Lsi01G011620 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G011620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Histone deacetylase, putative
Location	chr01 : 9761848 .. 9769022 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACACAAAATTGGAGGATTGAACGGGTAATTAGAAAATATATAAATATAAAAAAAGAAAATTCATCGAAAGATCAACGAATTTCAATGGGTTTCAATTAGGCCACGTTGCAGATTGCAACGTTCCGGCTCCTCCACCTGGCCGCCTCCCCTGATATTTGGCGCCGAGAGTATCGACTGTTCATTACAGTTACTGAAGTCTCTCTAATGGAATTTCGCATTCTGCAACAGTCTCCATCGTGTTATGCAGGTATCTCTCTCACTACAAACGCATATTGCTGCAGTATTTTCCTTAATGTCTTCTTTGTTCTGGATTGAGTTTGATTTCAAGTTCAAATTAGGGTTTGAATTGATTTTATCTATCTGGGTTCTTGTGTACTTTCTGTTGCCTCGTCTTGAATTGATTTTATCCGGGTGTTCTGGTGTTTTTTTTGTTTATTAACCTCTTTGATGATCGACAAACTTATGATCAGATTTCACTGAGTCTTACCCGTTTTAGTATTCGTTATATGTACACGAAGGTGGGGTTGATATCTATTAGGAAAGTTCGATATTGGCAATGGGGAGCCTTCTTTACATCTTTGTTTGATGATTGTCTTCAGCCTGTTTAGCAGCTTATTCGACTATTTGGATAAGCATTTCTGAAGAGAATTGTAAATTGAACAGGAAATGTCTTTTGCTTGGTCCAGCCCCGTTTGGGACGGAAGTTTCTTAGTTGGGCTCCCACGAACACAACGTTTTTGCAGAAGATATGTTCACGAAATGAAGCTAGGAGAAAAACACAACGTCGTTCGGAAGTTAATAGAGCGGCTGTACTCTGTTCAACTAGTTTAAATGAGAGTCCATTGGCGCACTATGATAACGTGAAAATTATTTATTCGGTAGCTGCTGCCACGGGTCATAATCAGGTACTCTGAGTCTATTAAGACCTTGTATTATCAATATGCCTCGCAAAGAAGTAATCTTATGGTGATTTTAGTTTTTATTCAATGTTCATGGTTTCTTGGGAGGTCCTTAATGCCTAGGAGGAATCACTTCTGTCTCAAATTTCATCAGACATTCTATGTCAAATAAATTTCAACTTATAATTTTTGTTCTTTGTTTGGAAAAAGCTATTAGCTCAAGCAGCTGATTTAGGCAGAAGGCTGTTGATGTCAGTTATACAATCTGGCTAAGGAATCACTCCGAGCCTTGAAATTAGGATTCTAGAGTTCTAAATTAAGAAGAAGCACAGACAGTGTCTGTTGTTTACATATTGGACACTTGTTTACACAATAAATACGTGTTAGACACCAATTATACAAAATCAATATAGGTCCTCCAACATTTGTTAGACACATATTGAACACTGGTTAATAAACAAACACATTATAATATAGGACAAAAATAATAAATTTTAAGAGCGGAATACATCAAATTCATGTTTTAGCTTATAAATGATAAATCTTATTGACTTCAAATTTCTTTGTCCTAGAAATCTGATACACATTTTAATAAACAAGTCCTTGCCATGCCCATGTTTTAGCTTTCTTAGAAATGATGTGTCATCGTGTTCCTGTTGTGTCGTATTTGCATCCGTACTTTTAGGTTGAAATGGATGGTAACATTTTTATCAGATAGCAGTCTCACAGCCATGGAAAAGTAAATTTTGGTAGCTTGATTTGATTGAAAGCATTGTATTCCGTGAAATGAAATTTCTATCTTATGTAACCTTATATTTGAACTATAACTTACTGGACCATCAAAGATCTTTCTGCTTTTGCCTAAATTTATTCTTGGACTGATCTGTTCATTAAATTTTCTGTAACAGGAATCTCATCCAGAATCTCATCTCAGGGTTCCTGCAATAGCAAATGCTCTTGAAGATATGGAACTCACACCTAAGGTAAAATATTATGCAACCATCAATAGGAAAACGTGTTACTTATATAAAAATAATATTGTAAAATCAAACCTTAATCAATTTAAAATGACATAATGATTCTGAGTGGTTTTTTTCAACGGTTGGAAGCCAGAAATTCTTAAACACTAGAAAGCAGATTCTGAAGCCAACAAATCTCACTTAATCCCATATTGTAAAACACTAGAAAGCTGACCGTTCTTCATTTCTTTTCCGTGGTGGATAGCAAAGCACATTTAAACTTGTTCAATAAATTATATTTTTGTTGTCATAAACTTCAGTTTCATTGGATAATTGTATAACAGTCTCTCTTGCTTTTTTGGTAATGTGTTTCTCTTATCCTTAGTTGTTTTCATGATCGTCTTTTTTTTTCTTCTGGGTACAATGTATTGCAGTTTCAAGGTTCAAATGTCATTGAACTTCAAAATTACAAACCTGCTTCAGTTGATGACATTGTGAGTGTTCATTCAAAATCATACGTGGCAGGCCTTGAGAAGGTATCCTCTTGGTATCTATTATTTCCAAGTCTTGGGTCATTCTATTGCAAAGTTGATGTCAACCCCTCACCCTGCCTGTACCACACAACCACTCATTATCCCTTACCAACCACCTTCCGTCTACAATATGGATAAAGTCCCTTGGAATTAAGGAAAAAGATACGGAGAAGAGAGAGAAGAAAAGGGAAGGCAAAATATATTTTGTAATCACTTTCAGAACATATCTATCTAATTTATTGATATCAATTTTGTCATTCATGTGCACACAAAACAATGGAATTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGCGTGGCTACTATATCCTGTAGATCCATTGAGATGGTAACAGGATTGAAAACAAATTATTTAAAATTTCTGGTGAGAAGTCCAACGTTTTAAGTGAGCATGGAAACTGCAAGTTTTTCTCTGTCCCTTAGGCATTTTTTCCTGTCGAATTGTTGTGCCCCATTTTTGGTGCATAATGCATTGCTTTTCCCCTTCTTGGATCGAGAACACTTTTATATATATATATATATATAATTTTGATTTTTTTTAAAAAAAACCTGTTTGTATTAAAAAAAAAAAAGGAAAAGAATCAGCCTTAGGCTGGGAAAAGAAGGAACCTCACCTACAAGAACTAAAGAACTTTCCAATCGTTCACAATCATGAATAGGCTGTAGTTACAGAAAAATTTCCTGTGATTAAGACACCAAAGGAAGAGATACACTATACACTATCCAATTTTGCTAAAAGAAAGTGAATCTGAGTTATATCTTAAAAAAAAAAAAAAAAAACTTTCCATTGACGTAATGAAAATACTAATGCTCAAAAGATGCGAACTCCACAAGAGAGTGAATTAGAAAGCAGTAAGACACTGAAATAGAGAGATTACAATGGAAGAACAAAACCATTCCAATTAAGACACAAATCTTGAATAGAATATCCAGCAGCACGCCAAGAAGCCTTGAGACGAGCTGAAGCAAACTGATCTGACCATGGGAGATGCTTAATGTAGCAACATTTCCAAAGTCTTATTGTAATCGAATTTTTTTCCTGCATATTTACAGGCTATGGATAGGGCTTCTCAAGATGGACTTATTTTAATTGAAGGCTCTGGACCGACATATGCAACTGCCACTGTGAGTTTGTCTGCTGCCTCTTTTTTTGCTTCTTTGTCTATATTTCACGTACTATTATTTACTCGTCTTCTAATTAGGTCTTACCAGATAGATCCTTTGGAGGGGTTCTTGGGTAAGTCTTTCTTTCGTAATTTGATCGATCCTTCTCCCCTAGGCATGTCTGTTTTTTTTCGGTGCTTTGGAGGATTAAGAGTCCTAGGAAAGTGAGGTTCTTTCCTTGGCAAGTCTTACATGGCCGTGCTAACACGATAGATCGACTTAAGAGGAAGCTGCCCTCACTTGTGGGTCTTGTTGCATTCTTCGCCGGAAGGCGAAAGAAGACATGGACCATATTCTTTGGTGTTGTGAGTTTGCTAGCTTGGTTTGGGATTCTTTGTTTTAGACTTTTGGCATTATGCTTGCGAGGCACAGAGATGTTGGAGCGTTGCTTGAGGAGCCCCTTCTTAACCTGCCCTGTGGGGAGAAGAGTTGCTTTCTCTGGCTTGCGACGGTGTGTGCTATCTTGTGGGTGGTGTGGGGTGAGCGGAACAATAGAGTTTTTAAAGGTGTGGAGAGGGTCCGTAGCGAGATTTGGTCCCATGTTCTTTATATGTTTCTTTGTGGACTTCGATTTTGAAGGCTTATTGTAACTATTCTATAGGTGTTATTTTGCATAGTTGGAGTCCCTTTCTTTAGAGGGTGCTCCCCCTTTTTTGTGAGCTAGAATTTTTGGATGCCCTTGTATTCTTTCATTTTTTGTCGATGAAAGTGGTTATTTTCATAAAGAGAAAAAAGGTCTTACCAGATAGAAAGTTAGGACCCTCCACTCAACCGTTCTTCCAAAAGCCTATCCCTTCCATCATGAACTCTAAACTAAATTATGATCTACGAAGTCAGTGACTCAGGACCCTTAAGTCCGCGAACATAGCTACTAAAGTCCTGAAATCATGGCTAAATCTTATACATAAAACTTAAAAATACCGAAGACTGTAGTTGCTTCCATGATTTCAGGACTTTAGTAGCTAAAATTAAAAAAAAAAAAAACCTAAACCATATAAACCATTTCCACTCTCCCTCCCTCTGCAGCCGGTTGGAATGGAATATGTCAATCATTTCCAACCTGCAGTTATGAGATCAGAATTTTGTTTTTAGAGATATGTTTTTAGCAAAATGTATTCAGATTCCTGTGAATGTGGACAAAGAAAACCTCTATTGCCTACTGATCCAACCTTACATTCATTGCCTTGCTTGTTCTAGTTCTCTTTAATGGTGTCACCCATTGCCATAGTTACTCAGCTGTTCTGAGTTGTTACTTTTGGTAGCTGTGTAGGATCCGCCATTTGTAAATACAATCTCCTGTCATTTGTATGACTCTTTTATCTTCTCTTGATATGCAAAGCTGTTATACTTAGCAGGGAGTGTTAGCAAGGCAAACAAATTCCCACATTAGCTTGGGAAGGCCCCACATTGGCTAAGCATCCTCAACCCAATACAAATCAAAGATCAACGTGAAAGAGAAAATTCCCAATACAAACTAAAGACTTGAAAACAAAAATACAAAAAAGACTTAGAAAGATAACACTAACACCAAACATCCTTTCAAACCCAAAATCCGGCTGGTAATACTTTGACAGCAAAAATCCACAAAGTATTACTAGTCGGATTTTTTGGGTGAAACAAAAAATGAAGCCAGGAGGAACTATGTGCAAAGTGGATAATATCGAACAAATGTCATTGCTCAAAAAATGAATCCTTTCACCCACAAAACCTACTACTTATTCCTAACCATAGCAATTTGATCTCTGATTTCACACACATGTGTCACACTCACGCATGCCACATATGCAAGTGTCTTATATGTAATGTAACATATCACATGATAATTTAGCATTAATGTTTTTATTTGGAGCAATACCATTAGCGTGATGACATTTTGATTCTGTTGGCAATGCAGACATTTAATGAATCACTAGTTGCAGCTGGAGCAGGACTTTCTTTACTTGATTCAGTGGTGATGTCTCAACCCAGCGCGATAGTCACTTCTTAATGATAATTTTTGTATGTTATCCCTTATATTTAGGCAAACTGCCAATCTGTAAAGAGAAATTCCACGCTTTCTACTTTCAAGTGTTGAGACATTAGATTTTAATTCCTTGTCCAAATCCTTTGCACACGCATAAGTATTTAAAGTTTCATATTCCTGTGTACTTGGTTTCAGGTTAAAGCATCAAAAACCTACAAGAATCCGCCAATTGGTTTTGCATTGATAAGACCTCCAGGACATCATGCATTCCCCAAGGGACCGATGGGATTCTGTGTTTTTGGGAACGTAGCTATTGCAGCTCGTTATGCCCAACGTGTGCATGGATTGAAGCGTGTCTTTATTATAGATTTTGATGCTCACCATGGGAATGGAACAAGTGATGCATTCTATGACGATTCAGATATATTCTTCCTTTCAACTCACCAAGTTAGCATTCTTTAAGAACAATGTGCTATATATTTGATTCTTTGATGTGGTTATCAGAAACACGCATGAACTACTCAGACATGAGAAATTAACTGTAAAACTGTGATGCACGACTGTTGGTAACTGTAAAACTTGGGGTTTCCTGGACTTTGCACATGTTCTTTTACTTGGCATTAACTCTCATTGGTAATTTAATCCCTTCTGGTTCAGGATGGAAGTTACCCTGGAACTGGTAAAATCGATGAAGTGGGTCGTGGAGACGGGGAAGGAACAACTCTGAATATTCCTCTACCGGGAGGCTCAGGTGATTATGCCATGAAAATGGTGTTTGACGAAGTAATTGTACCCTGTGCTCAAAGATTTAAGCCTGATATCATTCTCGTCTCTGCTGGGTCAGTTCCCAACCTCTAGAAAATTTTAATAAGCATGAAGCATCAATCAACTTTTTTGTGTAATGACATTTGCTTAATGTATTTCTTAATCATGCACGTTTAAGCATATGTTCTATTCATTATGTTCGAGTGTATTAATATGTTGATTTTCAAAGTCATATTAATTAATTATGTTCTAGTATGAATATCTTGGAACTTAATTCTGTAGGTACGATGCTCATGTATTAGATCCATTAGCCAATCTGCAATTCACGACCGGAACATACTACATGCTTGCATCCAATATTAAACAACTGGCAAAGGAATTATGCGAGGGTCGATGTGTTTTTTTCCTGGAAGGAGGTTACAACCTCGAGTCTCTTTCATATTCAGTGGCTGATTCGTTCCGTGCATTTCTTGATGAGCCGAGCTTGGCGTCAGGGTTCGATAATCCTGCAATCTTGTATGAAGAACCATCAAGGAAGTTTAAGCAAGTGATCCATAAAGTGAAACAAATACATTTACTTTAAGGTTATTATAAACTTCTTTGAGTAATTTATTCTAGATATCTTTCTTTCATCCTTATTATTCTGTGTACTCAGGTAGACCTGCATTGTAACTTGATGTATATTATTTGATGAACATATCTTCAGAGAAAGGAAATATAAAGCGATGATATCTTGTTGTACATAATGATTTATTCCCCTATTTGTCAAACATCAACAAGTATAATCTGATGCTCTGTTTTTTGTTTGTTTGTTTCCTATCTCTTAAGAGGCAGGAGAATCTTGTAAACATGTAAAGGAGTG

mRNA sequence

CGAACACAAAATTGGAGGATTGAACGGGTAATTAGAAAATATATAAATATAAAAAAAGAAAATTCATCGAAAGATCAACGAATTTCAATGGGTTTCAATTAGGCCACGTTGCAGATTGCAACGTTCCGGCTCCTCCACCTGGCCGCCTCCCCTGATATTTGGCGCCGAGAGTATCGACTGTTCATTACAGTTACTGAAGTCTCTCTAATGGAATTTCGCATTCTGCAACAGTCTCCATCGTGTTATGCAGGAAATGTCTTTTGCTTGGTCCAGCCCCGTTTGGGACGGAAGTTTCTTAGTTGGGCTCCCACGAACACAACGTTTTTGCAGAAGATATGTTCACGAAATGAAGCTAGGAGAAAAACACAACGTCGTTCGGAAGTTAATAGAGCGGCTGTACTCTGTTCAACTAGTTTAAATGAGAGTCCATTGGCGCACTATGATAACGTGAAAATTATTTATTCGGTAGCTGCTGCCACGGGTCATAATCAGGAATCTCATCCAGAATCTCATCTCAGGGTTCCTGCAATAGCAAATGCTCTTGAAGATATGGAACTCACACCTAAGTTTCAAGGTTCAAATGTCATTGAACTTCAAAATTACAAACCTGCTTCAGTTGATGACATTGTGAGTGTTCATTCAAAATCATACGTGGCAGGCCTTGAGAAGGCTATGGATAGGGCTTCTCAAGATGGACTTATTTTAATTGAAGGCTCTGGACCGACATATGCAACTGCCACTACATTTAATGAATCACTAGTTGCAGCTGGAGCAGGACTTTCTTTACTTGATTCAGTGGTTAAAGCATCAAAAACCTACAAGAATCCGCCAATTGGTTTTGCATTGATAAGACCTCCAGGACATCATGCATTCCCCAAGGGACCGATGGGATTCTGTGTTTTTGGGAACGTAGCTATTGCAGCTCGTTATGCCCAACGTGTGCATGGATTGAAGCGTGTCTTTATTATAGATTTTGATGCTCACCATGGGAATGGAACAAGTGATGCATTCTATGACGATTCAGATATATTCTTCCTTTCAACTCACCAAGATGGAAGTTACCCTGGAACTGGTAAAATCGATGAAGTGGGTCGTGGAGACGGGGAAGGAACAACTCTGAATATTCCTCTACCGGGAGGCTCAGGTGATTATGCCATGAAAATGGTGTTTGACGAAGTAATTGTACCCTGTGCTCAAAGATTTAAGCCTGATATCATTCTCGTCTCTGCTGGGTACGATGCTCATGTATTAGATCCATTAGCCAATCTGCAATTCACGACCGGAACATACTACATGCTTGCATCCAATATTAAACAACTGGCAAAGGAATTATGCGAGGGTCGATGTGTTTTTTTCCTGGAAGGAGGTTACAACCTCGAGTCTCTTTCATATTCAGTGGCTGATTCGTTCCGTGCATTTCTTGATGAGCCGAGCTTGGCGTCAGGGTTCGATAATCCTGCAATCTTGTATGAAGAACCATCAAGGAAGTTTAAGCAAGTGATCCATAAAGTGAAACAAATACATTTACTTTAAGGTTATTATAAACTTCTTTGAGTAATTTATTCTAGATATCTTTCTTTCATCCTTATTATTCTGTGTACTCAGGTAGACCTGCATTGTAACTTGATGTATATTATTTGATGAACATATCTTCAGAGAAAGGAAATATAAAGCGATGATATCTTGTTGTACATAATGATTTATTCCCCTATTTGTCAAACATCAACAAGTATAATCTGATGCTCTGTTTTTTGTTTGTTTGTTTCCTATCTCTTAAGAGGCAGGAGAATCTTGTAAACATGTAAAGGAGTG

Coding sequence (CDS)

ATGGAATTTCGCATTCTGCAACAGTCTCCATCGTGTTATGCAGGAAATGTCTTTTGCTTGGTCCAGCCCCGTTTGGGACGGAAGTTTCTTAGTTGGGCTCCCACGAACACAACGTTTTTGCAGAAGATATGTTCACGAAATGAAGCTAGGAGAAAAACACAACGTCGTTCGGAAGTTAATAGAGCGGCTGTACTCTGTTCAACTAGTTTAAATGAGAGTCCATTGGCGCACTATGATAACGTGAAAATTATTTATTCGGTAGCTGCTGCCACGGGTCATAATCAGGAATCTCATCCAGAATCTCATCTCAGGGTTCCTGCAATAGCAAATGCTCTTGAAGATATGGAACTCACACCTAAGTTTCAAGGTTCAAATGTCATTGAACTTCAAAATTACAAACCTGCTTCAGTTGATGACATTGTGAGTGTTCATTCAAAATCATACGTGGCAGGCCTTGAGAAGGCTATGGATAGGGCTTCTCAAGATGGACTTATTTTAATTGAAGGCTCTGGACCGACATATGCAACTGCCACTACATTTAATGAATCACTAGTTGCAGCTGGAGCAGGACTTTCTTTACTTGATTCAGTGGTTAAAGCATCAAAAACCTACAAGAATCCGCCAATTGGTTTTGCATTGATAAGACCTCCAGGACATCATGCATTCCCCAAGGGACCGATGGGATTCTGTGTTTTTGGGAACGTAGCTATTGCAGCTCGTTATGCCCAACGTGTGCATGGATTGAAGCGTGTCTTTATTATAGATTTTGATGCTCACCATGGGAATGGAACAAGTGATGCATTCTATGACGATTCAGATATATTCTTCCTTTCAACTCACCAAGATGGAAGTTACCCTGGAACTGGTAAAATCGATGAAGTGGGTCGTGGAGACGGGGAAGGAACAACTCTGAATATTCCTCTACCGGGAGGCTCAGGTGATTATGCCATGAAAATGGTGTTTGACGAAGTAATTGTACCCTGTGCTCAAAGATTTAAGCCTGATATCATTCTCGTCTCTGCTGGGTACGATGCTCATGTATTAGATCCATTAGCCAATCTGCAATTCACGACCGGAACATACTACATGCTTGCATCCAATATTAAACAACTGGCAAAGGAATTATGCGAGGGTCGATGTGTTTTTTTCCTGGAAGGAGGTTACAACCTCGAGTCTCTTTCATATTCAGTGGCTGATTCGTTCCGTGCATTTCTTGATGAGCCGAGCTTGGCGTCAGGGTTCGATAATCCTGCAATCTTGTATGAAGAACCATCAAGGAAGTTTAAGCAAGTGATCCATAAAGTGAAACAAATACATTTACTTTAA

Protein sequence

MEFRILQQSPSCYAGNVFCLVQPRLGRKFLSWAPTNTTFLQKICSRNEARRKTQRRSEVNRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGRGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDNPAILYEEPSRKFKQVIHKVKQIHLL

Homology

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BLAST of Lsi01G011620 vs. Swiss-Prot
Match: HDA14_ARATH (Histone deacetylase 14 OS=Arabidopsis thaliana GN=HDA14 PE=2 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 6.6e-163
Identity = 283/405 (69.88%), Postives = 332/405 (81.98%), Query Frame = 1


Query: 41  QKICSRNEARRKTQRRSEVNRAAVLCSTSLNESPLA----HYDNVKIIYSVAAATGHNQE 100
           + IC +N+ R+   + S    +++ CS S  ++PL        + ++IYSV+AA GHN+E
Sbjct: 22  RNICKKNQWRKYLLKPSG---SSINCSFSTEKNPLLPSIQQLADARLIYSVSAALGHNKE 81

Query: 101 SHPESHLRVPAIANALEDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAM 160
           SHPE   RVPAI NALE  ELTPKF+GS ++EL N+K A+V+DI +VH K+YV GLEKAM
Sbjct: 82  SHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAM 141

Query: 161 DRASQDGLILIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRP 220
           D AS  GLI IEGSGPTYAT+TTF +SL+AAGAG++L+DSV+ AS+   +PPIGFALIRP
Sbjct: 142 DEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRP 201

Query: 221 PGHHAFPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFF 280
           PGHHA PKGPMGFCVFGNVAIAAR+AQR HGLKR+FIIDFD HHGNGT+DAF +D DIFF
Sbjct: 202 PGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFF 261

Query: 281 LSTHQDGSYPGTGKIDEVGRGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDI 340
           LSTHQDGSYPGTGKI ++G+G GEGTTLN+PLPGGSGD AM+ VF+E+IVPCAQRFKPDI
Sbjct: 262 LSTHQDGSYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDI 321

Query: 341 ILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYS 400
           ILVSAGYDAHVLDPLANLQFTT TYY LA +IK+LAKE+C GRCVFFLEGGYNLESLS S
Sbjct: 322 ILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNLESLSSS 381

Query: 401 VADSFRAFLDEPSLASGFDNPAILYEEPSRKFKQVIHKVKQIHLL 442
           VADSFRA L E SLAS FDNPA LY+EP RK +  I + K IH L
Sbjct: 382 VADSFRALLGEDSLASEFDNPAYLYDEPMRKVRDAIQRAKSIHCL 423

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BLAST of Lsi01G011620 vs. Swiss-Prot
Match: Y130_ARCFU (Uncharacterized protein AF_0130 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0130 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.3e-53
Identity = 133/364 (36.54%), Postives = 195/364 (53.57%), Query Frame = 1


Query: 93  HNQE-SHPESHLRVPAIANALEDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAG 152
           H Q  +HPE   R   +A  ++ +     F+   ++ L+ +K AS++D++ VH++ YV  
Sbjct: 14  HEQSPTHPERRER---LAYTMDQLREEGIFESERIVLLEPFK-ASLEDVLEVHTEEYVRF 73

Query: 153 LEKAMDRASQDGLILIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGF 212
           LE     + + G+I  + + P       F+ +L+AAG  +    +V+  +K  +N    F
Sbjct: 74  LEM---ESKKGGIIDFDTNIPV----GVFDRALLAAGGAIRAAQAVL--NKECEN---AF 133

Query: 213 ALIRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDD 272
           A+IRPPGHHA P    GFC   N+AI  ++  +  G +R+ I+D+DAHHG+GT + FY+D
Sbjct: 134 AMIRPPGHHAKPYIGAGFCYLNNMAIMVKWLLK-QGFERIAILDWDAHHGDGTQEIFYND 193

Query: 273 SDIFFLSTHQDGSYPGTGKIDEVGRGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQR 332
             + F+STHQ   YPGTG  +E G G GEG T+NIPLP G+GD    MV DE+I P    
Sbjct: 194 DRVLFISTHQMPLYPGTGYPEECGTGKGEGYTVNIPLPPGTGDEGYMMVIDEIIEPVVNE 253

Query: 333 FKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLE 392
           FKP  I +SAG D H  DP+ +L  T   Y  +      +A++ C+GR V  LEGGY++E
Sbjct: 254 FKPQFIAISAGQDNHFTDPITSLALTARGYAEMMRRAVAMAEKHCDGRLVAVLEGGYSVE 313

Query: 393 -SLSYSVADSFRAFLDEPSLASGFDNPAILYEEPSR---------------KFKQVIHKV 440
            +L Y+      A        +GFD  AI   EP                 K K  I  V
Sbjct: 314 GALPYTNLGIIAAM-------AGFDLSAI--REPENYLPELLWRKRDSALVKLKHNIEDV 351

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BLAST of Lsi01G011620 vs. Swiss-Prot
Match: Y1194_METTH (Uncharacterized protein MTH_1194 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_1194 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.8e-50
Identity = 117/306 (38.24%), Postives = 166/306 (54.25%), Query Frame = 1


Query: 93  HNQESHPESHLRVPAIANALEDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGL 152
           HN E H E+  R  AI  A+E  +L+P+F    +        A +DDI+ VHS ++V  L
Sbjct: 12  HNHEGHVENSGRTRAILRAIESSDLSPRFVEPGM--------AGIDDILMVHSSTHVEYL 71

Query: 153 EKAMDRASQDGLILIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFA 212
           E    R    G +  +    TY T  +F+ + ++AG  +   +  ++   +Y       +
Sbjct: 72  EVFAGRGG--GWLDYD----TYMTPESFSVARLSAGGAMLAAEEALRDGWSY-------S 131

Query: 213 LIRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDS 272
           L RPPGHHA     MGFC+F N+AIA  +A+R  G+ R  ++DFD HHGNGTS  FY D 
Sbjct: 132 LGRPPGHHATYDRSMGFCIFNNIAIAIEHARRNLGVSRPLVLDFDVHHGNGTSSIFYRDR 191

Query: 273 DIFFLSTHQDGS--YPGTGKIDEVGRGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQ 332
           D+ ++S HQD    +PGTG IDE G G+GEG  LNIP+P GSG+     +   ++    +
Sbjct: 192 DVMYISIHQDPRTLFPGTGFIDETGSGEGEGFNLNIPMPRGSGNREYLWILGMILPAVLE 251

Query: 333 RFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNL 392
            F+PD+I VSAG+DAH  DPLA +      +  +   I Q         C   LEGGY+ 
Sbjct: 252 GFRPDMIFVSAGFDAHRRDPLAEIMVDEEFFSWIGWFIHQTGLP-----CTAVLEGGYDP 291

Query: 393 ESLSYS 397
           E+L  S
Sbjct: 312 EALGRS 291

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BLAST of Lsi01G011620 vs. Swiss-Prot
Match: HDA6_CAEEL (Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=3 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 3.5e-47
Identity = 128/394 (32.49%), Postives = 191/394 (48.48%), Query Frame = 1


Query: 16  NVFCLVQPRLGRKFLSWAPTNTTFLQKICSRNEARRKTQRRSEVNRAAV--LCSTSLNES 75
           N F     R   +   W   NT  +            T RR++        L ST    S
Sbjct: 365 NCFDYFPSRTSLRLAQWPIVNTKVIYNY-------DPTTRRADTGEIIQDELASTEFTAS 424

Query: 76  PLAHYDNVK-IIYSVAAATGH---NQESHPESHLRVPAIANALEDMELTPKFQGSNVIEL 135
            +   +N++ +IY       H    +++HPE   R   I   L +  +  K    N   +
Sbjct: 425 DVIPTENMETLIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERI 484

Query: 136 QNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGS-GPTYATATTFNESLVAAG 195
                A+ ++I  VH+K  +  L        ++ +   E      Y T  T   +  A G
Sbjct: 485 -----ATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVG 544

Query: 196 AGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVHGL 255
           A L  +D + +     +N      ++RPPGHHA      GFC+F NVA+AA+YAQR H  
Sbjct: 545 AVLQSVDEIFEKDAGQRN---ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKA 604

Query: 256 KRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQ--DGSYPGTGK---IDEVGRGDGEGTT 315
           KRV I+D+D HHGNGT + FY+DS++ ++S H+   G++   G+     +VG G GEG +
Sbjct: 605 KRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMS 664

Query: 316 LNIPLPG-GSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYY 375
           +N+P  G   GD   +M F  VI+P A +F PD++L+SAG+DA V DPL   + T  T+ 
Sbjct: 665 VNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFA 724

Query: 376 MLASNIKQLAKELCEGRCVFFLEGGYNLESLSYS 397
           ++   +  LA     GR +  LEGGYNL S+S S
Sbjct: 725 LMTYQLSSLA----GGRIITVLEGGYNLTSISNS 739

[Close]

BLAST of Lsi01G011620 vs. Swiss-Prot
Match: HDA15_ARATH (Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 2.4e-43
Identity = 120/345 (34.78%), Postives = 172/345 (49.86%), Query Frame = 1


Query: 67  STSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTPKFQGSNV 126
           S+S   S    +D   +++S         + HPE   R+ AIA +L    + P       
Sbjct: 143 SSSATSSTAVGFDERMLLHSEFEVKA---QPHPERPDRLRAIAASLATAGVFP----GRC 202

Query: 127 IELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATTFNESLVA 186
           + + N +  +  ++  VH+  +V     A+D  SQ  L+    +  TYA   +   + +A
Sbjct: 203 LPI-NAREITKQELQMVHTSEHV----DAVDTTSQ--LLYSYFTSDTYANEYSARAARLA 262

Query: 187 AGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVH 246
           AG    L   +       KN   GFAL+RPPGHHA  +  MGFC+  N A+AA  AQ   
Sbjct: 263 AGLCADLATDIFTGR--VKN---GFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAA- 322

Query: 247 GLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQ---DGSYPGTGKIDEVGRGDGEGTT 306
           G K+V I+D+D HHGNGT + F  +  + ++S H+      YPGTG  DEVG   GEG  
Sbjct: 323 GAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYC 382

Query: 307 LNIPLP-GGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYY 366
           +N+P   GG GD      F  V++P A  F PD +++SAG+DA   DPL     T   Y 
Sbjct: 383 VNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGY- 442

Query: 367 MLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDE 408
              S + Q+  +LC G+ +  LEGGYNL S+S S     +  L E
Sbjct: 443 ---SRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGE 463

[Close]

BLAST of Lsi01G011620 vs. TrEMBL
Match: A0A0A0KHP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483260 PE=4 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 2.0e-230
Identity = 401/442 (90.72%), Postives = 419/442 (94.80%), Query Frame = 1


Query: 1   MEFRILQQSPSCYAGNVFCLVQPRLG-RKFLSWAPTNTTFLQKICSRNEARRKTQRRSEV 60
           MEFRILQQSPS YAG+  CLV PRLG RKF  W+  NTTFLQK+  R E RR+ Q RSEV
Sbjct: 1   MEFRILQQSPSRYAGSFLCLVNPRLGIRKFFGWSSANTTFLQKMSLRIEPRRQPQYRSEV 60

Query: 61  NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTP 120
           NR AVLCSTSLN+SPLA+YDNVKI+YS+AAATGHN+ESHPESHLRVPAIANALEDMELTP
Sbjct: 61  NRGAVLCSTSLNDSPLANYDNVKIVYSIAAATGHNKESHPESHLRVPAIANALEDMELTP 120

Query: 121 KFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATT 180
           KF GSNVI+L+NYKPASVDDIVSVHSKSYVAGLEKAMDRAS+DGLILIEGSGPTYATATT
Sbjct: 121 KFLGSNVIQLENYKPASVDDIVSVHSKSYVAGLEKAMDRASRDGLILIEGSGPTYATATT 180

Query: 181 FNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAA 240
           FNESLVAAGAG+SL+DSVVKAS+T+KNPPIGFALIRPPGHHA PKGPMGFCVFGNVAIAA
Sbjct: 181 FNESLVAAGAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAA 240

Query: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGRGDG 300
           RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVG GDG
Sbjct: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGCGDG 300

Query: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360
           EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG
Sbjct: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360

Query: 361 TYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDNPAI 420
           TYYMLASNIKQLAKELC GRC+FFLEGGYNLESLSYSVADSFRAFLDEPS+AS FDNPAI
Sbjct: 361 TYYMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVADSFRAFLDEPSMASEFDNPAI 420

Query: 421 LYEEPSRKFKQVIHKVKQIHLL 442
           LYEEPSRKFKQVI KVKQIH L
Sbjct: 421 LYEEPSRKFKQVIQKVKQIHSL 442

[Close]

BLAST of Lsi01G011620 vs. TrEMBL
Match: V4T773_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001184mg PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.6e-174
Identity = 314/445 (70.56%), Postives = 360/445 (80.90%), Query Frame = 1


Query: 1   MEFRILQQSPSCYAGNVFCLVQPRLGRKFLSWAPTNT-TFLQKICSRNEARRKT--QRRS 60
           ME ++L+  P  + GN+F L+   + +    W   N   F  K+       + +  QR++
Sbjct: 1   MELQMLK--PPTFPGNLFSLMSHHVRQ----WKSHNQFNFDTKLLGHRHIWKYSSLQRKN 60

Query: 61  EV-NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDME 120
            + N+   +CS +  +       + ++IY VA A GHNQE HPESHLRVPAI +ALE ME
Sbjct: 61  LIKNKRGFICSYTAEKDLNLQLSDARVIYGVAPALGHNQELHPESHLRVPAIVSALEKME 120

Query: 121 LTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYAT 180
           LT +F+GS +IEL+N+ PASVDDI SVH+++YV+GLEKAMDRASQ G+ILIEGSGPTYAT
Sbjct: 121 LTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT 180

Query: 181 ATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVA 240
           ATTF ESL AAGAG++L+DSVV ASK   +PP+GFALIRPPGHHA PKGPMGFCVFGNVA
Sbjct: 181 ATTFQESLAAAGAGIALVDSVVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 240

Query: 241 IAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGR 300
           IAARYAQR HGLKRVFIIDFD HHGNGT+DAFYDD DIFFLSTHQDGSYPGTGKIDEVGR
Sbjct: 241 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 300

Query: 301 GDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQF 360
           GDGEG+TLN+PLPGGSGD AM+ VF EVIVPCAQRFKPD+ILVSAGYDAHVLDPLA+LQF
Sbjct: 301 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 360

Query: 361 TTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDN 420
           TTGTYYMLA+NIKQLAK+LC  RCVFFLEGGYNL SLSYSVADSFRAFL EPS AS FDN
Sbjct: 361 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 420

Query: 421 PAILYEEPSRKFKQVIHKVKQIHLL 442
           PAILYEEPS K KQ I +VK IH L
Sbjct: 421 PAILYEEPSAKVKQAIERVKHIHSL 439

[Close]

BLAST of Lsi01G011620 vs. TrEMBL
Match: V4T1Y8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001184mg PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 2.9e-173
Identity = 302/389 (77.63%), Postives = 337/389 (86.63%), Query Frame = 1


Query: 54  QRRSEV-NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANAL 113
           QR++ + N+   +CS +  +       + ++IY VA A GHNQE HPESHLRVPAI +AL
Sbjct: 33  QRKNLIKNKRGFICSYTAEKDLNLQLSDARVIYGVAPALGHNQELHPESHLRVPAIVSAL 92

Query: 114 EDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGP 173
           E MELT +F+GS +IEL+N+ PASVDDI SVH+++YV+GLEKAMDRASQ G+ILIEGSGP
Sbjct: 93  EKMELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP 152

Query: 174 TYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVF 233
           TYATATTF ESL AAGAG++L+DSVV ASK   +PP+GFALIRPPGHHA PKGPMGFCVF
Sbjct: 153 TYATATTFQESLAAAGAGIALVDSVVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 212

Query: 234 GNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKID 293
           GNVAIAARYAQR HGLKRVFIIDFD HHGNGT+DAFYDD DIFFLSTHQDGSYPGTGKID
Sbjct: 213 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKID 272

Query: 294 EVGRGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLA 353
           EVGRGDGEG+TLN+PLPGGSGD AM+ VF EVIVPCAQRFKPD+ILVSAGYDAHVLDPLA
Sbjct: 273 EVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 332

Query: 354 NLQFTTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLAS 413
           +LQFTTGTYYMLA+NIKQLAK+LC  RCVFFLEGGYNL SLSYSVADSFRAFL EPS AS
Sbjct: 333 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 392

Query: 414 GFDNPAILYEEPSRKFKQVIHKVKQIHLL 442
            FDNPAILYEEPS K KQ I +VK IH L
Sbjct: 393 EFDNPAILYEEPSAKVKQAIERVKHIHSL 421

[Close]

BLAST of Lsi01G011620 vs. TrEMBL
Match: W9QLS5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020688 PE=4 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 8.4e-173
Identity = 309/441 (70.07%), Postives = 354/441 (80.27%), Query Frame = 1


Query: 15  GNVFCLVQPRLGRKFLSWAPTNTTF------LQKICSRNEARRKTQRRSEVNRAAVLCST 74
           GN   LV+ RL      W   +T F      L+  C     R  +   S+    ++ CS 
Sbjct: 16  GNALLLVRRRL----CGWKKIHTRFGLVVGPLRSTCYHKNLRNGSGCFSKRRDISISCSA 75

Query: 75  SL--------NESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTPK 134
            +        NE P     + ++IY+VA A GHNQESHPESHLRVP+I NALE MELTPK
Sbjct: 76  GVDKDSYVPSNEKPT----DSRVIYAVAPAMGHNQESHPESHLRVPSIVNALEKMELTPK 135

Query: 135 FQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATTF 194
           F+GS ++EL+ +KPAS+DDI SVH+++YV GLEKAMDRAS+ G+I IEGSGPTYATA TF
Sbjct: 136 FRGSAIMELREFKPASIDDIASVHTRNYVTGLEKAMDRASEQGIIFIEGSGPTYATANTF 195

Query: 195 NESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAAR 254
            +SL+AAGAG+SL+DSVV+ASK  +N PIGFALIRPPGHHA PKGPMGFCVFGNVAIAAR
Sbjct: 196 EDSLIAAGAGISLVDSVVEASKLSQNQPIGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 255

Query: 255 YAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGRGDGE 314
           YAQRVHGLKR+FIIDFD HHGNGT+DAFY+D DIFFLSTHQDGSYPGTGKID++G+GDGE
Sbjct: 256 YAQRVHGLKRIFIIDFDVHHGNGTNDAFYEDPDIFFLSTHQDGSYPGTGKIDQIGQGDGE 315

Query: 315 GTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGT 374
           GTTLN+PLPGGSGD AM+ VFDEVIVPCAQ FKPDIILVSAGYDAHVLDPLA+LQFTTGT
Sbjct: 316 GTTLNLPLPGGSGDIAMRTVFDEVIVPCAQSFKPDIILVSAGYDAHVLDPLASLQFTTGT 375

Query: 375 YYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDNPAIL 434
           YYMLASNI+QLAK+LC GRCVFFLEGGYNL+SLS+SV DSFRAFL EPSLA  FDNPAIL
Sbjct: 376 YYMLASNIQQLAKDLCGGRCVFFLEGGYNLDSLSHSVVDSFRAFLGEPSLALEFDNPAIL 435

Query: 435 YEEPSRKFKQVIHKVKQIHLL 442
           YEEP  K K+ I KVK +H L
Sbjct: 436 YEEPLTKVKRAIEKVKHLHTL 448

[Close]

BLAST of Lsi01G011620 vs. TrEMBL
Match: B9RRD2_RICCO (Histone deacetylase, putative OS=Ricinus communis GN=RCOM_1187430 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 1.9e-172
Identity = 300/385 (77.92%), Postives = 334/385 (86.75%), Query Frame = 1


Query: 61  RAAVLCSTSLNESP----LAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDME 120
           RA + CS S  + P    +    + +IIYSVA A GHNQESHPESHLRVPAI  ALE ME
Sbjct: 41  RACICCSNSFEKDPNLPSIQQLTDARIIYSVAPAMGHNQESHPESHLRVPAIVTALEKME 100

Query: 121 LTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYAT 180
           L+ KF+G  +IELQ++KPAS  DI SVH+K+YVAGLEKAMD+ASQ+G+I I+G+GPTYAT
Sbjct: 101 LSAKFRGPEIIELQHFKPASAIDIASVHAKAYVAGLEKAMDQASQEGIIFIDGTGPTYAT 160

Query: 181 ATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVA 240
           ATTF ESL+AAGAGL+L+DSVV AS   +NPP GFALIRPPGHHA PKGPMGFCVFGNVA
Sbjct: 161 ATTFQESLMAAGAGLALVDSVVAASNNSQNPPTGFALIRPPGHHAIPKGPMGFCVFGNVA 220

Query: 241 IAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGR 300
           IAAR+AQRVHGLKRVFIIDFD HHGNGT+DAFYDD DIFFLSTHQDGSYPGTGKIDEVG+
Sbjct: 221 IAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGQ 280

Query: 301 GDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQF 360
           GDGEGTTLN+PLPGGSGD AM+ VFDEVIVPCAQRFKPDIILVSAGYD HVLDPLA+LQF
Sbjct: 281 GDGEGTTLNLPLPGGSGDVAMRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQF 340

Query: 361 TTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDN 420
           TTGT+YMLASNI QLAK++C GRC+FFLEGGYNL+SLSYSVADSFRAFL E SLAS FDN
Sbjct: 341 TTGTFYMLASNITQLAKDMCGGRCIFFLEGGYNLDSLSYSVADSFRAFLGETSLASEFDN 400

Query: 421 PAILYEEPSRKFKQVIHKVKQIHLL 442
           PAILYEEP  + KQ I KV+ IH L
Sbjct: 401 PAILYEEPLTRVKQAIQKVRHIHSL 425

[Close]

BLAST of Lsi01G011620 vs. TAIR10
Match: AT4G33470.1 (AT4G33470.1 histone deacetylase 14)

HSP 1 Score: 575.1 bits (1481), Expect = 3.7e-164
Identity = 283/405 (69.88%), Postives = 332/405 (81.98%), Query Frame = 1


Query: 41  QKICSRNEARRKTQRRSEVNRAAVLCSTSLNESPLA----HYDNVKIIYSVAAATGHNQE 100
           + IC +N+ R+   + S    +++ CS S  ++PL        + ++IYSV+AA GHN+E
Sbjct: 22  RNICKKNQWRKYLLKPSG---SSINCSFSTEKNPLLPSIQQLADARLIYSVSAALGHNKE 81

Query: 101 SHPESHLRVPAIANALEDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAM 160
           SHPE   RVPAI NALE  ELTPKF+GS ++EL N+K A+V+DI +VH K+YV GLEKAM
Sbjct: 82  SHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAM 141

Query: 161 DRASQDGLILIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRP 220
           D AS  GLI IEGSGPTYAT+TTF +SL+AAGAG++L+DSV+ AS+   +PPIGFALIRP
Sbjct: 142 DEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRP 201

Query: 221 PGHHAFPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFF 280
           PGHHA PKGPMGFCVFGNVAIAAR+AQR HGLKR+FIIDFD HHGNGT+DAF +D DIFF
Sbjct: 202 PGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFF 261

Query: 281 LSTHQDGSYPGTGKIDEVGRGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDI 340
           LSTHQDGSYPGTGKI ++G+G GEGTTLN+PLPGGSGD AM+ VF+E+IVPCAQRFKPDI
Sbjct: 262 LSTHQDGSYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDI 321

Query: 341 ILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYS 400
           ILVSAGYDAHVLDPLANLQFTT TYY LA +IK+LAKE+C GRCVFFLEGGYNLESLS S
Sbjct: 322 ILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNLESLSSS 381

Query: 401 VADSFRAFLDEPSLASGFDNPAILYEEPSRKFKQVIHKVKQIHLL 442
           VADSFRA L E SLAS FDNPA LY+EP RK +  I + K IH L
Sbjct: 382 VADSFRALLGEDSLASEFDNPAYLYDEPMRKVRDAIQRAKSIHCL 423

[Close]

BLAST of Lsi01G011620 vs. TAIR10
Match: AT3G18520.2 (AT3G18520.2 histone deacetylase 15)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-44
Identity = 120/345 (34.78%), Postives = 172/345 (49.86%), Query Frame = 1


Query: 67  STSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTPKFQGSNV 126
           S+S   S    +D   +++S         + HPE   R+ AIA +L    + P       
Sbjct: 143 SSSATSSTAVGFDERMLLHSEFEVKA---QPHPERPDRLRAIAASLATAGVFP----GRC 202

Query: 127 IELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATTFNESLVA 186
           + + N +  +  ++  VH+  +V     A+D  SQ  L+    +  TYA   +   + +A
Sbjct: 203 LPI-NAREITKQELQMVHTSEHV----DAVDTTSQ--LLYSYFTSDTYANEYSARAARLA 262

Query: 187 AGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVH 246
           AG    L   +       KN   GFAL+RPPGHHA  +  MGFC+  N A+AA  AQ   
Sbjct: 263 AGLCADLATDIFTGR--VKN---GFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAA- 322

Query: 247 GLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQ---DGSYPGTGKIDEVGRGDGEGTT 306
           G K+V I+D+D HHGNGT + F  +  + ++S H+      YPGTG  DEVG   GEG  
Sbjct: 323 GAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYC 382

Query: 307 LNIPLP-GGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYY 366
           +N+P   GG GD      F  V++P A  F PD +++SAG+DA   DPL     T   Y 
Sbjct: 383 VNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGY- 442

Query: 367 MLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDE 408
              S + Q+  +LC G+ +  LEGGYNL S+S S     +  L E
Sbjct: 443 ---SRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGE 463

[Close]

BLAST of Lsi01G011620 vs. TAIR10
Match: AT1G08460.1 (AT1G08460.1 histone deacetylase 8)

HSP 1 Score: 166.0 bits (419), Expect = 5.2e-41
Identity = 100/349 (28.65%), Postives = 165/349 (47.28%), Query Frame = 1


Query: 96  ESHPESHLRVPAIANALEDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKA 155
           E HPE+  RV  + + L    + P       +      PA V +++  H+  Y+  L +A
Sbjct: 37  EKHPENADRVRNMLSILRRGPIAPHVNWFTGL------PAIVSELLMFHTSEYIEKLVEA 96

Query: 156 MDRASQDGLILIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIR 215
            D++ +      E +  T+ +  ++  +L+AAG  LS +  ++       +  I +AL+R
Sbjct: 97  -DKSGER----CEIAAGTFMSPGSWEAALLAAGTTLSAMQHILDC-----HGKIAYALVR 156

Query: 216 PPGHHAFPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIF 275
           PPGHH+ P    G+C   N A+A + A       RV +ID D H+GNGT++ FY    + 
Sbjct: 157 PPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVL 216

Query: 276 FLSTHQD-----GSYPGTGKIDEVGRGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQ 335
            +S H +      S+P  G IDE+G   G G  LN+PLP G+GD   +   +E++VP  +
Sbjct: 217 TVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDRGYEYAMNELVVPAVR 276

Query: 336 RFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNL 395
           RF PD++++  G D+   DP      T   Y  +   ++ +A+E   GR +   EGGY++
Sbjct: 277 RFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHGRLLMVQEGGYHV 336

Query: 396 ESLSYSVADSFRAFLDEPSLASGFDNPAILYEEPSRKFKQVIHKVKQIH 440
              +Y +       L  P       +P   Y E        +  +K  H
Sbjct: 337 TYAAYCLHAMLEGVLKIPE--PHLSDPIAYYPEEEANAVAAVESIKTYH 367

[Close]

BLAST of Lsi01G011620 vs. TAIR10
Match: AT5G61060.2 (AT5G61060.2 histone deacetylase 5)

HSP 1 Score: 160.2 bits (404), Expect = 2.9e-39
Identity = 105/326 (32.21%), Postives = 160/326 (49.08%), Query Frame = 1


Query: 96  ESHPESHLRVPAIANALEDMELTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKA 155
           E HPE   R+  I    E ++L    Q   V+       A    +  VH+K +V  L K+
Sbjct: 44  EDHPECPDRIRVI---WEKLQLAGVSQRCVVL---GSSKAEDKHLQLVHTKDHV-NLVKS 103

Query: 156 MDRASQDGLI--LIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFAL 215
           +    +D     +       Y    +   + +AAG+ + L + V +          GFA+
Sbjct: 104 ISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEGELD-----CGFAI 163

Query: 216 IRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVH---GLKRVFIIDFDAHHGNGTSDAFYD 275
           +RPPGHHA     MGFC+F NVA+AA +        G+K++ I+D+D HHGNGT   F+ 
Sbjct: 164 VRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWK 223

Query: 276 DSDIFFLSTHQD---GSYPG--TGKIDEVGRGDGEGTTLNIPLPGGS-GDYAMKMVFDEV 335
           D  + F S H+    G YP    G  + VG G GEG  +N+P   G  GD      +D +
Sbjct: 224 DPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHI 283

Query: 336 IVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFL 395
           ++P A+ F PD+I +SAG+DA + DPL     T   Y ++   +     E  +G+ V  L
Sbjct: 284 LIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKVGVELMEFAQGKIVLAL 343

Query: 396 EGGYNLESLSYSVADSFRAFLDEPSL 411
           EGGYNL+S++ S     +  L++  +
Sbjct: 344 EGGYNLDSIAKSSLACVQVLLEDKQI 357

[Close]

BLAST of Lsi01G011620 vs. TAIR10
Match: AT5G61070.1 (AT5G61070.1 histone deacetylase of the RPD3/HDA1 superfamily 18)

HSP 1 Score: 156.0 bits (393), Expect = 5.4e-38
Identity = 98/279 (35.13%), Postives = 146/279 (52.33%), Query Frame = 1


Query: 143 VHSKSYVAGLEKAMDRASQDGLI--LIEGSGPTYATATTFNESLVAAGAGLSLLDSVVKA 202
           VH+K +V  L K++    +D     +       Y    +   + +AAG+ + + + V + 
Sbjct: 118 VHTKKHV-NLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVVKVAEKVAEG 177

Query: 203 SKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAARYAQRVH---GLKRVFIIDFD 262
                    GFA++RPPGHHA     MGFC+F NVA+AA +         +K++ I+D+D
Sbjct: 178 ELD-----CGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWD 237

Query: 263 AHHGNGTSDAFYDDSDIFFLSTHQD--GS-YP--GTGKIDEVGRGDGEGTTLNIPLP-GG 322
            HHGNGT   F+ DS +   S H+   GS YP    G  + VG G GEG  +N+P   GG
Sbjct: 238 IHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGG 297

Query: 323 SGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQL 382
            GD     V++ +++P  + FKPDIIL+SAG+DA + DPL     T   Y ++   + + 
Sbjct: 298 CGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEF 357

Query: 383 AKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSL 411
           A     G+ V  LEGGYNLESL  S     +  L++  +
Sbjct: 358 A----HGKIVLALEGGYNLESLGKSSLACVQVLLEDKQI 386

[Close]

BLAST of Lsi01G011620 vs. NCBI nr
Match: gi|449461867|ref|XP_004148663.1| (PREDICTED: histone deacetylase 14 isoform X1 [Cucumis sativus])

HSP 1 Score: 806.2 bits (2081), Expect = 2.8e-230
Identity = 401/442 (90.72%), Postives = 419/442 (94.80%), Query Frame = 1


Query: 1   MEFRILQQSPSCYAGNVFCLVQPRLG-RKFLSWAPTNTTFLQKICSRNEARRKTQRRSEV 60
           MEFRILQQSPS YAG+  CLV PRLG RKF  W+  NTTFLQK+  R E RR+ Q RSEV
Sbjct: 1   MEFRILQQSPSRYAGSFLCLVNPRLGIRKFFGWSSANTTFLQKMSLRIEPRRQPQYRSEV 60

Query: 61  NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTP 120
           NR AVLCSTSLN+SPLA+YDNVKI+YS+AAATGHN+ESHPESHLRVPAIANALEDMELTP
Sbjct: 61  NRGAVLCSTSLNDSPLANYDNVKIVYSIAAATGHNKESHPESHLRVPAIANALEDMELTP 120

Query: 121 KFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATT 180
           KF GSNVI+L+NYKPASVDDIVSVHSKSYVAGLEKAMDRAS+DGLILIEGSGPTYATATT
Sbjct: 121 KFLGSNVIQLENYKPASVDDIVSVHSKSYVAGLEKAMDRASRDGLILIEGSGPTYATATT 180

Query: 181 FNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAA 240
           FNESLVAAGAG+SL+DSVVKAS+T+KNPPIGFALIRPPGHHA PKGPMGFCVFGNVAIAA
Sbjct: 181 FNESLVAAGAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAA 240

Query: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGRGDG 300
           RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVG GDG
Sbjct: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGCGDG 300

Query: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360
           EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG
Sbjct: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360

Query: 361 TYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDNPAI 420
           TYYMLASNIKQLAKELC GRC+FFLEGGYNLESLSYSVADSFRAFLDEPS+AS FDNPAI
Sbjct: 361 TYYMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVADSFRAFLDEPSMASEFDNPAI 420

Query: 421 LYEEPSRKFKQVIHKVKQIHLL 442
           LYEEPSRKFKQVI KVKQIH L
Sbjct: 421 LYEEPSRKFKQVIQKVKQIHSL 442

[Close]

BLAST of Lsi01G011620 vs. NCBI nr
Match: gi|659080942|ref|XP_008441062.1| (PREDICTED: histone deacetylase 14 isoform X1 [Cucumis melo])

HSP 1 Score: 802.7 bits (2072), Expect = 3.1e-229
Identity = 398/442 (90.05%), Postives = 418/442 (94.57%), Query Frame = 1


Query: 1   MEFRILQQSPSCYAGNVFCLVQPRLG-RKFLSWAPTNTTFLQKICSRNEARRKTQRRSEV 60
           MEFRILQQSPS YAG+  CLV+PRLG RKF  W+  NTTFLQK   R E RR+ Q RSEV
Sbjct: 13  MEFRILQQSPSRYAGSFLCLVKPRLGIRKFFGWSSANTTFLQKTSLRIEPRRQPQYRSEV 72

Query: 61  NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTP 120
           NR A+LCSTSLN+SPLA+YDNVKI+YS+AAATGHN+ESHPESHLRVPAIANALEDMELTP
Sbjct: 73  NRGAILCSTSLNDSPLANYDNVKIVYSIAAATGHNKESHPESHLRVPAIANALEDMELTP 132

Query: 121 KFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATT 180
           KF GSN+I+L+NYKPASVDDIVSVHSKSYVAGLEKAMDRAS+DGLILIEGSGPTYATATT
Sbjct: 133 KFLGSNIIQLENYKPASVDDIVSVHSKSYVAGLEKAMDRASRDGLILIEGSGPTYATATT 192

Query: 181 FNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAA 240
           FNESLVAAGAG+SL+DSVVKAS+T+KNPPIGFALIRPPGHHA PKGPMGFCVFGNVAIAA
Sbjct: 193 FNESLVAAGAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAA 252

Query: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGRGDG 300
           RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDD DIFFLSTHQDGSYPGTGK+ EVGRGDG
Sbjct: 253 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDPDIFFLSTHQDGSYPGTGKMGEVGRGDG 312

Query: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360
           EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG
Sbjct: 313 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 372

Query: 361 TYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDNPAI 420
           TYYMLASNIKQLAKELC GRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLAS FDNPAI
Sbjct: 373 TYYMLASNIKQLAKELCRGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASEFDNPAI 432

Query: 421 LYEEPSRKFKQVIHKVKQIHLL 442
           LYEEPSRKFKQVI +VKQIH L
Sbjct: 433 LYEEPSRKFKQVIQQVKQIHSL 454

[Close]

BLAST of Lsi01G011620 vs. NCBI nr
Match: gi|778717727|ref|XP_011657747.1| (PREDICTED: histone deacetylase 14 isoform X2 [Cucumis sativus])

HSP 1 Score: 763.1 bits (1969), Expect = 2.7e-217
Identity = 384/442 (86.88%), Postives = 400/442 (90.50%), Query Frame = 1


Query: 1   MEFRILQQSPSCYAGNVFCLVQPRLG-RKFLSWAPTNTTFLQKICSRNEARRKTQRRSEV 60
           MEFRILQQSPS YAG+  CLV PRLG RKF  W+  NTTFLQK+  R E RR+ Q RSEV
Sbjct: 1   MEFRILQQSPSRYAGSFLCLVNPRLGIRKFFGWSSANTTFLQKMSLRIEPRRQPQYRSEV 60

Query: 61  NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTP 120
           NR AVLCSTSLN+SPLA+YDNVKI+YS+AAATGHN+ESHPESHLRVPAIANALEDMELTP
Sbjct: 61  NRGAVLCSTSLNDSPLANYDNVKIVYSIAAATGHNKESHPESHLRVPAIANALEDMELTP 120

Query: 121 KFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATT 180
           KF GSNVI+L+NYKPASVDDIVSVHSKSYVAGLEKAMDRAS+DGLILIEGSGPTYATAT 
Sbjct: 121 KFLGSNVIQLENYKPASVDDIVSVHSKSYVAGLEKAMDRASRDGLILIEGSGPTYATAT- 180

Query: 181 FNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAA 240
                             VKAS+T+KNPPIGFALIRPPGHHA PKGPMGFCVFGNVAIAA
Sbjct: 181 ------------------VKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAA 240

Query: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGRGDG 300
           RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVG GDG
Sbjct: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGCGDG 300

Query: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360
           EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG
Sbjct: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360

Query: 361 TYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDNPAI 420
           TYYMLASNIKQLAKELC GRC+FFLEGGYNLESLSYSVADSFRAFLDEPS+AS FDNPAI
Sbjct: 361 TYYMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVADSFRAFLDEPSMASEFDNPAI 420

Query: 421 LYEEPSRKFKQVIHKVKQIHLL 442
           LYEEPSRKFKQVI KVKQIH L
Sbjct: 421 LYEEPSRKFKQVIQKVKQIHSL 423

[Close]

BLAST of Lsi01G011620 vs. NCBI nr
Match: gi|659080946|ref|XP_008441064.1| (PREDICTED: histone deacetylase 14 isoform X2 [Cucumis melo])

HSP 1 Score: 759.6 bits (1960), Expect = 3.0e-216
Identity = 381/442 (86.20%), Postives = 399/442 (90.27%), Query Frame = 1


Query: 1   MEFRILQQSPSCYAGNVFCLVQPRLG-RKFLSWAPTNTTFLQKICSRNEARRKTQRRSEV 60
           MEFRILQQSPS YAG+  CLV+PRLG RKF  W+  NTTFLQK   R E RR+ Q RSEV
Sbjct: 13  MEFRILQQSPSRYAGSFLCLVKPRLGIRKFFGWSSANTTFLQKTSLRIEPRRQPQYRSEV 72

Query: 61  NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDMELTP 120
           NR A+LCSTSLN+SPLA+YDNVKI+YS+AAATGHN+ESHPESHLRVPAIANALEDMELTP
Sbjct: 73  NRGAILCSTSLNDSPLANYDNVKIVYSIAAATGHNKESHPESHLRVPAIANALEDMELTP 132

Query: 121 KFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYATATT 180
           KF GSN+I+L+NYKPASVDDIVSVHSKSYVAGLEKAMDRAS+DGLILIEGSGPTYATAT 
Sbjct: 133 KFLGSNIIQLENYKPASVDDIVSVHSKSYVAGLEKAMDRASRDGLILIEGSGPTYATAT- 192

Query: 181 FNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVAIAA 240
                             VKAS+T+KNPPIGFALIRPPGHHA PKGPMGFCVFGNVAIAA
Sbjct: 193 ------------------VKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAA 252

Query: 241 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGRGDG 300
           RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDD DIFFLSTHQDGSYPGTGK+ EVGRGDG
Sbjct: 253 RYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDPDIFFLSTHQDGSYPGTGKMGEVGRGDG 312

Query: 301 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 360
           EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG
Sbjct: 313 EGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTG 372

Query: 361 TYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDNPAI 420
           TYYMLASNIKQLAKELC GRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLAS FDNPAI
Sbjct: 373 TYYMLASNIKQLAKELCRGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASEFDNPAI 432

Query: 421 LYEEPSRKFKQVIHKVKQIHLL 442
           LYEEPSRKFKQVI +VKQIH L
Sbjct: 433 LYEEPSRKFKQVIQQVKQIHSL 435

[Close]

BLAST of Lsi01G011620 vs. NCBI nr
Match: gi|567879225|ref|XP_006432171.1| (hypothetical protein CICLE_v10001184mg [Citrus clementina])

HSP 1 Score: 619.8 bits (1597), Expect = 3.7e-174
Identity = 314/445 (70.56%), Postives = 360/445 (80.90%), Query Frame = 1


Query: 1   MEFRILQQSPSCYAGNVFCLVQPRLGRKFLSWAPTNT-TFLQKICSRNEARRKT--QRRS 60
           ME ++L+  P  + GN+F L+   + +    W   N   F  K+       + +  QR++
Sbjct: 1   MELQMLK--PPTFPGNLFSLMSHHVRQ----WKSHNQFNFDTKLLGHRHIWKYSSLQRKN 60

Query: 61  EV-NRAAVLCSTSLNESPLAHYDNVKIIYSVAAATGHNQESHPESHLRVPAIANALEDME 120
            + N+   +CS +  +       + ++IY VA A GHNQE HPESHLRVPAI +ALE ME
Sbjct: 61  LIKNKRGFICSYTAEKDLNLQLSDARVIYGVAPALGHNQELHPESHLRVPAIVSALEKME 120

Query: 121 LTPKFQGSNVIELQNYKPASVDDIVSVHSKSYVAGLEKAMDRASQDGLILIEGSGPTYAT 180
           LT +F+GS +IEL+N+ PASVDDI SVH+++YV+GLEKAMDRASQ G+ILIEGSGPTYAT
Sbjct: 121 LTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT 180

Query: 181 ATTFNESLVAAGAGLSLLDSVVKASKTYKNPPIGFALIRPPGHHAFPKGPMGFCVFGNVA 240
           ATTF ESL AAGAG++L+DSVV ASK   +PP+GFALIRPPGHHA PKGPMGFCVFGNVA
Sbjct: 181 ATTFQESLAAAGAGIALVDSVVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 240

Query: 241 IAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEVGR 300
           IAARYAQR HGLKRVFIIDFD HHGNGT+DAFYDD DIFFLSTHQDGSYPGTGKIDEVGR
Sbjct: 241 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 300

Query: 301 GDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQF 360
           GDGEG+TLN+PLPGGSGD AM+ VF EVIVPCAQRFKPD+ILVSAGYDAHVLDPLA+LQF
Sbjct: 301 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 360

Query: 361 TTGTYYMLASNIKQLAKELCEGRCVFFLEGGYNLESLSYSVADSFRAFLDEPSLASGFDN 420
           TTGTYYMLA+NIKQLAK+LC  RCVFFLEGGYNL SLSYSVADSFRAFL EPS AS FDN
Sbjct: 361 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 420

Query: 421 PAILYEEPSRKFKQVIHKVKQIHLL 442
           PAILYEEPS K KQ I +VK IH L
Sbjct: 421 PAILYEEPSAKVKQAIERVKHIHSL 439

The following BLAST results are available for this feature:

BLAST of Lsi01G011620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HDA14_ARATH	6.6e-163	69.88	Histone deacetylase 14 OS=Arabidopsis thaliana GN=HDA14 PE=2 SV=1	[more]
Y130_ARCFU	7.3e-53	36.54	Uncharacterized protein AF_0130 OS=Archaeoglobus fulgidus (strain ATCC 49558 / V...	[more]
Y1194_METTH	5.8e-50	38.24	Uncharacterized protein MTH_1194 OS=Methanothermobacter thermautotrophicus (stra...	[more]
HDA6_CAEEL	3.5e-47	32.49	Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=3 SV=2	[more]
HDA15_ARATH	2.4e-43	34.78	Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2	[more]

BLAST of Lsi01G011620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHP9_CUCSA	2.0e-230	90.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483260 PE=4 SV=1	[more]
V4T773_9ROSI	2.6e-174	70.56	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001184mg PE=4 SV=1	[more]
V4T1Y8_9ROSI	2.9e-173	77.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001184mg PE=4 SV=1	[more]
W9QLS5_9ROSA	8.4e-173	70.07	Uncharacterized protein OS=Morus notabilis GN=L484_020688 PE=4 SV=1	[more]
B9RRD2_RICCO	1.9e-172	77.92	Histone deacetylase, putative OS=Ricinus communis GN=RCOM_1187430 PE=4 SV=1	[more]

BLAST of Lsi01G011620 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33470.1	3.7e-164	69.88	histone deacetylase 14	[more]
AT3G18520.2	1.3e-44	34.78	histone deacetylase 15	[more]
AT1G08460.1	5.2e-41	28.65	histone deacetylase 8	[more]
AT5G61060.2	2.9e-39	32.21	histone deacetylase 5	[more]
AT5G61070.1	5.4e-38	35.13	histone deacetylase of the RPD3/HDA1 superfamily 18	[more]

BLAST of Lsi01G011620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461867\|ref\|XP_004148663.1\|	2.8e-230	90.72	PREDICTED: histone deacetylase 14 isoform X1 [Cucumis sativus]	[more]
gi\|659080942\|ref\|XP_008441062.1\|	3.1e-229	90.05	PREDICTED: histone deacetylase 14 isoform X1 [Cucumis melo]	[more]
gi\|778717727\|ref\|XP_011657747.1\|	2.7e-217	86.88	PREDICTED: histone deacetylase 14 isoform X2 [Cucumis sativus]	[more]
gi\|659080946\|ref\|XP_008441064.1\|	3.0e-216	86.20	PREDICTED: histone deacetylase 14 isoform X2 [Cucumis melo]	[more]
gi\|567879225\|ref\|XP_006432171.1\|	3.7e-174	70.56	hypothetical protein CICLE_v10001184mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023801	His_deacetylse_dom
IPR000286	His_deacetylse

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0070932	histone H3 deacetylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G011620.1	Lsi01G011620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000286	Histone deacetylase superfamily	PRINTS	PR01270	HDASUPER	coord: 250..265 score: 9.1E-14coord: 334..344 score: 9.1E-14coord: 216..239 score: 9.1
IPR000286	Histone deacetylase superfamily	PANTHER	PTHR10625	HISTONE DEACETYLASE	coord: 45..439 score: 8.3E
IPR023801	Histone deacetylase domain	GENE3D	G3DSA:3.40.800.20		coord: 81..439 score: 4.0
IPR023801	Histone deacetylase domain	PFAM	PF00850	Hist_deacetyl	coord: 98..399 score: 4.9
None	No IPR available	PANTHER	PTHR10625:SF104	HISTONE DEACETYLASE 6	coord: 45..439 score: 8.3E
None	No IPR available	unknown	SSF52768	Arginase/deacetylase	coord: 83..409 score: 2.83

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G011620	Csa1G169930	Cucumber (Chinese Long) v2	culsiB021
Lsi01G011620	Csa6G483260	Cucumber (Chinese Long) v2	culsiB434
Lsi01G011620	CSPI06G26350	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G011620	CSPI01G15100	Wild cucumber (PI 183967)	cpilsiB020
Lsi01G011620	Cucsa.100840	Cucumber (Gy14) v1	cgylsiB125
Lsi01G011620	CmaCh03G011040	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G011620	CmoCh03G010870	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G011620	Cla008425	Watermelon (97103) v1	lsiwmB142
Lsi01G011620	MELO3C008064	Melon (DHL92) v3.5.1	lsimeB150
Lsi01G011620	ClCG01G015340	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G011620	MELO3C008064.2	Melon (DHL92) v3.6.1	lsimedB157
Lsi01G011620	Cla97C01G011200	Watermelon (97103) v2	lsiwmbB114
Lsi01G011620	Cla97C01G014290	Watermelon (97103) v2	lsiwmbB115
Lsi01G011620	Bhi03G001034	Wax gourd	lsiwgoB183
Lsi01G011620	Cp4.1LG10g03550	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G011620	CsGy6G025830	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G011620	CsGy1G014880	Cucumber (Gy14) v2	cgyblsiB017
Lsi01G011620	Carg10527	Silver-seed gourd	carlsiB214
Lsi01G011620	CsaV3_1G015200	Cucumber (Chinese Long) v3	cuclsiB021
Lsi01G011620	CsaV3_6G041560	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G011620	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G011620	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G011620	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G011620	Silver-seed gourd	carlsiB742