Lsi01G008660 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G008660
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr01 : 6963644 .. 6965560 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAGATTTTACCGAACTATTTCCGTCTTCAACAAGGAATTACTTCTCAGGAAATCGAACAGCCCATTACCCATCTTTCTCAGGAAACCGCACCTGTCTCTTTCTCTAATAAGCTCTCAGACGAGTCCAAAGCATGGAGGGTTTGGGCCTATTTACCTGAAAACAACTCCGCATGACTCCACTCATGATGGAGACGCCGACGAATTTTCCGTCGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTTGTTTTGCGCTCCGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCTGGAAATTTGGGTTACCGGTTCTTCGTCTGGGCTTCGAAGCAACCGGGTTATAGGCATAGTTATGAAGTGTATAAAGCTATGATCAAAACTTTGGGGAAGATGAGACAGTTCGGAGCCGTTTGGGCGTTGATTGAGGAAATGAGAAAAGAGAATCCATACATGTTAACCCCCGAAGTGTTCATTGTTTTGATGAGGAGATTCGCTTCCGCCAGAATGGTAAAAAAAGCAGTTGAGGTGCTTGATGAAATGCCTAAGTATGGGTGCGAACCTGATGAATACGTATTTGGGTGTCTTCTTGATGCTTTGTGCAAAAATGGCAGTGTTAAGGAAGCAGCTTCGCTATTTGAGGATATGAGAATTCGGTTCAATCCAAGTTTGAGACATTTCACGTCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAGGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCTGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGAAAAATGCGGGATGCTTTTGATCTTTTGGAGGAGATGAGGAAAGTGAACTGTGGGCCAAATGCGGCTTCTTTTACAATTTTGATTCAGGCATTCTGTAAAATGGAAAAGATGGATGAGGCAATGCGTATTTTCGTCGAGATGCAAGGGAATGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGGGGGAACACAGACAGAGCTTATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAAGAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATCGGTTGCTTACCAGACCTTAATATCTATAATACAGTGATAAGGTTAGTATGCAAGTTGGGGGAGCTTAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCAGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAAATGAAGCTTGTGATTACTTCAAAGAAATGGTTGAAAGAGGTCTATTATCTGCTCCACAGTATGGTACTTTGAAGGAGTTAACAAATGCTCTTTTGAGAGCTCAAAAGCTTGAAATGGCAAAAAACATGTGGAGCTGTATAACTACTAAAGGATGTGAACTTAATGTCAATGCTTGGACAATTTGGATTCACGCACTTTTTTCAAATGGGCATGTGAAGGAGGCTTGTTCGTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCAGATACTTTTGCCAAGCTAATGCGTGGCCTGAAGAAACTTTACCATAGACAACTAGCCGTTGAGATCACAGAGAAGGTGAGGAAGATGGCTGCAGACAGGCAAATCACCTTCAAGATGTATAAGAGGCGGGGGGAGAGAGATTTAAAAGAGAAAATCAAGGCCAAAATAGATGGAAGGAAAAGTAGAGCACGTAGACGCCGCTGGAGTGGAGTGCACAAGAAAACTAAAACCCTGTAA

mRNA sequence

ATGCACAGATTTTACCGAACTATTTCCGTCTTCAACAAGGAATTACTTCTCAGGAAATCGAACAGCCCATTACCCATCTTTCTCAGGAAACCGCACCTGTCTCTTTCTCTAATAAGCTCTCAGACGAGTCCAAAGCATGGAGGGTTTGGGCCTATTTACCTGAAAACAACTCCGCATGACTCCACTCATGATGGAGACGCCGACGAATTTTCCGTCGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTTGTTTTGCGCTCCGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCTGGAAATTTGGGTTACCGGTTCTTCGTCTGGGCTTCGAAGCAACCGGGTTATAGGCATAGTTATGAAGTGTATAAAGCTATGATCAAAACTTTGGGGAAGATGAGACAGTTCGGAGCCGTTTGGGCGTTGATTGAGGAAATGAGAAAAGAGAATCCATACATGTTAACCCCCGAAGTGTTCATTGTTTTGATGAGGAGATTCGCTTCCGCCAGAATGGTAAAAAAAGCAGTTGAGGTGCTTGATGAAATGCCTAAGTATGGGTGCGAACCTGATGAATACGTATTTGGGTGTCTTCTTGATGCTTTGTGCAAAAATGGCAGTGTTAAGGAAGCAGCTTCGCTATTTGAGGATATGAGAATTCGGTTCAATCCAAGTTTGAGACATTTCACGTCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAGGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCTGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGAAAAATGCGGGATGCTTTTGATCTTTTGGAGGAGATGAGGAAAGTGAACTGTGGGCCAAATGCGGCTTCTTTTACAATTTTGATTCAGGCATTCTGTAAAATGGAAAAGATGGATGAGGCAATGCGTATTTTCGTCGAGATGCAAGGGAATGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGGGGGAACACAGACAGAGCTTATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAAGAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATCGGTTGCTTACCAGACCTTAATATCTATAATACAGTGATAAGGTTAGTATGCAAGTTGGGGGAGCTTAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCAGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAAATGAAGCTTGTGATTACTTCAAAGAAATGGTTGAAAGAGGTCTATTATCTGCTCCACAGTATGGTACTTTGAAGGAGTTAACAAATGCTCTTTTGAGAGCTCAAAAGCTTGAAATGGCAAAAAACATGTGGAGCTGTATAACTACTAAAGGATGTGAACTTAATGTCAATGCTTGGACAATTTGGATTCACGCACTTTTTTCAAATGGGCATGTGAAGGAGGCTTGTTCGTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCAGATACTTTTGCCAAGCTAATGCGTGGCCTGAAGAAACTTTACCATAGACAACTAGCCGTTGAGATCACAGAGAAGGTGAGGAAGATGGCTGCAGACAGGCAAATCACCTTCAAGATGTATAAGAGGCGGGGGGAGAGAGATTTAAAAGAGAAAATCAAGGCCAAAATAGATGGAAGGAAAAGTAGAGCACGTAGACGCCGCTGGAGTGGAGTGCACAAGAAAACTAAAACCCTGTAA

Coding sequence (CDS)

ATGCACAGATTTTACCGAACTATTTCCGTCTTCAACAAGGAATTACTTCTCAGGAAATCGAACAGCCCATTACCCATCTTTCTCAGGAAACCGCACCTGTCTCTTTCTCTAATAAGCTCTCAGACGAGTCCAAAGCATGGAGGGTTTGGGCCTATTTACCTGAAAACAACTCCGCATGACTCCACTCATGATGGAGACGCCGACGAATTTTCCGTCGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTTGTTTTGCGCTCCGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCTGGAAATTTGGGTTACCGGTTCTTCGTCTGGGCTTCGAAGCAACCGGGTTATAGGCATAGTTATGAAGTGTATAAAGCTATGATCAAAACTTTGGGGAAGATGAGACAGTTCGGAGCCGTTTGGGCGTTGATTGAGGAAATGAGAAAAGAGAATCCATACATGTTAACCCCCGAAGTGTTCATTGTTTTGATGAGGAGATTCGCTTCCGCCAGAATGGTAAAAAAAGCAGTTGAGGTGCTTGATGAAATGCCTAAGTATGGGTGCGAACCTGATGAATACGTATTTGGGTGTCTTCTTGATGCTTTGTGCAAAAATGGCAGTGTTAAGGAAGCAGCTTCGCTATTTGAGGATATGAGAATTCGGTTCAATCCAAGTTTGAGACATTTCACGTCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAGGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCTGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGAAAAATGCGGGATGCTTTTGATCTTTTGGAGGAGATGAGGAAAGTGAACTGTGGGCCAAATGCGGCTTCTTTTACAATTTTGATTCAGGCATTCTGTAAAATGGAAAAGATGGATGAGGCAATGCGTATTTTCGTCGAGATGCAAGGGAATGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGGGGGAACACAGACAGAGCTTATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAAGAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATCGGTTGCTTACCAGACCTTAATATCTATAATACAGTGATAAGGTTAGTATGCAAGTTGGGGGAGCTTAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCAGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAAATGAAGCTTGTGATTACTTCAAAGAAATGGTTGAAAGAGGTCTATTATCTGCTCCACAGTATGGTACTTTGAAGGAGTTAACAAATGCTCTTTTGAGAGCTCAAAAGCTTGAAATGGCAAAAAACATGTGGAGCTGTATAACTACTAAAGGATGTGAACTTAATGTCAATGCTTGGACAATTTGGATTCACGCACTTTTTTCAAATGGGCATGTGAAGGAGGCTTGTTCGTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCAGATACTTTTGCCAAGCTAATGCGTGGCCTGAAGAAACTTTACCATAGACAACTAGCCGTTGAGATCACAGAGAAGGTGAGGAAGATGGCTGCAGACAGGCAAATCACCTTCAAGATGTATAAGAGGCGGGGGGAGAGAGATTTAAAAGAGAAAATCAAGGCCAAAATAGATGGAAGGAAAAGTAGAGCACGTAGACGCCGCTGGAGTGGAGTGCACAAGAAAACTAAAACCCTGTAA

Protein sequence

MHRFYRTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISSQTSPKHGGFGPIYLKTTPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCELNVNAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQITFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL
Homology
[Close]
BLAST of Lsi01G008660 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 6.3e-239
Identity = 409/632 (64.72%), Postives = 503/632 (79.59%), Query Frame = 1 

Query: 1   MHRFYRTISVF--NKELLLRKSN--SPLPIFLRKPHLSLSLISSQTSPKHGGFGPIYLKT 60
           MHRF   +      +++ L  S   S   +  R  H+S +L       +  G G + L+ 
Sbjct: 8   MHRFSPIVEFLLSKRQIFLHYSQFKSRFDLIHRSFHVSRAL--EDNFRRSNGIGLVCLEK 67

Query: 61  TPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGD 120
           + +D T +   DEF+ DVEK YRILRKFH+RVPKLELAL ESGV LR GL ERVL+RCGD
Sbjct: 68  SHNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGD 127

Query: 121 AGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEV 180
           AGNLGYRFFVWA+KQP Y HS EVYK+M+K L KMRQFGAVW LIEEMRKENP ++ PE+
Sbjct: 128 AGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL 187

Query: 181 FIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR 240
           F+VL++RFASA MVKKA+EVLDEMPK+G EPDEYVFGCLLDALCK+GSVK+AA LFEDMR
Sbjct: 188 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 247

Query: 241 IRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRD 300
           +RF  +LR+FTSLLYGWCR GK++EA++VLVQ+ EAGFEPDIV Y NLL GYA AGKM D
Sbjct: 248 MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 307

Query: 301 AFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLIS 360
           A+DLL +MR+    PNA  +T+LIQA CK+++M+EAM++FVEM+   CEADVVTYT L+S
Sbjct: 308 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 367

Query: 361 GFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLP 420
           GFCKWG  D+ Y +LD+MI+KG  PS+L+Y+ IM+AHEKKE  EEC+ELME+MR+I   P
Sbjct: 368 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 427

Query: 421 DLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYF 480
           D+ IYN VIRL CKLGE+KEAVRLW EME  GL+PG+DT+++M++G  SQGCL EA D+F
Sbjct: 428 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 487

Query: 481 KEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKG-CELNVNAWTIWIHAL 540
           KEMV RGL S  QYGTLK L N +L+ +KLEMAK++WSCIT+KG CELNV +WTIWIHAL
Sbjct: 488 KEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHAL 547

Query: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQI 600
           FS G+ KEACSYC++M++ D MPQPDTFAKLM+GLKKLY+R+ A EITEKVR MAA+R++
Sbjct: 548 FSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAAEREM 607

Query: 601 TFKMYKRRGERDLKEKIKAKIDGRKSRARRRR 628
           +FKMYKRRG +DL EK K+K D    + +R R
Sbjct: 608 SFKMYKRRGVQDLTEKAKSKQDREGKKKQRSR 637

[Close]
BLAST of Lsi01G008660 vs. Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 6.9e-238
Identity = 407/643 (63.30%), Postives = 509/643 (79.16%), Query Frame = 1 

Query: 1   MHRFYRTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISS--QTSPKHGGFGPIYLKTTP 60
           M RF   + +   +    ++NS + +  ++ H+S  L +   +++ +  G G +      
Sbjct: 1   MRRFSTIVDLLISKKPSSQANSRIDLICKRFHISRVLNNDFVESTERKNGVGLVC----- 60

Query: 61  HDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAG 120
               H+   DEF+ +VEK+YRILR  H+RVPKLELAL ESG+ LR GL  RVLSRCGDAG
Sbjct: 61  -PEKHE---DEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAG 120

Query: 121 NLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI 180
           NLGYRFF+WA+KQPGY HSYEV K+M+  L KMRQFGAVW LIEEMRK NP ++ PE+F+
Sbjct: 121 NLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV 180

Query: 181 VLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIR 240
           VLMRRFASA MVKKAVEVLDEMPKYG EPDEYVFGCLLDALCKNGSVKEA+ +FEDMR +
Sbjct: 181 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 240

Query: 241 FNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAF 300
           F P+LR+FTSLLYGWCREGK++EA+ VLVQ+KEAG EPDIVV+ NLL GYA AGKM DA+
Sbjct: 241 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 300

Query: 301 DLLEEMRKVNCGPNAASFTILIQAFCKMEK-MDEAMRIFVEMQGNGCEADVVTYTTLISG 360
           DL+ +MRK    PN   +T+LIQA C+ EK MDEAMR+FVEM+  GCEAD+VTYT LISG
Sbjct: 301 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 360

Query: 361 FCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPD 420
           FCKWG  D+ Y +LD+M +KG  PSQ++Y+ IM+AHEKKE+ EEC+EL+E+M++ GC PD
Sbjct: 361 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 420

Query: 421 LNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFK 480
           L IYN VIRL CKLGE+KEAVRLW EMEA GL+PG+DT+++M++GF SQG L EAC++FK
Sbjct: 421 LLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFK 480

Query: 481 EMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCIT--TKGCELNVNAWTIWIHAL 540
           EMV RG+ SAPQYGTLK L N L+R  KLEMAK++WSCI+  T  CELNV+AWTIWIHAL
Sbjct: 481 EMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHAL 540

Query: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQI 600
           ++ GHVKEACSYCLDMM+ DLMPQP+T+AKLM+GL KLY+R +A EITEKV KMA++R++
Sbjct: 541 YAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREM 600

Query: 601 TFKMYKRRGERDLKEKIKAK--IDGRKSRARRRRWSGVHKKTK 637
           +FKMYK++GE DL EK K K   +G+K     +R+ G  ++++
Sbjct: 601 SFKMYKKKGEEDLIEKAKPKGNKEGKKKGTDHQRYKGRGERSR 634

[Close]
BLAST of Lsi01G008660 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 2.1e-69
Identity = 146/441 (33.11%), Postives = 248/441 (56.24%), Query Frame = 1 

Query: 73  DVEKVYRILRKFHTRVPKLEL--ALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASK 132
           DV  V + + K     P+L L  AL +SG+ +   + E VL+R  +AG L YRFF W+ K
Sbjct: 67  DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126

Query: 133 QPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMV 192
           Q  Y HS   Y  MI++  K+RQ+  +W LI  MRK+   ML  E F ++MR++A A+ V
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKV 186

Query: 193 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSLRHFTSLL 252
            +A+   + M KY   P+   F  LL ALCK+ +V++A  +FE+MR RF P  + ++ LL
Sbjct: 187 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL 246

Query: 253 YGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMRKVNCG 312
            GW +E  + +AR V  ++ +AG  PDIV Y+ ++    +AG++ +A  ++  M    C 
Sbjct: 247 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 306

Query: 313 PNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTDRAYEI 372
           P    +++L+  +    +++EA+  F+EM+ +G +ADV  + +LI  FCK       Y +
Sbjct: 307 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 366

Query: 373 LDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVIRLVCK 432
           L  M  KG  P+  S   I+    ++ E +E  ++  +M K+ C PD + Y  VI++ C+
Sbjct: 367 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCE 426

Query: 433 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGLL-SAPQ 492
             E++ A ++W  M   G+ P + T+ V+++G   +    +AC   +EM+E G+  S   
Sbjct: 427 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 486

Query: 493 YGTLKELTNALLRAQKLEMAK 511
           +G L++L   L++ ++ ++ K
Sbjct: 487 FGRLRQL---LIKEEREDVLK 501

[Close]
BLAST of Lsi01G008660 vs. Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.2e-66
Identity = 132/419 (31.50%), Postives = 232/419 (55.37%), Query Frame = 1 

Query: 67  ADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFV 126
           A++ S D E++ +IL KF     K+E  L E+ V L   L E VL +  +AG L    F 
Sbjct: 59  ANDASQDAERICKILTKFTDS--KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFK 118

Query: 127 WASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 186
           WA  Q G++H+   Y A+I++LGK++QF  +W+L+++M+ +   +L+ E F ++ RR+A 
Sbjct: 119 WAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LLSKETFALISRRYAR 178

Query: 187 ARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRI-RFNPSLRH 246
           AR VK+A+    +M ++G + +   F  +LD L K+ +V +A  +F+ M+  RF P ++ 
Sbjct: 179 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 238

Query: 247 FTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMR 306
           +T LL GW +E  +L    V  ++K+ GFEPD+V Y  ++  + +A K  +A     EM 
Sbjct: 239 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 298

Query: 307 KVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTD 366
           + NC P+   F  LI      +K+++A+  F   + +G   +  TY  L+  +C     +
Sbjct: 299 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 358

Query: 367 RAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVI 426
            AY+ +D M  KG  P+  +Y  I+    + +  +E  E+ + M    C P ++ Y  ++
Sbjct: 359 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMV 418

Query: 427 RLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGL 485
           R+ C    L  A+++W EM+  G+ PG+  +  ++     +  L+EAC+YF EM++ G+
Sbjct: 419 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470

[Close]
BLAST of Lsi01G008660 vs. Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.9e-62
Identity = 135/414 (32.61%), Postives = 222/414 (53.62%), Query Frame = 1 

Query: 73  DVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQP 132
           +VE+V +++ +       +E  L E  + L   L   VL R   A    +RFF WA+++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 133 GYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKK 192
           G+ H+   Y +M+  L K RQF  + +++EEM  +   +LT E F + M+ FA+A+  KK
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG--LLTMETFTIAMKAFAAAKERKK 249

Query: 193 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSLRHFTSLLYG 252
           AV + + M KY  +       CLLD+L +    KEA  LF+ ++ RF P++  +T LL G
Sbjct: 250 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 309

Query: 253 WCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMRKVNCGPN 312
           WCR   ++EA  +   + + G +PDIV +N +L G  ++ K  DA  L   M+     PN
Sbjct: 310 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 369

Query: 313 AASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTDRAYEILD 372
             S+TI+I+ FCK   M+ A+  F +M  +G + D   YT LI+GF      D  YE+L 
Sbjct: 370 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 429

Query: 373 NMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVIR--LVCK 432
            M +KGH P   +Y  ++     ++  E    +  +M +    P ++ +N +++   V +
Sbjct: 430 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 489

Query: 433 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGL 485
             E+  AV  W EM   G+ P  ++Y V++ G +S+G   EAC Y +EM+++G+
Sbjct: 490 NYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539

[Close]
BLAST of Lsi01G008660 vs. TrEMBL
Match: A0A0A0KPG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011710 PE=4 SV=1)

HSP 1 Score: 1206.4 bits (3120), Expect = 0.0e+00
Identity = 591/643 (91.91%), Postives = 619/643 (96.27%), Query Frame = 1 

Query: 1   MHRFY-RTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISSQTSP----KHGGFGPIYLK 60
           MHRFY RTI VF+K+    KSNSPL    +KPHLSLSLISSQTSP    + GGFGPI+LK
Sbjct: 1   MHRFYHRTIHVFSKQS--SKSNSPLIFLPKKPHLSLSLISSQTSPNGTTQRGGFGPIHLK 60

Query: 61  TTPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCG 120
           TTPH+S HD DADEFSVDVEKVYRILRKFHTRVPKLELALQESGV++RSGLPERVLSRCG
Sbjct: 61  TTPHESAHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCG 120

Query: 121 DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE 180
           DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE
Sbjct: 121 DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE 180

Query: 181 VFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 240
           VFIVLMRRFAS RMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM
Sbjct: 181 VFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 240

Query: 241 RIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 300
           R+RFNP+LRHFTSLLYGWCREGKI+EA+HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR
Sbjct: 241 RVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 300

Query: 301 DAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLI 360
           DAFDLL EM+KVNCGPNAASFTILIQ+FCK EKMDEAMRIF EMQG+GCEADVVTYTTLI
Sbjct: 301 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 360

Query: 361 SGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCL 420
           SGFCKWGNTD+AYEILD+MIQKGHDPSQLSYLCIMMAHEKKEELEECMEL+EEMRKIGC+
Sbjct: 361 SGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCV 420

Query: 421 PDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDY 480
           PDLNIYNT+IRLVCKLG+LKEAVRLWGEM+AGGLNPGLDTYI+MVHGFLSQGCL EACDY
Sbjct: 421 PDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDY 480

Query: 481 FKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCELNVNAWTIWIHAL 540
           FKEMVERGLLSAPQYGTLKELTNALLRA+KLEMAKNMWSC+TTKGCELNV+AWTIWIHAL
Sbjct: 481 FKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHAL 540

Query: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQI 600
           FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL+HRQLAVEITEKVRKMAADRQI
Sbjct: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMAADRQI 600

Query: 601 TFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           TFKMYKRRGERDLKEKIKAKIDGRK RARRR WSG+HKKTKTL
Sbjct: 601 TFKMYKRRGERDLKEKIKAKIDGRKRRARRRGWSGMHKKTKTL 641

[Close]
BLAST of Lsi01G008660 vs. TrEMBL
Match: W9SJT5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012982 PE=4 SV=1)

HSP 1 Score: 989.6 bits (2557), Expect = 1.8e-285
Identity = 478/635 (75.28%), Postives = 540/635 (85.04%), Query Frame = 1 

Query: 4   FYRTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISSQTSPKHGGFGPIYLKTTPHDSTH 63
           FYR  S+F        S      +L  P    S   +  + +  GF P++L+  P  S  
Sbjct: 5   FYRARSLFTNRHFSLSSQPNTKPYLLSPQTQFSSTQNPHN-RATGFSPVHLEQNPVVSDD 64

Query: 64  DGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYR 123
           D   DEFS DVEK+YRILRKFH+RV KLELALQESGVVLRSGL ERVL RCGDAG+LGYR
Sbjct: 65  DETHDEFSGDVEKIYRILRKFHSRVSKLELALQESGVVLRSGLTERVLGRCGDAGSLGYR 124

Query: 124 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 183
           FFVWASKQPGYR SYEVYKAMI+ LGKMRQFGAVWAL+EEMRKENP ++TPE+F+VLMRR
Sbjct: 125 FFVWASKQPGYRPSYEVYKAMIRALGKMRQFGAVWALLEEMRKENPQLITPEIFVVLMRR 184

Query: 184 FASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSL 243
           FASARMVKKAVEV DEMPKYGCEPDE+VFGCLLDALCKNGSVKEAASLFE+MR++F PSL
Sbjct: 185 FASARMVKKAVEVFDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEEMRVKFTPSL 244

Query: 244 RHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEE 303
           +HFTSLLYGWCREGK++EA+ VLVQ+KEAGFEPD+VVYNNLLGGYAQAGKM DA+DL++E
Sbjct: 245 KHFTSLLYGWCREGKLMEAKFVLVQMKEAGFEPDVVVYNNLLGGYAQAGKMADAYDLMKE 304

Query: 304 MRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGN 363
           MR   C PNAAS+T+LIQA CK EKM+EAMR+FVEMQ +GC+ADV+TYTTLISGFCKWG 
Sbjct: 305 MRGKGCSPNAASYTVLIQALCKREKMEEAMRVFVEMQRSGCDADVMTYTTLISGFCKWGK 364

Query: 364 TDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNT 423
            +R YEILD+MIQ+G  P++ +YL IM+AHEKKEE EEC+EL+ EMRKIGC+PDL IYNT
Sbjct: 365 IERGYEILDSMIQRGFSPNETTYLHIMLAHEKKEEFEECVELIGEMRKIGCVPDLKIYNT 424

Query: 424 VIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERG 483
           VIRL CKL E+KE VRLW E+EA GL+PGLDT++VM+HGFL QGCL EAC YFKEMVERG
Sbjct: 425 VIRLACKLREVKEGVRLWNEIEASGLSPGLDTFVVMIHGFLGQGCLIEACQYFKEMVERG 484

Query: 484 LLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCELNVNAWTIWIHALFSNGHVKE 543
           LLS PQYGTLKEL NALLRA KLEMAK++W+CI  KGCE+NV AWTIWIHALF NGHVKE
Sbjct: 485 LLSGPQYGTLKELLNALLRADKLEMAKDVWTCIVNKGCEINVYAWTIWIHALFKNGHVKE 544

Query: 544 ACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQITFKMYKRR 603
           ACSYCLDMMDAD+MPQPDTFAKLMRGLKKLY+RQ+A EITEKVRKMA DRQ+TFKMYKRR
Sbjct: 545 ACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAEDRQMTFKMYKRR 604

Query: 604 GERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           GERDLKEK K K +GRK RARRRRW G H   K L
Sbjct: 605 GERDLKEKAKEKQNGRKRRARRRRWGGRHGSAKAL 638

[Close]
BLAST of Lsi01G008660 vs. TrEMBL
Match: F6I7J1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0525g00040 PE=4 SV=1)

HSP 1 Score: 980.7 bits (2534), Expect = 8.4e-283
Identity = 469/596 (78.69%), Postives = 529/596 (88.76%), Query Frame = 1 

Query: 43  SPKHGGFGPIYLKTTPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVL 102
           S + GGFG + L++   + T+D + DEFS DVEKVYRILRKFH+RVPKLELALQESGV +
Sbjct: 27  SERRGGFGLVRLESNRENCTYDQNYDEFSADVEKVYRILRKFHSRVPKLELALQESGVAV 86

Query: 103 RSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIE 162
           RSGL ERVL+RCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIK LGKMRQFGAVWALIE
Sbjct: 87  RSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIE 146

Query: 163 EMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN 222
           EMR+ENP  ++P VF+VLMRRFASARMVKKA+EVLDEMPKYGCEPDE+VFGCLLDALCKN
Sbjct: 147 EMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKN 206

Query: 223 GSVKEAASLFEDMRIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYN 282
           GSVKEAASLFEDMRIRF P+L+HFTSLLYGWCREGK++EA++VLVQI+EAGFEPDIVVYN
Sbjct: 207 GSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYN 266

Query: 283 NLLGGYAQAGKMRDAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGN 342
           NLL GYA AGKM DA+DLL+EMR+  C PN  SFT LIQA C  +KM+EAMR+F EMQ  
Sbjct: 267 NLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC 326

Query: 343 GCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEEC 402
           GC AD VTYTTLISGFCKWG   + YE+LDNMIQ+GH P+ ++YL IM AHEKKEELEEC
Sbjct: 327 GCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEEC 386

Query: 403 MELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHG 462
           +ELMEEMRKIGC PDLNIYN VIRL CKLGE+KE VR+W EMEA GL+PGLDT+++M+HG
Sbjct: 387 IELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHG 446

Query: 463 FLSQGCLNEACDYFKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCE 522
           FLSQ CL EAC++FKEMV RGLLSAPQYGTLKEL N+LLRA+KLEM+K++WSCI TKGC+
Sbjct: 447 FLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCD 506

Query: 523 LNVNAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEI 582
           LNV AWTIWIHALFSNGHVKEACSYCLDMMDA +MPQPDTFAKLMRGL+KLY+RQ+A EI
Sbjct: 507 LNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEI 566

Query: 583 TEKVRKMAADRQITFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           TEKVRKMAA+R++TFKMYKRRGER+LKEKIK   DGRK RARRRRW G H +   L
Sbjct: 567 TEKVRKMAAEREMTFKMYKRRGERNLKEKIKEAKDGRKRRARRRRWGGGHGRANIL 622

[Close]
BLAST of Lsi01G008660 vs. TrEMBL
Match: A5ANV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021787 PE=4 SV=1)

HSP 1 Score: 949.5 bits (2453), Expect = 2.1e-273
Identity = 455/566 (80.39%), Postives = 509/566 (89.93%), Query Frame = 1 

Query: 74  VEK-VYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQP 133
           +EK VYRILRKFH+RVPKLELALQESGV +RSGL ERVL+RCGDAGNLGYRFFVWASKQP
Sbjct: 90  IEKTVYRILRKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQP 149

Query: 134 GYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKK 193
           GYRHSYEVYKAMIK LGKMRQFGAVWALIEEMR+ENP  ++P VF+VLMRRFASARMVKK
Sbjct: 150 GYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKK 209

Query: 194 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSLRHFTSLLYG 253
           A+EVLDEMPKYGCEPDE+VFGCLLDALCKNGSVKEAASLFEDMRIRF P+L+HFTSLLYG
Sbjct: 210 AIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYG 269

Query: 254 WCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMRKVNCGPN 313
           WCREGK++EA++VLVQI+EAGFEPDIVVYNNLL GYA AGKM DA+DLL+EMR+  C PN
Sbjct: 270 WCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPN 329

Query: 314 AASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTDRAYEILD 373
             SFT LIQA C  +KM+EAMR+F EMQ  GC AD VTYTTLISGFCKWG   + YE+LD
Sbjct: 330 VMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLD 389

Query: 374 NMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLG 433
           NMIQ+GH P+ ++YL IM AHEKKEELEEC+ELMEEMRKIGC PDLNIYN VIRL CKLG
Sbjct: 390 NMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLG 449

Query: 434 ELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGLLSAPQYGT 493
           E+KE VR+W EMEA GL+PGLDT+++M+HGFLSQ CL EAC++FKEMV RGLLSAPQYGT
Sbjct: 450 EIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGT 509

Query: 494 LKELTNALLRAQKLEMAKNMWSCITTKGCELNVNAWTIWIHALFSNGHVKEACSYCLDMM 553
           LKEL N+LLRA+KLEM+K++WSCI TKGC+LNV AWTIWIHALFSNGHVKEACSYCLDMM
Sbjct: 510 LKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMM 569

Query: 554 DADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQITFKMYKRRGERDLKEKI 613
           DA +MPQPDTFAKLMRGL+KLY+RQ+A EITEKVRKMAA+R++TFKMYKRRGER+LKEKI
Sbjct: 570 DAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKEKI 629

Query: 614 KAKIDGRKSRARRRRWSGVHKKTKTL 639
           K   DGRK RARRRRW G H +   L
Sbjct: 630 KEAKDGRKRRARRRRWGGGHGRANIL 655

[Close]
BLAST of Lsi01G008660 vs. TrEMBL
Match: A0A067KAS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12579 PE=4 SV=1)

HSP 1 Score: 947.2 bits (2447), Expect = 1.0e-272
Identity = 447/599 (74.62%), Postives = 522/599 (87.15%), Query Frame = 1 

Query: 39  SSQTSPKHGGFGPIYLKTTPH---DSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELAL 98
           +S ++    GFG + L+T  +   D+     AD+F+ DVEKVYRILR FH+RVPKLELAL
Sbjct: 48  NSLSNKTANGFGVVCLRTQNNGIEDADGSNKADDFARDVEKVYRILRNFHSRVPKLELAL 107

Query: 99  QESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFG 158
           QESG+V+R GL ERVL+RCGDAGNLGYRFFVWASKQP YRHSYE YKAM+K   KMRQFG
Sbjct: 108 QESGIVMRPGLTERVLNRCGDAGNLGYRFFVWASKQPSYRHSYETYKAMVKIFSKMRQFG 167

Query: 159 AVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCL 218
           AVWAL+EEMRK+N  ++T E+F+VLMRRFASAR+V+KA+EVLDEMPKYGCEPDEYVFGCL
Sbjct: 168 AVWALLEEMRKDNSVLITSELFVVLMRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCL 227

Query: 219 LDALCKNGSVKEAASLFEDMRIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFE 278
           LDALCKNG+VK+AASLFEDM++RF PSL+HFTSLLYGWCREGK++EA+HVLVQ++EAG+E
Sbjct: 228 LDALCKNGTVKQAASLFEDMKLRFRPSLKHFTSLLYGWCREGKLMEAKHVLVQMREAGYE 287

Query: 279 PDIVVYNNLLGGYAQAGKMRDAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRI 338
           PDIVVYNNLL GY+ A KM DAFDLL+EMR+  C PNA S+TILIQA C  EK DEAMR+
Sbjct: 288 PDIVVYNNLLSGYSMARKMTDAFDLLKEMRRRGCEPNANSYTILIQALCGQEKTDEAMRV 347

Query: 339 FVEMQGNGCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEK 398
           FVEM+ NGCEADVVTYT LISGFCKWG  +R Y+ILDNMI+KGH P+QL+YL +M+AHEK
Sbjct: 348 FVEMERNGCEADVVTYTALISGFCKWGKINRGYQILDNMIEKGHMPNQLTYLHVMLAHEK 407

Query: 399 KEELEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDT 458
           KEELE+CMELM +M+K+GC+PDL+IYN VIRL CKLGE+ E VR+W EMEA G +PGLDT
Sbjct: 408 KEELEDCMELMGKMQKVGCVPDLSIYNVVIRLACKLGEVNEGVRVWNEMEANGFSPGLDT 467

Query: 459 YIVMVHGFLSQGCLNEACDYFKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSC 518
           +++M+HGFL QG L +AC YFKEM  RGL+SAPQYG LKEL N+LLR QKLEMAK++WSC
Sbjct: 468 FVIMIHGFLKQGGLVDACLYFKEMTGRGLVSAPQYGILKELLNSLLRGQKLEMAKDVWSC 527

Query: 519 ITTKGCELNVNAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYH 578
           I TKGCELN +AWTIWIHALFSNGHVKEACSYCLDMMDAD+MP+P+TFAKLMRGL+KLY+
Sbjct: 528 ILTKGCELNTDAWTIWIHALFSNGHVKEACSYCLDMMDADVMPKPETFAKLMRGLRKLYN 587

Query: 579 RQLAVEITEKVRKMAADRQITFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKK 635
           RQ A EITEKVRKMAADRQ +FKMYKRRGERDLKEK+KAK DGRK R RRR+W GV  +
Sbjct: 588 RQFAAEITEKVRKMAADRQTSFKMYKRRGERDLKEKVKAKKDGRKRRTRRRQWGGVRSR 646

[Close]
BLAST of Lsi01G008660 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 828.2 bits (2138), Expect = 3.5e-240
Identity = 409/632 (64.72%), Postives = 503/632 (79.59%), Query Frame = 1 

Query: 1   MHRFYRTISVF--NKELLLRKSN--SPLPIFLRKPHLSLSLISSQTSPKHGGFGPIYLKT 60
           MHRF   +      +++ L  S   S   +  R  H+S +L       +  G G + L+ 
Sbjct: 8   MHRFSPIVEFLLSKRQIFLHYSQFKSRFDLIHRSFHVSRAL--EDNFRRSNGIGLVCLEK 67

Query: 61  TPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGD 120
           + +D T +   DEF+ DVEK YRILRKFH+RVPKLELAL ESGV LR GL ERVL+RCGD
Sbjct: 68  SHNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGD 127

Query: 121 AGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEV 180
           AGNLGYRFFVWA+KQP Y HS EVYK+M+K L KMRQFGAVW LIEEMRKENP ++ PE+
Sbjct: 128 AGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL 187

Query: 181 FIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR 240
           F+VL++RFASA MVKKA+EVLDEMPK+G EPDEYVFGCLLDALCK+GSVK+AA LFEDMR
Sbjct: 188 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 247

Query: 241 IRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRD 300
           +RF  +LR+FTSLLYGWCR GK++EA++VLVQ+ EAGFEPDIV Y NLL GYA AGKM D
Sbjct: 248 MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 307

Query: 301 AFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLIS 360
           A+DLL +MR+    PNA  +T+LIQA CK+++M+EAM++FVEM+   CEADVVTYT L+S
Sbjct: 308 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 367

Query: 361 GFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLP 420
           GFCKWG  D+ Y +LD+MI+KG  PS+L+Y+ IM+AHEKKE  EEC+ELME+MR+I   P
Sbjct: 368 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 427

Query: 421 DLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYF 480
           D+ IYN VIRL CKLGE+KEAVRLW EME  GL+PG+DT+++M++G  SQGCL EA D+F
Sbjct: 428 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 487

Query: 481 KEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKG-CELNVNAWTIWIHAL 540
           KEMV RGL S  QYGTLK L N +L+ +KLEMAK++WSCIT+KG CELNV +WTIWIHAL
Sbjct: 488 KEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHAL 547

Query: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQI 600
           FS G+ KEACSYC++M++ D MPQPDTFAKLM+GLKKLY+R+ A EITEKVR MAA+R++
Sbjct: 548 FSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAAEREM 607

Query: 601 TFKMYKRRGERDLKEKIKAKIDGRKSRARRRR 628
           +FKMYKRRG +DL EK K+K D    + +R R
Sbjct: 608 SFKMYKRRGVQDLTEKAKSKQDREGKKKQRSR 637

[Close]
BLAST of Lsi01G008660 vs. TAIR10
Match: AT3G49730.1 (AT3G49730.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 824.7 bits (2129), Expect = 3.9e-239
Identity = 407/643 (63.30%), Postives = 509/643 (79.16%), Query Frame = 1 

Query: 1   MHRFYRTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISS--QTSPKHGGFGPIYLKTTP 60
           M RF   + +   +    ++NS + +  ++ H+S  L +   +++ +  G G +      
Sbjct: 1   MRRFSTIVDLLISKKPSSQANSRIDLICKRFHISRVLNNDFVESTERKNGVGLVC----- 60

Query: 61  HDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAG 120
               H+   DEF+ +VEK+YRILR  H+RVPKLELAL ESG+ LR GL  RVLSRCGDAG
Sbjct: 61  -PEKHE---DEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAG 120

Query: 121 NLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI 180
           NLGYRFF+WA+KQPGY HSYEV K+M+  L KMRQFGAVW LIEEMRK NP ++ PE+F+
Sbjct: 121 NLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV 180

Query: 181 VLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIR 240
           VLMRRFASA MVKKAVEVLDEMPKYG EPDEYVFGCLLDALCKNGSVKEA+ +FEDMR +
Sbjct: 181 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 240

Query: 241 FNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAF 300
           F P+LR+FTSLLYGWCREGK++EA+ VLVQ+KEAG EPDIVV+ NLL GYA AGKM DA+
Sbjct: 241 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 300

Query: 301 DLLEEMRKVNCGPNAASFTILIQAFCKMEK-MDEAMRIFVEMQGNGCEADVVTYTTLISG 360
           DL+ +MRK    PN   +T+LIQA C+ EK MDEAMR+FVEM+  GCEAD+VTYT LISG
Sbjct: 301 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 360

Query: 361 FCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPD 420
           FCKWG  D+ Y +LD+M +KG  PSQ++Y+ IM+AHEKKE+ EEC+EL+E+M++ GC PD
Sbjct: 361 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 420

Query: 421 LNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFK 480
           L IYN VIRL CKLGE+KEAVRLW EMEA GL+PG+DT+++M++GF SQG L EAC++FK
Sbjct: 421 LLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFK 480

Query: 481 EMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCIT--TKGCELNVNAWTIWIHAL 540
           EMV RG+ SAPQYGTLK L N L+R  KLEMAK++WSCI+  T  CELNV+AWTIWIHAL
Sbjct: 481 EMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHAL 540

Query: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQI 600
           ++ GHVKEACSYCLDMM+ DLMPQP+T+AKLM+GL KLY+R +A EITEKV KMA++R++
Sbjct: 541 YAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREM 600

Query: 601 TFKMYKRRGERDLKEKIKAK--IDGRKSRARRRRWSGVHKKTK 637
           +FKMYK++GE DL EK K K   +G+K     +R+ G  ++++
Sbjct: 601 SFKMYKKKGEEDLIEKAKPKGNKEGKKKGTDHQRYKGRGERSR 634

[Close]
BLAST of Lsi01G008660 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 265.0 bits (676), Expect = 1.2e-70
Identity = 146/441 (33.11%), Postives = 248/441 (56.24%), Query Frame = 1 

Query: 73  DVEKVYRILRKFHTRVPKLEL--ALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASK 132
           DV  V + + K     P+L L  AL +SG+ +   + E VL+R  +AG L YRFF W+ K
Sbjct: 67  DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126

Query: 133 QPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMV 192
           Q  Y HS   Y  MI++  K+RQ+  +W LI  MRK+   ML  E F ++MR++A A+ V
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKV 186

Query: 193 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSLRHFTSLL 252
            +A+   + M KY   P+   F  LL ALCK+ +V++A  +FE+MR RF P  + ++ LL
Sbjct: 187 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL 246

Query: 253 YGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMRKVNCG 312
            GW +E  + +AR V  ++ +AG  PDIV Y+ ++    +AG++ +A  ++  M    C 
Sbjct: 247 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 306

Query: 313 PNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTDRAYEI 372
           P    +++L+  +    +++EA+  F+EM+ +G +ADV  + +LI  FCK       Y +
Sbjct: 307 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 366

Query: 373 LDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVIRLVCK 432
           L  M  KG  P+  S   I+    ++ E +E  ++  +M K+ C PD + Y  VI++ C+
Sbjct: 367 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCE 426

Query: 433 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGLL-SAPQ 492
             E++ A ++W  M   G+ P + T+ V+++G   +    +AC   +EM+E G+  S   
Sbjct: 427 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 486

Query: 493 YGTLKELTNALLRAQKLEMAK 511
           +G L++L   L++ ++ ++ K
Sbjct: 487 FGRLRQL---LIKEEREDVLK 501

[Close]
BLAST of Lsi01G008660 vs. TAIR10
Match: AT1G71060.1 (AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-67
Identity = 132/419 (31.50%), Postives = 232/419 (55.37%), Query Frame = 1 

Query: 67  ADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFV 126
           A++ S D E++ +IL KF     K+E  L E+ V L   L E VL +  +AG L    F 
Sbjct: 59  ANDASQDAERICKILTKFTDS--KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFK 118

Query: 127 WASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 186
           WA  Q G++H+   Y A+I++LGK++QF  +W+L+++M+ +   +L+ E F ++ RR+A 
Sbjct: 119 WAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LLSKETFALISRRYAR 178

Query: 187 ARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRI-RFNPSLRH 246
           AR VK+A+    +M ++G + +   F  +LD L K+ +V +A  +F+ M+  RF P ++ 
Sbjct: 179 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 238

Query: 247 FTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMR 306
           +T LL GW +E  +L    V  ++K+ GFEPD+V Y  ++  + +A K  +A     EM 
Sbjct: 239 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 298

Query: 307 KVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTD 366
           + NC P+   F  LI      +K+++A+  F   + +G   +  TY  L+  +C     +
Sbjct: 299 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 358

Query: 367 RAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVI 426
            AY+ +D M  KG  P+  +Y  I+    + +  +E  E+ + M    C P ++ Y  ++
Sbjct: 359 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMV 418

Query: 427 RLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGL 485
           R+ C    L  A+++W EM+  G+ PG+  +  ++     +  L+EAC+YF EM++ G+
Sbjct: 419 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470

[Close]
BLAST of Lsi01G008660 vs. TAIR10
Match: AT3G62540.1 (AT3G62540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-63
Identity = 135/414 (32.61%), Postives = 222/414 (53.62%), Query Frame = 1 

Query: 73  DVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQP 132
           +VE+V +++ +       +E  L E  + L   L   VL R   A    +RFF WA+++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 133 GYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKK 192
           G+ H+   Y +M+  L K RQF  + +++EEM  +   +LT E F + M+ FA+A+  KK
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG--LLTMETFTIAMKAFAAAKERKK 249

Query: 193 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSLRHFTSLLYG 252
           AV + + M KY  +       CLLD+L +    KEA  LF+ ++ RF P++  +T LL G
Sbjct: 250 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 309

Query: 253 WCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEEMRKVNCGPN 312
           WCR   ++EA  +   + + G +PDIV +N +L G  ++ K  DA  L   M+     PN
Sbjct: 310 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 369

Query: 313 AASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGNTDRAYEILD 372
             S+TI+I+ FCK   M+ A+  F +M  +G + D   YT LI+GF      D  YE+L 
Sbjct: 370 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 429

Query: 373 NMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNTVIR--LVCK 432
            M +KGH P   +Y  ++     ++  E    +  +M +    P ++ +N +++   V +
Sbjct: 430 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 489

Query: 433 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERGL 485
             E+  AV  W EM   G+ P  ++Y V++ G +S+G   EAC Y +EM+++G+
Sbjct: 490 NYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539

[Close]
BLAST of Lsi01G008660 vs. NCBI nr
Match: gi|659130244|ref|XP_008465066.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis melo])

HSP 1 Score: 1214.5 bits (3141), Expect = 0.0e+00
Identity = 599/643 (93.16%), Postives = 619/643 (96.27%), Query Frame = 1 

Query: 1   MHRFY-RTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISSQTSP----KHGGFGPIYLK 60
           MHRFY RTI VF+K+    KSNSPL    +KPHLSLSLISSQTSP    + G FGPI+LK
Sbjct: 1   MHRFYHRTIHVFSKQS--SKSNSPLIFLPKKPHLSLSLISSQTSPNGTPQRGWFGPIHLK 60

Query: 61  TTPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCG 120
           TTPH+STHD DADEFSVDVEKVYRILRKFHTRVPKLELALQESGV+LRSGLPERVLSRCG
Sbjct: 61  TTPHESTHDIDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVILRSGLPERVLSRCG 120

Query: 121 DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE 180
           DAGNLGYRFFVWASKQPGY+HSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE
Sbjct: 121 DAGNLGYRFFVWASKQPGYKHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE 180

Query: 181 VFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 240
           VFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM
Sbjct: 181 VFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 240

Query: 241 RIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 300
           R+RFNPSLRHFTSLLYGWCREGKI+EA+HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR
Sbjct: 241 RVRFNPSLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 300

Query: 301 DAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLI 360
           DAFDLL EM+KVNCGPNAASFTILIQAFCKMEKMDEAMRIF EMQG+GCEADVVTYTTLI
Sbjct: 301 DAFDLLAEMKKVNCGPNAASFTILIQAFCKMEKMDEAMRIFTEMQGSGCEADVVTYTTLI 360

Query: 361 SGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCL 420
           SGFCKWGNTDRAYEILD+MIQKGHDPSQ SYLCIMMAHEKKEELEECMEL+EEMRKIGCL
Sbjct: 361 SGFCKWGNTDRAYEILDDMIQKGHDPSQSSYLCIMMAHEKKEELEECMELIEEMRKIGCL 420

Query: 421 PDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDY 480
           PDLNIYNT+IRLVCKLG+LKEAVRLWGEMEAGGLNPGLDTYI+MVHGFLSQGCL EACDY
Sbjct: 421 PDLNIYNTMIRLVCKLGDLKEAVRLWGEMEAGGLNPGLDTYILMVHGFLSQGCLVEACDY 480

Query: 481 FKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCELNVNAWTIWIHAL 540
           FKEMVERGLLSAPQYGTLKELTNALLRA+KLEMAKNMWSCITTKGCELNVNAWTIWIHAL
Sbjct: 481 FKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCITTKGCELNVNAWTIWIHAL 540

Query: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQI 600
           FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL+HRQLAVEITEKVRKMAADRQI
Sbjct: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMAADRQI 600

Query: 601 TFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           TFKMYKRRGERDLKEK KAKIDGRK RARRR WSGVHKKTKTL
Sbjct: 601 TFKMYKRRGERDLKEKTKAKIDGRKRRARRRHWSGVHKKTKTL 641

[Close]
BLAST of Lsi01G008660 vs. NCBI nr
Match: gi|449463822|ref|XP_004149630.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis sativus])

HSP 1 Score: 1206.4 bits (3120), Expect = 0.0e+00
Identity = 591/643 (91.91%), Postives = 619/643 (96.27%), Query Frame = 1 

Query: 1   MHRFY-RTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISSQTSP----KHGGFGPIYLK 60
           MHRFY RTI VF+K+    KSNSPL    +KPHLSLSLISSQTSP    + GGFGPI+LK
Sbjct: 1   MHRFYHRTIHVFSKQS--SKSNSPLIFLPKKPHLSLSLISSQTSPNGTTQRGGFGPIHLK 60

Query: 61  TTPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCG 120
           TTPH+S HD DADEFSVDVEKVYRILRKFHTRVPKLELALQESGV++RSGLPERVLSRCG
Sbjct: 61  TTPHESAHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCG 120

Query: 121 DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE 180
           DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE
Sbjct: 121 DAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPE 180

Query: 181 VFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 240
           VFIVLMRRFAS RMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM
Sbjct: 181 VFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 240

Query: 241 RIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 300
           R+RFNP+LRHFTSLLYGWCREGKI+EA+HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR
Sbjct: 241 RVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 300

Query: 301 DAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLI 360
           DAFDLL EM+KVNCGPNAASFTILIQ+FCK EKMDEAMRIF EMQG+GCEADVVTYTTLI
Sbjct: 301 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 360

Query: 361 SGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCL 420
           SGFCKWGNTD+AYEILD+MIQKGHDPSQLSYLCIMMAHEKKEELEECMEL+EEMRKIGC+
Sbjct: 361 SGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCV 420

Query: 421 PDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDY 480
           PDLNIYNT+IRLVCKLG+LKEAVRLWGEM+AGGLNPGLDTYI+MVHGFLSQGCL EACDY
Sbjct: 421 PDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDY 480

Query: 481 FKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCELNVNAWTIWIHAL 540
           FKEMVERGLLSAPQYGTLKELTNALLRA+KLEMAKNMWSC+TTKGCELNV+AWTIWIHAL
Sbjct: 481 FKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHAL 540

Query: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQI 600
           FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL+HRQLAVEITEKVRKMAADRQI
Sbjct: 541 FSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMAADRQI 600

Query: 601 TFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           TFKMYKRRGERDLKEKIKAKIDGRK RARRR WSG+HKKTKTL
Sbjct: 601 TFKMYKRRGERDLKEKIKAKIDGRKRRARRRGWSGMHKKTKTL 641

[Close]
BLAST of Lsi01G008660 vs. NCBI nr
Match: gi|1009181918|ref|XP_015872431.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Ziziphus jujuba])

HSP 1 Score: 995.3 bits (2572), Expect = 4.7e-287
Identity = 475/591 (80.37%), Postives = 534/591 (90.36%), Query Frame = 1 

Query: 48  GFGPIYLKTTPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLP 107
           GFG + L+T+P     D   DEFS DVEK+Y IL++FH+RVPKLELALQESGVVLRSGL 
Sbjct: 63  GFGLLRLETSPVIRMDDQSCDEFSSDVEKIYGILKRFHSRVPKLELALQESGVVLRSGLT 122

Query: 108 ERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE 167
           ERVL+RCGDAG+LGYRFFVWASKQPGYR SYEVYKAMI+ LGKMRQFGAVWAL+EEMRKE
Sbjct: 123 ERVLNRCGDAGSLGYRFFVWASKQPGYRPSYEVYKAMIRVLGKMRQFGAVWALLEEMRKE 182

Query: 168 NPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKE 227
           NP ++TP+VF+VLMRRFASARMVKK++EVLDEMPKYGCEPDEY FGCLLDALCKNGSVK+
Sbjct: 183 NPQLITPDVFVVLMRRFASARMVKKSIEVLDEMPKYGCEPDEYAFGCLLDALCKNGSVKD 242

Query: 228 AASLFEDMRIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGG 287
           AASLFEDMRIRF PSL+HFTSLLYGWCREGK++EA+ VLVQ+KEAGFEPDIVVYNNLLGG
Sbjct: 243 AASLFEDMRIRFRPSLKHFTSLLYGWCREGKLMEAKFVLVQMKEAGFEPDIVVYNNLLGG 302

Query: 288 YAQAGKMRDAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEAD 347
           YAQAGKM DA+ LL+EM++  C PNA S+TILIQA C  EKM+EAMR+FVEMQ +G EAD
Sbjct: 303 YAQAGKMADAYGLLKEMKEKGCIPNATSYTILIQALCGREKMEEAMRVFVEMQRSGSEAD 362

Query: 348 VVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELME 407
           +VTYTTLISGFCKWG  ++ YEILD+MIQ+GH+P+Q+ YL IMMAHEKKEELEEC+ELME
Sbjct: 363 IVTYTTLISGFCKWGKIEKGYEILDSMIQRGHNPNQMVYLHIMMAHEKKEELEECLELME 422

Query: 408 EMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQG 467
           EMRKIGC+P+LNIYNTVIRL CKLGE+KE VR+W EMEA GL+PGLDT+++M+HGFL QG
Sbjct: 423 EMRKIGCIPELNIYNTVIRLACKLGEVKEGVRVWNEMEATGLSPGLDTFVIMIHGFLEQG 482

Query: 468 CLNEACDYFKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCELNVNA 527
           CL +ACDYFKEMV RGLLSAPQYGTLKEL N LLRA+KLEMAK++WSCI TKGCELNV+A
Sbjct: 483 CLVDACDYFKEMVGRGLLSAPQYGTLKELMNTLLRAEKLEMAKDVWSCIVTKGCELNVSA 542

Query: 528 WTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVR 587
           WTIWIHALFS GHVKEACSYCLDMMD DLMPQPDTFAKLMRGLKKLY+RQ+A EITEKVR
Sbjct: 543 WTIWIHALFSKGHVKEACSYCLDMMDLDLMPQPDTFAKLMRGLKKLYNRQIAAEITEKVR 602

Query: 588 KMAADRQITFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           KMAADRQITFKMYKRRGERDLKE++K K DGRK RARRRRW G   + K L
Sbjct: 603 KMAADRQITFKMYKRRGERDLKEQVKEKKDGRKRRARRRRWGGKTDRAKLL 653

[Close]
BLAST of Lsi01G008660 vs. NCBI nr
Match: gi|703139063|ref|XP_010106889.1| (hypothetical protein L484_012982 [Morus notabilis])

HSP 1 Score: 989.6 bits (2557), Expect = 2.6e-285
Identity = 478/635 (75.28%), Postives = 540/635 (85.04%), Query Frame = 1 

Query: 4   FYRTISVFNKELLLRKSNSPLPIFLRKPHLSLSLISSQTSPKHGGFGPIYLKTTPHDSTH 63
           FYR  S+F        S      +L  P    S   +  + +  GF P++L+  P  S  
Sbjct: 5   FYRARSLFTNRHFSLSSQPNTKPYLLSPQTQFSSTQNPHN-RATGFSPVHLEQNPVVSDD 64

Query: 64  DGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYR 123
           D   DEFS DVEK+YRILRKFH+RV KLELALQESGVVLRSGL ERVL RCGDAG+LGYR
Sbjct: 65  DETHDEFSGDVEKIYRILRKFHSRVSKLELALQESGVVLRSGLTERVLGRCGDAGSLGYR 124

Query: 124 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 183
           FFVWASKQPGYR SYEVYKAMI+ LGKMRQFGAVWAL+EEMRKENP ++TPE+F+VLMRR
Sbjct: 125 FFVWASKQPGYRPSYEVYKAMIRALGKMRQFGAVWALLEEMRKENPQLITPEIFVVLMRR 184

Query: 184 FASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPSL 243
           FASARMVKKAVEV DEMPKYGCEPDE+VFGCLLDALCKNGSVKEAASLFE+MR++F PSL
Sbjct: 185 FASARMVKKAVEVFDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEEMRVKFTPSL 244

Query: 244 RHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEE 303
           +HFTSLLYGWCREGK++EA+ VLVQ+KEAGFEPD+VVYNNLLGGYAQAGKM DA+DL++E
Sbjct: 245 KHFTSLLYGWCREGKLMEAKFVLVQMKEAGFEPDVVVYNNLLGGYAQAGKMADAYDLMKE 304

Query: 304 MRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGNGCEADVVTYTTLISGFCKWGN 363
           MR   C PNAAS+T+LIQA CK EKM+EAMR+FVEMQ +GC+ADV+TYTTLISGFCKWG 
Sbjct: 305 MRGKGCSPNAASYTVLIQALCKREKMEEAMRVFVEMQRSGCDADVMTYTTLISGFCKWGK 364

Query: 364 TDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEECMELMEEMRKIGCLPDLNIYNT 423
            +R YEILD+MIQ+G  P++ +YL IM+AHEKKEE EEC+EL+ EMRKIGC+PDL IYNT
Sbjct: 365 IERGYEILDSMIQRGFSPNETTYLHIMLAHEKKEEFEECVELIGEMRKIGCVPDLKIYNT 424

Query: 424 VIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLNEACDYFKEMVERG 483
           VIRL CKL E+KE VRLW E+EA GL+PGLDT++VM+HGFL QGCL EAC YFKEMVERG
Sbjct: 425 VIRLACKLREVKEGVRLWNEIEASGLSPGLDTFVVMIHGFLGQGCLIEACQYFKEMVERG 484

Query: 484 LLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCELNVNAWTIWIHALFSNGHVKE 543
           LLS PQYGTLKEL NALLRA KLEMAK++W+CI  KGCE+NV AWTIWIHALF NGHVKE
Sbjct: 485 LLSGPQYGTLKELLNALLRADKLEMAKDVWTCIVNKGCEINVYAWTIWIHALFKNGHVKE 544

Query: 544 ACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEITEKVRKMAADRQITFKMYKRR 603
           ACSYCLDMMDAD+MPQPDTFAKLMRGLKKLY+RQ+A EITEKVRKMA DRQ+TFKMYKRR
Sbjct: 545 ACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAEDRQMTFKMYKRR 604

Query: 604 GERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           GERDLKEK K K +GRK RARRRRW G H   K L
Sbjct: 605 GERDLKEKAKEKQNGRKRRARRRRWGGRHGSAKAL 638

[Close]
BLAST of Lsi01G008660 vs. NCBI nr
Match: gi|731441047|ref|XP_003635394.2| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Vitis vinifera])

HSP 1 Score: 980.7 bits (2534), Expect = 1.2e-282
Identity = 469/596 (78.69%), Postives = 529/596 (88.76%), Query Frame = 1 

Query: 43  SPKHGGFGPIYLKTTPHDSTHDGDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVVL 102
           S + GGFG + L++   + T+D + DEFS DVEKVYRILRKFH+RVPKLELALQESGV +
Sbjct: 80  SERRGGFGLVRLESNRENCTYDQNYDEFSADVEKVYRILRKFHSRVPKLELALQESGVAV 139

Query: 103 RSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIE 162
           RSGL ERVL+RCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIK LGKMRQFGAVWALIE
Sbjct: 140 RSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIE 199

Query: 163 EMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN 222
           EMR+ENP  ++P VF+VLMRRFASARMVKKA+EVLDEMPKYGCEPDE+VFGCLLDALCKN
Sbjct: 200 EMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKN 259

Query: 223 GSVKEAASLFEDMRIRFNPSLRHFTSLLYGWCREGKILEARHVLVQIKEAGFEPDIVVYN 282
           GSVKEAASLFEDMRIRF P+L+HFTSLLYGWCREGK++EA++VLVQI+EAGFEPDIVVYN
Sbjct: 260 GSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYN 319

Query: 283 NLLGGYAQAGKMRDAFDLLEEMRKVNCGPNAASFTILIQAFCKMEKMDEAMRIFVEMQGN 342
           NLL GYA AGKM DA+DLL+EMR+  C PN  SFT LIQA C  +KM+EAMR+F EMQ  
Sbjct: 320 NLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC 379

Query: 343 GCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEELEEC 402
           GC AD VTYTTLISGFCKWG   + YE+LDNMIQ+GH P+ ++YL IM AHEKKEELEEC
Sbjct: 380 GCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEEC 439

Query: 403 MELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHG 462
           +ELMEEMRKIGC PDLNIYN VIRL CKLGE+KE VR+W EMEA GL+PGLDT+++M+HG
Sbjct: 440 IELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHG 499

Query: 463 FLSQGCLNEACDYFKEMVERGLLSAPQYGTLKELTNALLRAQKLEMAKNMWSCITTKGCE 522
           FLSQ CL EAC++FKEMV RGLLSAPQYGTLKEL N+LLRA+KLEM+K++WSCI TKGC+
Sbjct: 500 FLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCD 559

Query: 523 LNVNAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYHRQLAVEI 582
           LNV AWTIWIHALFSNGHVKEACSYCLDMMDA +MPQPDTFAKLMRGL+KLY+RQ+A EI
Sbjct: 560 LNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEI 619

Query: 583 TEKVRKMAADRQITFKMYKRRGERDLKEKIKAKIDGRKSRARRRRWSGVHKKTKTL 639
           TEKVRKMAA+R++TFKMYKRRGER+LKEKIK   DGRK RARRRRW G H +   L
Sbjct: 620 TEKVRKMAAEREMTFKMYKRRGERNLKEKIKEAKDGRKRRARRRRWGGGHGRANIL 675

The following BLAST results are available for this feature:
BLAST of Lsi01G008660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP447_ARATH6.3e-23964.72Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
PP275_ARATH6.9e-23863.30Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN... [more]
PP129_ARATH2.1e-6933.11Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
PP112_ARATH2.2e-6631.50Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
PP294_ARATH1.9e-6232.61Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
BLAST of Lsi01G008660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPG0_CUCSA0.0e+0091.91Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011710 PE=4 SV=1[more]
W9SJT5_9ROSA1.8e-28575.28Uncharacterized protein OS=Morus notabilis GN=L484_012982 PE=4 SV=1[more]
F6I7J1_VITVI8.4e-28378.69Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0525g00040 PE=4 SV=... [more]
A5ANV6_VITVI2.1e-27380.39Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021787 PE=4 SV=1[more]
A0A067KAS4_JATCU1.0e-27274.62Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12579 PE=4 SV=1[more]
BLAST of Lsi01G008660 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65820.13.5e-24064.72 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G49730.13.9e-23963.30 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G77360.11.2e-7033.11 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G71060.11.2e-6731.50 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G62540.11.1e-6332.61 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Lsi01G008660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130244|ref|XP_008465066.1|0.0e+0093.16PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis m... [more]
gi|449463822|ref|XP_004149630.1|0.0e+0091.91PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis s... [more]
gi|1009181918|ref|XP_015872431.1|4.7e-28780.37PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Zizip... [more]
gi|703139063|ref|XP_010106889.1|2.6e-28575.28hypothetical protein L484_012982 [Morus notabilis][more]
gi|731441047|ref|XP_003635394.2|1.2e-28278.69PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Vitis... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G008660.1Lsi01G008660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 527..553
score: 0.061coord: 140..168
score: 0.54coord: 385..414
score: 0.016coord: 245..274
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 204..236
score: 6.0E-10coord: 342..374
score: 3.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 416..463
score: 6.0E-10coord: 276..325
score: 7.8
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 210..236
score: 9.2E-6coord: 349..382
score: 1.4E-9coord: 279..313
score: 4.0E-8coord: 420..451
score: 2.8E-6coord: 455..484
score: 4.7E-6coord: 315..348
score: 3.4E-8coord: 246..278
score: 3.2E-5coord: 177..209
score: 8.7E-7coord: 527..558
score: 6.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 417..451
score: 11.915coord: 312..346
score: 11.915coord: 137..171
score: 7.498coord: 208..238
score: 9.909coord: 242..276
score: 10.183coord: 489..523
score: 5.59coord: 347..381
score: 13.384coord: 173..207
score: 10.15coord: 524..558
score: 8.232coord: 382..416
score: 9.175coord: 452..486
score: 9.602coord: 277..311
score: 1
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 277..592
score: 1.6
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 216..440
score: 1.
NoneNo IPR availableunknownCoilCoilcoord: 389..412
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 81..600
score:
NoneNo IPR availablePANTHERPTHR24015:SF710SUBFAMILY NOT NAMEDcoord: 81..600
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G008660CmaCh03G008870Cucurbita maxima (Rimu)cmalsiB597
Lsi01G008660CmoCh03G009300Cucurbita moschata (Rifu)cmolsiB582
Lsi01G008660CmoCh07G006340Cucurbita moschata (Rifu)cmolsiB774
Lsi01G008660Cla014054Watermelon (97103) v1lsiwmB144
Lsi01G008660ClCG01G017840Watermelon (Charleston Gray)lsiwcgB127
Lsi01G008660Cla97C01G017040Watermelon (97103) v2lsiwmbB115
Lsi01G008660Carg00767Silver-seed gourdcarlsiB364
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G008660Silver-seed gourdcarlsiB001
Lsi01G008660Silver-seed gourdcarlsiB340
Lsi01G008660Silver-seed gourdcarlsiB707
Lsi01G008660Cucumber (Chinese Long) v3cuclsiB113
Lsi01G008660Cucumber (Chinese Long) v3cuclsiB283
Lsi01G008660Cucumber (Chinese Long) v3cuclsiB462
Lsi01G008660Watermelon (97103) v2lsiwmbB150
Lsi01G008660Wax gourdlsiwgoB156
Lsi01G008660Wax gourdlsiwgoB180
Lsi01G008660Wax gourdlsiwgoB199
Lsi01G008660Bottle gourd (USVL1VR-Ls)lsilsiB087
Lsi01G008660Bottle gourd (USVL1VR-Ls)lsilsiB076
Lsi01G008660Cucumber (Gy14) v1cgylsiB125
Lsi01G008660Cucumber (Gy14) v1cgylsiB567
Lsi01G008660Cucumber (Gy14) v1cgylsiB634
Lsi01G008660Cucurbita maxima (Rimu)cmalsiB016
Lsi01G008660Cucurbita maxima (Rimu)cmalsiB719
Lsi01G008660Cucurbita maxima (Rimu)cmalsiB640
Lsi01G008660Cucurbita maxima (Rimu)cmalsiB786
Lsi01G008660Cucurbita moschata (Rifu)cmolsiB004
Lsi01G008660Cucurbita moschata (Rifu)cmolsiB154
Lsi01G008660Cucurbita moschata (Rifu)cmolsiB392
Lsi01G008660Cucurbita moschata (Rifu)cmolsiB709
Lsi01G008660Cucurbita moschata (Rifu)cmolsiB627
Lsi01G008660Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G008660Cucurbita pepo (Zucchini)cpelsiB325
Lsi01G008660Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G008660Wild cucumber (PI 183967)cpilsiB103
Lsi01G008660Wild cucumber (PI 183967)cpilsiB261
Lsi01G008660Wild cucumber (PI 183967)cpilsiB439
Lsi01G008660Cucumber (Chinese Long) v2culsiB105
Lsi01G008660Cucumber (Chinese Long) v2culsiB262
Lsi01G008660Cucumber (Chinese Long) v2culsiB434
Lsi01G008660Melon (DHL92) v3.5.1lsimeB135
Lsi01G008660Melon (DHL92) v3.5.1lsimeB156
Lsi01G008660Watermelon (Charleston Gray)lsiwcgB153
Lsi01G008660Watermelon (97103) v1lsiwmB133
Lsi01G008660Cucumber (Gy14) v2cgyblsiB095
Lsi01G008660Cucumber (Gy14) v2cgyblsiB246
Lsi01G008660Cucumber (Gy14) v2cgyblsiB398
Lsi01G008660Melon (DHL92) v3.6.1lsimedB142
Lsi01G008660Melon (DHL92) v3.6.1lsimedB153
Lsi01G008660Melon (DHL92) v3.6.1lsimedB163