Lsi01G016200 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G016200
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Stonustoxin subunit beta
Location	chr01 : 14593464 .. 14594563 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATCCAAATCCTTCTGAAAACCCCTTTTTTTTCCTCTCCCATTCTTCTCTTTTTCTATGATTCCATTTCTTCTCTTTCAAATCAATTCTCCATTTCCATCAATATGCAGACTCTCCACCATCCCTTAGCCACTCCTCAAGATCTTCCTCTGAAGTCCGGCCGCCGCCCACTCCAGCAGAAGAATTCTCTCCCAAATCCTGTTCCTTCCGTCGCCAAAATCATCAAATCTAAGCCGGAACGGATCCAGATCTCTCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCACGCGACGGCAACTGCAACAACGGCGAGTATTGAGTCCTGTGATTCGTCTCTGGCGGATGAACTTAGTGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGAAGGTGAACGAACGGAGCAGATGTTGAGAGAAAGGGATTTGGTGTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAGGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTCAGATCGTACTGTATGGTAAATGACTAAACGTTCTGTTTTGTGAGTTTGAAGTTTCGATTAGTGTTTATTTGTTGTTCGTTTGCTGATTTTTTATGATTTGAATCAGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGTAAGTTCCGATCTCAAATTTCGAAGCTATTTCTCGATTCATCCGCTTCAATGTAAAATCAATCTACAATCCACTGATTGTTTCAGGAATTTGATATCGGCGATGGAGAAGAATCTGTGGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGGTTTTGAAATCGTTTAAGTTTCGTTTTGCCCTAATTTTCCAGTCACTACTGCTACCTCTTCTTCCTTCATCTTCTTTGGATTTCAAATGTAGAAAAAGAAATCAATGTAATACCTCATTATGATCTTCTTTATGCTTTAATTGAAACTTTCGAGTTGTAATCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGAAAATGAAGAAAATCAAAATCGTTCATGA

mRNA sequence

CAAAAATCCAAATCCTTCTGAAAACCCCTTTTTTTTCCTCTCCCATTCTTCTCTTTTTCTATGATTCCATTTCTTCTCTTTCAAATCAATTCTCCATTTCCATCAATATGCAGACTCTCCACCATCCCTTAGCCACTCCTCAAGATCTTCCTCTGAAGTCCGGCCGCCGCCCACTCCAGCAGAAGAATTCTCTCCCAAATCCTGTTCCTTCCGTCGCCAAAATCATCAAATCTAAGCCGGAACGGATCCAGATCTCTCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCACGCGACGGCAACTGCAACAACGGCGAGTATTGAGTCCTGTGATTCGTCTCTGGCGGATGAACTTAGTGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGAAGGTGAACGAACGGAGCAGATGTTGAGAGAAAGGGATTTGGTGTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAGGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTCAGATCGTACTGTATGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGATATCGGCGATGGAGAAGAATCTGTGGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGGTTTTGAAATCGTTTAAGTTTCGTTTTGCCCTAATTTTCCAGTCACTACTGCTACCTCTTCTTCCTTCATCTTCTTTGGATTTCAAATGTAGAAAAAGAAATCAATGTAATACCTCATTATGATCTTCTTTATGCTTTAATTGAAACTTTCGAGTTGTAATCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGAAAATGAAGAAAATCAAAATCGTTCATGA

Coding sequence (CDS)

ATGCAGACTCTCCACCATCCCTTAGCCACTCCTCAAGATCTTCCTCTGAAGTCCGGCCGCCGCCCACTCCAGCAGAAGAATTCTCTCCCAAATCCTGTTCCTTCCGTCGCCAAAATCATCAAATCTAAGCCGGAACGGATCCAGATCTCTCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCACGCGACGGCAACTGCAACAACGGCGAGTATTGAGTCCTGTGATTCGTCTCTGGCGGATGAACTTAGTGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGAAGGTGAACGAACGGAGCAGATGTTGAGAGAAAGGGATTTGGTGTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAGGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTCAGATCGTACTGTATGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGATATCGGCGATGGAGAAGAATCTGTGGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGGTTTTGAAATCGTTTAA

Protein sequence

MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENLPPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEESVGENSSLDSAEFVTGFEIV

Homology

[Close]

BLAST of Lsi01G016200 vs. TrEMBL
Match: A0A0A0L063_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334650 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.9e-85
Identity = 176/197 (89.34%), Postives = 183/197 (92.89%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENL 60
           MQTLHHPL  P+DLPLKSGRRPLQ KNSLPNPVPSVAKIIKSKPE IQISLSGDANKEN 
Sbjct: 1   MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKEL 120
           PP       TT SIESCD SLADEL+AVKRK+ERLRL+GERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEF+IGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVTGF 198
           SVGENSSLDS+EFVTGF
Sbjct: 181 SVGENSSLDSSEFVTGF 191

[Close]

BLAST of Lsi01G016200 vs. TrEMBL
Match: A3F4B8_TRIDB (Putative uncharacterized protein (Fragment) OS=Trichosanthes dioica PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1


Query: 89  KRKLERLRLEGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCM 148
           KRKLERLRL+GERTE+MLRERD++ ELRMKELLQRSQEQRDLEMEVD LFRLKELRSYCM
Sbjct: 4   KRKLERLRLDGERTEKMLRERDMMFELRMKELLQRSQEQRDLEMEVDGLFRLKELRSYCM 63

Query: 149 RISPIRSLREKEREKIFTDAQFPEFDIGDGEESVGENSSLDSAEFVTGFEIV 201
           RISPIRSLREKEREKIFTDAQFPEF+IGDGEESVGENSSLDS+E V    +V
Sbjct: 64  RISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSELVRSQSLV 115

[Close]

BLAST of Lsi01G016200 vs. TrEMBL
Match: B9IGV0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s14520g PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.5e-36
Identity = 101/186 (54.30%), Postives = 131/186 (70.43%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENL 60
           M     PL   +DL  KSGR+PLQ KNS   P+  + +I+KSK E  + S+  D+NKEN 
Sbjct: 1   MLKFQSPLTGDKDLRPKSGRKPLQPKNSPATPMTQI-QILKSKQEWTEFSVVKDSNKENH 60

Query: 61  PPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKEL 120
           P    T T T   +E  DSSLA+ELSA+K+KLERLR + ERTE+ML ER +VL+L+ KEL
Sbjct: 61  PIY--TTTPTKPIVEPLDSSLAEELSAIKKKLERLRSDKERTEKMLEERAMVLDLQKKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEE 180
            QR + Q+ LE+EVDRL+RLKEL SY MRISPIR+LREKE EK  ++AQ  E +  + EE
Sbjct: 121 EQRGEVQKRLEIEVDRLYRLKELHSYSMRISPIRTLREKEHEKKMSEAQPLEKETEELEE 180

Query: 181 SVGENS 187
           S+G+N+
Sbjct: 181 SLGDNA 183

[Close]

BLAST of Lsi01G016200 vs. TrEMBL
Match: B9HDJ7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s10990g PE=4 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34
Identity = 101/185 (54.59%), Postives = 130/185 (70.27%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENL 60
           M  L  PL   ++L  KS R+PLQ KNS   P+  V +I+K K E I+ S+  D+NKEN 
Sbjct: 1   MLKLQSPLTGDENLRQKSCRKPLQPKNSPVTPMTQV-QILKPKQEWIEFSVVKDSNKENH 60

Query: 61  PPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKEL 120
           P    T T T + IE  DSSLA+ELSA+K+KLERLRL+ ERTE+ML+ER++V++L+MKEL
Sbjct: 61  PIY--TTTPTKSIIEPLDSSLAEELSAIKKKLERLRLDRERTEKMLKEREMVMDLQMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEE 180
            QR + Q+ LE++VD L+RLKEL+SY M ISPIR+LREKE EK     Q  E    D EE
Sbjct: 121 EQRGEVQKRLEIQVDILYRLKELQSYSMIISPIRTLREKEHEKKTCGVQPEETRAEDSEE 180

Query: 181 SVGEN 186
           SVGE+
Sbjct: 181 SVGED 182

[Close]

BLAST of Lsi01G016200 vs. TrEMBL
Match: A0A067JDF3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00644 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 99/212 (46.70%), Postives = 132/212 (62.26%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPER-----IQISLSGDA 60
           MQ +  PL     L  K GR PLQ KN   NPV  + +I+K KP++     I+IS+ G+ 
Sbjct: 1   MQKVQSPLNGDHKLRPKCGRTPLQPKNLPSNPVTEI-QILKPKPKQKQERIIEISVDGEL 60

Query: 61  NKENLPPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLEL 120
           NKEN P   +  T T   IE  D+SLA+ELSA+++KLER++++ ERT++ML ER   ++L
Sbjct: 61  NKENHPI--SVTTPTKLIIEQLDASLAEELSAIRKKLERMKVDRERTKKMLNERAKTMDL 120

Query: 121 RMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDI 180
           +MKEL QR + Q+ LE+EVDRLFRLKEL+S  MRISPIRSLREKE EK      + E   
Sbjct: 121 QMKELEQRGEVQKRLEIEVDRLFRLKELQSGSMRISPIRSLREKEHEKKIAHLHWQEMKA 180

Query: 181 GDGEESVGEN-------SSLDSAEFVTGFEIV 201
            D EES   +       SS  S+  ++   IV
Sbjct: 181 EDMEESASASGLKTPCLSSSSSSNSISSSHIV 209

[Close]

BLAST of Lsi01G016200 vs. TAIR10
Match: AT5G01910.1 (AT5G01910.1 unknown protein)

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-21
Identity = 74/175 (42.29%), Postives = 101/175 (57.71%), Query Frame = 1


Query: 18  SGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENLPPIHATATATTASIE-S 77
           SGR+ LQ +N    P      +     E++         KENL            ++E S
Sbjct: 4   SGRKALQPRNIYQTPKEDAFFVKPKAAEKL---------KENL------------NLETS 63

Query: 78  CDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDR 137
            D+SLA+ELSA K+KLERLR + E TE++L+ERD  ++L M  LLQR + Q+ LE++VDR
Sbjct: 64  IDASLAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDR 123

Query: 138 LFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEESVGENSSLDSA 192
           LFRLKEL +Y  +ISPIRSLR KE+++      F       GEE   E SS++ A
Sbjct: 124 LFRLKELHAYSSKISPIRSLRAKEQQEKMRRFTFA------GEEQPDEESSVEIA 151

[Close]

BLAST of Lsi01G016200 vs. NCBI nr
Match: gi|449449855|ref|XP_004142680.1| (PREDICTED: high mobility group B protein 6 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 5.6e-85
Identity = 176/197 (89.34%), Postives = 183/197 (92.89%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENL 60
           MQTLHHPL  P+DLPLKSGRRPLQ KNSLPNPVPSVAKIIKSKPE IQISLSGDANKEN 
Sbjct: 1   MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKEL 120
           PP       TT SIESCD SLADEL+AVKRK+ERLRL+GERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEF+IGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVTGF 198
           SVGENSSLDS+EFVTGF
Sbjct: 181 SVGENSSLDSSEFVTGF 191

[Close]

BLAST of Lsi01G016200 vs. NCBI nr
Match: gi|659126597|ref|XP_008463266.1| (PREDICTED: uncharacterized protein LOC103501469 [Cucumis melo])

HSP 1 Score: 320.5 bits (820), Expect = 2.1e-84
Identity = 175/197 (88.83%), Postives = 184/197 (93.40%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENL 60
           MQTLHHPL +P+D+PLKSGRRPLQ KNSLPN VPSVAKIIKSKPE IQISLSGDANKEN 
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKEL 120
           PP      ATT SIESCD SLADEL+AVKRK+ERLRL+GERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEF+IGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVTGF 198
           SVGENSSLDS+EFVTGF
Sbjct: 181 SVGENSSLDSSEFVTGF 191

[Close]

BLAST of Lsi01G016200 vs. NCBI nr
Match: gi|125662104|gb|ABN50046.1| (unknown [Trichosanthes dioica])

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1


Query: 89  KRKLERLRLEGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCM 148
           KRKLERLRL+GERTE+MLRERD++ ELRMKELLQRSQEQRDLEMEVD LFRLKELRSYCM
Sbjct: 4   KRKLERLRLDGERTEKMLRERDMMFELRMKELLQRSQEQRDLEMEVDGLFRLKELRSYCM 63

Query: 149 RISPIRSLREKEREKIFTDAQFPEFDIGDGEESVGENSSLDSAEFVTGFEIV 201
           RISPIRSLREKEREKIFTDAQFPEF+IGDGEESVGENSSLDS+E V    +V
Sbjct: 64  RISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSELVRSQSLV 115

[Close]

BLAST of Lsi01G016200 vs. NCBI nr
Match: gi|743915468|ref|XP_011001686.1| (PREDICTED: uncharacterized protein LOC105108887 isoform X2 [Populus euphratica])

HSP 1 Score: 159.5 bits (402), Expect = 6.3e-36
Identity = 103/186 (55.38%), Postives = 133/186 (71.51%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENL 60
           M  L  PL   +DL  KSGR+PLQ KNS   P+  + +I+K K E  + S+  D+NKEN 
Sbjct: 1   MLKLQSPLTGDKDLRTKSGRKPLQPKNSPATPMTQI-QILKPKQEWTEFSVVKDSNKEN- 60

Query: 61  PPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKEL 120
            PI+ T T T   +E  DSSLA+ELSA+K+KLERLR + ERTE+ML ER +VL+L+ KEL
Sbjct: 61  HPIYNT-TPTKPIVEPLDSSLAEELSAIKKKLERLRSDKERTEKMLEERAMVLDLQKKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEE 180
            QR + Q+ LE+EVDRL+RLKEL SY MRISPIR+LREKE EK  ++AQ  E +  + EE
Sbjct: 121 EQRGEVQKRLEIEVDRLYRLKELHSYSMRISPIRTLREKEHEKKMSEAQPLEKETEELEE 180

Query: 181 SVGENS 187
           SVG+N+
Sbjct: 181 SVGDNA 183

[Close]

BLAST of Lsi01G016200 vs. NCBI nr
Match: gi|224140619|ref|XP_002323679.1| (hypothetical protein POPTR_0016s14520g [Populus trichocarpa])

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 101/186 (54.30%), Postives = 131/186 (70.43%), Query Frame = 1


Query: 1   MQTLHHPLATPQDLPLKSGRRPLQQKNSLPNPVPSVAKIIKSKPERIQISLSGDANKENL 60
           M     PL   +DL  KSGR+PLQ KNS   P+  + +I+KSK E  + S+  D+NKEN 
Sbjct: 1   MLKFQSPLTGDKDLRPKSGRKPLQPKNSPATPMTQI-QILKSKQEWTEFSVVKDSNKENH 60

Query: 61  PPIHATATATTASIESCDSSLADELSAVKRKLERLRLEGERTEQMLRERDLVLELRMKEL 120
           P    T T T   +E  DSSLA+ELSA+K+KLERLR + ERTE+ML ER +VL+L+ KEL
Sbjct: 61  PIY--TTTPTKPIVEPLDSSLAEELSAIKKKLERLRSDKERTEKMLEERAMVLDLQKKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFDIGDGEE 180
            QR + Q+ LE+EVDRL+RLKEL SY MRISPIR+LREKE EK  ++AQ  E +  + EE
Sbjct: 121 EQRGEVQKRLEIEVDRLYRLKELHSYSMRISPIRTLREKEHEKKMSEAQPLEKETEELEE 180

Query: 181 SVGENS 187
           S+G+N+
Sbjct: 181 SLGDNA 183

The following BLAST results are available for this feature:

BLAST of Lsi01G016200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G016200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L063_CUCSA	3.9e-85	89.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334650 PE=4 SV=1	[more]
A3F4B8_TRIDB	1.1e-42	87.50	Putative uncharacterized protein (Fragment) OS=Trichosanthes dioica PE=2 SV=1	[more]
B9IGV0_POPTR	7.5e-36	54.30	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s14520g PE=4 SV=1	[more]
B9HDJ7_POPTR	1.4e-34	54.59	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s10990g PE=4 SV=2	[more]
A0A067JDF3_JATCU	1.2e-30	46.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00644 PE=4 SV=1	[more]

BLAST of Lsi01G016200 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01910.1	3.5e-21	42.29	unknown protein	[more]

BLAST of Lsi01G016200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449855\|ref\|XP_004142680.1\|	5.6e-85	89.34	PREDICTED: high mobility group B protein 6 [Cucumis sativus]	[more]
gi\|659126597\|ref\|XP_008463266.1\|	2.1e-84	88.83	PREDICTED: uncharacterized protein LOC103501469 [Cucumis melo]	[more]
gi\|125662104\|gb\|ABN50046.1\|	1.5e-42	87.50	unknown [Trichosanthes dioica]	[more]
gi\|743915468\|ref\|XP_011001686.1\|	6.3e-36	55.38	PREDICTED: uncharacterized protein LOC105108887 isoform X2 [Populus euphratica]	[more]
gi\|224140619\|ref\|XP_002323679.1\|	1.1e-35	54.30	hypothetical protein POPTR_0016s14520g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048449	floral organ formation
biological_process	GO:0048438	floral whorl development
biological_process	GO:0048827	phyllome development
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G016200.1	Lsi01G016200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 85..105 scor
None	No IPR available	PANTHER	PTHR36790	FAMILY NOT NAMED	coord: 2..200 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G016200	Csa4G334650	Cucumber (Chinese Long) v2	culsiB248
Lsi01G016200	CSPI04G16610	Wild cucumber (PI 183967)	cpilsiB247
Lsi01G016200	Cucsa.130560	Cucumber (Gy14) v1	cgylsiB202
Lsi01G016200	CmaCh07G012190	Cucurbita maxima (Rimu)	cmalsiB791
Lsi01G016200	CmoCh03G003010	Cucurbita moschata (Rifu)	cmolsiB587
Lsi01G016200	CmoCh07G012610	Cucurbita moschata (Rifu)	cmolsiB779
Lsi01G016200	Cla012036	Watermelon (97103) v1	lsiwmB152
Lsi01G016200	MELO3C025225	Melon (DHL92) v3.5.1	lsimeB157
Lsi01G016200	ClCG04G006330	Watermelon (Charleston Gray)	lsiwcgB142
Lsi01G016200	MELO3C025225.2	Melon (DHL92) v3.6.1	lsimedB164
Lsi01G016200	Cla97C04G072920	Watermelon (97103) v2	lsiwmbB140
Lsi01G016200	Bhi03G001770	Wax gourd	lsiwgoB169
Lsi01G016200	Cp4.1LG19g01630	Cucurbita pepo (Zucchini)	cpelsiB391
Lsi01G016200	Cp4.1LG10g07380	Cucurbita pepo (Zucchini)	cpelsiB048
Lsi01G016200	CsGy4G015920	Cucumber (Gy14) v2	cgyblsiB236
Lsi01G016200	Carg12648	Silver-seed gourd	carlsiB258
Lsi01G016200	Carg19520	Silver-seed gourd	carlsiB571
Lsi01G016200	CsaV3_4G027220	Cucumber (Chinese Long) v3	cuclsiB272

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G016200	Melon (DHL92) v3.6.1	lsimedB147
Lsi01G016200	Silver-seed gourd	carlsiB015
Lsi01G016200	Silver-seed gourd	carlsiB139
Lsi01G016200	Silver-seed gourd	carlsiB231
Lsi01G016200	Silver-seed gourd	carlsiB911
Lsi01G016200	Cucumber (Chinese Long) v3	cuclsiB186
Lsi01G016200	Watermelon (97103) v2	lsiwmbB117
Lsi01G016200	Watermelon (97103) v2	lsiwmbB122
Lsi01G016200	Wax gourd	lsiwgoB151
Lsi01G016200	Bottle gourd (USVL1VR-Ls)	lsilsiB071
Lsi01G016200	Bottle gourd (USVL1VR-Ls)	lsilsiB072
Lsi01G016200	Cucumber (Gy14) v1	cgylsiB293
Lsi01G016200	Cucurbita maxima (Rimu)	cmalsiB231
Lsi01G016200	Cucurbita maxima (Rimu)	cmalsiB270
Lsi01G016200	Cucurbita maxima (Rimu)	cmalsiB406
Lsi01G016200	Cucurbita maxima (Rimu)	cmalsiB601
Lsi01G016200	Cucurbita maxima (Rimu)	cmalsiB641
Lsi01G016200	Cucurbita maxima (Rimu)	cmalsiB748
Lsi01G016200	Cucurbita moschata (Rifu)	cmolsiB219
Lsi01G016200	Cucurbita moschata (Rifu)	cmolsiB259
Lsi01G016200	Cucurbita moschata (Rifu)	cmolsiB391
Lsi01G016200	Cucurbita moschata (Rifu)	cmolsiB629
Lsi01G016200	Cucurbita moschata (Rifu)	cmolsiB741
Lsi01G016200	Cucurbita pepo (Zucchini)	cpelsiB328
Lsi01G016200	Cucurbita pepo (Zucchini)	cpelsiB492
Lsi01G016200	Cucurbita pepo (Zucchini)	cpelsiB703
Lsi01G016200	Wild cucumber (PI 183967)	cpilsiB168
Lsi01G016200	Cucumber (Chinese Long) v2	culsiB169
Lsi01G016200	Melon (DHL92) v3.5.1	lsimeB141
Lsi01G016200	Watermelon (Charleston Gray)	lsiwcgB119
Lsi01G016200	Watermelon (Charleston Gray)	lsiwcgB124
Lsi01G016200	Watermelon (97103) v1	lsiwmB128
Lsi01G016200	Cucumber (Gy14) v2	cgyblsiB154