Lsi01G018730 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAAACAAAGTTAACCATGGTAACATAAGTCAGTTGCCGCATCCAAACTCTGGAGTTCCTCATTATCCACATAATTATCATGCACCACCTCATCCATATTATCAACCTTACGTAAATGATGCAGCAGTCCAATATTATCCCCCTCCTCCTCAAAATCAATGCTCTTATGTGAATCAGGGGTACCAGCCTCAAGGTCAACAAAATTCTTATGCTCGAGGACAAGATAATAATAAAGGGGGTCGTAAACAAGTGCAGTTTGATCCGATTCCAATGACTTACACAGAGCTTCTGCCACGACTATTTCAGAATAATCAACTAGCACCTGTACCAATAGAACCACTCAACCTCCTCATCCAAAGTGGTATGACCCAAATGCCCGTTGTGATTATCATGCAGGAGTCAATGAGCATTCAATTAAGAATTGTACCGCACTTAAGTACAGGGTATAGGCATTGATCAAGGAGGGATGGCTGAATTTTAATAAGAATAATGGACCTGACGTAAATAATAACCCTCTTCCAAACCACCAAAATCCACAAGTAAATGCTGTAGATGTGGATGAGGTTGGTTTAAGGGATGTCATGAGAATGATAACATCCAAAGAAGAGCTTTTTCGAATTTTGTTTAACAACAGATTGATCGAACAAAGGAATTTGCAAGATAATGTCCTCGTTAGCCAATACGATGACAGTTTATTATGTTCATATCATGCTGGGGCAAAAGGTCACTCTATTGACCAGTGCCCTCATTTCTCTCAGAAGGTACAGGAATTATTAGATTCTCATTTCCTAATAGTCTCACAGAAGGTAGTTGGAGAATCAAAGCGTGAGCATGAAATAGATGCTGCAGAAGAGTTCTCAACAGGTGAATGCTCGAAGGTTTCTCTGGAACGAAAGCCATTAACAATCTTTTATAAGGAAAAACCCAGTACTACCACTTCCAAACCAAAACCAATTACCATACAGGTTCCATCTCCATTTGAGTATTAAAGTTCAAAAGCAGTACTATGGAGTTATGAATACAAGGTACTTTTTGAGTCTGTACCAGTCCCTATAGACAATATTAATGAAATTGGAGGTACAACACGAAGTGGGAAGTGTTATACGCCAGAAGCTTTATTGAAGTACAATAGCAAGGAAAAAGGAAAAGTCAAGCTTAGTGATGTCATTGATTGCAGGATAGAAGAGCCACTGTTGGTGAGAAATCAAGAAGTAGAGGAGCCAGAATCTGAAGATGACATCCAAGAGTTTTTAAGACTTGTAAAATAAAGTGATTATAAAGTAATTGAACAGTTGGACAAAACGCCTGCTAGAATCTCTATTTTGCCTTATTATTATCTTCAGACCTGCATCGCAAAACTCTAATGAATATCCTGAACCAGACTTATGTTCCATCAGACATTACAACAGACAATTTAGATAACATCGTTGGCAGTATAACAGCATCAAGTTCCATAACTTTCACTGATGATGAGATACCGCCGGAAGGCATGGGTCACACAAAGGCTATCCTAGAAATGCCACCATCGTGCACCCAAAAAGAAGTTAGAGGATTTTTGGGAAGGCTAAACTATATCGCAAGGTTTATATCACATCTAACTGCAACATGTGAGCCCATCTTTAAGCTACTTCGTAAGAGTGATGCAGAAGTATGGAATGAAGACTGTCAAAAGGCATTCGAAAAGGTCAAACAATACTTACAGAATCCTCCTGTGCTAGTCCCTCCGACTCCAGGTCGCCCGCTTATTTTGTATCTTACTGTGACAGAAAGTTCAATGGGATGTGTACTGGGACAACATGATGATTCAGCCAAAAAGGAGCAGACTATATATTACTTGAGCAAGAAGTTCACCAGTTGTGAGACAAGATATTCTTTGCTTGAAAAGACGTGTTGTGCACTGGCATGGGCTGCCCGTCGTTTAAGGCCATACATGTTATATTATACGACATGGCTTATCTCAAAGATGGACCCCATAAAGTACATTTTTGAAAAACCGTCTCTTTCAGGCAGAATTGCAAAGTGGCAAGTTCTCTTATCTGAATATGATATAGTCTATGTTACTCGAAAGTCAATCAAAGGAAGTACACTAGCTGACTACTTAGCTGAGCAACCCATAGATGACTATGAGCCAATGAAATTTGATTTTCCTGATGAATTGGTCTCTTCCTTAGCAAAAGTAGAAGAAATACCGAATTCAAAGGCATGGACAATGCTGTTTGATGGAGCCTCCAATGAATTAGGTCATGGAATAGGTGTCATTTTGATTTCACCAGAAGGAAAGTTATTCCCTTTGACAGCCAAGTTAAATTTTGATTGTACTCATAATGTGGCCGAATACGAAGCTTGCTCTATGGGTATCCAGGCAACATTAGATATGAAAATCAAGAAGCTGCGAGTTTTAGGAGATTCCATGTTGGTAATTCACCAGTTAAGGGAAGAATGGGAAACAAGAGACGCTAAACTTCTCCCATACAAAAAGCTAATAATGGAATTGTCGCAAAAGTTCGATAAAGTTACTTTTGGTTATCTACCAAGGGAAAGTAATCAGGTAGCAGATGCTTTAGCCACATTGGGGGTCTTATTTAGCATAGACCTCAATCAGGAGGTACAACCTATCAAAATTGAAAAGCGAGATGCTCTGGCCACTTGCATGGCTATTGAAGAAGAGTCTGATGGTAAACCGTGGTATTTTGACATTAAAAAGTTTATTAAATGTTGAGAATATCCATTGAATGCCTCAGAGAATGATAAGGGCACACTTAGAAAGTTAGCAATGAAATTCTTCTTGAACGGAGAAGTACTTTACAAAATAAATCATGACATGGTACTCTTAAGATGTGTAGATGCGACAGAGGCAAATAAAATCATGAAAGAAACTCACGAAGGAGTTTGCGGAACTCGTGCAAATGGACATATGATGGCTAGACAAGTATTAAGATCTGGTTATTACTGGTTAACTATGGAAAAAGATTGCACTAAGCATGCGAGAGAGTGCCACAAATGTCAGATATATGCAGACAAAGCCCACGCACCTGCATCTCAGTTACATGTTATGACAGCTCTTTGGCCTTTTTCTATGTGGGGAATGGATGTGATAGGCCCCATCGAGCCTAAAGCCTCGAATGGACATCGTTTTATTTTGGTAGCAATTGATTACTTCACCAAGTGGGTGGAAGCAATGTCTTATCGAGAGGTGACAAAGACAGTTGTCATTAAGTTCATAAAAAAAGAGATTATTTGCCGTTATGGTCTTCCTGAAACTATAGTGACTGATAACGCTCGAAATTTGAATAATAAATTGATGAAGGAGTTGTGTGAACAGTTCAAGATCAAGCACCTCAACTCAACTCCCTATAGGCCAAAAATGAATGGAGCAGTGGAAGCCGCTAACAAGAATATAAAAAGAATCGTGCAAAAGATGACGGTAACATATAAGGATTGGCATGAAACGCTTCCTTTTGCACTACATGGTTATCGCACATCAGTTCGGACTTCAACTGGGGCAACGCCATTTTCTCTAGTCTACGGTATGGAGGTTGTTCTTCCTATTGAGGTAGAGATTCCATCCTTGCGAGTTCTTATGGATGCTAAACTAAAAGAAGCAGAATAGGTCCAAAACCGCTATGAACAACTAAATTTTGTGGAAGAAAAAAGACTAACAGCATTATGCAGAGGTCAACTATATCAAAAACGGATGACAAGAGCTTAAGACAAGAAGGTACGCCCCAGAGTTTTCAGAGCAGGAGATCTGGTTTTAAGGCGATTTCTCCCGTTTCAGAAAGATCACCGAGGGAAATGGACTCCAAATTATGAAGGACCCTATGTAGTAGAAAAAGCTTTCTTTGGAGGAGTTTTGATCTTGACCAATATGGATGGGGACCGACTGCCTAATCCAGTAAACTCGGATCATGTGTGA ATGATAAACAAAGTTAACCATGGTAACATAAGTCAGTTGCCGCATCCAAACTCTGGAGTTCCTCATTATCCACATAATTATCATGCACCACCTCATCCATATTATCAACCTTACGTAAATGATGCAGCAGTCCAATATTATCCCCCTCCTCCTCAAAATCAATGCTCTTATGTGAATCAGGGGTACCAGCCTCAAGATGTGGATGAGGTTGGTTTAAGGGATGTCATGAGAATGATAACATCCAAAGAAGAGCTTTTTCGAATTTTGTTTAACAACAGATTGATCGAACAAAGGAATTTGCAAGATAATGTCCTCGTTAGCCAATACGATGACAGTTTATTATGTTCATATCATGCTGGGGCAAAAGGTCACTCTATTGACCAGTGCCCTCATTTCTCTCAGAAGGTACAGGAATTATTAGATTCTCATTTCCTAATAGTCTCACAGAAGGTAGTTGGAGAATCAAAGCGTGAGCATGAAATAGATGCTGCAGAAGAGTTCTCAACAGACAATATTAATGAAATTGGAGGTACAACACGAAGTGGGAAGTGTTATACGCCAGAAGCTTTATTGAAGTACAATAGCAAGGAAAAAGGAAAAGTCAAGCTTAGTGATGTCATTGATTGCAGGATAGAAGAGCCACTGTTGGTGAGAAATCAAGAAGTAGAGGAGCCAGAATCTGAAGATGACATCCAAGAGTTTTTAAGACTTACTTATGTTCCATCAGACATTACAACAGACAATTTAGATAACATCGTTGGCAGTATAACAGCATCAAGTTCCATAACTTTCACTGATGATGAGATACCGCCGGAAGGCATGGGTCACACAAAGGCTATCCTAGAAATGCCACCATCGTGCACCCAAAAAGAAAAAGATCACCGAGGGAAATGGACTCCAAATTATGAAGGACCCTATGTAGTAGAAAAAGCTTTCTTTGGAGGAGTTTTGATCTTGACCAATATGGATGGGGACCGACTGCCTAATCCAGTAAACTCGGATCATGTGTGA ATGATAAACAAAGTTAACCATGGTAACATAAGTCAGTTGCCGCATCCAAACTCTGGAGTTCCTCATTATCCACATAATTATCATGCACCACCTCATCCATATTATCAACCTTACGTAAATGATGCAGCAGTCCAATATTATCCCCCTCCTCCTCAAAATCAATGCTCTTATGTGAATCAGGGGTACCAGCCTCAAGATGTGGATGAGGTTGGTTTAAGGGATGTCATGAGAATGATAACATCCAAAGAAGAGCTTTTTCGAATTTTGTTTAACAACAGATTGATCGAACAAAGGAATTTGCAAGATAATGTCCTCGTTAGCCAATACGATGACAGTTTATTATGTTCATATCATGCTGGGGCAAAAGGTCACTCTATTGACCAGTGCCCTCATTTCTCTCAGAAGGTACAGGAATTATTAGATTCTCATTTCCTAATAGTCTCACAGAAGGTAGTTGGAGAATCAAAGCGTGAGCATGAAATAGATGCTGCAGAAGAGTTCTCAACAGACAATATTAATGAAATTGGAGGTACAACACGAAGTGGGAAGTGTTATACGCCAGAAGCTTTATTGAAGTACAATAGCAAGGAAAAAGGAAAAGTCAAGCTTAGTGATGTCATTGATTGCAGGATAGAAGAGCCACTGTTGGTGAGAAATCAAGAAGTAGAGGAGCCAGAATCTGAAGATGACATCCAAGAGTTTTTAAGACTTACTTATGTTCCATCAGACATTACAACAGACAATTTAGATAACATCGTTGGCAGTATAACAGCATCAAGTTCCATAACTTTCACTGATGATGAGATACCGCCGGAAGGCATGGGTCACACAAAGGCTATCCTAGAAATGCCACCATCGTGCACCCAAAAAGAAAAAGATCACCGAGGGAAATGGACTCCAAATTATGAAGGACCCTATGTAGTAGAAAAAGCTTTCTTTGGAGGAGTTTTGATCTTGACCAATATGGATGGGGACCGACTGCCTAATCCAGTAAACTCGGATCATGTGTGA MINKVNHGNISQLPHPNSGVPHYPHNYHAPPHPYYQPYVNDAAVQYYPPPPQNQCSYVNQGYQPQDVDEVGLRDVMRMITSKEELFRILFNNRLIEQRNLQDNVLVSQYDDSLLCSYHAGAKGHSIDQCPHFSQKVQELLDSHFLIVSQKVVGESKREHEIDAAEEFSTDNINEIGGTTRSGKCYTPEALLKYNSKEKGKVKLSDVIDCRIEEPLLVRNQEVEEPESEDDIQEFLRLTYVPSDITTDNLDNIVGSITASSSITFTDDEIPPEGMGHTKAILEMPPSCTQKEKDHRGKWTPNYEGPYVVEKAFFGGVLILTNMDGDRLPNPVNSDHV
BLAST of Lsi01G018730 vs. TrEMBL
Match: A0A151UBR9_CAJCA (Pol polyprotein OS=Cajanus cajan GN=KK1_021024 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.0e-13 Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 1
BLAST of Lsi01G018730 vs. TrEMBL
Match: A0A151T038_CAJCA (Transposon Ty3-G Gag-Pol polyprotein (Fragment) OS=Cajanus cajan GN=KK1_022821 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.9e-13 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of Lsi01G018730 vs. TrEMBL
Match: A0A151RXS0_CAJCA (Gypsy retrotransposon integrase-like protein 1 OS=Cajanus cajan GN=KK1_031029 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.9e-13 Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 1
BLAST of Lsi01G018730 vs. TrEMBL
Match: A0A0S3RTY8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G112500 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12 Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of Lsi01G018730 vs. TrEMBL
Match: Q2HW89_MEDTR (Integrase, catalytic region; Ribonuclease H OS=Medicago truncatula GN=MtrDRAFT_AC147774g2v1 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12 Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 1
BLAST of Lsi01G018730 vs. NCBI nr
Match: gi|1012365588|gb|KYP76770.1| (Pol polyprotein [Cajanus cajan]) HSP 1 Score: 84.3 bits (207), Expect = 4.3e-13 Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 1
BLAST of Lsi01G018730 vs. NCBI nr
Match: gi|955327347|ref|XP_014632648.1| (PREDICTED: uncharacterized protein K02A2.6-like [Glycine max]) HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 1
BLAST of Lsi01G018730 vs. NCBI nr
Match: gi|1012349226|gb|KYP60416.1| (Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanus cajan]) HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of Lsi01G018730 vs. NCBI nr
Match: gi|955309670|ref|XP_014627683.1| (PREDICTED: uncharacterized protein LOC106797532 [Glycine max]) HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 1
BLAST of Lsi01G018730 vs. NCBI nr
Match: gi|1012336034|gb|KYP47346.1| (Gypsy retrotransposon integrase-like protein 1 [Cajanus cajan]) HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13 Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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