Lsi01G017080 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G017080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DnaJ/Hsp40 cysteine-rich domain protein, putative
Location	chr01 : 15771463 .. 15777177 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTTTATGTCAAACAAATGAAAACGTCACCAATGGCCACCAAAATTCATTCATCAATTTGCCATCTGCAATTCGTTAATAACGAGAGAGAAATACCCAATCTTCGAGCTCACCTGTAGGCTGTAAGCATCGAAGTGAGCTATTGTATTGGCGATTTCCTCGAGAATTTCTTCAATTCGAGCTTTAATTTCCCTTTCCGCGCTTTGGAGGTCAATTTCATCGAAGATTTCCTTCTTTCATACGCAAATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGTTGGTACTTTTCAAATTGCTTATGTGATTTTATTTTCTGTTTTCCGAGTATTTATTGAAAGTTCTTTATTCAATGACTCAGTCTATTATACATTCATTTTCGTGTATTTGAAGGTGTTTGGTTTGATGCATACATAGGATTGTAATTGGCTCTTTTCAGCTATGTTTTTCTGATAGATTATAATTGGCTCTTTTCAGCATTTTGGTTTAAAGTTATTGCTCTGTTGTTTTTTTTCTTCTTATATTTGCATTCAGTTTAAACTTGACAAGGTTTAATGAGAGAGTTATGAAGATACAAACGGATACAAAAAAACCAAGCCCACAACAGGAAGCACCCTAGAAAAAGGGTCTCCAATCTAACAAAAATAAGATCTAACGAATAATTACAAAAAGAACTCGTCAGAGTCGCCCAAAGCAAAACATTAAACTTTTCCGGGGACCAAACAAAGCTTCCCTCTTAGCCCCTCAAAAAATCCTATTGTTTTTCTCTCCCCAAATGCCCCATAACATGGCATACACCCCAACCTTCCATAAATTATCCCCTCTCCCTCCACACGGCGAATGGAAGAGGAACTCCTCAATCATAACACTAAAATTTCTATGCTCGGCTAACTTGTAGTCAAACACCCCAAAGAAGATGTTCCGAACCAAACATGCAAAAGTATAATTTCAAAAAGTGATCCAAGTCTTCCTCGGCCATTTGCGAGGAATACAACAAAAAGGAGCAACCAAGGACATCTTTCTTGAAAGCCTATCCAAGGTATTAATTCTTCCACGAATCACCTGCCAAATAAAAAATTTCACCTTCGTTGGAATTTTCACCTTCCAAAGAAGAGAAAAAAACTGACTCTCTAAAGGGAAAAAGATCCAAGAGATTTAGAAAAAGAAAACTCTTAGAAGGGTTAAAGACTCCAACAACAAAAATCCTTTCTCCCTTGCCTAACCCCAACATCCCCCAATACGAAAGGAGGGTCACAACCTCCATCGTTACCCTATTGGACAAAGGACAACGAAACTCGAACAAAACACGAGAAGAGCTCTCTGAAAGCATCAAAACATCAGCAACAAAACAAATTTTCTTATTAGAAATGTGATAAGGATGAGGAAATTTACTGCAAAGGGGGCGATCCCCCAACTCATCTCCCACCACATAGTGGATCAACTCAGAGAACGAGGGGGCATCCAAAGAAATCCCTTTCAATGGATTCCTGAAGTGCCTTTAATCCTATCCGATATCCTATCAAAAGGATGAGGACCATACTTGCTTATAATAATCCAAGATCGTAGGGGTGAGGACTTAAAGGGTAAAACATAGAGCTCCCACATGTGATAATGGTGGTCTCTTTATATAACTATTGTTTGTCTGATGTTTAAATTGCAAAAGCTCTCATCTCATATTTTTGAAAAGAACCATTTTTATGAAGTGGTATAATTCCTTAGGATAATACTTTTGGCACCACGGCTCGTTGCCTGTTGGATTGGCATAATTGTTCGAATCTTGCAAGAGCATTTGTTTGTGATTTTTGATAATTAAACAAACATTTGCGACAGGTGCTCTGGTAAAGATTATATCAACCTTACCTTCTCTTTAATGAAAATCTAAGCAATTAATATTTTATGTCATTAGCATTTGGCAACTGTAACTAGACCTCAAGCATAAGCTCCTTAAACTTTTTGCCTTATTCTGTCCTATGCTTGTCTACATGTTTGTGATTGTGTATGGAATCATATGCTTGCAAGTGTATAGTTCTGCATTCATATTGCCATATGTTACAGTTTTGAGAATATTGTCAAATTTTCTGGATGTAGCAGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGTCTGGGTAAACTTGCATTCTTTCTTGAACTATTAGTATTAGTTGTAGCAACATTTAGGAGTGGTTCAAATTATGGACATTCTTTTTAACTGGAGCCCTGTTTTGTAATTTTCTTGTCTTTACCTTACCCCCTGTTTTCTGTTGCTCTTTTGGCTCCTTTAGGTTCAGGCCTCCCCTTTTTGTAGGGCTCTTTTTTTGGCTTGCCCGTTTATATTCTTTCATTTGTTCTCAAATGAAAGTCATTTTCTTATCCGGAAGGGCACTTTTTATTTTGATCCTGTCAGATTGTTACTTATCAGTGGCCATCGTGGATGTTTAACTTTGAAAGTAGAAAAGAAGTCGACAAGATACTAGATGTAGTTTATTCCTGTAATCATTTCCATATATCTTAAATGTTTTTAAGAAATCAATGCTGGAAACTGTGGAAGCTTTTGAATTGATTAGGCTTGTTTTTTGTCCTGTGCATTTCATTCAATTATACTTGTTGAAAAGGGAATTTTTTTTGTTTCATCACTGTCAGTTGTCAGTTAACTTATTGAAAAGTTTCTGTCCTAACTCTGTAATCATCTTCTTGTAGGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGTAATATGCATGGATCGATGATGGGATATATTAATCTTGCAATTTAGTGAAGATCAATAGAGTTCATTTTTCATTTAGGCAGTTTGTGGGATATTCTTACATAATTTGGTTCAATTTTGATTTAGTTCAAATTACTCCCAGTGTTCCCTTCCCGCAACATTTGTACTTGTAAGTCACATCGACACAGACTTCTTTCTGAACAGAAAGTTGTATGAACTATGACGTCTGAAATATATGAACTACAAGAAAAGTTTTCACAATTACTGCATGTATCTCTTTGTTTTTTTTTTGTTTTTTTACTATTTTTAGTAGTTATGAAGCTTTATTATGTGTTGAACAAAAAAAATAGAATCTACCCGAAATTTTTCTCTAAAATTTCCACAAGGAAAGCCGAAAGAACAAGATTTGCAGGGAAAAGGAAAGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGTGTTGGGGTTGTGGAAGAAAGAAGAATAAAGCCGGCATTTATGTTTCAGTGGGTTCCACGAAAGGCATTTTCTTCCTTATGCCAGTCTCTTACTGGAACTTGAGGAATGATCTAAATCTGCATCTTCACTTGTTTTTTCAATTCATGGTTGATTAAACTTGCAATCTCCGCCGGAGGTCTCGAATCCGTTCTGGTACAGTGGAATCAAACCGAGGATGCAGGGGATTGTCTGCATAAGCCACATAGTAGGCAGACACACATGCTTGCGGCCACGCCATTGCTATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGGTATTACCACTAAATTCAGTTAAAGTTTAGAACAGTTCTTTCTTTTTTCGTTTAATGATTCAGCTCATTACCAGAAAATAGCCAATTAGGAAGGCGTAGATTGCTAATTCTGTTGCATAGTTCTTGTGTATTACAAGTGCCCAGATCCCACTTATAATGCTGCAGATTGCACCACCTGAAACCCCGCAGAGAACGCAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGGTATCATATGAAGCCTGCACAATCCCTTTATTGTAAACACCGACGTGGACGAAACCCCACCTGTTTCCATGGTTTCTCAGCATCGAAGCCAATCCCGAGTAGCAGTTTGCACAAGAGAAAAGGAACTCATCCGAGTCTCCTGCCACCAGCCTCATGGAACGGGCAGATCCCTGAATGAAGCTGATAAGGGGGATGATGACTGAGCCAAGAGAAATAGTTCCAACTGAATACTTTATTGTGTCATGGAAAGCTGCTCGTATGTCCTTTTCATGACCCCAAGCTAAATTCAAGTACTTTATGCGTGAGATTGTAACTTGCACTATGTTCTTGATGACCTGCAGACTCCATGTTAAGCTCAACAGTATTGCTGCTATGAACAATGCTTTAAAACTAGACCTAACAGCAATTGCTCCACCGATGCCGATGACCAAGAAAGATGCATAAAGGATGCCAATGACGATTGATCCAATGACAAAGATTGGAGTGTTCGTTGGTGGGTATTTAGTAGAAAGTGATAGAAGTTGAATTGCATAATTCAACCGGTGATTGATCCAACAGACATATACAGACAGAATCAAGGAAGAAACTATGAGGATTACTCCTGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTGTCTTGAAAGCCATAGAAGGAGAGCAGCCAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGAAAATTATGTGTTTTAGAAGCCGACCGAAGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAAAATTCTCCATCCCACAGCAGGCTCATTCAGATGGATCGGTTCT

mRNA sequence

GCTTTTTATGTCAAACAAATGAAAACGTCACCAATGGCCACCAAAATTCATTCATCAATTTGCCATCTGCAATTCGTTAATAACGAGAGAGAAATACCCAATCTTCGAGCTCACCTGTAGGCTGTAAGCATCGAAGTGAGCTATTGTATTGGCGATTTCCTCGAGAATTTCTTCAATTCGAGCTTTAATTTCCCTTTCCGCGCTTTGGAGGTCAATTTCATCGAAGATTTCCTTCTTTCATACGCAAATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGCAGACACACATGCTTGCGGCCACGCCATTGCTATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTGCAGATTGCACCACCTGAAACCCCGCAGAGAACGCAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGACATATACAGACAGAATCAAGGAAGAAACTATGAGGATTACTCCTGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTGTCTTGAAAGCCATAGAAGGAGAGCAGCCAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGAAAATTATGTGTTTTAGAAGCCGACCGAAGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAAAATTCTCCATCCCACAGCAGGCTCATTCAGATGGATCGGTTCT

Coding sequence (CDS)

ATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGCAGACACACATGCTTGCGGCCACGCCATTGCTATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTGCAGATTGCACCACCTGAAACCCCGCAGAGAACGCAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGACATATACAGACAGAATCAAGGAAGAAACTATGAGGATTACTCCTGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTGTCTTGAAAGCCATAGAAGGAGAGCAGCCAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGAAAATTATGTGTTTTAGAAGCCGACCGAAGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAAAATTCTCCATCCCACAGCAGGCTCATTCAGATGGATCGGTTCT

Protein sequence

MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLSKRFILNCPQLQTHMLAATPLLFDTATTTMSIVIQKLNSSQIPLIMLQIAPPETPQRTQKDTVRSESITIPKSTLLNASQTYTDRIKEETMRITPAAKPPRDPTMTKKMPEASDRTGLNQKAVLKAIEGEQPVKACHKKAMIPELPIEANNGGYHFSGRKLCVLEADRSPRTVKKITNTATRHKCTLKTMLENHLKILHPTAGSFRWIGS

Homology

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BLAST of Lsi01G017080 vs. TrEMBL
Match: A0A0A0L441_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G580370 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 5.1e-62
Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 1


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADV 60
           MDSATLTMSSSVILRNSS KLL IRKIQ  LCF+RNKFSKISA+YPNGSASGGDSSAADV
Sbjct: 1   MDSATLTMSSSVILRNSSLKLLVIRKIQPPLCFKRNKFSKISALYPNGSASGGDSSAADV 60

Query: 61  HRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGL 120
           HRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSGL
Sbjct: 61  HRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSGL 120

Query: 121 YVDSILESQGIIVKV 136
           YVDSILESQGIIVKV
Sbjct: 121 YVDSILESQGIIVKV 135

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BLAST of Lsi01G017080 vs. TrEMBL
Match: U5FFM7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s05690g PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39
Identity = 97/158 (61.39%), Postives = 111/158 (70.25%), Query Frame = 1


Query: 4   ATLTMSSSVILRNSSQK-------LLAIRKIQDGLCFERNK-FSKISAVYPNGS------ 63
           +T+ + SS++L  SS         +L   KI  G  F  N   +KISA+ PNGS      
Sbjct: 3   STIRIGSSILLPISSSSSSPKSSNILRNDKIGYGFQFSGNGCITKISAITPNGSVFPSAS 62

Query: 64  ASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGA 123
           + G  SS  DVHRRRSS ESLFCYDK +PEERIE PVG+SLA K+IGDNPRCTDCQAKGA
Sbjct: 63  SHGESSSMGDVHRRRSSLESLFCYDKPIPEERIEEPVGVSLAAKVIGDNPRCTDCQAKGA 122

Query: 124 VLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNV 148
           VLC+TCSGSGLYVDSI+ESQGIIVKVVV     C QNV
Sbjct: 123 VLCTTCSGSGLYVDSIMESQGIIVKVVVGQGTSCAQNV 160

[Close]

BLAST of Lsi01G017080 vs. TrEMBL
Match: B9IPV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s05690g PE=4 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 2.8e-36
Identity = 91/146 (62.33%), Postives = 105/146 (71.92%), Query Frame = 1


Query: 4   ATLTMSSSVILRNSSQK-------LLAIRKIQDGLCFERNK-FSKISAVYPNGS------ 63
           +T+ + SS++L  SS         +L   KI  G  F  N   +KISA+ PNGS      
Sbjct: 3   STIRIGSSILLPISSSSSSPKSSNILRNDKIGYGFQFSGNGCITKISAITPNGSVFPSAS 62

Query: 64  ASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGA 123
           + G  SS  DVHRRRSS ESLFCYDK +PEERIE PVG+SLA K+IGDNPRCTDCQAKGA
Sbjct: 63  SHGESSSMGDVHRRRSSLESLFCYDKPIPEERIEEPVGVSLAAKVIGDNPRCTDCQAKGA 122

Query: 124 VLCSTCSGSGLYVDSILESQGIIVKV 136
           VLC+TCSGSGLYVDSI+ESQGIIVKV
Sbjct: 123 VLCTTCSGSGLYVDSIMESQGIIVKV 148

[Close]

BLAST of Lsi01G017080 vs. TrEMBL
Match: W9RT18_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009641 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-36
Identity = 82/102 (80.39%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 39  SKISAVYPNGSAS-----GGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEK 98
           +K+SA  PNGS S     G  SS  D HRRRSS ESLFCYDKAVPEERIE PVGISLAEK
Sbjct: 42  TKLSAFSPNGSVSRSCSNGAASSVGDAHRRRSSLESLFCYDKAVPEERIEKPVGISLAEK 101

Query: 99  MIGDNPRCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV 136
           +IGDNPRC DC AKGAVLCSTCSGSGLYVDSILESQGIIVKV
Sbjct: 102 LIGDNPRCNDCHAKGAVLCSTCSGSGLYVDSILESQGIIVKV 143

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BLAST of Lsi01G017080 vs. TrEMBL
Match: A0A061EZC5_THECC (DnaJ/Hsp40 cysteine-rich domain superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_025816 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 90/142 (63.38%), Postives = 99/142 (69.72%), Query Frame = 1


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFE-RNKFSKISAVYPNGSASGGDSSAA- 60
           M+SA    SS +   NS+ K     KI  G  +   N   KI AVY NGS S   S  A 
Sbjct: 1   MESAMKISSSIIFPINSTPKSNNYNKISYGFRYNGSNSIFKICAVYSNGSVSSSASYGAE 60

Query: 61  -----DVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCS 120
                D HRRRSS ESLFCYDK +PEERIE PVG+SLAEK++GDN RCTDCQAKGAVLC+
Sbjct: 61  SRAVGDAHRRRSSLESLFCYDKPIPEERIEEPVGVSLAEKIVGDNLRCTDCQAKGAVLCT 120

Query: 121 TCSGSGLYVDSILESQGIIVKV 136
           TCSGSGLYVDSILESQGIIVKV
Sbjct: 121 TCSGSGLYVDSILESQGIIVKV 142

[Close]

BLAST of Lsi01G017080 vs. TAIR10
Match: AT5G17840.1 (AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-30
Identity = 61/96 (63.54%), Postives = 77/96 (80.21%), Query Frame = 1


Query: 40  KISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP 99
           ++ ++ P+ S         DVHR+RSS ES+FCYDK +PEE IE PVG+S++E+ IGDN 
Sbjct: 35  RLCSLPPSSSIKAESCLKRDVHRQRSSLESMFCYDKPIPEEIIEEPVGLSMSEREIGDNQ 94

Query: 100 RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV 136
           RCT C+AKGA+LCSTCSG+GLYVDSI+ESQGIIVKV
Sbjct: 95  RCTCCEAKGALLCSTCSGTGLYVDSIMESQGIIVKV 130

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BLAST of Lsi01G017080 vs. NCBI nr
Match: gi|778695213|ref|XP_011653948.1| (PREDICTED: uncharacterized protein LOC101220837 isoform X3 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 7.3e-62
Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 1


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADV 60
           MDSATLTMSSSVILRNSS KLL IRKIQ  LCF+RNKFSKISA+YPNGSASGGDSSAADV
Sbjct: 1   MDSATLTMSSSVILRNSSLKLLVIRKIQPPLCFKRNKFSKISALYPNGSASGGDSSAADV 60

Query: 61  HRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGL 120
           HRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSGL
Sbjct: 61  HRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSGL 120

Query: 121 YVDSILESQGIIVKV 136
           YVDSILESQGIIVKV
Sbjct: 121 YVDSILESQGIIVKV 135

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: gi|449453818|ref|XP_004144653.1| (PREDICTED: uncharacterized protein LOC101220837 isoform X1 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 125/136 (91.91%), Postives = 131/136 (96.32%), Query Frame = 1


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDSATLTMSSSVILRNSS KLL IRKIQ  LCF+RNKFSKISA+YPNGSASG GDSSAAD
Sbjct: 1   MDSATLTMSSSVILRNSSLKLLVIRKIQPPLCFKRNKFSKISALYPNGSASGQGDSSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSG
Sbjct: 61  VHRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSG 120

Query: 121 LYVDSILESQGIIVKV 136
           LYVDSILESQGIIVKV
Sbjct: 121 LYVDSILESQGIIVKV 136

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: gi|659082807|ref|XP_008442041.1| (PREDICTED: uncharacterized protein LOC103486023 isoform X2 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 5.2e-60
Identity = 121/135 (89.63%), Postives = 130/135 (96.30%), Query Frame = 1


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADV 60
           MDSATLT+SSSVILRNSS KLL IRKIQ  LCF+RN+FS+ISA+Y NGSASGGDSSAADV
Sbjct: 1   MDSATLTLSSSVILRNSSLKLLVIRKIQPSLCFKRNEFSRISALYANGSASGGDSSAADV 60

Query: 61  HRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGL 120
           HRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSGL
Sbjct: 61  HRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSGL 120

Query: 121 YVDSILESQGIIVKV 136
           YVDSILESQGIIVKV
Sbjct: 121 YVDSILESQGIIVKV 135

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: gi|659082805|ref|XP_008442040.1| (PREDICTED: uncharacterized protein LOC103486023 isoform X1 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 1


Query: 1   MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAAD 60
           MDSATLT+SSSVILRNSS KLL IRKIQ  LCF+RN+FS+ISA+Y NGSASG GDSSAAD
Sbjct: 1   MDSATLTLSSSVILRNSSLKLLVIRKIQPSLCFKRNEFSRISALYANGSASGQGDSSAAD 60

Query: 61  VHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSG 120
           VHRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPRCTDCQAKGAVLC+TCSGSG
Sbjct: 61  VHRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSG 120

Query: 121 LYVDSILESQGIIVKV 136
           LYVDSILESQGIIVKV
Sbjct: 121 LYVDSILESQGIIVKV 136

[Close]

BLAST of Lsi01G017080 vs. NCBI nr
Match: gi|566232983|ref|XP_006371202.1| (hypothetical protein POPTR_0019s05690g [Populus trichocarpa])

HSP 1 Score: 170.2 bits (430), Expect = 6.6e-39
Identity = 97/158 (61.39%), Postives = 111/158 (70.25%), Query Frame = 1


Query: 4   ATLTMSSSVILRNSSQK-------LLAIRKIQDGLCFERNK-FSKISAVYPNGS------ 63
           +T+ + SS++L  SS         +L   KI  G  F  N   +KISA+ PNGS      
Sbjct: 3   STIRIGSSILLPISSSSSSPKSSNILRNDKIGYGFQFSGNGCITKISAITPNGSVFPSAS 62

Query: 64  ASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGA 123
           + G  SS  DVHRRRSS ESLFCYDK +PEERIE PVG+SLA K+IGDNPRCTDCQAKGA
Sbjct: 63  SHGESSSMGDVHRRRSSLESLFCYDKPIPEERIEEPVGVSLAAKVIGDNPRCTDCQAKGA 122

Query: 124 VLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNV 148
           VLC+TCSGSGLYVDSI+ESQGIIVKVVV     C QNV
Sbjct: 123 VLCTTCSGSGLYVDSIMESQGIIVKVVVGQGTSCAQNV 160

The following BLAST results are available for this feature:

BLAST of Lsi01G017080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G017080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L441_CUCSA	5.1e-62	92.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G580370 PE=4 SV=1	[more]
U5FFM7_POPTR	4.6e-39	61.39	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s05690g PE=4 SV=1	[more]
B9IPV1_POPTR	2.8e-36	62.33	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s05690g PE=4 SV=2	[more]
W9RT18_9ROSA	4.8e-36	80.39	Uncharacterized protein OS=Morus notabilis GN=L484_009641 PE=4 SV=1	[more]
A0A061EZC5_THECC	1.1e-35	63.38	DnaJ/Hsp40 cysteine-rich domain superfamily protein isoform 1 OS=Theobroma cacao...	[more]

BLAST of Lsi01G017080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17840.1	2.7e-30	63.54	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

BLAST of Lsi01G017080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695213\|ref\|XP_011653948.1\|	7.3e-62	92.59	PREDICTED: uncharacterized protein LOC101220837 isoform X3 [Cucumis sativus]	[more]
gi\|449453818\|ref\|XP_004144653.1\|	1.8e-60	91.91	PREDICTED: uncharacterized protein LOC101220837 isoform X1 [Cucumis sativus]	[more]
gi\|659082807\|ref\|XP_008442041.1\|	5.2e-60	89.63	PREDICTED: uncharacterized protein LOC103486023 isoform X2 [Cucumis melo]	[more]
gi\|659082805\|ref\|XP_008442040.1\|	1.3e-58	88.97	PREDICTED: uncharacterized protein LOC103486023 isoform X1 [Cucumis melo]	[more]
gi\|566232983\|ref\|XP_006371202.1\|	6.6e-39	61.39	hypothetical protein POPTR_0019s05690g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G017080.1	Lsi01G017080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	FAMILY NOT NAMED	coord: 49..135 score: 2.2
None	No IPR available	PANTHER	PTHR15852:SF15	DNAJ/HSP40 CYSTEINE-RICH DOMAIN SUPERFAMILY PROTEIN	coord: 49..135 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G017080	Csa4G580370	Cucumber (Chinese Long) v2	culsiB252
Lsi01G017080	CSPI04G21230	Wild cucumber (PI 183967)	cpilsiB251
Lsi01G017080	Cucsa.069760	Cucumber (Gy14) v1	cgylsiB070
Lsi01G017080	CmaCh07G011360	Cucurbita maxima (Rimu)	cmalsiB791
Lsi01G017080	CmoCh07G011850	Cucurbita moschata (Rifu)	cmolsiB779
Lsi01G017080	MELO3C008865	Melon (DHL92) v3.5.1	lsimeB157
Lsi01G017080	MELO3C008865.2	Melon (DHL92) v3.6.1	lsimedB164
Lsi01G017080	Bhi03G001871	Wax gourd	lsiwgoB189
Lsi01G017080	Cp4.1LG19g02170	Cucurbita pepo (Zucchini)	cpelsiB391
Lsi01G017080	Cp4.1LG10g10970	Cucurbita pepo (Zucchini)	cpelsiB048
Lsi01G017080	CsGy4G019830	Cucumber (Gy14) v2	cgyblsiB239
Lsi01G017080	Carg13349	Silver-seed gourd	carlsiB527
Lsi01G017080	CsaV3_4G031610	Cucumber (Chinese Long) v3	cuclsiB275

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G017080	Wax gourd	lsiwgoB169
Lsi01G017080	Cucurbita maxima (Rimu)	cmalsiB601
Lsi01G017080	Cucurbita moschata (Rifu)	cmolsiB587
Lsi01G017080	Watermelon (Charleston Gray)	lsiwcgB137
Lsi01G017080	Watermelon (97103) v1	lsiwmB147
Lsi01G017080	Silver-seed gourd	carlsiB940
Lsi01G017080	Watermelon (97103) v2	lsiwmbB135