Lsi01G018630 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G018630
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_377
Locationchr01 : 20424885 .. 20426657 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGTGAAAAAATTCAAAAAAAATTGAGAGAAGCTCCCGCCACAAATTCGTTATTCACAATCAATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACGTATGATATTCAATCCTATTCCCATTCCTCTTTCTTTCTCATTTCCTCTGTTCTGTTATATCATTCAAACTCATCGTCCTTTTTTTTTGTTTTGCTTTCGATCTCTGTTTCTGTGTTTTGTTGGCTGTGCAGACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATGTAATGGTTCTCATTCTTATCTGTTTTACTTAATTTCTGTTCTTTTATTTTGTTCTTCTTGTATGTTGTTTGTTTTTTTTATTAGGTATTTTAGGCTCTGTTTTTGTTTGCGCATTTTCTGCTGTGTGTGATCGATACTGTGCCTTGGTTTGAGTAAAGGAACTATTCATTTGGTTCGGTGTTTAGGATTTTTTTTTTTTTTTTTTGAATTAGTTTCTGGATGACTTGAATTTAATCGTATTCTGTTCCTGAGACTGGTAGCCGAATTTAGTTTGTGTTCAATAATGCTTGGCTGATTATTTCCTTTTATTACCGATGTTTGGCTATCGGATCCTTCTTGTTGTCTTGTTTCTTCTTCGGTATCAACTTCAATCTGATCAGAATCTTGAAAACTCTACTTCCTCCTCCTGATTACTTATCCGTCTGTCACTGAATTTCAATTATATGGATTTCAAGTCTCAGTACTTCGATCGATGAAGCGTTTAGTTGCTAATTAGTAAATACTTTGTTGATTTTAAGTGTAAAACACTTTTAAGTCTAAGGAATTCCTCACAGGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGAAATGAAGATACGGCAAGTGATTGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGTAATTAGTAATTCGTTCTTCCCTCTCACAACTCCTCACCACGTTGCCTCTAAAGTCATGCTTTTATCCAGTGCTTCCAATTCTCACATTTACTGTACACGGTAGGATCATCTATGTACTCTCATCTCTCATCATAATTTATATCCGAAAGGTTTAAAGATAGAAATTGGGAATGAATTTAATTCTTTCATATGTTGATCCATACTTTCAAGCTTATGTATGGATTAGGATCAGTTTTATGTTAATAAAATTGATTTGAGTTCTGTTTCGCCTTTTTTGGCAGGCTGTTGAAACTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAAGATCCCTATAGATACAAGGTAACACTCAACTCCCTGCAGTTTCCTCTCTAA

mRNA sequence

AGAGAGTGAAAAAATTCAAAAAAAATTGAGAGAAGCTCCCGCCACAAATTCGTTATTCACAATCAATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGAAATGAAGATACGGCAAGTGATTGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGCTGTTGAAACTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAAGATCCCTATAGATACAAGGTAACACTCAACTCCCTGCAGTTTCCTCTCTAA

Coding sequence (CDS)

ATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGAAATGAAGATACGGCAAGTGATTGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGCTGTTGAAACTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAAGATCCCTATAGATACAAGGTAACACTCAACTCCCTGCAGTTTCCTCTCTAA

Protein sequence

MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKVTLNSLQFPL
Homology
[Close]
BLAST of Lsi01G018630 vs. TrEMBL
Match: A0A0A0L130_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G165910 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.2e-89
Identity = 186/236 (78.81%), Postives = 203/236 (86.02%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
           MA FPS LERTVASALLLLS  P    SPP TPIS+DEWLFEE  I GKCSRE+SAF ++
Sbjct: 1   MAEFPSPLERTVASALLLLSISP----SPPSTPISEDEWLFEEKNIEGKCSREMSAFCEH 60

Query: 61  SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
           SNS SSILT SD SS T   E LL S SP R +LKLNVVRKSRSK++RISE +N S TD+
Sbjct: 61  SNSSSSILTTSDASSHTPPLERLLFSTSPCRHQLKLNVVRKSRSKLVRISENRNLSSTDE 120

Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
           VTLSSGS SSETTSCLSSSSSVVTS PIH +VTRA+KKLEMIRHAWRK+Q+ASAHMRRRA
Sbjct: 121 VTLSSGSASSETTSCLSSSSSVVTSTPIHRLVTRAEKKLEMIRHAWRKKQIASAHMRRRA 180

Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
           EAILSYLS GCSSE+KIR+VIGDSPDTSKALR+LLKLEEIKRSGTGGRQDPY YK+
Sbjct: 181 EAILSYLSDGCSSEVKIRKVIGDSPDTSKALRILLKLEEIKRSGTGGRQDPYMYKI 232

[Close]
BLAST of Lsi01G018630 vs. TrEMBL
Match: A0A061F408_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024640 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 117/248 (47.18%), Postives = 149/248 (60.08%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
           MA FPS LERTVASALLLLSTPP            + + + EE +     S         
Sbjct: 1   MASFPSPLERTVASALLLLSTPPSKLMISCCDGERRGKIMSEERLSLMSSSE-------- 60

Query: 61  SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
           S SC+S LT +D+ S  R K  ++ +++    E+KL VV+K RSKI R S   N      
Sbjct: 61  SKSCTSSLT-TDQLSSRRQKLRIIAAVA-RCHEIKLKVVKKRRSKIYRSSN--NRKIPSF 120

Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
            +L S ++++E  SCLSS SS ++SA I    T+A+K     +   ++    S HMRRRA
Sbjct: 121 KSLISSNMATEM-SCLSSGSSGISSARIQLKTTKAEKMQAAKQR--KRRSGGSTHMRRRA 180

Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV---- 240
           EAIL  LSGGC SE+ IR+V+GDSPDTSKALRMLLK EE+KRSGTGG++DPY Y V    
Sbjct: 181 EAILKLLSGGCFSEVNIRRVLGDSPDTSKALRMLLKQEEVKRSGTGGQKDPYIYTVINFD 233

Query: 241 -TLNSLQF 244
            T N L F
Sbjct: 241 ATFNCLFF 233

[Close]
BLAST of Lsi01G018630 vs. TrEMBL
Match: A0A067K1C2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21088 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.6e-32
Identity = 109/242 (45.04%), Postives = 142/242 (58.68%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
           M  FPS++ERTVASALLLLS   P  PS P         + +E       S E  +F   
Sbjct: 2   MTLFPSSIERTVASALLLLSETKPLSPSSPQPGFDGGSVIVKERNENKSGSEESLSFVSN 61

Query: 61  SNS--CSSILTGSDESSETRAKEPL-LLSISPHRDELKLNVVRKSRSKIIRISEKQNFSY 120
           S+   CS++ +GS  S + +    L ++SI     E+K  VVRK RS++    +++    
Sbjct: 62  SSKSQCSTLTSGSSSSMKIQKAHKLRMVSIVARSHEMKFKVVRKRRSEVCWSFDQRKIVL 121

Query: 121 TDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVT-RAKKKLEMIRHAWRKEQVA---S 180
                +SS S S +  SCLSS+SS  +SA   +V     + ++E      +   V    S
Sbjct: 122 ALPAKVSSRSESPDD-SCLSSTSSAASSARSRYVSNGTTRNQMEPKPERAKVNSVCGPGS 181

Query: 181 AHMRRRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYR 236
           A+MRR+AEAIL  LS G SSE++IRQV+GDSPDTSKALRMLLK EEIKRSGTGGRQDPY 
Sbjct: 182 AYMRRQAEAILKLLSRGSSSEVRIRQVLGDSPDTSKALRMLLKQEEIKRSGTGGRQDPYI 241

[Close]
BLAST of Lsi01G018630 vs. TrEMBL
Match: A0A067DGW7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0380632mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32
Identity = 110/240 (45.83%), Postives = 147/240 (61.25%), Query Frame = 1 

Query: 4   FPSTLERTVASALLLLSTPPPTPP-SPPFTPISQDEWLFEENIIGGKCSREISAFFDYSN 63
           FPS LERTVASALLLLS    +P  S P      +  L  ++    + S  + +  D S 
Sbjct: 6   FPSPLERTVASALLLLSVSNQSPSLSSPLFDTDGELLLKSKSSSRDEESVSLLSSGD-SK 65

Query: 64  SCSSILTGSD-ESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQ----NFSY 123
            C S +T  D  SSE RA +  ++++     E+KL V+RKSRSK+ +  +      +   
Sbjct: 66  RCVSTVTSEDASSSEIRAHKLRIIAVVARCHEVKLKVMRKSRSKMSQKFKADKPPPSRQL 125

Query: 124 TDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVV-TRAKKKLEMIRHAWRKEQVASAHM 183
           T+  T SSGS+S+E  SCLSS++S V+S+   + V  R K ++       R+     +H+
Sbjct: 126 TEKTTASSGSLSTEAGSCLSSTASAVSSSQSRYSVGARGKPRV-------RRTSSGPSHI 185

Query: 184 RRRAEAILSYLSG-GCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYK 236
            RRAEAIL  LS  GCSSE+KIRQ +GDSPDTSKALRMLL+ +E+KRSGTGGRQDPY YK
Sbjct: 186 ERRAEAILKLLSSHGCSSEIKIRQALGDSPDTSKALRMLLRSDEVKRSGTGGRQDPYIYK 237

[Close]
BLAST of Lsi01G018630 vs. TrEMBL
Match: V4S742_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005740mg PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-31
Identity = 107/243 (44.03%), Postives = 145/243 (59.67%), Query Frame = 1 

Query: 4   FPSTLERTVASALLLLSTP--PPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFF--D 63
           FPS LERTVASALLLLS    PP+  SP F     D  L  ++    +    +S     D
Sbjct: 6   FPSPLERTVASALLLLSVSDQPPSLTSPLF---DTDGELLLKSKSSSRDEESVSLLSSGD 65

Query: 64  YSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQ----NF 123
                S++ +    SSE RA +  ++++     E+KL V+RKSRSK+ +  +      + 
Sbjct: 66  SKRCVSTVTSEYTSSSEIRAHKLRIIAVVARCHEVKLKVMRKSRSKMSQKFKADKPPPSP 125

Query: 124 SYTDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHH-VVTRAKKKLEMIRHAWRKEQVASA 183
             T+  T SSGS+S+E  SCLSS++S V+S+   + V  R K ++       R+     +
Sbjct: 126 QPTEKTTASSGSLSTEAGSCLSSTASAVSSSQSRYSVAARGKPRV-------RRTSSGPS 185

Query: 184 HMRRRAEAILSYLSG-GCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYR 237
           H+ RRAEAIL  LS  GCSSE+KIR  +GDSPDTSKALRMLL+ +E+KRSGTGGRQDPY 
Sbjct: 186 HIERRAEAILKLLSSHGCSSEIKIRHALGDSPDTSKALRMLLRSDEVKRSGTGGRQDPYI 238

[Close]
BLAST of Lsi01G018630 vs. TAIR10
Match: AT3G57440.1 (AT3G57440.1 unknown protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 101/250 (40.40%), Postives = 135/250 (54.00%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKC---SREISAF 60
           MA +PS +ERTVAS+LLLLS        P F    + E + E + +   C   S  +S  
Sbjct: 1   MATYPSVIERTVASSLLLLSY------GPVFFSPKRSESVEESSYVRKWCHEGSSNLSLM 60

Query: 61  FDYSNS--CSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNF 120
              S S  C S L+       +  +E  +         +     RK RS++I  S   NF
Sbjct: 61  LGSSGSRSCGSALSSDGSFGMSEDREFKINYTGDPFRLMNFKTARKRRSQVIWGSF--NF 120

Query: 121 SYTD-------DVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWR- 180
             T        DV LS+ SV S+  SCLS+ SS V+S     +  R +K  E +R   + 
Sbjct: 121 KPTHLKMNPVCDV-LSTCSVDSKDESCLSTGSSEVSSVE-SRIKVRNQKSNEKLRGGGKT 180

Query: 181 -KEQVASAHMRRRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTG 237
            KE   S+ +RRRA+ IL +LS   SSE+ IRQ++GDSPDTSKALRMLLK+EE+KR GTG
Sbjct: 181 MKESSRSSSIRRRAKDILEFLSSESSSEVHIRQILGDSPDTSKALRMLLKMEEVKRFGTG 240

[Close]
BLAST of Lsi01G018630 vs. NCBI nr
Match: gi|449463366|ref|XP_004149405.1| (PREDICTED: uncharacterized protein LOC101216264 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 4.6e-89
Identity = 186/236 (78.81%), Postives = 203/236 (86.02%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
           MA FPS LERTVASALLLLS  P    SPP TPIS+DEWLFEE  I GKCSRE+SAF ++
Sbjct: 1   MAEFPSPLERTVASALLLLSISP----SPPSTPISEDEWLFEEKNIEGKCSREMSAFCEH 60

Query: 61  SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
           SNS SSILT SD SS T   E LL S SP R +LKLNVVRKSRSK++RISE +N S TD+
Sbjct: 61  SNSSSSILTTSDASSHTPPLERLLFSTSPCRHQLKLNVVRKSRSKLVRISENRNLSSTDE 120

Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
           VTLSSGS SSETTSCLSSSSSVVTS PIH +VTRA+KKLEMIRHAWRK+Q+ASAHMRRRA
Sbjct: 121 VTLSSGSASSETTSCLSSSSSVVTSTPIHRLVTRAEKKLEMIRHAWRKKQIASAHMRRRA 180

Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
           EAILSYLS GCSSE+KIR+VIGDSPDTSKALR+LLKLEEIKRSGTGGRQDPY YK+
Sbjct: 181 EAILSYLSDGCSSEVKIRKVIGDSPDTSKALRILLKLEEIKRSGTGGRQDPYMYKI 232

[Close]
BLAST of Lsi01G018630 vs. NCBI nr
Match: gi|659121677|ref|XP_008460771.1| (PREDICTED: uncharacterized protein LOC103499533 [Cucumis melo])

HSP 1 Score: 333.2 bits (853), Expect = 3.9e-88
Identity = 187/236 (79.24%), Postives = 202/236 (85.59%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
           MA FPS LERTVASALLLLS  P    SPP TPIS+DEWLFE+N I GKCSREISAF DY
Sbjct: 1   MAEFPSPLERTVASALLLLSISP----SPPSTPISEDEWLFEKN-IEGKCSREISAFCDY 60

Query: 61  SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
           SN+ SSILT SD SS T   E LL    P R +L LNVVRKSRSK++RISE +N S TD+
Sbjct: 61  SNTSSSILTTSDASSHTPPLERLLFLTYPCRHQLMLNVVRKSRSKLVRISENRNLSSTDE 120

Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
           VTLSSGS SSETTSCLSSSSSVVTSAPIH +VTRA+KKLEMIRHAWRK+Q+ASAHMRRRA
Sbjct: 121 VTLSSGSASSETTSCLSSSSSVVTSAPIHRLVTRAEKKLEMIRHAWRKKQIASAHMRRRA 180

Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
           EAILSYLS GCSSE+KIRQVIGDSPDTSKALR+LLKLEEIKRSGTGGRQDPY YK+
Sbjct: 181 EAILSYLSDGCSSEVKIRQVIGDSPDTSKALRILLKLEEIKRSGTGGRQDPYMYKI 231

[Close]
BLAST of Lsi01G018630 vs. NCBI nr
Match: gi|731399880|ref|XP_010653777.1| (PREDICTED: uncharacterized protein LOC104880103 [Vitis vinifera])

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34
Identity = 114/244 (46.72%), Postives = 144/244 (59.02%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCS-------RE 60
           M  FP  LERT ASALLLLS+   T  SP  +P    E   E N  GG  S       R 
Sbjct: 1   MEEFPCPLERTAASALLLLSSSTTTT-SPSLSPKLDFE--DEPNKDGGSNSNSDDSGKRM 60

Query: 61  ISAFFDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQ 120
            S     S +CSS L+    S E  A+   ++++    +E+KL VVRKSRSK  R    +
Sbjct: 61  ESVVLSDSKACSSSLSSDGSSEEIHARRLRIVAVVAWCNEMKLKVVRKSRSKNYRSCHHR 120

Query: 121 NFSYTDDVTLSSGSVSSET-TSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVA 180
             +  +   ++SGSVS+ T  SCLSS SS  +  P   V      K  +     R +Q+ 
Sbjct: 121 KITSGNPAKMASGSVSANTEVSCLSSGSSARSRYPSGGV---GIGKAGLSSGDVRGKQLG 180

Query: 181 SAHMRRRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPY 237
           S HMRRR EAIL  LSGGCS+E++IR+V+GDSPDTSKALRMLLKLEE+KR+G GGRQDPY
Sbjct: 181 SVHMRRRGEAILRLLSGGCSTEVRIRRVLGDSPDTSKALRMLLKLEEVKRTGEGGRQDPY 238

[Close]
BLAST of Lsi01G018630 vs. NCBI nr
Match: gi|590635902|ref|XP_007028737.1| (Uncharacterized protein TCM_024640 [Theobroma cacao])

HSP 1 Score: 151.4 bits (381), Expect = 2.1e-33
Identity = 117/248 (47.18%), Postives = 149/248 (60.08%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
           MA FPS LERTVASALLLLSTPP            + + + EE +     S         
Sbjct: 1   MASFPSPLERTVASALLLLSTPPSKLMISCCDGERRGKIMSEERLSLMSSSE-------- 60

Query: 61  SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
           S SC+S LT +D+ S  R K  ++ +++    E+KL VV+K RSKI R S   N      
Sbjct: 61  SKSCTSSLT-TDQLSSRRQKLRIIAAVA-RCHEIKLKVVKKRRSKIYRSSN--NRKIPSF 120

Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
            +L S ++++E  SCLSS SS ++SA I    T+A+K     +   ++    S HMRRRA
Sbjct: 121 KSLISSNMATEM-SCLSSGSSGISSARIQLKTTKAEKMQAAKQR--KRRSGGSTHMRRRA 180

Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV---- 240
           EAIL  LSGGC SE+ IR+V+GDSPDTSKALRMLLK EE+KRSGTGG++DPY Y V    
Sbjct: 181 EAILKLLSGGCFSEVNIRRVLGDSPDTSKALRMLLKQEEVKRSGTGGQKDPYIYTVINFD 233

Query: 241 -TLNSLQF 244
            T N L F
Sbjct: 241 ATFNCLFF 233

[Close]
BLAST of Lsi01G018630 vs. NCBI nr
Match: gi|645230892|ref|XP_008222140.1| (PREDICTED: uncharacterized protein LOC103322054 [Prunus mume])

HSP 1 Score: 147.9 bits (372), Expect = 2.3e-32
Identity = 116/248 (46.77%), Postives = 147/248 (59.27%), Query Frame = 1 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
           MA FPS LER VASALL+L+T PP         +  D  L  E      C RE S   D 
Sbjct: 1   MAPFPSPLERVVASALLVLATTPPK------LCLDDDRELVRERSKIENC-RESSVSGDS 60

Query: 61  SNSCSSILTGSDESSET-RAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTD 120
           + S SS++T  + S+E  RA++  +++++  R E+KL  VR+SRSK       Q    T 
Sbjct: 61  NKSFSSLITTCEVSTEEIRARKIRIVALAALRREMKLKGVRRSRSKT------QTSWKTV 120

Query: 121 DVTLSSGSVSSETT---SCLSSSSSVVTSAPIHHVVT-----RAKKKLEMIRHA--WRKE 180
             + ++ S  SETT   SC+S+SSS  +S+   H        R   KL M+R     RK 
Sbjct: 121 SGSSATASFRSETTTESSCVSTSSSAASSSRSRHASWSAWNYRGATKLSMVREEPMKRKR 180

Query: 181 QVASAHMRRRAEAILSYLSGGCS-SEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGR 237
              SAHMRR+AEAIL  LSGGC  SE+KIRQ IGDSPDTSKALRMLLKLE++KRSG GGR
Sbjct: 181 LSFSAHMRRKAEAILKLLSGGCCFSEVKIRQTIGDSPDTSKALRMLLKLEKVKRSGIGGR 235

The following BLAST results are available for this feature:
BLAST of Lsi01G018630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi01G018630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L130_CUCSA3.2e-8978.81Uncharacterized protein OS=Cucumis sativus GN=Csa_4G165910 PE=4 SV=1[more]
A0A061F408_THECC1.5e-3347.18Uncharacterized protein OS=Theobroma cacao GN=TCM_024640 PE=4 SV=1[more]
A0A067K1C2_JATCU3.6e-3245.04Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21088 PE=4 SV=1[more]
A0A067DGW7_CITSI4.7e-3245.83Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0380632mg PE=4 ... [more]
V4S742_9ROSI2.3e-3144.03Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005740mg PE=4 SV=1[more]
BLAST of Lsi01G018630 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57440.11.2e-2640.40 unknown protein[more]
BLAST of Lsi01G018630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449463366|ref|XP_004149405.1|4.6e-8978.81PREDICTED: uncharacterized protein LOC101216264 [Cucumis sativus][more]
gi|659121677|ref|XP_008460771.1|3.9e-8879.24PREDICTED: uncharacterized protein LOC103499533 [Cucumis melo][more]
gi|731399880|ref|XP_010653777.1|1.1e-3446.72PREDICTED: uncharacterized protein LOC104880103 [Vitis vinifera][more]
gi|590635902|ref|XP_007028737.1|2.1e-3347.18Uncharacterized protein TCM_024640 [Theobroma cacao][more]
gi|645230892|ref|XP_008222140.1|2.3e-3246.77PREDICTED: uncharacterized protein LOC103322054 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G018630.1Lsi01G018630.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34799FAMILY NOT NAMEDcoord: 1..237
score: 1.7