Lsi01G019350 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CATTGGGTTTCATGTTTTAGAAAAAGAATAGATTTTTGGGTTTTGGTTTAGTTGGGGCAATTTTCCAAATTTGAGGTGAATCGCAACAGTAATTACAGTTGAACATACATGAGAAAAGATTTGGAAGAATTTAAATCGAATCCATTCGCATCCTGCAGTACTTTGTTGCAGTCTACACGCTTAGCTTCTTCCGTCTCCTCATGATTTTCCTCTCCCCGCTGAAGAATTTCCAAACAAAATGGTTGCGACGACGGCCCTAGCTTAATCAGCAGATTCCATGGGAGACGGCAATAACACCAACAGAGGCCTTGTCTCGGCCAACGCCGCCAATAGGAACAACAACAACAACGGCAGCCACCACAAGAAGCCCGAGTGGCTGCAGCAGTACGATCTAATTGGGAAGATCGGAGAAGGAACCTATGGCCTCGTGTTCCTTGCTAAAATCAAACCCCCTTCGCCAAGTCGCGGCAAGTCAATTGCCATAAAAAAATTCAAGCAATCCAAGGACGGTGATGGCGTCTCTCCAACTGCCATCCGCGAAATTATGGTTTCTTCCTTTTCTCTCACTTCCCGTATTCTTTCATCCTCTGTTTGATTCGATTGTATTTGGGTTTAGGCTGAGGAAGGACGAGGAGAAGCAGTTCTTGATGTTAATACATTTTCCATTTTTAGTTTATTTTCCCCACGCAAGAAACAGGAAAGATATTGGGTTTCATTTTTCAAATAATCATGACAAAACGATTAGGGTTTTTGTTAAAATTTATTGTTTAATGCAGCAAAGGGATTGAAGAACTCAATTCCCTTTTTTTGCTGGAGCTGTTAATCTTGCATTAAGCATTTCTGATAAATTAATCTTCTCTATCTTTTATGGTTCAGTTACTGCGGGAAATATCACACGAGAATGTCGTCAAGCTTGTAAATGTTCATATCAACCATGCAGATATGTCGCTGTATTTAGCTTTTGATTATGCTGAACATGACCTCTATGTGAGTTTATCTTGCTTCAATATGTTATGTTAAAGGATCGATTTGATTTGATATGGGTCGTTAAGGCCGAAAAATTCACAGTCCCTTTTGACCTGCAACCATATCCTTTTAGGTAGAGAACGAATAGCATTTGCGGATTTTAGAGGAAAGGAATATATCGTTTCATCTACTAATCATCTCTTCTTGACACATGCATATCTATGTAATCGGATGATCTTTGTATTTCTTTACAGGAAATCATTAGACATCACCGGGACAAGGCTAACCATCCCCTTAATCAGTACACCGTTAAATCATTGCTCTGGCAACTTCTCAATGGTTTGAACTATCTCCACAGGTAAAGTTGTAGTATGCCACTTTCTTAAATTTAGTTTCCTATCACAAGAAAACTTATAAAACAATTTCAACTTCTGTTGTTGCAGTAATTGGATCATTCATCGTGATTTAAAGCCATCAAATATTTTGGTAAAATCTATATGATACTTATGATGTTCACTAGACCCCATTTTCTCTCAACTTCAGGTTTTGCATAATCTGTTGTCTTCTTATGTGCGTACTCATTTTTTTGCTTGCATGTCTATTCTGTTACCAGGTTATGGGTGAAGGAGAAGAACAAGGAGTGGTTAAAATAGCTGATTTTGGACTTGCAAGAATATACCAAGCTCCCTTGAAGCCATTATCTGAAAATGGGGTACTGATCTCTTGTTTCCCTTTCATTTGAATTGTTCATTTGTTCATTTCTTTTCTGGTTCAAAGTTCAAACAATAATCTACAGATCACCTAATCTAAATGGGAATGGGTTAATGATAAATCCAAAACTTAAGAGTTCTAATGCTAAATACAGCTTAACAATTATTTTACAAGACAAAGAAGAATCTTCATGCTTAACTATTCTGACTTGGGAAGAGAGGAAGTAATGACCCCTGCTGGAATAAGAAAATTTTCTACCATCTAAAATGTGAAGTTGGACATTGTAGAAAATCTATAAAGTTAACTTGGGGCTGGAGTTGAAAGATATGGAGTACCTAATAAAAATTATTGCTAAAAATGACCAACCTTTAACCTAATGCCTTGTATAAATGGATATAACATTGAGAGATGAAAGAAATGAAAAAAAGGAACATGCTACCATCATCAACATCCTCATTGCCCAATAAATCTGCTTTGCTACAAGATTATATAAAACCAGAAAACATTGCATGTGAAAATGAACCTGTTTACTGTTAAGTTTTTGAGGTGCCCATTTGCAATTTGCTTGTAGGTTGTTGTCACCATTTGGTATCGAGCACCTGAACTTCTCCTTGGAGCAAAGCACTACACTAGTGCTGTTGGTATCCCTGATAAAATCATTTAG CATTGGGTTTCATGTTTTAGAAAAAGAATAGATTTTTGGGTTTTGGTTTAGTTGGGGCAATTTTCCAAATTTGAGGTGAATCGCAACAGTAATTACAGTTGAACATACATGAGAAAAGATTTGGAAGAATTTAAATCGAATCCATTCGCATCCTGCAGTACTTTGTTGCAGTCTACACGCTTAGCTTCTTCCGTCTCCTCATGATTTTCCTCTCCCCGCTGAAGAATTTCCAAACAAAATGGTTGCGACGACGGCCCTAGCTTAATCAGCAGATTCCATGGGAGACGGCAATAACACCAACAGAGGCCTTGTCTCGGCCAACGCCGCCAATAGGAACAACAACAACAACGGCAGCCACCACAAGAAGCCCGAGTGGCTGCAGCAGTACGATCTAATTGGGAAGATCGGAGAAGGAACCTATGGCCTCGTGTTCCTTGCTAAAATCAAACCCCCTTCGCCAAGTCGCGGCAAGTCAATTGCCATAAAAAAATTCAAGCAATCCAAGGACGGTGATGGCGTCTCTCCAACTGCCATCCGCGAAATTATGTTACTGCGGGAAATATCACACGAGAATGTCGTCAAGCTTGTAAATGTTCATATCAACCATGCAGATATGTCGCTGTATTTAGCTTTTGATTATGCTGAACATGACCTCTATGAAATCATTAGACATCACCGGGACAAGGCTAACCATCCCCTTAATCAGTACACCGTTAAATCATTGCTCTGGCAACTTCTCAATGGTTTGAACTATCTCCACAGTAATTGGATCATTCATCGTGATTTAAAGCCATCAAATATTTTGGTTATGGGTGAAGGAGAAGAACAAGGAGTGGTTAAAATAGCTGATTTTGGACTTGCAAGAATATACCAAGCTCCCTTGAAGCCATTATCTGAAAATGGGGTTGTTGTCACCATTTGGTATCGAGCACCTGAACTTCTCCTTGGAGCAAAGCACTACACTAGTGCTGTTGGTATCCCTGATAAAATCATTTAG ATGGGAGACGGCAATAACACCAACAGAGGCCTTGTCTCGGCCAACGCCGCCAATAGGAACAACAACAACAACGGCAGCCACCACAAGAAGCCCGAGTGGCTGCAGCAGTACGATCTAATTGGGAAGATCGGAGAAGGAACCTATGGCCTCGTGTTCCTTGCTAAAATCAAACCCCCTTCGCCAAGTCGCGGCAAGTCAATTGCCATAAAAAAATTCAAGCAATCCAAGGACGGTGATGGCGTCTCTCCAACTGCCATCCGCGAAATTATGTTACTGCGGGAAATATCACACGAGAATGTCGTCAAGCTTGTAAATGTTCATATCAACCATGCAGATATGTCGCTGTATTTAGCTTTTGATTATGCTGAACATGACCTCTATGAAATCATTAGACATCACCGGGACAAGGCTAACCATCCCCTTAATCAGTACACCGTTAAATCATTGCTCTGGCAACTTCTCAATGGTTTGAACTATCTCCACAGTAATTGGATCATTCATCGTGATTTAAAGCCATCAAATATTTTGGTTATGGGTGAAGGAGAAGAACAAGGAGTGGTTAAAATAGCTGATTTTGGACTTGCAAGAATATACCAAGCTCCCTTGAAGCCATTATCTGAAAATGGGGTTGTTGTCACCATTTGGTATCGAGCACCTGAACTTCTCCTTGGAGCAAAGCACTACACTAGTGCTGTTGGTATCCCTGATAAAATCATTTAG MGDGNNTNRGLVSANAANRNNNNNGSHHKKPEWLQQYDLIGKIGEGTYGLVFLAKIKPPSPSRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKANHPLNQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVGIPDKII
BLAST of Lsi01G019350 vs. Swiss-Prot
Match: CDKE1_ORYSJ (Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica GN=CDKE-1 PE=2 SV=2) HSP 1 Score: 371.3 bits (952), Expect = 7.9e-102 Identity = 181/215 (84.19%), Postives = 193/215 (89.77%), Query Frame = 1
BLAST of Lsi01G019350 vs. Swiss-Prot
Match: CDKE1_ARATH (Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana GN=CDKE-1 PE=1 SV=2) HSP 1 Score: 365.5 bits (937), Expect = 4.3e-100 Identity = 187/232 (80.60%), Postives = 202/232 (87.07%), Query Frame = 1
BLAST of Lsi01G019350 vs. Swiss-Prot
Match: CDK8_DICDI (Probable cyclin-dependent kinase 8 OS=Dictyostelium discoideum GN=cdk8 PE=2 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 6.3e-67 Identity = 123/200 (61.50%), Postives = 162/200 (81.00%), Query Frame = 1
BLAST of Lsi01G019350 vs. Swiss-Prot
Match: CDK8_MOUSE (Cyclin-dependent kinase 8 OS=Mus musculus GN=Cdk8 PE=2 SV=3) HSP 1 Score: 215.3 bits (547), Expect = 7.2e-55 Identity = 115/214 (53.74%), Postives = 154/214 (71.96%), Query Frame = 1
BLAST of Lsi01G019350 vs. Swiss-Prot
Match: CDK8_DROME (Cyclin-dependent kinase 8 OS=Drosophila melanogaster GN=Cdk8 PE=1 SV=2) HSP 1 Score: 215.3 bits (547), Expect = 7.2e-55 Identity = 110/198 (55.56%), Postives = 145/198 (73.23%), Query Frame = 1
BLAST of Lsi01G019350 vs. TrEMBL
Match: A0A0A0L1C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G561190 PE=3 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 6.4e-127 Identity = 230/233 (98.71%), Postives = 231/233 (99.14%), Query Frame = 1
BLAST of Lsi01G019350 vs. TrEMBL
Match: W9SYK1_9ROSA (Cyclin-dependent kinase E-1 OS=Morus notabilis GN=L484_014973 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 2.7e-109 Identity = 205/232 (88.36%), Postives = 212/232 (91.38%), Query Frame = 1
BLAST of Lsi01G019350 vs. TrEMBL
Match: A0A0K9RFE7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072860 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 3.0e-108 Identity = 194/214 (90.65%), Postives = 204/214 (95.33%), Query Frame = 1
BLAST of Lsi01G019350 vs. TrEMBL
Match: M5WJ27_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005051mg PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 1.9e-107 Identity = 200/233 (85.84%), Postives = 212/233 (90.99%), Query Frame = 1
BLAST of Lsi01G019350 vs. TrEMBL
Match: A0A0D2NVY5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G206400 PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 1.9e-107 Identity = 201/233 (86.27%), Postives = 214/233 (91.85%), Query Frame = 1
BLAST of Lsi01G019350 vs. TAIR10
Match: AT5G63610.1 (AT5G63610.1 cyclin-dependent kinase E;1) HSP 1 Score: 365.5 bits (937), Expect = 2.4e-101 Identity = 187/232 (80.60%), Postives = 202/232 (87.07%), Query Frame = 1
BLAST of Lsi01G019350 vs. TAIR10
Match: AT1G67580.1 (AT1G67580.1 Protein kinase superfamily protein) HSP 1 Score: 162.5 bits (410), Expect = 3.1e-40 Identity = 85/199 (42.71%), Postives = 128/199 (64.32%), Query Frame = 1
BLAST of Lsi01G019350 vs. TAIR10
Match: AT3G48750.1 (AT3G48750.1 cell division control 2) HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39 Identity = 84/201 (41.79%), Postives = 131/201 (65.17%), Query Frame = 1
BLAST of Lsi01G019350 vs. TAIR10
Match: AT2G38620.2 (AT2G38620.2 cyclin-dependent kinase B1;2) HSP 1 Score: 156.0 bits (393), Expect = 2.9e-38 Identity = 85/213 (39.91%), Postives = 136/213 (63.85%), Query Frame = 1
BLAST of Lsi01G019350 vs. TAIR10
Match: AT5G63370.1 (AT5G63370.1 Protein kinase superfamily protein) HSP 1 Score: 149.8 bits (377), Expect = 2.1e-36 Identity = 84/204 (41.18%), Postives = 126/204 (61.76%), Query Frame = 1
BLAST of Lsi01G019350 vs. NCBI nr
Match: gi|449453850|ref|XP_004144669.1| (PREDICTED: cyclin-dependent kinase E-1 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 9.2e-127 Identity = 230/233 (98.71%), Postives = 231/233 (99.14%), Query Frame = 1
BLAST of Lsi01G019350 vs. NCBI nr
Match: gi|700199706|gb|KGN54864.1| (hypothetical protein Csa_4G561190 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 9.2e-127 Identity = 230/233 (98.71%), Postives = 231/233 (99.14%), Query Frame = 1
BLAST of Lsi01G019350 vs. NCBI nr
Match: gi|659083182|ref|XP_008442225.1| (PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase E-1 [Cucumis melo]) HSP 1 Score: 452.6 bits (1163), Expect = 4.3e-124 Identity = 228/235 (97.02%), Postives = 230/235 (97.87%), Query Frame = 1
BLAST of Lsi01G019350 vs. NCBI nr
Match: gi|703159603|ref|XP_010112291.1| (Cyclin-dependent kinase E-1 [Morus notabilis]) HSP 1 Score: 402.9 bits (1034), Expect = 3.9e-109 Identity = 205/232 (88.36%), Postives = 212/232 (91.38%), Query Frame = 1
BLAST of Lsi01G019350 vs. NCBI nr
Match: gi|902219032|gb|KNA18208.1| (hypothetical protein SOVF_072860 [Spinacia oleracea]) HSP 1 Score: 399.4 bits (1025), Expect = 4.3e-108 Identity = 194/214 (90.65%), Postives = 204/214 (95.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |