPQVLLVDQSEHFVFKPMLYELLS 123
           Y WPD KKPRVCILGGGFGGLYTALRLESL WP++KKPQVLLVDQSE FVFKPMLYELL+
Sbjct: 78  YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLT 137

Query: 124 GEVDAWEIAPRFSDLLANTSIQFVQDKVKLLDPCDHYDAKNP---SCSGTVYLEIRLV-- 183
           GEVDAWEIAPRFSDLLANT +QF QD+VK+L P DH     P   SC GTV+LE  LV  
Sbjct: 138 GEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPTVSSCGGTVHLESGLVIE 197

Query: 184 -----LALGAEAKLDLVPGAAEYALPFSTLWDAQRVDSRLKTLERINFNKKSLIRVAVVG 243
                LALGAEAKLD+VPGAAE+ALPFSTL DA RVD+RL+TLER  F +   IRVAVVG
Sbjct: 198 YDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTLERKRFGRDFPIRVAVVG 257

Query: 244 CGYSGVELAATISERLQDRGLVQAINVETMICPTASPGNREAALKVLQSRNVELLLGYIV 303
           CGYSGVELAAT+SERLQD+G+VQAINVET ICPTA PGNREAALKVL SRNVELLLG+ V
Sbjct: 258 CGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREAALKVLSSRNVELLLGFFV 317

Query: 304 RSIQRVDDAETSEKPNDNRPSQGTHSDLALSRYRLELQPAERGSQGRTLEADLVLWTVGS 363
           R I++   +E SEK  ++       ++    +  LELQPAERG Q + LEADL+LWTVGS
Sbjct: 318 RCIRKASISEVSEKQTESGTLLDAAAEHEPEKLILELQPAERGLQSQILEADLILWTVGS 377

Query: 364 KSLLPTLEPSENYHKQLPLNARGQAETDETLRVKGHPRIFAL 396
           K  LP LEP E  H +LPLNARGQAETDETLRVKGHPRIFA+
Sbjct: 378 KPQLPQLEPCEWPH-ELPLNARGQAETDETLRVKGHPRIFAV 418

The following BLAST results are available for this feature:

BLAST of Lsi01G019860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDC1_ARATH	1.3e-121	61.35	Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial OS...	[more]
NDBB_SYNY3	3.2e-48	38.34	Demethylphylloquinone reductase NdbB OS=Synechocystis sp. (strain PCC 6803 / Kaz...	[more]
YUTJ_BACSU	4.5e-10	28.13	NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain 168) GN=yutJ P...	[more]
DHNA_ECOLI	5.0e-09	25.90	NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1 SV=2	[more]
AIFB_DICDI	5.5e-08	23.08	Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum GN=aifB PE=3 SV=...	[more]

BLAST of Lsi01G019860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3R8_CUCSA	3.9e-202	90.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G495230 PE=4 SV=1	[more]
F6H4F2_VITVI	3.4e-142	66.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02690 PE=4 SV=...	[more]
M5WWB8_PRUPE	2.2e-141	67.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003934mg PE=4 SV=1	[more]
A0A061DKZ0_THECC	7.4e-137	64.51	NAD(P)H dehydrogenase C1 isoform 1 OS=Theobroma cacao GN=TCM_001609 PE=4 SV=1	[more]
A0A061DRZ6_THECC	7.4e-137	64.51	NAD(P)H dehydrogenase C1 isoform 3 OS=Theobroma cacao GN=TCM_001609 PE=4 SV=1	[more]

BLAST of Lsi01G019860 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08740.1	7.1e-123	61.35	NAD(P)H dehydrogenase C1	[more]

BLAST of Lsi01G019860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694890\|ref\|XP_011653891.1\|	4.5e-204	90.37	PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitoc...	[more]
gi\|449457355\|ref\|XP_004146414.1\|	5.5e-202	90.27	PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitoc...	[more]
gi\|659083036\|ref\|XP_008442152.1\|	5.4e-197	88.03	PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitoc...	[more]
gi\|659083038\|ref\|XP_008442153.1\|	5.4e-197	88.03	PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitoc...	[more]
gi\|731397633\|ref\|XP_010652944.1\|	4.9e-142	66.92	PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitoc...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR023753	FAD/NAD-binding_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019646	aerobic electron transport chain
biological_process	GO:0042372	phylloquinone biosynthetic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003954	NADH dehydrogenase activity
molecular_function	GO:0003955	NAD(P)H dehydrogenase (quinone) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G019860.1	Lsi01G019860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023753	FAD/NAD(P)-binding domain	GENE3D	G3DSA:3.50.50.60		coord: 70..177 score: 6.8E-11coord: 178..350 score: 1.3
IPR023753	FAD/NAD(P)-binding domain	PFAM	PF07992	Pyr_redox_2	coord: 73..395 score: 1.5
IPR023753	FAD/NAD(P)-binding domain	unknown	SSF51905	FAD/NAD(P)-binding domain	coord: 70..395 score: 2.22
None	No IPR available	PRINTS	PR00368	FADPNR	coord: 74..93 score: 2.3E-6coord: 228..246 score: 2.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G019860	Csa4G495230	Cucumber (Chinese Long) v2	culsiB250
Lsi01G019860	CSPI04G19950	Wild cucumber (PI 183967)	cpilsiB250
Lsi01G019860	Cucsa.353760	Cucumber (Gy14) v1	cgylsiB572
Lsi01G019860	CmoCh07G013090	Cucurbita moschata (Rifu)	cmolsiB776
Lsi01G019860	Cla011643	Watermelon (97103) v1	lsiwmB146
Lsi01G019860	MELO3C008946	Melon (DHL92) v3.5.1	lsimeB152
Lsi01G019860	ClCG04G001810	Watermelon (Charleston Gray)	lsiwcgB135
Lsi01G019860	MELO3C008946.2	Melon (DHL92) v3.6.1	lsimedB159
Lsi01G019860	Cla97C04G069600	Watermelon (97103) v2	lsiwmbB133
Lsi01G019860	Bhi03G002275	Wax gourd	lsiwgoB173
Lsi01G019860	Cp4.1LG19g01050	Cucurbita pepo (Zucchini)	cpelsiB400
Lsi01G019860	CsGy4G019140	Cucumber (Gy14) v2	cgyblsiB243
Lsi01G019860	Carg12696	Silver-seed gourd	carlsiB257
Lsi01G019860	CsaV3_4G030790	Cucumber (Chinese Long) v3	cuclsiB279

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G019860	Cucurbita maxima (Rimu)	cmalsiB792
Lsi01G019860	Cucurbita maxima (Rimu)	cmalsiB788
Lsi01G019860	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G019860	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G019860	Cucurbita pepo (Zucchini)	cpelsiB399
Lsi01G019860	Silver-seed gourd	carlsiB259
Lsi01G019860	Silver-seed gourd	carlsiB260
Lsi01G019860	Silver-seed gourd	carlsiB430
Lsi01G019860	Watermelon (97103) v2	lsiwmbB136