Lsi01G017640 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G017640
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 16508720 .. 16515091 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCGTCAATTCCTACGGCATAGAAGTAAAGAAAGCAAACGCAATTCTCAAGTATTAACAACTTAGGAAAATCGCTAACCTATTTCGATTCATCGAAATGTGTTTGATTCTTGTTATGATCTCAAGATTTTCCAGCCATTTGTCGAGCACCTACAAGAACTCCAGCGAGTACTTCCGCTGCGCCGTTGATCAATCCTCGCTTCGTGTTTCTGATCGAAAGTGCTATAGTCATCACTCTTTTCGCTAAATCTGGACAGTTCTCTGCTTAGGATCCGAGCAAGAAGAATTTTGTCCATCGATTCTCGTAAGTTCCCTCAATTTCTTCTCCTAATTTCTTATCCAGATGTATTATATCAGCAAAAATGGAAGGGATCATCTAGGCGTAATTTTTGTTTGCATTTTTTTTTAAAAAAAAATTGTGTTCTCATGGGCTTTTGATTTAATTTTGTTGTAATGTATAGCAGAGATGGAAGAATTGGGATGAATTTAGATAAAATGTTTGAAATCCAATACTAAAATCAATTAGTTTGTATATGCTCCTAAACTGTTTGTTGAAATGCCTAAGAGAGATCTGCAGTTTGGGTTTCTTCATCTACATTGACATCTCTTTCACTTTGATGGAAATAACATTTTTTCATTTCCCCTTTTTTTGTTTTGAAATTTATCCTTCCCTAATTTGTTTTGTTCATTTTTTCTAATTTTCCTTTGGCTCAGGTTCTTATCCTTTGGAAGAGATTCGAGGCAAACAAGGTTTGTTTTCTTCTATTCGTTTAATTTTGTTTTGATCGATTTTTCTATTTTAAAAAAAAAAACTGTTGATCTGCAATTTTCTATATTGTGACCTCTTGTGTCGTGATTTTCTTATCAAATTGTTTAGTGATACTTGATAGTCTTTTGAAACTATCAGAGTGAGTAAACTAAAAGGGAATATAAACCATAAGGTGATTTGTTGTGATCTCTTGACCCACCTACACACAAAATAAACCAACATATTCAAAAGACTACAAAGATAAAATTAGTTTTTAAGTAGGTTTAGAAAGTAGGTTTTAGATTCAAAGGGGATTTTTCAATTATTAAGCAACCTTTTTAAAAATCAGTTTGCACACTTGATATTTTAAACTACATATCCGTTTACTTTTCTTTTGGTAAATCAGTTCTAGGATGATTCATCTAGAAGAAATAAGAAATGCATTTTTTTCATTAGAATGATGTTTAAAATGTTTCATATTGGAAGTCTATTCAAGGTATATATTTTATAAAAGCAGCAAGAACAACATGATTTTTGAAGGGAATAGTATTGTAACAACATTACATGAACAACTTAAAAATTTCCTTACAAGTATGGTGACAATTCCATCCTAAAGAGCTGTTTAGTGTAAAATAAACTGATCATTATGAAAAAAATTCAGCAGCCCATACAAAGCTCTTAGATAAAATACTCTTTCAGTCCTTGAGTTTTTTCTAGTTCAACCTAGCTTTGAGAAATAGTTTAGTTTAGTTTTCTGAGTTTCTTTATGTAGCCTATTCAATTATGCGTTAATGTTATTATTCATATGGTTGTGTTACATCTCATTTTACACCATCTAGTGAAGAAGCAAGGAAAGGGCACCTAATTTCTGATCCAAGAAGTCATGGGTAGATTCTCTTCCTTTCTTTGAAGCATTAGGTCAAGTTGTCAATTTAGATACTCTCTTATAGATGTTCCCGATATAGTTAATTCATCTTATACCTTATATCCAATTGTTTCTTGTATTATGGACATAATTTTCATCTAGGATCCAATTTATTTGGGGTAAGTTTTAGGTTCTAAAACTAAGTGATTGATGGTACACTTGAAATGAACGAGGATAAGATTTTTGTACGAGTATTTGGACCGGAGAAACACGGACGTGTTCGTGGTTGTGGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGTCTAACATACGCGATCTTGAGTGTCGCCTTAATGAGTCCGAACAACGTCTTCAAGAATCTGAACAACGAAGAAAAGTTGAGGTAGAAGTACTTAAGCATCAAATGAGCGAATTAGAAAATTGTTTTGAAGATAGATTTAAAAAAATGATGGCAGAGATGCATAAAGAATTTGTTTCTAGTTGATCGACTGTAGTTTGATGTTATAGAATTTCGATAGTCTTTTTTGTGTACTTTTAAGACATATAAGTTTACTTTCATCTATGTTATTGCCTATTTTTCTATTCTATTTCTTATACTTTGTAATTCAAGGTGATTAGTAAGAACAACCTTTCGAGATTTGTCAATAAATGTAAAAGGNGTACTTTTAAGACATATAAGTTTACTTTCATCTATGTTATTGCCTATTTTTCTATTCTATTTCTTATACTTTGTAATTCAAGGTGATTAGTAAGAACAACCTTTCGAGATTTGTCAATAAATGTAAAAAGCCTTTGTGAGAGAATTTTCGAAGGATATATAATTGTTGATAAATAAGTTTTTAAGAAGGTTTTAAAATTTTTGAAAATAGCATTATAAGCCTTTAAAAATAATGAAAACCTTCGAAAAAGACCATTTGAAAAACCTTTGAAAAAAACCAATTATTGAAGATATATGACCTTTGAAAAATAATAACATTTGAAGGTTGATAAACTTTTGAAAAGTAATAATTTTCGAAGGTTAGCTAAACCTTTGAAAAAGTTTTTACGACGGGATCTATTTCGAACCTTTTCAAAGGTTGAGATAATCTTTGAAAAAAAGTGTATCAAAGGTTTATTAAAGGTTTTTTCAAAGGTTCTGACCTTCGAAAATGGTTAACTTTTTTGTAGTGTTCATTGTTGTATATATTTCAATTACACAAATATGTGTGTAATACAATTTAGAAGGACAAGCAGACAACTAGATATAGTATATAAATATCATATATTATTCTTATAATCAATTTCTCTAAGCAATATCAATTACAACATATACCTTCCAAATTTACTAAACTTCTCCTTGATTTACAACAGAATGAAGTATATCAATTGTAAATTTTGCTCCTCTGGGCAAAATAATATTTTCTTTTTCAAAATCTTTAATCAAGTCTACAGGACTTAATATATATTATTTGATTTTTCACTTTAACCATTTGAATTTTAGAAAACGTAATACCATATTGTTTATTTTTAAGTATAATATGTATAGATGTGCTATATGCAAAACATAAATATTAATTATTCTTTTTCTCTTCAAGAGATTCAAAAGAAATCTAAATATCTCACATACAAATGGGTAAAACAAATAATCATCTCTTCAAGAGATTCTAAAAATTTGTAACATCCAAATAATATCATGTTTAGGAGTTAAAATGATAAGTTATGATCTCTTCGAGAGATTCAAACAAATTCTCAAAGTTTGCTACACCACATCATTTTTCTTTTCATTATTAAGGATTTTAATTTTTCAAAAAAAATAAAAAAAAACTCTTAATGTACGACATGTACAAGATTCTTGTCTCTTTTGCATCACATTTGAAATATGAAATTTTCATATAAATATGTGTGGTTTTAATAGAATAATTACTTCTTCCTCAATTAAGATAATTTCAATTACAATTATTAAATATTGCAACATTCACTTCAAAGAAGTCGAAATTCATTATTTTGTATAAATCATATGCTCATTTTGATTTATGCAACTTTAGGTGAATTGAATCAAAATTAGCTTTAGGAAGAATAATAAACTATTATGCATAACTTTCAAATTTTACCGTGAGAGAATTCAACTAAATATATATAATCACTATATATAAAGTTTTAACGTTTATAAAATATACATAAAAATAATCTAAATATTCGATAATCCAATAAATTTTAATAGGCAAATAAAAATTTGACTAATTCAACTCCCAGGTTAGTTCCCAGGTAGAGGTGTTCCTTATGATCAATATCTCAGCCTAGCCAAAACCATCCTTAGACAGAGTTCCCTTATTGTCAAATTTTTATTTCTAATTCATTAATCTTTTAATTAAGAGTTAATTAATAGATTAATATTAATGAATCTAAGTGAATTATTAAGGTTTATTTTCATCTTATAAAAACTAATTCACTTAAGGAATAATCTTTAGTATTTTAAATCTTAAACCTTTCAAAATAAAATTAAAGATAGTCTTGGATATTTATTCTCATATTTGAAAAATAAAAGATAATATTATTAGAAGATAATCTTCACATATAAAAGATAATATGTATAGGAGAGAATCATAATAATCCCTATTAGAAAACTTCTAACTGTTAGAAATATGAAAAATAAACACATCCTAATTCCATTTTCCTATTCAAATATATGAAAAATATAAACTAATTAGGAAACAACTCAATTGAATTTAAAATAAGACCATAATTTATAACCTTATTCTAAATGACATACTTTAAGCAAAGTATCAAACAATTTTAAACATACATCACATGCATGATAATTGATGGTCCTAAGAGATTTAAGACAATTTAAATTACATTAATTTGAATTTAGAACTCAAAAACCTTTTAAAAAAATTATTTGCTCAACTTACACAATTGCTTTGAAGAAGTATTCAATCCACAAATTCAAAATTGTTTATGACCTACAACAGTAAACATACATATGCATATTTGTATATACTTCAAAAAAAAATTTAAACTAAAACGCAAATAATCTATGTTTAATATGCATCATATGCACCTCAAAGGCATAAAATAAAAAGTTAAATGCTCAATAATTTATATAAATTTTCAATAATAATGCTTAATTACTTTATACCAAGCTGCATTCAAGAGTCCATGTACACAAGTGCACGCTTAACACAAATGTAAATAAAAGCAGAGATTAAACTTTATTTCAGATGGTTGAAAAAACTCATCAGCGACAGTAGAATAGCTCCAATCAAATTAAGAGCTCACATACCCATCTCATTTGAGAAGATAAATGTGAAATTTGAAAATAACAAAACAAAATTCCAGTTCTTGTACTGAAATTTGAAAATCATGATTTTTAGGAAGTGTATAGACTAGTTGCAAGCCTATTTTACGAGGATAAAAAACATAAAGGAAAATATGTAGCACAATTAGATCTAATAACGTGGTGATTTTTATAAAACAAGAGCAAATAAAAACAATAAGAACTAACATAAGAACACAAGAGAGATGAAGAGGAGAAAAGTAGAGAAAACAATTGTTATTATGATTGAGACATCTCTTCCAAAAGCTCCATACAACACTATTTATAATATTTGAAATAGTGTAAGTTACAAGATCTTACATAATTCAACTTTTGTAACTCATGAAAATAATTGGAAGTTAATAAGAGGGATTTGTAACATATGAAGGTTATGGAAGTTAATAAGAGGGATTTGTAACATGTGAAGGTTATGGACATCTAATTTTAAGAATATTCAAATGTAATTTAAGATATGCATAATAGTGACAATTTTTTTATTTAAAAAAATGTAATTATTGGAAGGAATGGTAAAATAGATACTTGTGTTTTTTTAAGATAAAAAAGTAAAAATAAAAACCGAAATATGACCAATTCAAGATTTAGTTTGATTGTTGATTGCTAACTGTTTTCTTTTTGCGAAATTAGCAAAAATAGGACAAAATTTAGGAGGTAAAAACTTTTGAGATCACTTTTTAAAAAGAAGACTTTTGGGACAAATTTGATGTAAAATTTTCACATTTCCCTTTTAGTTTAAAAAAGTCCTAAAACATTGAATTAGTTTGGATTCCGCTCTCCTCTTCATGATTATTTCTCATTCCATTCCATCTCCTCCCTGATTCTTTCTCCTTCCATTCCATCTCTCACGCTCAACTCCAGCATCAACGCCATCCATATCTTCCAACTTCCATCGGACTTCACGTTTCCTTCTCCTTCAATTCCATGTTTTTTATAAAATAAAACTAAACAACAATAGTATTCACAAGTTGAGCAAAGTAGCTCTAACTCTTCCATTTTGATGGTCAATGTAAATATACAAATAAAAAAAACAAAAACCCCAAAAAAAAAAAAAGCATATAACAAAAATCAGGAAAGAATATTCTAACAAAACAACAAAAAATAGTAAACAACTCAATGTTTAAAATTGTAGAAATTTTCTTACAAATCAAAATCAAGGTATAAGTTCCTTATAATGGTTGAAGTTTAAGGAAAAAGTGGCTGCCCACTACTGTCGTAGTTCGTCCATCGAAGTCGAAGTCAAAGTTGAAGTCACTGCAGAAGTCGAAAATCACAAGGTCACAGTCCATCGAAAAAGTTACTCCCATGTTCACAGTCCATCGAAGTTACCAACATTCGTGGCTGGCGGTCACAGTCAGTCCATTTGTCGAAGCTGCCGTTCAAGCTATTCGTATCTCACCTGCCAAGGAGAAATAG

mRNA sequence

ATGGACCATTTGTCGAGCACCTACAAGAACTCCAGCGAGTACTTCCGCTGCGCCGTTGATCAATCCTCGCTTCGTGTTTCTGATCGAAAGTTCTTATCCTTTGGAAGAGATTCGAGGCAAACAAGTTTAAGGAAAAAGTGGCTGCCCACTACTGTCGTAGTTCGTCCATCGAAGTCGAAGTCAAAGTTGAAGTCACTGCAGAAGTCGAAAATCACAAGGTCACAGTCCATCGAAAAAGTTACTCCCATGTTCACAGTCCATCGAAGTTACCAACATTCGTGGCTGGCGGTCACAGTCAGTCCATTTGTCGAAGCTGCCGTTCAAGCTATTCGTATCTCACCTGCCAAGGAGAAATAG

Coding sequence (CDS)

ATGGACCATTTGTCGAGCACCTACAAGAACTCCAGCGAGTACTTCCGCTGCGCCGTTGATCAATCCTCGCTTCGTGTTTCTGATCGAAAGTTCTTATCCTTTGGAAGAGATTCGAGGCAAACAAGTTTAAGGAAAAAGTGGCTGCCCACTACTGTCGTAGTTCGTCCATCGAAGTCGAAGTCAAAGTTGAAGTCACTGCAGAAGTCGAAAATCACAAGGTCACAGTCCATCGAAAAAGTTACTCCCATGTTCACAGTCCATCGAAGTTACCAACATTCGTGGCTGGCGGTCACAGTCAGTCCATTTGTCGAAGCTGCCGTTCAAGCTATTCGTATCTCACCTGCCAAGGAGAAATAG

Protein sequence

MDHLSSTYKNSSEYFRCAVDQSSLRVSDRKFLSFGRDSRQTSLRKKWLPTTVVVRPSKSKSKLKSLQKSKITRSQSIEKVTPMFTVHRSYQHSWLAVTVSPFVEAAVQAIRISPAKEK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G017640.1Lsi01G017640.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G017640Bottle gourd (USVL1VR-Ls)lsilsiB073
Lsi01G017640Cucumber (Gy14) v1cgylsiB546
Lsi01G017640Cucumber (Gy14) v1cgylsiB576
Lsi01G017640Cucurbita maxima (Rimu)cmalsiB229
Lsi01G017640Cucurbita maxima (Rimu)cmalsiB601
Lsi01G017640Cucurbita maxima (Rimu)cmalsiB791
Lsi01G017640Cucurbita moschata (Rifu)cmolsiB217
Lsi01G017640Cucurbita moschata (Rifu)cmolsiB779
Lsi01G017640Cucurbita pepo (Zucchini)cpelsiB048
Lsi01G017640Cucurbita pepo (Zucchini)cpelsiB391
Lsi01G017640Cucurbita pepo (Zucchini)cpelsiB489
Lsi01G017640Wild cucumber (PI 183967)cpilsiB166
Lsi01G017640Wild cucumber (PI 183967)cpilsiB248
Lsi01G017640Cucumber (Chinese Long) v2culsiB167
Lsi01G017640Cucumber (Chinese Long) v2culsiB249
Lsi01G017640Melon (DHL92) v3.5.1lsimeB144
Lsi01G017640Melon (DHL92) v3.5.1lsimeB158
Lsi01G017640Watermelon (Charleston Gray)lsiwcgB121
Lsi01G017640Watermelon (Charleston Gray)lsiwcgB144
Lsi01G017640Watermelon (97103) v1lsiwmB130
Lsi01G017640Watermelon (97103) v1lsiwmB154
Lsi01G017640Cucumber (Gy14) v2cgyblsiB152
Lsi01G017640Cucumber (Gy14) v2cgyblsiB237
Lsi01G017640Melon (DHL92) v3.6.1lsimedB149
Lsi01G017640Melon (DHL92) v3.6.1lsimedB165
Lsi01G017640Silver-seed gourdcarlsiB224
Lsi01G017640Silver-seed gourdcarlsiB527
Lsi01G017640Cucumber (Chinese Long) v3cuclsiB182
Lsi01G017640Cucumber (Chinese Long) v3cuclsiB273
Lsi01G017640Watermelon (97103) v2lsiwmbB119
Lsi01G017640Watermelon (97103) v2lsiwmbB141
Lsi01G017640Wax gourdlsiwgoB182