Lsi01G012000 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G012000
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 10239547 .. 10240293 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAGTTAGGATGCACATAATTCCCAAATTAATAAATAGAATTGCACTTCATTACTAGCACCGAAAAGTTAGAGAGCTTTTATTTGGGCATTCTTTCTGTAACAGTAGAACATGCAACATGCTTAGGAGCAACCAAAACATAAACTGCACAAAGTGAAGCAACCTTAAGCACCCTGTTATCTGGTTTTTCCACACATATAAAGTTATTTTTGGAAAAAAGAAAAGAAAAGAAAAGAAAAATTAATTAAAAATGATTTGAAAATAATTCAAAATTTAGAGTAAATAGTTTCCTAGACGGCCAATGAATGACTTTGGATAAACAGCTTTCTGGTAAATTGTATCATCACTCTATGCTTTTTTGTATTTTTAATAAAATACTTTTATCACTTTTTTGGGAACAACTTTTATCAACAAATTTGAAACTTATATTTGCCTTTACCGTATATTTCGAAGTAAACTAAAAACGACAATCCAAGTTTTCCTGGTAGTATATTGCACCCCATACGACAAAAAACGACCAAATTTTTTGCACAAAAACGAAGAATATTTCACCTCTAAAAACCAAAAGTACCATAGTGACGGAAAGACAAAAGGCAAAGTTATTAACTCTTACCACTGTTGAATACCAGCATAGCAATGATATTGATAGTCTAATGAATCAAGATGTTAAACCGAGACAGGTCAATTCTGGTGCAGACAAAATTGCAGATACTGTATACGCAAATGTTATACAGATACACTAA

mRNA sequence

ATGCCAAATACCATAGTGACGGAAAGACAAAAGGCAAAGTTATTAACTCTTACCACTGTTGAATACCAGCATAGCAATGATATTGATAGTCTAATGAATCAAGATGTTAAACCGAGACAGGTCAATTCTGGTGCAGACAAAATTGCAGATACTGTATACGCAAATGTTATACAGATACACTAA

Coding sequence (CDS)

ATGCCAAATACCATAGTGACGGAAAGACAAAAGGCAAAGTTATTAACTCTTACCACTGTTGAATACCAGCATAGCAATGATATTGATAGTCTAATGAATCAAGATGTTAAACCGAGACAGGTCAATTCTGGTGCAGACAAAATTGCAGATACTGTATACGCAAATGTTATACAGATACACTAA

Protein sequence

MPNTIVTERQKAKLLTLTTVEYQHSNDIDSLMNQDVKPRQVNSGADKIADTVYANVIQIH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G012000.1Lsi01G012000.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G012000Wild cucumber (PI 183967)cpilsiB020
Lsi01G012000Wild cucumber (PI 183967)cpilsiB169
Lsi01G012000Wild cucumber (PI 183967)cpilsiB440
Lsi01G012000Cucumber (Chinese Long) v2culsiB021
Lsi01G012000Cucumber (Chinese Long) v2culsiB170
Lsi01G012000Cucumber (Chinese Long) v2culsiB435
Lsi01G012000Melon (DHL92) v3.5.1lsimeB140
Lsi01G012000Melon (DHL92) v3.5.1lsimeB150
Lsi01G012000Watermelon (Charleston Gray)lsiwcgB118
Lsi01G012000Watermelon (Charleston Gray)lsiwcgB130
Lsi01G012000Watermelon (Charleston Gray)lsiwcgB142
Lsi01G012000Watermelon (97103) v1lsiwmB127
Lsi01G012000Watermelon (97103) v1lsiwmB152
Lsi01G012000Watermelon (97103) v1lsiwmB161
Lsi01G012000Cucumber (Gy14) v2cgyblsiB017
Lsi01G012000Cucumber (Gy14) v2cgyblsiB153
Lsi01G012000Cucumber (Gy14) v2cgyblsiB398
Lsi01G012000Melon (DHL92) v3.6.1lsimedB146
Lsi01G012000Melon (DHL92) v3.6.1lsimedB157
Lsi01G012000Silver-seed gourdcarlsiB214
Lsi01G012000Silver-seed gourdcarlsiB223
Lsi01G012000Silver-seed gourdcarlsiB556
Lsi01G012000Silver-seed gourdcarlsiB742
Lsi01G012000Cucumber (Chinese Long) v3cuclsiB021
Lsi01G012000Cucumber (Chinese Long) v3cuclsiB185
Lsi01G012000Cucumber (Chinese Long) v3cuclsiB462
Lsi01G012000Watermelon (97103) v2lsiwmbB114
Lsi01G012000Watermelon (97103) v2lsiwmbB116
Lsi01G012000Watermelon (97103) v2lsiwmbB124
Lsi01G012000Watermelon (97103) v2lsiwmbB140
Lsi01G012000Wax gourdlsiwgoB152
Lsi01G012000Wax gourdlsiwgoB172
Lsi01G012000Bottle gourd (USVL1VR-Ls)lsilsiB025
Lsi01G012000Bottle gourd (USVL1VR-Ls)lsilsiB070
Lsi01G012000Cucumber (Gy14) v1cgylsiB087
Lsi01G012000Cucumber (Gy14) v1cgylsiB398
Lsi01G012000Cucurbita maxima (Rimu)cmalsiB230
Lsi01G012000Cucurbita maxima (Rimu)cmalsiB564
Lsi01G012000Cucurbita maxima (Rimu)cmalsiB597
Lsi01G012000Cucurbita maxima (Rimu)cmalsiB747
Lsi01G012000Cucurbita maxima (Rimu)cmalsiB786
Lsi01G012000Cucurbita moschata (Rifu)cmolsiB218
Lsi01G012000Cucurbita moschata (Rifu)cmolsiB546
Lsi01G012000Cucurbita moschata (Rifu)cmolsiB582
Lsi01G012000Cucurbita moschata (Rifu)cmolsiB740
Lsi01G012000Cucurbita moschata (Rifu)cmolsiB774
Lsi01G012000Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G012000Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G012000Cucurbita pepo (Zucchini)cpelsiB491
Lsi01G012000Cucurbita pepo (Zucchini)cpelsiB701