Lsi01G019170 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTGGTCTACCAAAAATTGGCCCTTTCTGTTTCTTTTGTAAGATGTGTGAACCATAATACCCAACTTTCCAACAGTAACATATATATATATATATATATATATATATATCTTATAACTCGTGTTCGTGTTGGTTAACTTTTCATTTTAATTACATATTCCAGTCTTGAATTATATGTTTTGCTTAGATTAAGTAGAGGCAAATCAATAATTATTTAGCCAAAAGCAACATTAGGACTGAATTATTTTAAAAGGCACTATACCATATATTAACCAAAAAGTTTATACTTTAGTCCAACTAAACTAACATGAAAAGAAAAAGGAAAGTAAAGTAAAGATATAGTCATGTATGTTACAAAATTTGCAATTGTGTAAAGTACCAGTATTTTATTAATATATACATCGTCTATTTTATTAATCTCATTTGGGGGACGATCCTAGATCAGATTTTCGCTGTTTGGTTCTTTGCGAGTGCTTGATTTTGGGAAGAATCACAATGAAGGGAAGATTCCTGAGGGCATTGGGGCTTTGAAGAGTCTGCTATTCTCAATTTTAGAAGCAACTTGATTTCTGGTACAGTGCCTTCTGTTGTTTTTCATAATCTGACTGAACTTCTTGTCGTTGATTTGTCTGAAAATTCTTATCTGTTGAGTGATATTCCTAGTGAGATTGGGAAGCTTGAGGAGCTGTGACTTCACAGCTCTGGTTTCTATGGTGAAATCCCTTCTTCTTTGTTGGGTTTGAGAAGTTTGATTGTTTTGGATCTTTCTCAGAACAATCTCACTGGGAAACTCCCTGAAATGTTGGGTTCTTCTTTGAAGAATTTGTTGTCTTTTGATGTTTTTGATAATAAGCTTGTGGGGTCCTTTCCAAATGAATTTTGTAGTGGAAAAGGGCTTTTGAGTCTTAGTGTTCATACCCATTTTTTCACTGTGAGTTTGCCTAATTCCTTGAACCAGTGCTTGAATCTTGAGAGGTTTCAAGTTCAGAACAATGCGTTTTCTGGGGATTTTTCTAAAGCTTTGTGGTCATTGCCTAAGATTAAGCTCATCAGAGCTGAAAACAATGGTTTCTCGGGTGAAATTCCAGAGTCTAACGACCCTAGTTAGGAATAGATTAAGATAATTAGTATGGTAAAGAGTATAAGGGTAATTAATTAGGAAGTTAGTTACTGAATATTACTATAAATAGAAGGAGTGGGAATAGTGAAGGTGTGGAGAATTTGGTAGTGATTTCGGAAATATTGAGAGAGAGTAGCCCTCTCGAAAGGCTATGGTATATTGTAGTTTCTTCATTGATAATTACAATATGAATCTATCTTTTTGTGTTCTTTATTTGTTCATCGTGTTATGAGGGTATCCTAACAAATTGAAGAAACTACAATATACCATAGCCTTTCGAGAGGGCTATTCTCTCCCAATATTTCCCAATTAGGAAATCACTACCAAATTCTCCACACCTTCCCACTACTCCCACTCTTTCTATTTATAGCAATATTTAGTTATTAATTTCCTAATTAATTACTTTTATACTCTTTACCATACTAATTATCTCAATATATTCCTAACTAGGGTCCTTACATTATATCAATGGCTGCTCAGTTTGAGCAAGTTCAGCTTAATAACAACAGCTTTTCAAGTAGAACTCAGGGGTCTTGGGTTGATTTGAAGCTTATACCGATTCTCTGTGTAGCTCAATCGCTTTTATGGTGAATTGCCACCAAACTTCTTTGATTCACCATAAATGAGTATACTTAATATGTCCCACAATTCTCTTTCTGGTCGTATTTCCGAGTCGAAAAACTGCAAGAAACCGGTCCCTTTGTCCTTAGCAGGCTATAGTCTTACTGGAAGAATTCCTACTTCCCTAGCAGATCTACCCGTGTTTACTTATCTTGATCTTTCTGATAATAATCTCACTAGTTCGATCCCTCAAGGACTTGAGAACTTAAAGCTTGCGCTCTTTAATGTTTTGTTCAATCAACTATTGGGCGCTGTTCCGTTTTCCTTGATTTTGGGGCCTACCACTTCATTTATGGAAGGTGTGGTTTTTGGAGAGAATTTCCTTTTTTTTTTTTTTATTTTTATTTATTTATATTCCATTAACTCCAAATTACAAAAGATATAATACCATAAAAAATAGAAAAGGAAATAATTCTAGAAAGGAAAACACAATATTTTACACAAAAAAGGAATAAATCTACACTCCCCTTCAAGCTGGGTTGTATGTAGAGTACAAGCCAAGCTTAGAGTTGAAATCTTCAAAAGTTTTTCTTGGTAATGCTTTGGTGAGAATGTCTGCAATTTGATCACGAGATGACACATAAGATAATTCCACTGTGTTACTGTTGACCTACTCAAATATGAAATGACGATCGAGCTCTATGTGTCTTGTTCGGTCATGGTGCACAGGGTTCTTTGCAATACTCATGGCTGATTGACTGTCACAAAACATTTTAACTGAGTTTTGAGTATCAATTTTTAGTTCTGTCAACAATTTCTGAATCTACATTCCTTCACAAATTCCCAAAGCAAGAGCTCTATATTCATCTTCTACACTACTTCTTGCTACAATTACTTGTTTTTTACTCCTCCAAGTGACCAAGTTACCCCAAACATAGGAGCAATAGCCAGTTGTAGATTTTTGATCAATTCAGCCCAACTAGCATCAGTATAAAGTTCAACCAATCTATTCGATGACTTTTTGAATAACAAACCATGACGTGGAGTGCCTTTCAAGTATCTCAAAGTTCTGTTCACAACTTTAAGATGTCGTTCACTATGGTTGTTCATATACTGGCTCACAATGCTCATAGAGTATGTGATGTCTGGTCTGGTATGTGAAGGGTCAATTAACTTACCCACAATTCTTTGATACATTCCTTTGTCGACTGGAGTAGTTTCTTCACTTTGGTTTAAGACTAGATTTGGATTCATAGGTGTTGCTGCAGGTCTACACCCTAATCTTTCTTGTCTCTTTTAATAAGTCCAAAATGTATTTTCTCTAAGAAATTACAATACCATCTTTGGATTGAGCCACCTCCATGCCTAGAAAGTATCTCAAGCTTCCCAAGTCTTCGATTTCAAACTCGGTTGCAAACATCCTTTTAAGGTTGAGAATCTTTTCACAATCATTCCCTATAATGATAATATCATCTACATATACAATTAAAATTGTAATTTTATCATTTGAGGATTTCATGAACAAGGTATGATCAGCTTGACATTGATAGTAACCACCTTTAATCAGTGCTTTGGTGAATCTGTCAAACCATGCATGCGTAGATTGTTTTAAACCATACAAAGACTTTCTCAACTTGCATACCATATTACCAATATTAGACCTGTTTTCCATTTCGGGAGGAATTTGCATATAAACTTCTTCTTCATGCTCACCATTTAAGAATGCATTTTTCACATCGAGTTGGTGAAGAGGCCAATCCTGATTTACAGCTAAAGACAACAAAACACGAACAATATTCAATTTCGCGACCGGAGCAAAGGTTTCTTGGTAATCTATACCCTATGATTGGGTAAAGCCTTTAGCAACAAGTCTGGCTTTAAATCGTTCCACACTTTCGTCAGATTTGTACTTAAATGTGAAAATTCATTTGCAACCAACTGGATTCTTTCCATGTGGTAGCCTTGTAAGGGTCCATGTTCCATTGCTTTCAAGAGCTCTAATCTCTTCATCCATTGCCTTTTTCCATTTTGGATCTTTAAGAGCATCATGAATGGTCTGTGGGATTTGAATACTATCCAACTGAGTCACAAATGCTTGATAAGAAGGATGCAATTTCCCATACGCAACATACAATAGGATGATTGGTGCAACTCCTAACACCTTTTCTCTGAGAATTGGTAGGGACAAATCATCAATTAAAGGTGTCATATAAGTAACACTCTCTTAAAGGAAATTCAGTGATAATGAATCTGGTTAAGGTGGTTGGCATTCTTGGTTGTGTGAGGCAGCCTCTCTTCTTCTCTTATAAACAATAGGTGTTCGGTTTTTCAATGCTTCAGGGGTACGAGACTAGTTAG ATGGAACTGATCAGATTTTCGCTGTTTGGTTCTTTGCGAGTGCTTGATTTTGGGAAGAATCACAATGAAGGGAAGATTCCTGAGGGCATTGGGGCTTTGAAGATGCCTTCTGTTGTTTTTCATAATCTGACTGAACTTCTTGTCGTTGATTTGTCTGAAAATTCTTATCTGTTGAGTGATATTCCTAGTGAGATTGGGAAGCTTGAGGAGCTCTCTGGTTTCTATGGTGAAATCCCTTCTTCTTTGTTGGGTTTGAGAAGTTTGATTGTTTTGGATCTTTCTCAGAACAATCTCACTGGGAAACTCCCTGAAATGTTGGGTTCTTCTTTGAAGAATTTGTTGTCTTTTGATGTTTTTGATAATAAGCTTGTGGGGTCCTTTCCAAATGAATTTTGTAGTGGAAAAGGGCTTTTGAGTCTTAGTGTTCATACCCATTTTTTCACTGTGAGTTTGCCTAATTCCTTGAACCAGTGCTTGAATCTTGAGAGGTTTCAAGTTCAGAACAATGCGTTTTCTGGGGATTTTTCTAAAGCTTTTATACTTAATATGTCCCACAATTCTCTTTCTGGTCGTATTTCCGAGTCGAAAAACTGCAAGAAACCGGTCCCTTTGTCCTTAGCAGGCTATAGTCTTACTGGAAGAATTCCTACTTCCCTAGCAGATCTACCCGTGTTTACTTATCTTGATCTTTCTGATAATAATCTCACTAGTTCGATCCCTCAAGGACTTGAGAACTTAAAGCTTGCGCTCTTTAATGTTTTGTTCAATCAACTATTGGGCGCTGTTCCGTTTTCCTTGATTTTGGGGCCTACCACTTCATTTATGGAAGGTGTGGGGTACGAGACTAGTTAG ATGGAACTGATCAGATTTTCGCTGTTTGGTTCTTTGCGAGTGCTTGATTTTGGGAAGAATCACAATGAAGGGAAGATTCCTGAGGGCATTGGGGCTTTGAAGATGCCTTCTGTTGTTTTTCATAATCTGACTGAACTTCTTGTCGTTGATTTGTCTGAAAATTCTTATCTGTTGAGTGATATTCCTAGTGAGATTGGGAAGCTTGAGGAGCTCTCTGGTTTCTATGGTGAAATCCCTTCTTCTTTGTTGGGTTTGAGAAGTTTGATTGTTTTGGATCTTTCTCAGAACAATCTCACTGGGAAACTCCCTGAAATGTTGGGTTCTTCTTTGAAGAATTTGTTGTCTTTTGATGTTTTTGATAATAAGCTTGTGGGGTCCTTTCCAAATGAATTTTGTAGTGGAAAAGGGCTTTTGAGTCTTAGTGTTCATACCCATTTTTTCACTGTGAGTTTGCCTAATTCCTTGAACCAGTGCTTGAATCTTGAGAGGTTTCAAGTTCAGAACAATGCGTTTTCTGGGGATTTTTCTAAAGCTTTTATACTTAATATGTCCCACAATTCTCTTTCTGGTCGTATTTCCGAGTCGAAAAACTGCAAGAAACCGGTCCCTTTGTCCTTAGCAGGCTATAGTCTTACTGGAAGAATTCCTACTTCCCTAGCAGATCTACCCGTGTTTACTTATCTTGATCTTTCTGATAATAATCTCACTAGTTCGATCCCTCAAGGACTTGAGAACTTAAAGCTTGCGCTCTTTAATGTTTTGTTCAATCAACTATTGGGCGCTGTTCCGTTTTCCTTGATTTTGGGGCCTACCACTTCATTTATGGAAGGTGTGGGGTACGAGACTAGTTAG MELIRFSLFGSLRVLDFGKNHNEGKIPEGIGALKMPSVVFHNLTELLVVDLSENSYLLSDIPSEIGKLEELSGFYGEIPSSLLGLRSLIVLDLSQNNLTGKLPEMLGSSLKNLLSFDVFDNKLVGSFPNEFCSGKGLLSLSVHTHFFTVSLPNSLNQCLNLERFQVQNNAFSGDFSKAFILNMSHNSLSGRISESKNCKKPVPLSLAGYSLTGRIPTSLADLPVFTYLDLSDNNLTSSIPQGLENLKLALFNVLFNQLLGAVPFSLILGPTTSFMEGVGYETS
BLAST of Lsi01G019170 vs. Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.2e-54 Identity = 124/289 (42.91%), Postives = 175/289 (60.55%), Query Frame = 1
BLAST of Lsi01G019170 vs. Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.8e-27 Identity = 91/272 (33.46%), Postives = 132/272 (48.53%), Query Frame = 1
BLAST of Lsi01G019170 vs. Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24 Identity = 95/284 (33.45%), Postives = 134/284 (47.18%), Query Frame = 1
BLAST of Lsi01G019170 vs. Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24 Identity = 93/279 (33.33%), Postives = 137/279 (49.10%), Query Frame = 1
BLAST of Lsi01G019170 vs. Swiss-Prot
Match: PXL1_ARATH (Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23 Identity = 86/283 (30.39%), Postives = 135/283 (47.70%), Query Frame = 1
BLAST of Lsi01G019170 vs. TrEMBL
Match: A0A0A0KZH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G572330 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 3.2e-77 Identity = 169/290 (58.28%), Postives = 198/290 (68.28%), Query Frame = 1
BLAST of Lsi01G019170 vs. TrEMBL
Match: B9II43_POPTR (Leucine-rich repeat family protein OS=Populus trichocarpa GN=POPTR_0016s05210g PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58 Identity = 136/290 (46.90%), Postives = 181/290 (62.41%), Query Frame = 1
BLAST of Lsi01G019170 vs. TrEMBL
Match: W9RR91_9ROSA (Probably inactive leucine-rich repeat receptor-like protein kinase OS=Morus notabilis GN=L484_015972 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58 Identity = 135/291 (46.39%), Postives = 184/291 (63.23%), Query Frame = 1
BLAST of Lsi01G019170 vs. TrEMBL
Match: F6HL59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07930 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.6e-58 Identity = 134/289 (46.37%), Postives = 177/289 (61.25%), Query Frame = 1
BLAST of Lsi01G019170 vs. TrEMBL
Match: U5G5Y3_POPTR (Leucine-rich repeat family protein OS=Populus trichocarpa GN=POPTR_0006s05530g PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57 Identity = 134/289 (46.37%), Postives = 176/289 (60.90%), Query Frame = 1
BLAST of Lsi01G019170 vs. TAIR10
Match: AT5G06940.1 (AT5G06940.1 Leucine-rich repeat receptor-like protein kinase family protein) HSP 1 Score: 213.4 bits (542), Expect = 1.8e-55 Identity = 124/289 (42.91%), Postives = 175/289 (60.55%), Query Frame = 1
BLAST of Lsi01G019170 vs. TAIR10
Match: AT1G73066.1 (AT1G73066.1 Leucine-rich repeat family protein) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28 Identity = 92/272 (33.82%), Postives = 133/272 (48.90%), Query Frame = 1
BLAST of Lsi01G019170 vs. TAIR10
Match: AT1G73080.1 (AT1G73080.1 PEP1 receptor 1) HSP 1 Score: 122.9 bits (307), Expect = 3.2e-28 Identity = 91/272 (33.46%), Postives = 132/272 (48.53%), Query Frame = 1
BLAST of Lsi01G019170 vs. TAIR10
Match: AT3G19700.1 (AT3G19700.1 Leucine-rich repeat protein kinase family protein) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-25 Identity = 93/279 (33.33%), Postives = 137/279 (49.10%), Query Frame = 1
BLAST of Lsi01G019170 vs. TAIR10
Match: AT1G72180.1 (AT1G72180.1 Leucine-rich receptor-like protein kinase family protein) HSP 1 Score: 112.5 bits (280), Expect = 4.4e-25 Identity = 95/293 (32.42%), Postives = 143/293 (48.81%), Query Frame = 1
BLAST of Lsi01G019170 vs. NCBI nr
Match: gi|659083277|ref|XP_008442262.1| (PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Cucumis melo]) HSP 1 Score: 298.5 bits (763), Expect = 1.2e-77 Identity = 170/290 (58.62%), Postives = 198/290 (68.28%), Query Frame = 1
BLAST of Lsi01G019170 vs. NCBI nr
Match: gi|778695181|ref|XP_004144659.2| (PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Cucumis sativus]) HSP 1 Score: 296.6 bits (758), Expect = 4.7e-77 Identity = 169/290 (58.28%), Postives = 198/290 (68.28%), Query Frame = 1
BLAST of Lsi01G019170 vs. NCBI nr
Match: gi|743869497|ref|XP_011033297.1| (PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Populus euphratica]) HSP 1 Score: 236.1 bits (601), Expect = 7.5e-59 Identity = 136/290 (46.90%), Postives = 181/290 (62.41%), Query Frame = 1
BLAST of Lsi01G019170 vs. NCBI nr
Match: gi|703133246|ref|XP_010105324.1| (Probably inactive leucine-rich repeat receptor-like protein kinase [Morus notabilis]) HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58 Identity = 135/291 (46.39%), Postives = 184/291 (63.23%), Query Frame = 1
BLAST of Lsi01G019170 vs. NCBI nr
Match: gi|224139842|ref|XP_002323303.1| (leucine-rich repeat family protein [Populus trichocarpa]) HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58 Identity = 136/290 (46.90%), Postives = 181/290 (62.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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