Lsi01G018660 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G018660
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTransposon protein, putative, CACTA, En/Spm sub-class
Locationchr01 : 20695158 .. 20697138 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTGAAGCAGATTTATTAATGTTCGGGATAGTCCTTATGAAGGAATATCTATCTTTAAACTAGTTGGTCGTCCTATGAGACCAATCAAACAAACAAAAAGGCTAACGATAGAAGAGTGGAGACAAGTCCATCTCTATATTTTAAAGAATTGTGATGATGTCCTCCCATATATTAGGTATGTAAAAGTTCTCTCGTTGATAATTTTTTAAAATATTTTAAAATAGAATATAAAGTAACTTTTTAATTTTTTAGTGAGCACATACAAGGATTGCAACATCTTGATCCTAGAAATGCACCAAGAAAGCATGATAAAGAGTTTGTAGAATGGTTTGAAGATCATGTAAGTGAGAAAAGATAATAGTTACTATATTTATTTATATATACAATTTCTACTCATTCTTAAATATGATATTAAATATGATAGTATTTTCTTTGTAGGTTACTAAATTATATATTGATGGAAGCAATAGAGTTGACAAACAGTTATTAGATTTATCTCAAGGTCCATCACAAGAAGTAACATGCTACAAAGGGTATATTATTAATGGATTTAGATTTCGTATCAAGGATGGTGATGATTTAAGAAAAACACAAAATAGTGGGATAGTAGTGAGAGGAACTGATGATCAAGAGTACTTCGGTGTACTGCATGATATTATTGAATTGCAATATATGGGCGGAAATAAAGCAGTTTTGTTTAAATGTAAATGGTGGAATATCAATAGTCTCGGTAAAGGAATTAGAATTGATGATCATGGACTAACTAGTGTGAATATGATGTACACATTGGCTACAAATGAGCCATTTGTATTAGCATGTTAATCTGAACAAGTTGTTTACCTTGAAGATAGAAGAAATCCGATTTGGTATTTTGTGTTGAAAGTTGATCCAAGAGATTATTACAATATCCCTTTGATCATAGATGAATATTGTCAAGAAGAAGATGACGAAGAAGACGACGATAGAGGAATTTAATTCTTAATTTTTTTTTTGTCTGTCGTTTATGTTAGGTAATCTCTTTTCTAAACTTTATAATATATGATATCTCTTGTTTCTTATACTAATACTCAATTTTTATTATGTTATTTATCTAGCTTTCTTTTTCCAATAAGTTTACTATTTGTGTAAAGGATGAAAAAAATAAGAACGAGATTCAACAACAATAATAGTATAGATAGTCGCGAGAATACTACAATTGCATCTACATCTAATCAAATAGTTGATGATCAACAATCTTCAACGAAATCTAAAGCAAAAGTTGGTTTAGAAGCTTCATCATCATTTACAGGAGAAATTGGATCAACTACTAGTCATGAAAAGTTTCTTAATAGAGGTAACATTTTTTTTTATAATATATATATTATTTATGTTTGATTTGGTACTAACTTACTTTCTCTTCTTCTTTTTTACTTTAGAATCTTCTTCTAGAGAAAGAAGAGTACGTGGTCCCACACGCAATCTCAAACTAGTGAAACTACCTCATGGGATTAGATTTGAAGTATCATGGAATTAAAGATAATGCTGATATCTTTAAAAGCCAATGCACTATCATAGCTAGACAAGTCAACTTTACTCCTTTACAAGTGAAAAGTTGGAGAGATATTGATACAACAATAAAAAAAAAGCTATTTGAGCTTATATNGGAAGAAACGACCAGTTGGAGATAATGCTGATATCTTTAAAAGCCAATGCACTATCATAGCTAGACAAGTCAACTTTACTCCTTTACAAGTGAAAAGTTGGAGAGATATTGATACAACAATAAAAAAAAAGCTATTTGAGCTTATATTGGTATGTGAAAAAATAAATATAGTTTTTTTCTTTAATTTACTTTTTACATAATTATACTACTACTACCATTTTCTTTGCAGGAACAATTTAAAGTTGAAGGTCACGAGACTTCAGTATTGCTTCAAATTCACCGATCTTATAATAATTGGAGAGATAGTTTAAAGAAAAAATGGTTATACAAATAT

mRNA sequence

ATGATTGAGCACATACAAGGATTGCAACATCTTGATCCTAGAAATGCACCAAGAAAGCATGATAAAGAGTTTGTAGAATGGTTTGAAGATCATGTTACTAAATTATATATTGATGGAAGCAATAGAGTTGACAAACAGTTATTAGATTTATCTCAAGGTCCATCACAAGAAGTAACATGCTACAAAGGGTATATTATTAATGGATTTAGATTTCGTATCAAGGATGGTGATGATTTAAGAAAAACACAAAATAGTGGGATAGTAGTGAGAGGAACTGATGATCAAGAGTACTTCGGTGTACTGCATGATATTATTGAATTGCAATATATGGGCGGAAATAAAGCAGTTTTGTTTAAATGTAAATGGTGGAATATCAATAGTCTCGGTAAAGGAATTAGAATTGATGATCATGGACTAACTAGTGTGAATATGATGTACACATTGGCTACAAATGAGCCATTTGTATTAGCATGTTAATCTGAACAAGTTGTTTACCTTGAAGATAGAAGAAATCCGATTTGGTATTTTGTGTTGAAAGTTGATCCAAGAGATTATTACAATATCCCTTTGATCATAGATGAATATTGTCAAGAAGAAGATGACGAAGAAGACGACGATAGAGGAATTTAATTCTTAATTTTTTTTTTGTCTGTCGTTTATGTTAGGATGAAAAAAATAAGAACGAGATTCAACAACAATAATAGTATAGATAGTCGCGAGAATACTACAATTGCATCTACATCTAATCAAATAGTTGATGATCAACAATCTTCAACGAAATCTAAAGCAAAAGTTGGTTTAGAAGCTTCATCATCATTTACAGGAGAAATTGGATCAACTACTAGTCATGAAAAGTTTCTTAATAGAGAATCTTCTTCTAGAGAAAGAAGAGTACGTGGTCCCACACGCAATCTCAAACTAGTGAAACTACCTCATGGGATTAGATTTGAAGTATCATGGAATTAAAGATAATGCTGATATCTTTAAAAGCCAATGCACTATCATAGCTAGACAAGTCAACTTTACTCCTTTACAAGTGAAAAGTTGGAGAGATATTGATACAACAATAAAAAAAAAGCTATTTGAGCTTATATNGGAACAATTTAAAGTTGAAGGTCACGAGACTTCAGTATTGCTTCAAATTCACCGATCTTATAATAATTGGAGAGATAGTTTAAAGAAAAAATGGTTATACAAATAT

Coding sequence (CDS)

ATGATTGAGCACATACAAGGATTGCAACATCTTGATCCTAGAAATGCACCAAGAAAGCATGATAAAGAGTTTGTAGAATGGTTTGAAGATCATGTTACTAAATTATATATTGATGGAAGCAATAGAGTTGACAAACAGTTATTAGATTTATCTCAAGGTCCATCACAAGAAGTAACATGCTACAAAGGGTATATTATTAATGGATTTAGATTTCGTATCAAGGATGGTGATGATTTAAGAAAAACACAAAATAGTGGGATAGTAGTGAGAGGAACTGATGATCAAGAGTACTTCGGTGTACTGCATGATATTATTGAATTGCAATATATGGGCGGAAATAAAGCAGTTTTGTTTAAATGTAAATGGTGGAATATCAATAGTCTCGGTAAAGGAATTAGAATTGATGATCATGGACTAACTAGTGTGAATATGATGTACACATTGGCTACAAATGAGCCATTTGTATTAGCATGTTAA

Protein sequence

MIEHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYKGYIINGFRFRIKDGDDLRKTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKWWNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVLAC
Homology
[Close]
BLAST of Lsi01G018660 vs. TrEMBL
Match: A0A0J8CU51_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039840 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34
Identity = 74/156 (47.44%), Postives = 102/156 (65.38%), Query Frame = 1 

Query: 3   EHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYK 62
           EH Q L+H +PRN  ++H   F +W  D V  L+  GS  +D+ + +L   PS+ V  Y 
Sbjct: 156 EHKQMLEHENPRNVEQRHRMRFAKWIYDRVRSLHEKGS--IDEDIYNLVCFPSRVVRRYA 215

Query: 63  GYIINGFRFRIKDGDDLRKTQNSGIVVRGTD--DQEYFGVLHDIIELQYMGGNKAVLFKC 122
           GYI+NGFRF      + RKTQNSG++VRG D  D+EY+GVL D+ E+ Y  GN+A  FKC
Sbjct: 216 GYIVNGFRFHTDGRCENRKTQNSGVMVRGDDVSDKEYYGVLKDVFEVLYPSGNRAFGFKC 275

Query: 123 KWWNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVL 157
            W+++   GKG ++DDHGL SVN  Y+L T+E +VL
Sbjct: 276 VWFDVRHHGKGYKVDDHGLISVNKRYSLKTDEVYVL 309

[Close]
BLAST of Lsi01G018660 vs. TrEMBL
Match: A0A0J8CYR5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039840 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-33
Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 1 

Query: 8   LQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYKGYIIN 67
           L+H +PRN  ++H   F +W  D V  L+  GS  +D+ + +L   PS+ V  Y GYI+N
Sbjct: 2   LEHENPRNVEQRHRMRFAKWIYDRVRSLHEKGS--IDEDIYNLVCFPSRVVRRYAGYIVN 61

Query: 68  GFRFRIKDGDDLRKTQNSGIVVRGTD--DQEYFGVLHDIIELQYMGGNKAVLFKCKWWNI 127
           GFRF      + RKTQNSG++VRG D  D+EY+GVL D+ E+ Y  GN+A  FKC W+++
Sbjct: 62  GFRFHTDGRCENRKTQNSGVMVRGDDVSDKEYYGVLKDVFEVLYPSGNRAFGFKCVWFDV 121

Query: 128 NSLGKGIRIDDHGLTSVNMMYTLATNEPFVL 157
              GKG ++DDHGL SVN  Y+L T+E +VL
Sbjct: 122 RHHGKGYKVDDHGLISVNKRYSLKTDEVYVL 150

[Close]
BLAST of Lsi01G018660 vs. TrEMBL
Match: A0A0J8B0Y1_BETVU (Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_016490 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.1e-33
Identity = 65/141 (46.10%), Postives = 100/141 (70.92%), Query Frame = 1 

Query: 22  KEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYKGYIINGFRFRIKDGDDLRK 81
           + F +WF++ V  LY +  ++  K LL LS+GP+Q VT Y GY++NG+RFRI++ D   +
Sbjct: 58  ENFKKWFKNEVAFLYENNKSKEMKHLLSLSRGPTQYVTSYTGYVVNGYRFRIENRDQTLR 117

Query: 82  TQNSGIVVRGT-----DDQEYFGVLHDIIELQYMGGNKAVLFKCKWWNINSLGKGIRIDD 141
           TQNSG+VV G      ++ +Y+GV+ DI+EL+Y+GGN+ VLF+CKWW++    +G++ID+
Sbjct: 118 TQNSGVVVIGNIGNEDENIDYYGVVMDILELKYLGGNRIVLFRCKWWDVYDKVRGVKIDE 177

Query: 142 HGLTSVNMMYTLATNEPFVLA 158
           +G  SVN    L  +EPF+LA
Sbjct: 178 YGYVSVNGNKQLKGDEPFILA 198

[Close]
BLAST of Lsi01G018660 vs. TrEMBL
Match: Q8S6M8_ORYSJ (Putative TNP2-like transposon protein OS=Oryza sativa subsp. japonica GN=OSJNBa0073L01.21 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-32
Identity = 65/137 (47.45%), Postives = 98/137 (71.53%), Query Frame = 1 

Query: 21   DKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYKGYIINGFRFRIKDGDDLR 80
            +K+F+ WF++ + + +    + V + LL LS+GP + +TC+ GY +NGFR+R +  D  R
Sbjct: 886  NKKFINWFKEKIYQQHQHDKSEVMEDLLSLSRGPLKNITCFTGYDMNGFRYRTERRDSRR 945

Query: 81   KTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKWWNINSLGKGIRIDDHGLT 140
             TQNSG++V G DD EY+GVL +I+E+QY+GG +  LF+C W ++ +  +GIRID +GLT
Sbjct: 946  CTQNSGVMVLG-DDVEYYGVLTEILEIQYLGGRRVPLFRCNWVDVFNKDRGIRIDKYGLT 1005

Query: 141  SVNMMYTLATNEPFVLA 158
            SVN+   L T+EPFVLA
Sbjct: 1006 SVNLQRLLQTDEPFVLA 1021

[Close]
BLAST of Lsi01G018660 vs. TrEMBL
Match: Q7G3C6_ORYSJ (Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica GN=LOC_Os10g21980 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-32
Identity = 65/137 (47.45%), Postives = 98/137 (71.53%), Query Frame = 1 

Query: 21   DKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYKGYIINGFRFRIKDGDDLR 80
            +K+F+ WF++ + + +    + V + LL LS+GP + +TC+ GY +NGFR+R +  D  R
Sbjct: 886  NKKFINWFKEKIYQQHQHDKSEVMEDLLSLSRGPLKNITCFTGYDMNGFRYRTERRDSRR 945

Query: 81   KTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKWWNINSLGKGIRIDDHGLT 140
             TQNSG++V G DD EY+GVL +I+E+QY+GG +  LF+C W ++ +  +GIRID +GLT
Sbjct: 946  CTQNSGVMVLG-DDVEYYGVLTEILEIQYLGGRRVPLFRCNWVDVFNKDRGIRIDKYGLT 1005

Query: 141  SVNMMYTLATNEPFVLA 158
            SVN+   L T+EPFVLA
Sbjct: 1006 SVNLQRLLQTDEPFVLA 1021

[Close]
BLAST of Lsi01G018660 vs. NCBI nr
Match: gi|1012170473|ref|XP_015965588.1| (PREDICTED: uncharacterized protein LOC107489344 isoform X2 [Arachis duranensis])

HSP 1 Score: 181.8 bits (460), Expect = 9.3e-43
Identity = 77/156 (49.36%), Postives = 114/156 (73.08%), Query Frame = 1 

Query: 3    EHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYK 62
            +H + L+  +PRN  ++HD+EF +WFE HVT LY +   +V  QLL L++GP++E TCYK
Sbjct: 845  KHKEILEEENPRNVQKRHDQEFSDWFESHVTCLYKEKDKQVTHQLLCLARGPAREATCYK 904

Query: 63   GYIINGFRFRIKDGDDLRKTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKW 122
            GY  NGF F  KD ++ RKTQ+SG++V+    +EY+GV+ DI+EL YM  NK V+FKC W
Sbjct: 905  GYKANGFIFHTKDCENHRKTQSSGVMVKLNCGKEYYGVIEDIVELSYMNDNKVVMFKCLW 964

Query: 123  WNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVLAC 159
            W++++ G+G+++D++G+T VN   TL T E FV+AC
Sbjct: 965  WDVDNYGRGVKVDEYGVTLVNKGRTLKTREVFVMAC 1000

[Close]
BLAST of Lsi01G018660 vs. NCBI nr
Match: gi|1012170469|ref|XP_015965587.1| (PREDICTED: uncharacterized protein LOC107489344 isoform X1 [Arachis duranensis])

HSP 1 Score: 181.8 bits (460), Expect = 9.3e-43
Identity = 77/156 (49.36%), Postives = 114/156 (73.08%), Query Frame = 1 

Query: 3    EHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYK 62
            +H + L+  +PRN  ++HD+EF +WFE HVT LY +   +V  QLL L++GP++E TCYK
Sbjct: 879  KHKEILEEENPRNVQKRHDQEFSDWFESHVTCLYKEKDKQVTHQLLCLARGPAREATCYK 938

Query: 63   GYIINGFRFRIKDGDDLRKTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKW 122
            GY  NGF F  KD ++ RKTQ+SG++V+    +EY+GV+ DI+EL YM  NK V+FKC W
Sbjct: 939  GYKANGFIFHTKDCENHRKTQSSGVMVKLNCGKEYYGVIEDIVELSYMNDNKVVMFKCLW 998

Query: 123  WNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVLAC 159
            W++++ G+G+++D++G+T VN   TL T E FV+AC
Sbjct: 999  WDVDNYGRGVKVDEYGVTLVNKGRTLKTREVFVMAC 1034

[Close]
BLAST of Lsi01G018660 vs. NCBI nr
Match: gi|1012170476|ref|XP_015965589.1| (PREDICTED: uncharacterized protein LOC107489344 isoform X3 [Arachis duranensis])

HSP 1 Score: 181.8 bits (460), Expect = 9.3e-43
Identity = 77/156 (49.36%), Postives = 114/156 (73.08%), Query Frame = 1 

Query: 3   EHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYK 62
           +H + L+  +PRN  ++HD+EF +WFE HVT LY +   +V  QLL L++GP++E TCYK
Sbjct: 769 KHKEILEEENPRNVQKRHDQEFSDWFESHVTCLYKEKDKQVTHQLLCLARGPAREATCYK 828

Query: 63  GYIINGFRFRIKDGDDLRKTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKW 122
           GY  NGF F  KD ++ RKTQ+SG++V+    +EY+GV+ DI+EL YM  NK V+FKC W
Sbjct: 829 GYKANGFIFHTKDCENHRKTQSSGVMVKLNCGKEYYGVIEDIVELSYMNDNKVVMFKCLW 888

Query: 123 WNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVLAC 159
           W++++ G+G+++D++G+T VN   TL T E FV+AC
Sbjct: 889 WDVDNYGRGVKVDEYGVTLVNKGRTLKTREVFVMAC 924

[Close]
BLAST of Lsi01G018660 vs. NCBI nr
Match: gi|1021581968|ref|XP_016180369.1| (PREDICTED: uncharacterized protein LOC107622839 isoform X2 [Arachis ipaensis])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 76/156 (48.72%), Postives = 112/156 (71.79%), Query Frame = 1 

Query: 3   EHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYK 62
           +H + L+  +PRN  ++HD+EF +WFE HVT LY     +V  QLL L++GP++E  CYK
Sbjct: 279 KHKEILEKENPRNVQKRHDQEFSDWFESHVTSLYKKKDEQVTHQLLCLARGPAREAICYK 338

Query: 63  GYIINGFRFRIKDGDDLRKTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKW 122
           GY  NGF F  KD ++ RKTQ+SG++V+    +EY+GV+ DI+EL YM  NK V+FKC W
Sbjct: 339 GYKANGFIFHKKDCENHRKTQSSGVMVKLNCRKEYYGVIEDIVELSYMNDNKVVMFKCLW 398

Query: 123 WNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVLAC 159
           W++++ G+G+++D++G+T VN   TL T E FV+AC
Sbjct: 399 WDVDNYGRGVKVDEYGVTLVNKGRTLKTKEVFVMAC 434

[Close]
BLAST of Lsi01G018660 vs. NCBI nr
Match: gi|1021581966|ref|XP_016180368.1| (PREDICTED: uncharacterized protein LOC107622839 isoform X1 [Arachis ipaensis])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 76/156 (48.72%), Postives = 112/156 (71.79%), Query Frame = 1 

Query: 3   EHIQGLQHLDPRNAPRKHDKEFVEWFEDHVTKLYIDGSNRVDKQLLDLSQGPSQEVTCYK 62
           +H + L+  +PRN  ++HD+EF +WFE HVT LY     +V  QLL L++GP++E  CYK
Sbjct: 312 KHKEILEKENPRNVQKRHDQEFSDWFESHVTSLYKKKDEQVTHQLLCLARGPAREAICYK 371

Query: 63  GYIINGFRFRIKDGDDLRKTQNSGIVVRGTDDQEYFGVLHDIIELQYMGGNKAVLFKCKW 122
           GY  NGF F  KD ++ RKTQ+SG++V+    +EY+GV+ DI+EL YM  NK V+FKC W
Sbjct: 372 GYKANGFIFHKKDCENHRKTQSSGVMVKLNCRKEYYGVIEDIVELSYMNDNKVVMFKCLW 431

Query: 123 WNINSLGKGIRIDDHGLTSVNMMYTLATNEPFVLAC 159
           W++++ G+G+++D++G+T VN   TL T E FV+AC
Sbjct: 432 WDVDNYGRGVKVDEYGVTLVNKGRTLKTKEVFVMAC 467

The following BLAST results are available for this feature:
BLAST of Lsi01G018660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi01G018660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0J8CU51_BETVU1.5e-3447.44Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039840 PE=4 S... [more]
A0A0J8CYR5_BETVU2.7e-3347.02Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039840 PE=4 S... [more]
A0A0J8B0Y1_BETVU6.1e-3346.10Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_0164... [more]
Q8S6M8_ORYSJ2.3e-3247.45Putative TNP2-like transposon protein OS=Oryza sativa subsp. japonica GN=OSJNBa0... [more]
Q7G3C6_ORYSJ2.3e-3247.45Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. jap... [more]
BLAST of Lsi01G018660 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi01G018660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1012170473|ref|XP_015965588.1|9.3e-4349.36PREDICTED: uncharacterized protein LOC107489344 isoform X2 [Arachis duranensis][more]
gi|1012170469|ref|XP_015965587.1|9.3e-4349.36PREDICTED: uncharacterized protein LOC107489344 isoform X1 [Arachis duranensis][more]
gi|1012170476|ref|XP_015965589.1|9.3e-4349.36PREDICTED: uncharacterized protein LOC107489344 isoform X3 [Arachis duranensis][more]
gi|1021581968|ref|XP_016180369.1|1.3e-4148.72PREDICTED: uncharacterized protein LOC107622839 isoform X2 [Arachis ipaensis][more]
gi|1021581966|ref|XP_016180368.1|1.3e-4148.72PREDICTED: uncharacterized protein LOC107622839 isoform X1 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025312DUF4216
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G018660.1Lsi01G018660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025312Domain of unknown function DUF4216PFAMPF13952DUF4216coord: 105..157
score: 3.5
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 8..157
score: 1.4
NoneNo IPR availablePANTHERPTHR10775:SF94SUBFAMILY NOT NAMEDcoord: 8..157
score: 1.4