Lsi01G015690 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATACCAAGATGATGAACGCCAAACCTATGGCCATGCCCACCACCATATTGATCGGAAACTAAACTTCAATGCCCCCCTTTTGACCACTCGCCGCCCCGCTGCCAATGTTGGTCTCGATCGTCTGAGTATCCCTGGCTCTGCTCGAATATCGTCGTCGACGACTAGTGATAGAGTTCCATTTTGTTGGGAGCAAGCTCCGGGTAGGCCAAAGGAGTACGTTGAGAGATGTCACGATACTACTCACGGTGACGACGCCACCACTCCCCGTCCTACACTTCCACCTGGATGGTGGCGGCCGCCTATTCAAACAAGTAGGGTTTATGAACTTTTTCGAGATGATAGATTATATTATTTTGAATTGTGTAGTTAGGTTATGAATTTAGTTGCAATTTCATTTCCTAGTTTTGAAATTTCGTTGGTAGGATTTAAACTTAATTTCAATTTTGTTGTTTCTAGTATTTTAAAGTTTTAGATGTACAGTTTAGTATTTAAAACTCGTAAATGGTCTCACGATATTGACATATTTATGTACGCCATAACAACTCGTGAGCTCATATTAGGATTTATAGTTTAGTATAAAATATATATATATATATATATATATATATATATATATATATATATATATTTGTGATGTTTGATATATTATAGAAAAAAAATTAAAACTTTATATAAAGATTACAAAAAGTGACCTGCAAAATTGAAACTAAACCTAAATCGTCTAAAACTGAAAATGGTTAAACTATAGGAACCAAATTAAAATTATAATCAATTATAAAAACTATATAGGACTAGTTGTTAACCGTCCATATTCAAGTTGAGATTTAACGTAGATTATCTATGTTATAACATTCTATCGCATCAAAGCTATCATCTTAATGTTCTCTTTCCTAAATTTTAGGAAGAAACTCTAGACATTTTCATTGCAACGACCGTAGATGTGATGACAATCTAGATGGTGATGATGATAATGACGACAACTCTAGCGGCAGTGGCTATGTCTTGTCTGATGCCATGGATGTCTTCTCATTATCGGAGGCCATTGACATAGTCGAGAAGGCCGAGATAGCACATAAATTTTCCGATGAGTTGAAGTTAAAGGAGTTAAAGTTATACGAAGAAGATGACGAAGAAGAGAGAAACGACGGTAGTTACAACCGCTCGTCAAATTTCATGATCGAGCGGTTTCTACCCGATGCAACGGCATTGGCAGCGTCCTCGGTGTTGAACCACCACGCTTTCTCACCACAAAGGGTGACGAAGCGGCCATTTTCTCCGCCAAAGGGTTGTGGGCTAGACGTGCTGTTTCCATGGCGGATAAAGCATCATCATCAGCTGTGTGGAGTGAAGAGTCCGGTGAGGGACGGTGGCCGGAGTTTGGGATCAAAATCTTCTGCAAAACAAAAGAAACATCATTAG ATGGAATACCAAGATGATGAACGCCAAACCTATGGCCATGCCCACCACCATATTGATCGGAAACTAAACTTCAATGCCCCCCTTTTGACCACTCGCCGCCCCGCTGCCAATGTTGGTCTCGATCGTCTGAGTATCCCTGGCTCTGCTCGAATATCGTCGTCGACGACTAGTGATAGAGTTCCATTTTGTTGGGAGCAAGCTCCGGGTAGGCCAAAGGAGTACGTTGAGAGATGTCACGATACTACTCACGGTGACGACGCCACCACTCCCCGTCCTACACTTCCACCTGGATGGTGGCGGCCGCCTATTCAAACAAGAAGAAACTCTAGACATTTTCATTGCAACGACCGTAGATGTGATGACAATCTAGATGGTGATGATGATAATGACGACAACTCTAGCGGCAGTGGCTATGTCTTGTCTGATGCCATGGATGTCTTCTCATTATCGGAGGCCATTGACATAGTCGAGAAGGCCGAGATAGCACATAAATTTTCCGATGAGTTGAAGTTAAAGGAGTTAAAGTTATACGAAGAAGATGACGAAGAAGAGAGAAACGACGGTAGTTACAACCGCTCGTCAAATTTCATGATCGAGCGGTTTCTACCCGATGCAACGGCATTGGCAGCGTCCTCGGTGTTGAACCACCACGCTTTCTCACCACAAAGGGTGACGAAGCGGCCATTTTCTCCGCCAAAGGGTTGTGGGCTAGACGTGCTGTTTCCATGGCGGATAAAGCATCATCATCAGCTGTGTGGAGTGAAGAGTCCGGTGAGGGACGGTGGCCGGAGTTTGGGATCAAAATCTTCTGCAAAACAAAAGAAACATCATTAG ATGGAATACCAAGATGATGAACGCCAAACCTATGGCCATGCCCACCACCATATTGATCGGAAACTAAACTTCAATGCCCCCCTTTTGACCACTCGCCGCCCCGCTGCCAATGTTGGTCTCGATCGTCTGAGTATCCCTGGCTCTGCTCGAATATCGTCGTCGACGACTAGTGATAGAGTTCCATTTTGTTGGGAGCAAGCTCCGGGTAGGCCAAAGGAGTACGTTGAGAGATGTCACGATACTACTCACGGTGACGACGCCACCACTCCCCGTCCTACACTTCCACCTGGATGGTGGCGGCCGCCTATTCAAACAAGAAGAAACTCTAGACATTTTCATTGCAACGACCGTAGATGTGATGACAATCTAGATGGTGATGATGATAATGACGACAACTCTAGCGGCAGTGGCTATGTCTTGTCTGATGCCATGGATGTCTTCTCATTATCGGAGGCCATTGACATAGTCGAGAAGGCCGAGATAGCACATAAATTTTCCGATGAGTTGAAGTTAAAGGAGTTAAAGTTATACGAAGAAGATGACGAAGAAGAGAGAAACGACGGTAGTTACAACCGCTCGTCAAATTTCATGATCGAGCGGTTTCTACCCGATGCAACGGCATTGGCAGCGTCCTCGGTGTTGAACCACCACGCTTTCTCACCACAAAGGGTGACGAAGCGGCCATTTTCTCCGCCAAAGGGTTGTGGGCTAGACGTGCTGTTTCCATGGCGGATAAAGCATCATCATCAGCTGTGTGGAGTGAAGAGTCCGGTGAGGGACGGTGGCCGGAGTTTGGGATCAAAATCTTCTGCAAAACAAAAGAAACATCATTAG MEYQDDERQTYGHAHHHIDRKLNFNAPLLTTRRPAANVGLDRLSIPGSARISSSTTSDRVPFCWEQAPGRPKEYVERCHDTTHGDDATTPRPTLPPGWWRPPIQTRRNSRHFHCNDRRCDDNLDGDDDNDDNSSGSGYVLSDAMDVFSLSEAIDIVEKAEIAHKFSDELKLKELKLYEEDDEEERNDGSYNRSSNFMIERFLPDATALAASSVLNHHAFSPQRVTKRPFSPPKGCGLDVLFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH
BLAST of Lsi01G015690 vs. TrEMBL
Match: A0A0A0KY11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312800 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 1.4e-133 Identity = 241/280 (86.07%), Postives = 254/280 (90.71%), Query Frame = 1
BLAST of Lsi01G015690 vs. TrEMBL
Match: A0A061ERW8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021624 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.6e-49 Identity = 135/275 (49.09%), Postives = 170/275 (61.82%), Query Frame = 1
BLAST of Lsi01G015690 vs. TrEMBL
Match: B9SKY5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0847320 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 5.8e-39 Identity = 124/280 (44.29%), Postives = 156/280 (55.71%), Query Frame = 1
BLAST of Lsi01G015690 vs. TrEMBL
Match: A0A067JTI2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00436 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.2e-38 Identity = 120/281 (42.70%), Postives = 160/281 (56.94%), Query Frame = 1
BLAST of Lsi01G015690 vs. TrEMBL
Match: W9R1U0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013993 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38 Identity = 126/298 (42.28%), Postives = 170/298 (57.05%), Query Frame = 1
BLAST of Lsi01G015690 vs. TAIR10
Match: AT3G51760.1 (AT3G51760.1 Protein of unknown function (DUF688)) HSP 1 Score: 90.1 bits (222), Expect = 2.3e-18 Identity = 85/247 (34.41%), Postives = 119/247 (48.18%), Query Frame = 1
BLAST of Lsi01G015690 vs. NCBI nr
Match: gi|659128464|ref|XP_008464220.1| (PREDICTED: uncharacterized protein LOC103502152 [Cucumis melo]) HSP 1 Score: 486.1 bits (1250), Expect = 4.1e-134 Identity = 241/280 (86.07%), Postives = 257/280 (91.79%), Query Frame = 1
BLAST of Lsi01G015690 vs. NCBI nr
Match: gi|778697689|ref|XP_011654375.1| (PREDICTED: uncharacterized protein LOC105435371 [Cucumis sativus]) HSP 1 Score: 483.8 bits (1244), Expect = 2.0e-133 Identity = 241/280 (86.07%), Postives = 254/280 (90.71%), Query Frame = 1
BLAST of Lsi01G015690 vs. NCBI nr
Match: gi|590628036|ref|XP_007026610.1| (Uncharacterized protein TCM_021624 [Theobroma cacao]) HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49 Identity = 135/275 (49.09%), Postives = 170/275 (61.82%), Query Frame = 1
BLAST of Lsi01G015690 vs. NCBI nr
Match: gi|1009134283|ref|XP_015884361.1| (PREDICTED: uncharacterized protein LOC107420014 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42 Identity = 129/289 (44.64%), Postives = 168/289 (58.13%), Query Frame = 1
BLAST of Lsi01G015690 vs. NCBI nr
Match: gi|1009134281|ref|XP_015884360.1| (PREDICTED: uncharacterized protein LOC107420014 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 179.5 bits (454), Expect = 8.1e-42 Identity = 129/293 (44.03%), Postives = 168/293 (57.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |