Lsi01G014730 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G014730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_22
Location	chr01 : 12804019 .. 12804789 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGATCGACGCCCTTCGTCGGTTTCTCCTCCCCTGTTTCTTTCCCCCCACCGCCACAACCGCCGCCGCCGCCTCCGCCGCCTCCGCCGTTCCCAAGAAACGTCTAAGCACCTCGCTTCGCGATGACGTCGAAGCCACCACCACCGCCACCGCCAATGGGGATCTAACCCACGATCAAGATTCCGCCCAAGATTCTCCGACCACCACTCCCGACAGCGTCACGCCGAAGTTCGCCGCCACCGCCGCCATCGTAGCCCCACCGCGGCCTTCGAAAACCATGGTCATCGGAACCATCTTCGGCCACCGGCGTGGACACGTGTGGTTCTGCGTCCAACATGACCGCCTCCGGAACAAGCCGTTTCTCCTCCTCGAGTTTCCGATTCTGACTCACCAACTCGTTAACGAAATGCGGTTCGGACTCGTTCGAATCGCACTCGAGTGCAACCGGGTCGAACTCGGATTTTGCCCGCTTCGTTCGATTCCCATCTGGGCAATGTCCTGCAATGGGCGGAAACTCGGGTTCGCGGCGAAGAAAAAAGCCGGTGACCCGGTCCGGTCCATGTTGAAGACAATGCAATCGACAACGGTTGGAGCCGGTGTAATGCCATCCGGATTCGGGTCGGGCTCGGAAGAGGTTATGTACATGAGAGCTAATTATGAGCACGTGGTGGGGAGTGCTGACTCGGAATCGTTTCATCTTATCAACCCGGACGAGTGCCCGAGTCAAGAACTCAGTATCTTCTTGCTCAGATCTCGAAATGGGTAA

mRNA sequence

ATGGCCAAGATCGACGCCCTTCGTCGGTTTCTCCTCCCCTGTTTCTTTCCCCCCACCGCCACAACCGCCGCCGCCGCCTCCGCCGCCTCCGCCGTTCCCAAGAAACGTCTAAGCACCTCGCTTCGCGATGACGTCGAAGCCACCACCACCGCCACCGCCAATGGGGATCTAACCCACGATCAAGATTCCGCCCAAGATTCTCCGACCACCACTCCCGACAGCGTCACGCCGAAGTTCGCCGCCACCGCCGCCATCGTAGCCCCACCGCGGCCTTCGAAAACCATGGTCATCGGAACCATCTTCGGCCACCGGCGTGGACACGTGTGGTTCTGCGTCCAACATGACCGCCTCCGGAACAAGCCGTTTCTCCTCCTCGAGTTTCCGATTCTGACTCACCAACTCGTTAACGAAATGCGGTTCGGACTCGTTCGAATCGCACTCGAGTGCAACCGGGTCGAACTCGGATTTTGCCCGCTTCGTTCGATTCCCATCTGGGCAATGTCCTGCAATGGGCGGAAACTCGGGTTCGCGGCGAAGAAAAAAGCCGGTGACCCGGTCCGGTCCATGTTGAAGACAATGCAATCGACAACGGTTGGAGCCGGTGTAATGCCATCCGGATTCGGGTCGGGCTCGGAAGAGGTTATGTACATGAGAGCTAATTATGAGCACGTGGTGGGGAGTGCTGACTCGGAATCGTTTCATCTTATCAACCCGGACGAGTGCCCGAGTCAAGAACTCAGTATCTTCTTGCTCAGATCTCGAAATGGGTAA

Coding sequence (CDS)

ATGGCCAAGATCGACGCCCTTCGTCGGTTTCTCCTCCCCTGTTTCTTTCCCCCCACCGCCACAACCGCCGCCGCCGCCTCCGCCGCCTCCGCCGTTCCCAAGAAACGTCTAAGCACCTCGCTTCGCGATGACGTCGAAGCCACCACCACCGCCACCGCCAATGGGGATCTAACCCACGATCAAGATTCCGCCCAAGATTCTCCGACCACCACTCCCGACAGCGTCACGCCGAAGTTCGCCGCCACCGCCGCCATCGTAGCCCCACCGCGGCCTTCGAAAACCATGGTCATCGGAACCATCTTCGGCCACCGGCGTGGACACGTGTGGTTCTGCGTCCAACATGACCGCCTCCGGAACAAGCCGTTTCTCCTCCTCGAGTTTCCGATTCTGACTCACCAACTCGTTAACGAAATGCGGTTCGGACTCGTTCGAATCGCACTCGAGTGCAACCGGGTCGAACTCGGATTTTGCCCGCTTCGTTCGATTCCCATCTGGGCAATGTCCTGCAATGGGCGGAAACTCGGGTTCGCGGCGAAGAAAAAAGCCGGTGACCCGGTCCGGTCCATGTTGAAGACAATGCAATCGACAACGGTTGGAGCCGGTGTAATGCCATCCGGATTCGGGTCGGGCTCGGAAGAGGTTATGTACATGAGAGCTAATTATGAGCACGTGGTGGGGAGTGCTGACTCGGAATCGTTTCATCTTATCAACCCGGACGAGTGCCCGAGTCAAGAACTCAGTATCTTCTTGCTCAGATCTCGAAATGGGTAA

Protein sequence

MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHDQDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNKPFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKKKAGDPVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDECPSQELSIFLLRSRNG

Homology

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BLAST of Lsi01G014730 vs. Swiss-Prot
Match: MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.7e-33
Identity = 82/169 (48.52%), Postives = 106/169 (62.72%), Query Frame = 1


Query: 96  VIGTIFGHRRGHVWFCVQHDRLRNKPFLLLEFPILTHQLVNEMRFGLVRIALECNRVELG 155
           V GT++GH+RGHV F VQ+++ R+ P LLL+  + T  LV EM  GLVRIALEC +    
Sbjct: 129 VTGTLYGHKRGHVTFSVQYNQ-RSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRS 188

Query: 156 FCPLRSIPIWAMSCNGRKLGFAAKKKAG--DPVRSMLKTMQSTTVGAGVMP--------S 215
              L   P W M CNGRK G+A  +     D    +L T+   TVGAGV+P        S
Sbjct: 189 GTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVS 248

Query: 216 GFGSGSE--EVMYMRANYEHVVGSADSESFHLINPDECPSQELSIFLLR 253
           G GSG+E  E++YMR  +E VVGS DSE+F+++NPD+    ELSIFLLR
Sbjct: 249 GVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLR 296

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BLAST of Lsi01G014730 vs. TrEMBL
Match: A0A0A0KXC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297500 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 1.7e-125
Identity = 235/256 (91.80%), Postives = 240/256 (93.75%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           MAKIDALRRFLLPCFFPPTA TAAA+SA   VPKKRLSTSLRDD+E TTTAT N D TH 
Sbjct: 1   MAKIDALRRFLLPCFFPPTAATAAASSA---VPKKRLSTSLRDDLE-TTTATLNEDPTH- 60

Query: 61  QDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120
               QDSP TTPDSVTPKFA +A+IVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK
Sbjct: 61  ---GQDSPATTPDSVTPKFAVSASIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120

Query: 121 PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK 180
           PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK
Sbjct: 121 PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK 180

Query: 181 KAGDPVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDE 240
           KAG+PVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDE
Sbjct: 181 KAGEPVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDE 240

Query: 241 CPSQELSIFLLRSRNG 257
           CP QELSIFLLRSRNG
Sbjct: 241 CPGQELSIFLLRSRNG 248

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BLAST of Lsi01G014730 vs. TrEMBL
Match: W9QQT8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016958 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.0e-83
Identity = 170/257 (66.15%), Postives = 200/257 (77.82%), Query Frame = 1


Query: 6   ALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHDQDSAQ 65
           A+RR LLPCF P T +   A +  +   KKRLSTSLRDD              +DQDS+ 
Sbjct: 4   AIRRLLLPCFCPATVSDGGATAVTTT--KKRLSTSLRDD-------NPQDPNDNDQDSSP 63

Query: 66  DSPTTTP--DSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNKPFL 125
            SP+++P  DS+   F  ++A  A PRPSK+MVIGTIFG RRGHVWFC+QHDRL +KP +
Sbjct: 64  -SPSSSPTADSIFFFFPPSSAAPAQPRPSKSMVIGTIFGARRGHVWFCIQHDRLSSKPLI 123

Query: 126 LLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKKKAG 185
           LLEFPI+THQLVNEMRFG+VRIALEC+R +LG CPLRS+P+W M CNGR+LGFAA+++A 
Sbjct: 124 LLEFPIVTHQLVNEMRFGIVRIALECDRSDLGACPLRSVPVWTMFCNGRQLGFAARRRAS 183

Query: 186 DPVRSMLKTMQSTTVGAGVMP--SG--FGSGSEEVMYMRANYEHVVGSADSESFHLINPD 245
           D V+ MLKTM STTVGAGVMP  SG   GS SEEVMYMRANYEH+VGSADSESF+LINPD
Sbjct: 184 DWVKLMLKTMSSTTVGAGVMPIRSGLELGSASEEVMYMRANYEHMVGSADSESFYLINPD 243

Query: 246 ECPSQELSIFLLRSRNG 257
           ECPSQELS+FLLRS NG
Sbjct: 244 ECPSQELSVFLLRSGNG 250

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BLAST of Lsi01G014730 vs. TrEMBL
Match: M5W5C4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026820mg PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.0e-81
Identity = 164/263 (62.36%), Postives = 195/263 (74.14%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           M KIDA+RRF++PCF P   TT +A +      KKRLSTSLRDD++    AT+      D
Sbjct: 1   MTKIDAIRRFIIPCFSPTKKTTHSAGT------KKRLSTSLRDDLDDIDAATSKTHDPRD 60

Query: 61  QDSAQDSPTTTPDSVTPKFAATAAIVAP--PRPSKTMVIGTIFGHRRGHVWFCVQHDRLR 120
           QDS   SPTT  D+V        + +AP  PRPSK+MVIGTIFGHR GHVWFC+QHDRL 
Sbjct: 61  QDSQSSSPTTENDAV--------STIAPQQPRPSKSMVIGTIFGHRLGHVWFCIQHDRLS 120

Query: 121 NKPFLLLEFPILTHQLVNEMRFGLVRIALECN---RVELGFCPLRSIPIWAMSCNGRKLG 180
            KP LLLE  I THQLVNEMRFGLVR+ LEC+   R +L  CPL S+P+W + CNGR+LG
Sbjct: 121 TKPTLLLELSIKTHQLVNEMRFGLVRVTLECDESGRSQLATCPLHSVPLWTVHCNGRQLG 180

Query: 181 FAAKKKAGDPVRSMLKTMQSTTVGAGVMPSGFG---SGSEEVMYMRANYEHVVGSADSES 240
           FA +++A D V+ MLKTMQSTTVGAGVMP+G+G      +EVMYMRANYEHVVGSADSES
Sbjct: 181 FAGRRRASDKVKLMLKTMQSTTVGAGVMPTGYGLESDSGQEVMYMRANYEHVVGSADSES 240

Query: 241 FHLINPDECPSQELSIFLLRSRN 256
           FHLINPD+ P QELS+FLLRS++
Sbjct: 241 FHLINPDQYPGQELSVFLLRSKH 249

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BLAST of Lsi01G014730 vs. TrEMBL
Match: F6HL26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01260 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.5e-78
Identity = 162/256 (63.28%), Postives = 185/256 (72.27%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           M KIDALRR +LPCF   +ATT  +++   A  KKRLSTSLRDD++              
Sbjct: 1   MTKIDALRRCILPCF---SATTTVSSTTTIATTKKRLSTSLRDDIQ-------------- 60

Query: 61  QDSAQDSPTTTPDSVTP-KFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRN 120
           +D  QD+P    DS T  +   T    AP RPSKTMVIGTIFGHRRGHVWFCVQHDRL  
Sbjct: 61  EDHLQDNPENDEDSTTTDESIPTHPHQAPARPSKTMVIGTIFGHRRGHVWFCVQHDRLNT 120

Query: 121 KPFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAK 180
           KP LLLE  I THQLV EMR GLVRIALEC+R +L  CPL S+P+W M CNGRKLGFA +
Sbjct: 121 KPSLLLELSIPTHQLVKEMRCGLVRIALECDRSDLSSCPLHSVPVWTMYCNGRKLGFAIR 180

Query: 181 KKAGDPVRSMLKTMQSTTVGAGVMPSGFGS-GSEEVMYMRANYEHVVGSADSESFHLINP 240
           +K  +  R MLKTMQS TVGAGV+P+G GS G  E+MYMRANYE VVGS DSESFHLINP
Sbjct: 181 RKPTENNRVMLKTMQSMTVGAGVIPAGLGSDGDGELMYMRANYECVVGSCDSESFHLINP 239

Query: 241 DECPSQELSIFLLRSR 255
           D+CP QELS+FLLR+R
Sbjct: 241 DDCPGQELSVFLLRTR 239

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BLAST of Lsi01G014730 vs. TrEMBL
Match: A0A061EYN7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021839 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.9e-77
Identity = 158/254 (62.20%), Postives = 182/254 (71.65%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           M K DALRR L+PCF+P    + A  +      KKRLSTSLRDD++   T T       D
Sbjct: 1   MTKFDALRR-LIPCFYPTPTNSIATITPT----KKRLSTSLRDDLDDPITIT-----NQD 60

Query: 61  QDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120
           QD      T T D  T         +AP RPS++MVIGTIFG R+GHVWFC+QHDRL  K
Sbjct: 61  QDKDSQDSTNTTDLET-------TTLAPARPSRSMVIGTIFGQRKGHVWFCIQHDRLSTK 120

Query: 121 PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK 180
           P LLLE PI THQLV EMR+G+VRIALEC+  EL  CPL S+P+W M CNGRK+GFA K+
Sbjct: 121 PSLLLELPIPTHQLVQEMRYGIVRIALECDHSELSACPLHSVPLWTMYCNGRKIGFATKR 180

Query: 181 KAGDPVRSMLKTMQSTTVGAGVMPSGFG-SGSEEVMYMRANYEHVVGSADSESFHLINPD 240
           KA      MLKTMQSTTVGAGV+P+GFG SGSEE+MYMRANYEHVVG ADSESFHL+NPD
Sbjct: 181 KASHHNLLMLKTMQSTTVGAGVIPAGFGSSGSEEIMYMRANYEHVVGDADSESFHLVNPD 237

Query: 241 ECPSQELSIFLLRS 254
           EC  QELS+FL+RS
Sbjct: 241 ECTGQELSVFLMRS 237

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BLAST of Lsi01G014730 vs. TAIR10
Match: AT2G37880.1 (AT2G37880.1 Protein of unknown function, DUF617)

HSP 1 Score: 273.9 bits (699), Expect = 1.0e-73
Identity = 152/260 (58.46%), Postives = 183/260 (70.38%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           M KID+LRRFLLPC   PT  T  + ++  A  KKRLSTSLRDD++              
Sbjct: 1   MTKIDSLRRFLLPCISTPTNPTTVSTTSTGA-SKKRLSTSLRDDIDV------------- 60

Query: 61  QDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120
           QDSA  S +++ ++ +    + +A+  P RPSKTMVIGTIFG R+GHVWFCVQHDRL  K
Sbjct: 61  QDSASSSASSS-EATSAVDYSISAVTVPQRPSKTMVIGTIFGRRKGHVWFCVQHDRLSVK 120

Query: 121 PFLLLEFPILTHQLVNEMRFGLVRIALEC-NRVELGFCPLRSIPIWAMSCNGRKLGFAAK 180
           P LLLE  I T QLV+EM  GLVR+ALEC  R EL  C LRS+P+W M CNGRKLGFA +
Sbjct: 121 PILLLELSIATSQLVHEMGSGLVRVALECPTRPELKSCLLRSVPVWTMFCNGRKLGFAVR 180

Query: 181 KKAGDPVRSMLKTMQSTTVGAGVMPSGFGSG------SEEVMYMRANYEHVVGSADSESF 240
           + A +  R MLK ++S TVGAGV+PSG G G      ++EVMYMRANYEHVVGS+DSESF
Sbjct: 181 RSANEETRMMLKRLESMTVGAGVLPSGSGLGGSDESDTDEVMYMRANYEHVVGSSDSESF 240

Query: 241 HLINPDECPSQELSIFLLRS 254
           HLINPD   +QELSIFLLR+
Sbjct: 241 HLINPDANSAQELSIFLLRT 245

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BLAST of Lsi01G014730 vs. TAIR10
Match: AT1G21050.1 (AT1G21050.1 Protein of unknown function, DUF617)

HSP 1 Score: 149.4 bits (376), Expect = 2.9e-36
Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 1


Query: 92  SKTMVIGTIFGHRRGHVWFCVQHDRLRNKPFLLLEFPILTHQLVNEM-RFGLVRIALECN 151
           S + V GT FGHRRG V FC+Q   + + P LLLE  + T  L  EM   G++RIALEC+
Sbjct: 83  SSSTVSGTFFGHRRGRVSFCLQDAAVGSSPLLLLELAVPTAALAKEMDEEGVLRIALECD 142

Query: 152 RVELGFCPLRSI---PIWAMSCNGRKLGFAAKKKAGDPVRSMLKTMQSTTVGAGVMPSGF 211
           R         SI   P+W+M CNGRK+GFA ++K  +     L+ MQS +VGAGV+PS  
Sbjct: 143 RRRSSNSRSSSIFDVPVWSMFCNGRKMGFAVRRKVTENDAVFLRMMQSVSVGAGVVPS-- 202

Query: 212 GSGSEEVMYMRANYEHVVGSADSESFHLINPDECPSQELSIFLLRS 254
               ++++Y+RA +E V GS+DSESFH++NP     QELSIFLLRS
Sbjct: 203 -EEEDQMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLRS 245

[Close]

BLAST of Lsi01G014730 vs. TAIR10
Match: AT2G41660.1 (AT2G41660.1 Protein of unknown function, DUF617)

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34
Identity = 82/169 (48.52%), Postives = 106/169 (62.72%), Query Frame = 1


Query: 96  VIGTIFGHRRGHVWFCVQHDRLRNKPFLLLEFPILTHQLVNEMRFGLVRIALECNRVELG 155
           V GT++GH+RGHV F VQ+++ R+ P LLL+  + T  LV EM  GLVRIALEC +    
Sbjct: 129 VTGTLYGHKRGHVTFSVQYNQ-RSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRS 188

Query: 156 FCPLRSIPIWAMSCNGRKLGFAAKKKAG--DPVRSMLKTMQSTTVGAGVMP--------S 215
              L   P W M CNGRK G+A  +     D    +L T+   TVGAGV+P        S
Sbjct: 189 GTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVS 248

Query: 216 GFGSGSE--EVMYMRANYEHVVGSADSESFHLINPDECPSQELSIFLLR 253
           G GSG+E  E++YMR  +E VVGS DSE+F+++NPD+    ELSIFLLR
Sbjct: 249 GVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLR 296

[Close]

BLAST of Lsi01G014730 vs. TAIR10
Match: AT1G76610.1 (AT1G76610.1 Protein of unknown function, DUF617)

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-33
Identity = 83/192 (43.23%), Postives = 115/192 (59.90%), Query Frame = 1


Query: 65  QDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHD-RLRNKPFL 124
           Q  PT   D+V+   + +++       +  +V GT +GHRRGHV FC+Q D R  + P L
Sbjct: 50  QPPPTDQNDTVSVSSSTSSS-----DQTGVVVTGTFYGHRRGHVSFCLQDDTRPSSPPLL 109

Query: 125 LLEFPILTHQLVNEMRFGLVRIAL--ECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKKK 184
           LLE  + T  L  EM  G +RIAL  + NR    F    ++P+W+M CNGRK GFA +++
Sbjct: 110 LLELAVPTAALAREMEEGFLRIALRSKSNRRSSIF----NVPVWSMYCNGRKFGFAVRRE 169

Query: 185 AGDPVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDEC 244
             +     L+ MQS +VGAGV+P+G      E +Y+RA +E V GS+DSESFH++N    
Sbjct: 170 TTENDVGFLRLMQSVSVGAGVIPNG------ETLYLRAKFERVTGSSDSESFHMVNQGGG 226

Query: 245 PSQELSIFLLRS 254
             QELSIFL RS
Sbjct: 230 YGQELSIFLSRS 226

[Close]

BLAST of Lsi01G014730 vs. TAIR10
Match: AT5G23100.1 (AT5G23100.1 Protein of unknown function, DUF617)

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30
Identity = 73/188 (38.83%), Postives = 104/188 (55.32%), Query Frame = 1


Query: 96  VIGTIFGHRRGHVWFCVQHDRLRNKPFLLLEFPILTHQLVNEMRFGLVRIALECNR---- 155
           V+GT+FG RRGHV F +Q D   + P  L+E       LV EM  GLVRIALEC++    
Sbjct: 90  VVGTLFGSRRGHVHFSIQKDP-NSPPAFLIELATPISGLVKEMASGLVRIALECDKGKEE 149

Query: 156 --------------------VELGFCPLRSI--PIWAMSCNGRKLGFAAKKKAGDPVRSM 215
                                       R +  P+W   CNG+K GFA +++ G+  + +
Sbjct: 150 EEGEEKNGTLRHGGGDKTKTTTTAAVSRRLVEEPMWRTYCNGKKCGFATRRECGEKEKKV 209

Query: 216 LKTMQSTTVGAGVMPS-----GFGSGSEEVMYMRANYEHVVGSADSESFHLINPDECPSQ 253
           LK ++  ++GAGV+P      G G G  ++MYMRA +E +VGS DSE+F+++NPD   + 
Sbjct: 210 LKALEMVSMGAGVLPETEEIGGGGGGGGDIMYMRAKFERIVGSRDSEAFYMMNPDSNGAP 269

[Close]

BLAST of Lsi01G014730 vs. NCBI nr
Match: gi|778693551|ref|XP_004142185.2| (PREDICTED: protein MIZU-KUSSEI 1 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 2.4e-125
Identity = 235/256 (91.80%), Postives = 240/256 (93.75%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           MAKIDALRRFLLPCFFPPTA TAAA+SA   VPKKRLSTSLRDD+E TTTAT N D TH 
Sbjct: 1   MAKIDALRRFLLPCFFPPTAATAAASSA---VPKKRLSTSLRDDLE-TTTATLNEDPTH- 60

Query: 61  QDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120
               QDSP TTPDSVTPKFA +A+IVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK
Sbjct: 61  ---GQDSPATTPDSVTPKFAVSASIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120

Query: 121 PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK 180
           PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK
Sbjct: 121 PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK 180

Query: 181 KAGDPVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDE 240
           KAG+PVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDE
Sbjct: 181 KAGEPVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDE 240

Query: 241 CPSQELSIFLLRSRNG 257
           CP QELSIFLLRSRNG
Sbjct: 241 CPGQELSIFLLRSRNG 248

[Close]

BLAST of Lsi01G014730 vs. NCBI nr
Match: gi|659069151|ref|XP_008448402.1| (PREDICTED: protein MIZU-KUSSEI 1 [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 3.9e-123
Identity = 232/256 (90.62%), Postives = 238/256 (92.97%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           MAKIDALRRFLLPCFFPPTA TAAA+S    VPKKRLSTSLRDD+E TTTAT + D TH 
Sbjct: 1   MAKIDALRRFLLPCFFPPTAATAAASST---VPKKRLSTSLRDDLE-TTTATVSEDPTH- 60

Query: 61  QDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120
              AQDSP TTPDSVTPKFA +A+IVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK
Sbjct: 61  ---AQDSPATTPDSVTPKFAISASIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120

Query: 121 PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK 180
           PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK
Sbjct: 121 PFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKK 180

Query: 181 KAGDPVRSMLKTMQSTTVGAGVMPSGFGSGSEEVMYMRANYEHVVGSADSESFHLINPDE 240
           KAG+ VRSMLKTMQSTTVGAGVMPSG GSGSEEVMYMRANYEHVVGSADSESFHLINPDE
Sbjct: 181 KAGESVRSMLKTMQSTTVGAGVMPSGLGSGSEEVMYMRANYEHVVGSADSESFHLINPDE 240

Query: 241 CPSQELSIFLLRSRNG 257
           CP QELSIFLLRSRNG
Sbjct: 241 CPGQELSIFLLRSRNG 248

[Close]

BLAST of Lsi01G014730 vs. NCBI nr
Match: gi|1009157922|ref|XP_015897009.1| (PREDICTED: protein MIZU-KUSSEI 1 [Ziziphus jujuba])

HSP 1 Score: 343.6 bits (880), Expect = 3.0e-91
Identity = 180/262 (68.70%), Postives = 203/262 (77.48%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDV-EATTTATANGDLTH 60
           M KIDALRRFL+PCFFP + TT  + +  +  PKKRLSTSLRDD  +   T      ++ 
Sbjct: 1   MTKIDALRRFLMPCFFPTSTTTTTSTTIPTHRPKKRLSTSLRDDYPQDPPTKPQQTPISQ 60

Query: 61  D--QDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRL 120
           +  QDS   SPTTT  +            APPRPSKTMVIGTIFGHRRGHVWFCVQHDRL
Sbjct: 61  ENHQDSQSSSPTTTISA------------APPRPSKTMVIGTIFGHRRGHVWFCVQHDRL 120

Query: 121 RNKPFLLLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFA 180
             KPFLLLE P+LTHQLVNEMRFGLVRIALEC+R EL  CPLRS+P+W + CN R+LGFA
Sbjct: 121 STKPFLLLELPLLTHQLVNEMRFGLVRIALECDRPELASCPLRSVPVWTVYCNARRLGFA 180

Query: 181 AKKKAGDPVRSMLKTMQSTTVGAGVMPSGFGSG---SEEVMYMRANYEHVVGSADSESFH 240
           AK+KA D VR MLKTMQSTTVG GV+P+GFGS    SEE+MYMR+NYEHVVGSADSESFH
Sbjct: 181 AKRKASDRVRLMLKTMQSTTVGVGVIPTGFGSSESDSEEIMYMRSNYEHVVGSADSESFH 240

Query: 241 LINPDECPSQELSIFLLRSRNG 257
           LINPDEC SQELS+FLLRSR+G
Sbjct: 241 LINPDECASQELSVFLLRSRSG 250

[Close]

BLAST of Lsi01G014730 vs. NCBI nr
Match: gi|470138864|ref|XP_004305173.1| (PREDICTED: protein MIZU-KUSSEI 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 321.2 bits (822), Expect = 1.6e-84
Identity = 170/262 (64.89%), Postives = 196/262 (74.81%), Query Frame = 1


Query: 1   MAKIDALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHD 60
           M KIDALRRFLLPCF P     +A +S+A+   KKRLSTSLRDD+              D
Sbjct: 1   MTKIDALRRFLLPCFAP-----SATSSSAATPTKKRLSTSLRDDIPDA-----------D 60

Query: 61  QDSAQDSPTTTPDSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNK 120
            DS+  +     D  +P  A+  + VA PRPSK+MVIGTIFGHRRGHVWFCVQHDRL  +
Sbjct: 61  LDSSSAAAAQDSDPSSPSAASVTSSVAQPRPSKSMVIGTIFGHRRGHVWFCVQHDRLSTR 120

Query: 121 PFLLLEFPILTHQLVNEMRFGLVRIALEC-NRVELGFCPLRSIPIWAMSCNGRKLGFAAK 180
           P LLLE  ILTHQLV EMRFGLVRI LEC +R +L  CPLRS+P+W++ CNGRKLGFAA+
Sbjct: 121 PALLLELSILTHQLVKEMRFGLVRITLECDDRSDLATCPLRSVPVWSLHCNGRKLGFAAR 180

Query: 181 KKAGDPVRSMLKTMQSTTVGAGVMPSGFGSGS------EEVMYMRANYEHVVGSADSESF 240
           +KAGD VR MLKTM+STTVGAG +P+GFG GS        VMYMRANYEHV+GSADSESF
Sbjct: 181 RKAGDKVRLMLKTMESTTVGAGALPAGFGFGSGTSDSDGPVMYMRANYEHVIGSADSESF 240

Query: 241 HLINPDECPSQELSIFLLRSRN 256
           HLINPD+CP QELS+FLLRSRN
Sbjct: 241 HLINPDQCPGQELSVFLLRSRN 246

[Close]

BLAST of Lsi01G014730 vs. NCBI nr
Match: gi|703069684|ref|XP_010088566.1| (hypothetical protein L484_016958 [Morus notabilis])

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-82
Identity = 170/257 (66.15%), Postives = 200/257 (77.82%), Query Frame = 1


Query: 6   ALRRFLLPCFFPPTATTAAAASAASAVPKKRLSTSLRDDVEATTTATANGDLTHDQDSAQ 65
           A+RR LLPCF P T +   A +  +   KKRLSTSLRDD              +DQDS+ 
Sbjct: 4   AIRRLLLPCFCPATVSDGGATAVTTT--KKRLSTSLRDD-------NPQDPNDNDQDSSP 63

Query: 66  DSPTTTP--DSVTPKFAATAAIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNKPFL 125
            SP+++P  DS+   F  ++A  A PRPSK+MVIGTIFG RRGHVWFC+QHDRL +KP +
Sbjct: 64  -SPSSSPTADSIFFFFPPSSAAPAQPRPSKSMVIGTIFGARRGHVWFCIQHDRLSSKPLI 123

Query: 126 LLEFPILTHQLVNEMRFGLVRIALECNRVELGFCPLRSIPIWAMSCNGRKLGFAAKKKAG 185
           LLEFPI+THQLVNEMRFG+VRIALEC+R +LG CPLRS+P+W M CNGR+LGFAA+++A 
Sbjct: 124 LLEFPIVTHQLVNEMRFGIVRIALECDRSDLGACPLRSVPVWTMFCNGRQLGFAARRRAS 183

Query: 186 DPVRSMLKTMQSTTVGAGVMP--SG--FGSGSEEVMYMRANYEHVVGSADSESFHLINPD 245
           D V+ MLKTM STTVGAGVMP  SG   GS SEEVMYMRANYEH+VGSADSESF+LINPD
Sbjct: 184 DWVKLMLKTMSSTTVGAGVMPIRSGLELGSASEEVMYMRANYEHMVGSADSESFYLINPD 243

Query: 246 ECPSQELSIFLLRSRNG 257
           ECPSQELS+FLLRS NG
Sbjct: 244 ECPSQELSVFLLRSGNG 250

The following BLAST results are available for this feature:

BLAST of Lsi01G014730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MIZ1_ARATH	3.7e-33	48.52	Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1	[more]

BLAST of Lsi01G014730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXC2_CUCSA	1.7e-125	91.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297500 PE=4 SV=1	[more]
W9QQT8_9ROSA	8.0e-83	66.15	Uncharacterized protein OS=Morus notabilis GN=L484_016958 PE=4 SV=1	[more]
M5W5C4_PRUPE	2.0e-81	62.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026820mg PE=4 SV=1	[more]
F6HL26_VITVI	4.5e-78	63.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01260 PE=4 SV=...	[more]
A0A061EYN7_THECC	2.9e-77	62.20	Uncharacterized protein OS=Theobroma cacao GN=TCM_021839 PE=4 SV=1	[more]

BLAST of Lsi01G014730 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37880.1	1.0e-73	58.46	Protein of unknown function, DUF617	[more]
AT1G21050.1	2.9e-36	48.80	Protein of unknown function, DUF617	[more]
AT2G41660.1	2.1e-34	48.52	Protein of unknown function, DUF617	[more]
AT1G76610.1	4.0e-33	43.23	Protein of unknown function, DUF617	[more]
AT5G23100.1	2.4e-30	38.83	Protein of unknown function, DUF617	[more]

BLAST of Lsi01G014730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778693551\|ref\|XP_004142185.2\|	2.4e-125	91.80	PREDICTED: protein MIZU-KUSSEI 1 [Cucumis sativus]	[more]
gi\|659069151\|ref\|XP_008448402.1\|	3.9e-123	90.63	PREDICTED: protein MIZU-KUSSEI 1 [Cucumis melo]	[more]
gi\|1009157922\|ref\|XP_015897009.1\|	3.0e-91	68.70	PREDICTED: protein MIZU-KUSSEI 1 [Ziziphus jujuba]	[more]
gi\|470138864\|ref\|XP_004305173.1\|	1.6e-84	64.89	PREDICTED: protein MIZU-KUSSEI 1 [Fragaria vesca subsp. vesca]	[more]
gi\|703069684\|ref\|XP_010088566.1\|	1.1e-82	66.15	hypothetical protein L484_016958 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006460	MIZ1-like_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G014730.1	Lsi01G014730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006460	Protein of unknown function DUF617, plant	PFAM	PF04759	DUF617	coord: 96..252 score: 5.4
IPR006460	Protein of unknown function DUF617, plant	TIGRFAMs	TIGR01570	TIGR01570	coord: 96..253 score: 1.0
None	No IPR available	PANTHER	PTHR31276	FAMILY NOT NAMED	coord: 7..254 score: 3.7E
None	No IPR available	PANTHER	PTHR31276:SF6	SUBFAMILY NOT NAMED	coord: 7..254 score: 3.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G014730	Csa4G297500	Cucumber (Chinese Long) v2	culsiB248
Lsi01G014730	CSPI04G15140	Wild cucumber (PI 183967)	cpilsiB247
Lsi01G014730	CmaCh03G004010	Cucurbita maxima (Rimu)	cmalsiB601
Lsi01G014730	CmoCh07G010620	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G014730	CmoCh03G004140	Cucurbita moschata (Rifu)	cmolsiB587
Lsi01G014730	Cla018173	Watermelon (97103) v1	lsiwmB152
Lsi01G014730	MELO3C003172	Melon (DHL92) v3.5.1	lsimeB151
Lsi01G014730	ClCG04G007730	Watermelon (Charleston Gray)	lsiwcgB142
Lsi01G014730	MELO3C003172.2	Melon (DHL92) v3.6.1	lsimedB158
Lsi01G014730	Cla97C04G074420	Watermelon (97103) v2	lsiwmbB140
Lsi01G014730	Cp4.1LG19g03260	Cucurbita pepo (Zucchini)	cpelsiB393
Lsi01G014730	Cp4.1LG10g08440	Cucurbita pepo (Zucchini)	cpelsiB048
Lsi01G014730	CsGy4G014530	Cucumber (Gy14) v2	cgyblsiB236
Lsi01G014730	Carg19954	Silver-seed gourd	carlsiB503
Lsi01G014730	Carg13236	Silver-seed gourd	carlsiB526
Lsi01G014730	CsaV3_4G025490	Cucumber (Chinese Long) v3	cuclsiB272

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G014730	Wax gourd	lsiwgoB169
Lsi01G014730	Bottle gourd (USVL1VR-Ls)	lsilsiB077
Lsi01G014730	Cucumber (Gy14) v1	cgylsiB059
Lsi01G014730	Cucurbita maxima (Rimu)	cmalsiB642
Lsi01G014730	Cucurbita maxima (Rimu)	cmalsiB644
Lsi01G014730	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G014730	Cucurbita moschata (Rifu)	cmolsiB630
Lsi01G014730	Cucurbita moschata (Rifu)	cmolsiB631
Lsi01G014730	Wild cucumber (PI 183967)	cpilsiB255
Lsi01G014730	Wild cucumber (PI 183967)	cpilsiB345
Lsi01G014730	Cucumber (Chinese Long) v2	culsiB341
Lsi01G014730	Watermelon (Charleston Gray)	lsiwcgB148
Lsi01G014730	Melon (DHL92) v3.6.1	lsimedB129
Lsi01G014730	Cucumber (Chinese Long) v3	cuclsiB365
Lsi01G014730	Watermelon (97103) v2	lsiwmbB146