Lsi01G018810 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G018810
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionBED zinc finger,hAT family dimerization domain, putative
Locationchr01 : 21473921 .. 21476663 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCACAAAATGTGGAAGGTTTAAGTGCTATTTTTACCCTTCAACTTTCATGCTTATTTTAATTTAGTTCATGAATTTCCAGTCATTCTACCGTAACTATTAAGCTTAGTCCTTTTCCAAAAAAAAAAAAAAAAACCCCTTAATGTAGCCATATGTGTAGTTCATTTACTAGATGAGTGTGTGTATGTTTGAAGTCACATGTTAAGTAATTCAGCTATCAAGTTTCAAAATAAGATCAAATTTAGGCTAAATAGAAAGTCAATAGTAGAGACTAATGTATTCTTTTTACAAAATAATTGGGGGACTAAAACAGAATGTTTGAAGAATGAAAGACACACTAAAAAGCCCTTCTTTATTTTAAAAACTGAATTTCTAACTTCTAATTAAAGACTTTTAGATTTTTGCTTCCTTTCTTCTTGTTTGAGTTTTAGAAACTGGAGAGATTTATATCTAATTGAATATGGTTAAAATTAAGTTGATGTTGCATTAGTGTTTAAGATTTTTACTATTTTGTTGATGTTGAATGTTGAAAGTTGACCTATCTTATGGCTGGAAATTTATTTTATTGCTTCTTTGACTATTTGATTTGAGTATATATCTTTGTCTTGTTTTTGCTATTCTATTCTTGTCTTATTTTTGCGTTGATTTGGGTTTGCTACTCTATTTAATTTTATTTTTCATAGGATGACTTCAACGTTTTCTAGTCAAACTCTTCATTCAGTTGCATGTGATAATCCTAATCCTTGTGTCACTAGTCCAATAAGAATGTTAGGAAAAAGAAAACCTACTAAAGCAACATCATTGGCTTGGGAACATTTTATTAAGGTAGAAGGATATGATCCTGAACATCCTAGGGCTGCTTGTAAGTACTGTGGGACTACATATGCATGTGATTCCAAGAGAAATGGTACAAAAAATCTAAAAAGACACTTAGAGAAATGTAAGAAATATATAAACAAGTCAGTTGAAGGTGAGGGAGATTCTGAACGTAGTTTGATGAATAATTCGTTCTCTCAAGAAAATTGTAGAACGATGCTTGCTTGTATGTTCATATTAGATGAATTGCCTTTTAAGTTTGTAGAAAGTGAAGGATTTCAAAAATTTTGTCAAGCATTAAATCCGAAGTTTGTAATTCCATCAAGAGTGATTGTTGCAAAGGATTGTTTTCAAATATACATGAGGGAGAAAAAGAGCTTGAAGAGTGCATTAACTCGAAGTAGGCAAAGAGTTTGTTTAACAACTGATACATGGACTTCCGTGCAGAATATTAATTATATGGTCATAACGGCTCATTTCATTGATGGTGATTGGAACTTGCACAAAAGAATTATAAACTTTTGTCAAATAGCTAATCATAAAGGAGATACGATAGGTAGAACAATTGAAAAATGCTTAGAAAGTTGGGGTATTGATAGGCTTTTCACTGTCACTGTTGATAATGCGAGTTCAAATGATCGAGCCATTGCATATTTGGTTAAAAAGTTTAGAGGCAGAAATGGGTTAGTGTTGGATGGTGAATTTATCCATGTTAGATGTTGTGCACATATCCTTAATTTAATTGTTAGTGATGCTTTAAAAGATTTGTACGTGTCTATCATTCGAATTAGAAATGATGTGAAGTATGTTAGGTCGTCTCCTGCAAGATTGCAAATATTTAAAGATTTTGCTAAAGAAAATAGGATGTCAACAAAAAGGTGTCTTATGATGGATGTTCCAACACGATGGAATTCTACTTTCACTATGTTGGATGGAGCAATTAAGTGCCAAAAGACATTTGAAAGATTGGAGGAGCATGACCCAAGATATTTGCCAAAAGACGATATTCCTACTATAAAAAATTGGGATAACGCTAAAGTGTTTGTAGAGTTCTTGAAGACTTTCTCAGACGTTACATTAAAGTTTTCTGCATCTTTTTCTGTGACTTCAAACATATTTTTTCATGAAATGTGTTTGGTCCAAAGAAATAATTCGTGAATATTCATTGTACGAGAATGCACTATTGAGTCAAATGACATCAAGCATGTAGACAAAGTTCAAATATTGGGGTATAACTACAAGTGAGAAGACAAATTTATTATTGTATATCGTTGTAGTTCTTGACTCTAGATATAAGTTGACTTATGTGAGTTATTGTTTTAATGAGTTTTTGGAGGAAGAAAGTGCAAAAAAATGGACAAATAAGGTTGAAGAAGCATTTCGCCGTTTGTGTGATGATTATTATATAAGAATGTTAATGTCAAAAGAACAATATTCACAAGCGCAATCATATACACCTATCGAAGAATCTAGTTGTCAAAGTGAGAGTGAAGTTCCATCTATCTCATCTAATGCATCGAGTGGAACTGGATCCTATAGGGTACGTGCTGCTGTTCATGATAGATTTAAACAAAGTAATAAAAAGGATCCAGATGATGGGAAAACAGAGGTTGCTCGTTATTTAGATGAGGCTCGTATAGAAGATGAAAATTTAAATCTTCTAAATTGGTGGAAATTGAATTCTTCTCGATTTAAGATTATTAGCCAAGTGGCTGGGGACATCAACAGTATTCCTATATCTACAGTGCCATCTGAATCAGCTTTTAACACTGGTGGACGGGTGTTAGATTCTTTTCGAAGTTCACTAACTCCTCAAACTGCAGAGGCACTTATTTGTGCTCAAAATTGGCTTCAATCTAAACCTTTGGATGATATGAGCGAAGAAATTGATGGAGCTGAAGAAATTGATGAATGTAACAAATAA

mRNA sequence

ATGGTTCATGAATTTCCAGTCATTCTACCGATGACTTCAACGTTTTCTAGTCAAACTCTTCATTCAGTTGCATGTGATAATCCTAATCCTTGTGTCACTAGTCCAATAAGAATGTTAGGAAAAAGAAAACCTACTAAAGCAACATCATTGGCTTGGGAACATTTTATTAAGGTAGAAGGATATGATCCTGAACATCCTAGGGCTGCTTGTAAGTACTGTGGGACTACATATGCATGTGATTCCAAGAGAAATGTTCCATCTATCTCATCTAATGCATCGAGTGGAACTGGATCCTATAGGGTACGTGCTGCTGTTCATGATAGATTTAAACAAAGTAATAAAAAGGATCCAGATGATGGGAAAACAGAGGTTGCTCGTTATTTAGATGAGGCTCGTATAGAAGATGAAAATTTAAATCTTCTAAATTGGTGGAAATTGAATTCTTCTCGATTTAAGATTATTAGCCAAGTGGCTGGGGACATCAACAGTATTCCTATATCTACAGTGCCATCTGAATCAGCTTTTAACACTGGTGGACGGGTGTTAGATTCTTTTCGAAGTTCACTAACTCCTCAAACTGCAGAGGCACTTATTTGTGCTCAAAATTGGCTTCAATCTAAACCTTTGGATGATATGAGCGAAGAAATTGATGGAGCTGAAGAAATTGATGAATGTAACAAATAA

Coding sequence (CDS)

ATGGTTCATGAATTTCCAGTCATTCTACCGATGACTTCAACGTTTTCTAGTCAAACTCTTCATTCAGTTGCATGTGATAATCCTAATCCTTGTGTCACTAGTCCAATAAGAATGTTAGGAAAAAGAAAACCTACTAAAGCAACATCATTGGCTTGGGAACATTTTATTAAGGTAGAAGGATATGATCCTGAACATCCTAGGGCTGCTTGTAAGTACTGTGGGACTACATATGCATGTGATTCCAAGAGAAATGTTCCATCTATCTCATCTAATGCATCGAGTGGAACTGGATCCTATAGGGTACGTGCTGCTGTTCATGATAGATTTAAACAAAGTAATAAAAAGGATCCAGATGATGGGAAAACAGAGGTTGCTCGTTATTTAGATGAGGCTCGTATAGAAGATGAAAATTTAAATCTTCTAAATTGGTGGAAATTGAATTCTTCTCGATTTAAGATTATTAGCCAAGTGGCTGGGGACATCAACAGTATTCCTATATCTACAGTGCCATCTGAATCAGCTTTTAACACTGGTGGACGGGTGTTAGATTCTTTTCGAAGTTCACTAACTCCTCAAACTGCAGAGGCACTTATTTGTGCTCAAAATTGGCTTCAATCTAAACCTTTGGATGATATGAGCGAAGAAATTGATGGAGCTGAAGAAATTGATGAATGTAACAAATAA

Protein sequence

MVHEFPVILPMTSTFSSQTLHSVACDNPNPCVTSPIRMLGKRKPTKATSLAWEHFIKVEGYDPEHPRAACKYCGTTYACDSKRNVPSISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIEDENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQTAEALICAQNWLQSKPLDDMSEEIDGAEEIDECNK
Homology
[Close]
BLAST of Lsi01G018810 vs. Swiss-Prot
Match: RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = 1 

Query: 121 KTEVARYLDEA---RIEDENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAF-- 180
           K+E+ +YLDE+   RI++   ++LNWWKLN+ +F  +S++A DI +IP+S V S ++   
Sbjct: 615 KSELEQYLDESLTPRIQE--FDILNWWKLNTLKFPTLSRMARDILAIPMSMVSSGNSIFS 674

Query: 181 -NTGGRVLDSFRSSLTPQTAEALICAQNWLQSKP 209
             TG R+LD +RSSL P+  EAL+CA++WLQ  P
Sbjct: 675 AGTGTRMLDDYRSSLRPEIVEALVCAKDWLQYLP 706

[Close]
BLAST of Lsi01G018810 vs. Swiss-Prot
Match: RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-15
Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 1 

Query: 122 TEVARYLDEA---RIEDENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSES----A 181
           +E+ +YL+EA   RI+D    +L WWKLN+ +F  +S++A D+ +IP+S V S S    A
Sbjct: 646 SELEQYLEEALMPRIQD--FEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSA 705

Query: 182 FNTGGRVLDSFRSSLTPQTAEALICAQNWLQSKP 209
             TG ++LD +RSSL P+T EAL CA++WLQ  P
Sbjct: 706 TATGSQMLDDYRSSLRPETVEALFCAKDWLQYPP 737

[Close]
BLAST of Lsi01G018810 vs. Swiss-Prot
Match: RSLE1_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-14
Identity = 42/94 (44.68%), Postives = 66/94 (70.21%), Query Frame = 1 

Query: 121 KTEVARYLDEA---RIEDENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAF-- 180
           K+E+ +YLDE+   RI++   ++LNWWKLN+ ++  +S++A DI +IP+S V S ++   
Sbjct: 615 KSELEQYLDESLTPRIQE--FDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFS 674

Query: 181 -NTGGRVLDSFRSSLTPQTAEALICAQNWLQSKP 209
             TG R+LD +RSS  P+  EAL+CA++WLQ  P
Sbjct: 675 AGTGTRMLDDYRSSSRPEIVEALVCAKDWLQYLP 706

[Close]
BLAST of Lsi01G018810 vs. Swiss-Prot
Match: DSLE_ARATH (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana GN=HAT PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-12
Identity = 34/85 (40.00%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 121 KTEVARYLDEARIED-ENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGG 180
           K+E+ +YLDE  +   +  ++L+WWK N  ++  +S++A DI SIP+S    +  F+   
Sbjct: 590 KSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEP 649

Query: 181 RVLDSFRSSLTPQTAEALICAQNWL 205
           R +D +++SL P+T EALICA+ WL
Sbjct: 650 REMDEYKTSLRPETVEALICAREWL 674

[Close]
BLAST of Lsi01G018810 vs. Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 4.2e-12
Identity = 35/92 (38.04%), Postives = 62/92 (67.39%), Query Frame = 1 

Query: 115 KDPDDGKT-EVARYLDEARIEDEN-LNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSE 174
           KD D  ++ E+ +Y+ E  ++     ++L+WW+   + + I++Q+A D+ +I +STV SE
Sbjct: 660 KDYDQVESNELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASE 719

Query: 175 SAFNTGGRVLDSFRSSLTPQTAEALICAQNWL 205
           SAF+ GGRV+D +R+ L  +  EALIC ++W+
Sbjct: 720 SAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 751

[Close]
BLAST of Lsi01G018810 vs. TrEMBL
Match: E5GB32_CUCME (Transposase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53
Identity = 116/153 (75.82%), Postives = 128/153 (83.66%), Query Frame = 1 

Query: 77  YACDSKRNVPSISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIE-- 136
           +   S+  +PSISS+     GSY+ RA VHDRFKQSNK   DD KTEV RYLDEARI+  
Sbjct: 193 FGFQSQSEIPSISSS-----GSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCM 252

Query: 137 -DENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQT 196
            DE L+LL WWK+N+SRFKIISQVA DI SIPISTVPSESAF+TGGRVLDSFRSSLTPQT
Sbjct: 253 GDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQT 312

Query: 197 AEALICAQNWLQSKPLDDMSEEIDGAEEIDECN 227
           AEALICAQNW+QSKPLDDM+EEIDGAEEIDE N
Sbjct: 313 AEALICAQNWIQSKPLDDMTEEIDGAEEIDEGN 340

[Close]
BLAST of Lsi01G018810 vs. TrEMBL
Match: D0UIX2_CUCME (Putative transposase OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53
Identity = 116/153 (75.82%), Postives = 128/153 (83.66%), Query Frame = 1 

Query: 77  YACDSKRNVPSISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIE-- 136
           +   S+  +PSISS+     GSY+ RA VHDRFKQSNK   DD KTEV RYLDEARI+  
Sbjct: 526 FGFQSQSEIPSISSS-----GSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCM 585

Query: 137 -DENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQT 196
            DE L+LL WWK+N+SRFKIISQVA DI SIPISTVPSESAF+TGGRVLDSFRSSLTPQT
Sbjct: 586 GDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQT 645

Query: 197 AEALICAQNWLQSKPLDDMSEEIDGAEEIDECN 227
           AEALICAQNW+QSKPLDDM+EEIDGAEEIDE N
Sbjct: 646 AEALICAQNWIQSKPLDDMTEEIDGAEEIDEGN 673

[Close]
BLAST of Lsi01G018810 vs. TrEMBL
Match: A0A0J8E6R9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g067910 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24
Identity = 58/124 (46.77%), Postives = 91/124 (73.39%), Query Frame = 1 

Query: 102 RAAVHDRFKQSNK-KDPDDGKTEVARYLDEARIED-ENLNLLNWWKLNSSRFKIISQVAG 161
           +  +  R+K+    K+  D K+E+ +YLDE  +ED ++ ++L WWK N+SRF  +S +A 
Sbjct: 577 KGIIRARYKKLKATKEDGDSKSEIEKYLDEETVEDVDDFDILKWWKTNTSRFPTLSLIAR 636

Query: 162 DINSIPISTVPSESAFNTGGRVLDSFRSSLTPQTAEALICAQNWLQSKPLDDMSEEIDGA 221
           D+ +IP+STV SESAF+TGGRVLD FRSSLTP+  EAL+C Q+WL++ P+ D+ E+++  
Sbjct: 637 DVLAIPVSTVASESAFSTGGRVLDPFRSSLTPKIVEALVCGQDWLRASPV-DVEEKMEEI 696

Query: 222 EEID 224
           E+++
Sbjct: 697 EKLE 699

[Close]
BLAST of Lsi01G018810 vs. TrEMBL
Match: J3LXK4_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-23
Identity = 64/139 (46.04%), Postives = 89/139 (64.03%), Query Frame = 1 

Query: 87  SISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIED-ENLNLLNWWK 146
           S+ S      GS  ++A + +  K +N    D  KTE  +YL E   ED +  ++L WWK
Sbjct: 573 SVVSEQPRERGSLLMKAVIAENMKSANGAI-DTSKTEAEKYLAEENEEDHKGFDILQWWK 632

Query: 147 LNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQTAEALICAQNWLQ 206
           +NS+RF I+S++A D+ +IPISTV SE AF+TGGRVLD FRSSLTP   E L+C Q+WLQ
Sbjct: 633 INSARFPILSRLARDVLAIPISTVASELAFSTGGRVLDDFRSSLTPSMVERLVCTQDWLQ 692

Query: 207 SKPLDDMSEEIDGAEEIDE 225
           S P   + E+ +   +I+E
Sbjct: 693 SLPPTSIEEDPEKLAQIEE 710

[Close]
BLAST of Lsi01G018810 vs. TrEMBL
Match: E5GBS6_CUCME (Transposase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.3e-23
Identity = 72/185 (38.92%), Postives = 100/185 (54.05%), Query Frame = 1 

Query: 26  DNPNPCVTSPIRMLGKRKPTKATSLAWEHFIKVEGYDPEHPRAACKYCGTTYACDSKRNV 85
           D PNP        L  RK  K  S+ W+HF +++G DP  PRA C      +  DS  N+
Sbjct: 43  DVPNP--------LKIRKNVKQ-SMVWDHFERLKG-DPNDPRAKCLDANIDF--DSNENM 102

Query: 86  PSISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIEDE-NLNLLNWW 145
                          V   + + F+  +    + G +EV  YL EA +  E + ++L WW
Sbjct: 103 REDF-----------VYDTIVEEFEDDSTTPFEQGSSEVDIYLLEANVRTEGDFDILQWW 162

Query: 146 KLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQTAEALICAQNWL 205
           K+NS RF+++  +A DI +I +STV SES F+TGGRV+DS   SL P+T EALIC QNWL
Sbjct: 163 KMNSDRFEVLGHMARDILAISVSTVASESTFSTGGRVVDSSHCSLAPKTVEALICTQNWL 204

Query: 206 QSKPL 210
              P+
Sbjct: 223 NFDPI 204

[Close]
BLAST of Lsi01G018810 vs. TAIR10
Match: AT3G42170.1 (AT3G42170.1 BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 34/85 (40.00%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 121 KTEVARYLDEARIED-ENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGG 180
           K+E+ +YLDE  +   +  ++L+WWK N  ++  +S++A DI SIP+S    +  F+   
Sbjct: 590 KSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEP 649

Query: 181 RVLDSFRSSLTPQTAEALICAQNWL 205
           R +D +++SL P+T EALICA+ WL
Sbjct: 650 REMDEYKTSLRPETVEALICAREWL 674

[Close]
BLAST of Lsi01G018810 vs. TAIR10
Match: AT1G18560.1 (AT1G18560.1 BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06
Identity = 21/84 (25.00%), Postives = 49/84 (58.33%), Query Frame = 1 

Query: 123 EVARYLDEARIEDENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVL 182
           E+ +YL E+ +  +  ++L+WWK+NS R+  +S +A D  ++  ++   E  F   G  +
Sbjct: 569 ELTQYLSESIVPMQT-DVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEI 628

Query: 183 DSFRSSLTPQTAEALICAQNWLQS 207
           D  +  +   + +++IC ++W+++
Sbjct: 629 DKQKYCMPHDSTQSVICIRSWIEA 651

[Close]
BLAST of Lsi01G018810 vs. NCBI nr
Match: gi|261597692|gb|ACX85638.1| (putative transposase [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 1.7e-53
Identity = 116/153 (75.82%), Postives = 128/153 (83.66%), Query Frame = 1 

Query: 77  YACDSKRNVPSISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIE-- 136
           +   S+  +PSISS+     GSY+ RA VHDRFKQSNK   DD KTEV RYLDEARI+  
Sbjct: 526 FGFQSQSEIPSISSS-----GSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCM 585

Query: 137 -DENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQT 196
            DE L+LL WWK+N+SRFKIISQVA DI SIPISTVPSESAF+TGGRVLDSFRSSLTPQT
Sbjct: 586 GDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQT 645

Query: 197 AEALICAQNWLQSKPLDDMSEEIDGAEEIDECN 227
           AEALICAQNW+QSKPLDDM+EEIDGAEEIDE N
Sbjct: 646 AEALICAQNWIQSKPLDDMTEEIDGAEEIDEGN 673

[Close]
BLAST of Lsi01G018810 vs. NCBI nr
Match: gi|307135795|gb|ADN33674.1| (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 218.0 bits (554), Expect = 1.7e-53
Identity = 116/153 (75.82%), Postives = 128/153 (83.66%), Query Frame = 1 

Query: 77  YACDSKRNVPSISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIE-- 136
           +   S+  +PSISS+     GSY+ RA VHDRFKQSNK   DD KTEV RYLDEARI+  
Sbjct: 193 FGFQSQSEIPSISSS-----GSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCM 252

Query: 137 -DENLNLLNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQT 196
            DE L+LL WWK+N+SRFKIISQVA DI SIPISTVPSESAF+TGGRVLDSFRSSLTPQT
Sbjct: 253 GDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQT 312

Query: 197 AEALICAQNWLQSKPLDDMSEEIDGAEEIDECN 227
           AEALICAQNW+QSKPLDDM+EEIDGAEEIDE N
Sbjct: 313 AEALICAQNWIQSKPLDDMTEEIDGAEEIDEGN 340

[Close]
BLAST of Lsi01G018810 vs. NCBI nr
Match: gi|659129276|ref|XP_008464607.1| (PREDICTED: uncharacterized protein LOC103502449 [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-52
Identity = 113/144 (78.47%), Postives = 123/144 (85.42%), Query Frame = 1 

Query: 81  SKRNVPSISSNASSGTGSYRVRAAVHDRFKQSNKKDPDDGKTEVARYLDEARIEDENLNL 140
           S+  +PSIS +     GSY+ R AVH+ FKQSNK   DD KTEV RYLDEARIEDE L+L
Sbjct: 24  SQSGIPSISPS-----GSYKARVAVHNIFKQSNKTCRDDAKTEVTRYLDEARIEDEYLDL 83

Query: 141 LNWWKLNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQTAEALICA 200
           LNWWK+NSSRFKIISQVA DI  IPISTVPSESAF+TGGRVLDSFRSSLTPQTAEALICA
Sbjct: 84  LNWWKVNSSRFKIISQVARDIYIIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICA 143

Query: 201 QNWLQSKPLDDMSEEIDGAEEIDE 225
           QNW+QSKPLDDM+EEID AEEIDE
Sbjct: 144 QNWIQSKPLDDMTEEIDRAEEIDE 162

[Close]
BLAST of Lsi01G018810 vs. NCBI nr
Match: gi|698422519|ref|XP_009780905.1| (PREDICTED: uncharacterized protein LOC104229878 [Nicotiana sylvestris])

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-27
Identity = 76/197 (38.58%), Postives = 113/197 (57.36%), Query Frame = 1 

Query: 41  KRKPTKATSLAWEHFIKVEGYDPEHPRAACKYCGTTYACDSKRN--------VPSISSNA 100
           KRK  K  S+AW +F   EG      +A C++C   Y  D+K +        +P   +N 
Sbjct: 98  KRKMVKERSMAWRYFNXSEGVK----KARCEFCSEEYVADAKHSGTSNLLLHIPKCPTNP 157

Query: 101 SSGTGSYRVRAAVHDRF---KQSNKKDPDDGKTEVARYLDEARIED-ENLNLLNWWKLNS 160
               GS    +         K+  K    D KTE+ +YL E   ED E  N+L WWKLNS
Sbjct: 158 YKAEGSQTTLSFQPQGLTDLKKHKKCGGVDSKTELDKYLGEDVEEDHEKFNILGWWKLNS 217

Query: 161 SRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQTAEALICAQNWLQSKP 220
            RF  ++++A D+ +IPIS+V SESAF+TGGR+LD FRSSLTP+  +AL+C Q+WL+++ 
Sbjct: 218 PRFPTLAEMARDVLAIPISSVASESAFSTGGRILDPFRSSLTPRLVQALVCVQDWLRNES 277

Query: 221 LD--DMSEEIDGAEEID 224
           +    + E++D  E+++
Sbjct: 278 ITPIKIEEDLDNLEQLE 290

[Close]
BLAST of Lsi01G018810 vs. NCBI nr
Match: gi|698427347|ref|XP_009788201.1| (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Nicotiana sylvestris])

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-27
Identity = 77/199 (38.69%), Postives = 120/199 (60.30%), Query Frame = 1 

Query: 34  SPIRMLGKRKPTKATSLAWEHFIKVEGYDPEHP-RAACKYCGTTYACDSKRNVPSISSNA 93
           SP     KRK  +  S AW+HF K +  DP    RA C YC  TYA  +K    + S N 
Sbjct: 31  SPDEAPKKRKVMQPRSDAWKHFEKYD--DPSGAKRAKCNYCQKTYAAATKGTSSASSGNT 90

Query: 94  S---SGTGSYRVRAAVHDRFKQSNKKDPDDG---KTEVARYL-DEARIEDENLNLLNWWK 153
           +   SG GS+  R  +  + +    K+   G   K+E+ RYL ++ + E ++  +L WWK
Sbjct: 91  TATVSGYGSFLKRETMRTKLEFEKHKEVTGGLGTKSELERYLAEDLKPETDDFKILKWWK 150

Query: 154 LNSSRFKIISQVAGDINSIPISTVPSESAFNTGGRVLDSFRSSLTPQTAEALICAQNWLQ 213
           +N  RF I++++A D+  IPIS+V SE +F+ GGR+LD FRSSLTP+  ++LIC Q+WL+
Sbjct: 151 MNEPRFPILAEMARDVLVIPISSVASECSFSMGGRILDLFRSSLTPKLVQSLICLQDWLR 210

Query: 214 SKPLD-DMSEEIDGAEEID 224
           S+P+   + E+++  E+++
Sbjct: 211 SEPIPIKVEEDLEYLEQLE 227

The following BLAST results are available for this feature:
BLAST of Lsi01G018810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RSLE2_ORYSJ1.4e-1546.81Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
RSLE3_ORYSJ9.0e-1546.81Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j... [more]
RSLE1_ORYSJ1.5e-1444.68Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j... [more]
DSLE_ARATH1.9e-1240.00Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana GN=... [more]
TRA1_MAIZE4.2e-1238.04Putative AC transposase OS=Zea mays PE=2 SV=2[more]
BLAST of Lsi01G018810 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GB32_CUCME1.2e-5375.82Transposase OS=Cucumis melo subsp. melo PE=4 SV=1[more]
D0UIX2_CUCME1.2e-5375.82Putative transposase OS=Cucumis melo PE=4 SV=1[more]
A0A0J8E6R9_BETVU2.6e-2446.77Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g067910 PE=4 S... [more]
J3LXK4_ORYBR2.8e-2346.04Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
E5GBS6_CUCME6.3e-2338.92Transposase OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of Lsi01G018810 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G42170.11.1e-1340.00 BED zinc finger ;hAT family dimerisation domain[more]
AT1G18560.12.1e-0625.00 BED zinc finger ;hAT family dimerisation domain[more]
BLAST of Lsi01G018810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|261597692|gb|ACX85638.1|1.7e-5375.82putative transposase [Cucumis melo][more]
gi|307135795|gb|ADN33674.1|1.7e-5375.82transposase [Cucumis melo subsp. melo][more]
gi|659129276|ref|XP_008464607.1|1.9e-5278.47PREDICTED: uncharacterized protein LOC103502449 [Cucumis melo][more]
gi|698422519|ref|XP_009780905.1|2.1e-2738.58PREDICTED: uncharacterized protein LOC104229878 [Nicotiana sylvestris][more]
gi|698427347|ref|XP_009788201.1|2.1e-2738.69PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Nicotia... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR008906HATC_C_dom
IPR003656Znf_BED
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G018810.1Lsi01G018810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003656Zinc finger, BED-typeSMARTSM00614bed5coord: 46..109
score: 0.
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 123..204
score: 3.7
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 111..206
score: 3.49
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 85..222
score: 6.9