Lsi01G008430 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G008430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	chr01 : 6741238 .. 6743355 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCTCATCGGCCAAATGGTTATCCGAACTAGTAAGGCTAAATTTAATTTTGGATGCTTATTGATTTTAATATGTTGCTAATATATATTTGGAATTGATTGAAATGAATGTTTTGACTTTTAGGAAATGATGGAGTGTTCATATGAATACGAGACGAACAATTACCCTCATGATTACACACAATATCATGAGCTGAATTTTCCGGCAAGCGAAAAGGTCAATACTTTTAGCTCTTCCCAGTTGATTTCATTTGGGGATTATTCAGCTGAAATTGAGAATAAGTTTGATTATGGGAGAATTAATTGGGGTGGTGTGGACAATATAGATAAGGATTTCTCCTTCTTAATATCGAATCAAAATGGAAATTTAATTGAATTTGAAGAAGAAGGGCATGAAATTAAGAAGTGTGCAACAATAATGGGTCCAAATAATTCTGGAAATGGTAAAGATCATGTTATAGCTGAGAGAAGACGAAGAGAGAAGCTTAGCCAAAACTTTCTTGCTCTTTCAGCTCTCATCCCCGGCTTAAACAAGGTAAAAACTTCCCTCATAATATTCATTTCTTTTTATTTATTTATTAATTAGGGTTAGTATTTGTGACAAGTGATGTACTTTTCGAATTTTTTACATAGATATGATAATAAGTCTTCTATAAGATATTTTACTTTTTATTTCACCGGAAATATCTCACGAGAAAAATCTCGTAGAGATGATAGGAGATTAGTAGAACTTCCAAAGAAAAAAATGGTTGTTTTCAAATATAAAAAAGTGAACCAAAATATTTACAAATATAGTAAAATTTCACTGTCTATATGTGATATATCGCGATAGACTGCGATAAACTACTATCTGTATTTATCTGTAGTCTATCGCAACACAGAGACTGTGATAAACAGTGAAATTTTGCTATATTTGTAAATATTTTCAACATTTTGTCATTTAAAATCATTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATATGGAGCTTCCAATTTCTTATCCCAATTGCTTAGATCAAAAAAGGGTTAATGTTACATTTTTATTTCTATGTGCTTTAATATAAGGTTTTAAGTGAAATTGGTTTTTATACTCTTAACGATTTCATTTTCTATGTTAAATTCTTGGATTAAAAGAAAAATATAGGAATATGAAATAATATATAATCATTAAACTTTTAAAAAAAGGATCTCTAAATAGATACGAAACACAATATATTTGGTGAAAGAGGGACAAAGCTTCGGTGCTTGGGGGAGCAATCAAGTATGTGAAAGAGCTTCAAGAACGTCTCAAATGGGCTGAGGAAGAAGCAGCAGATCAGAAGAGAGTACTTAAATCCGTCGTGTTTGCAAAAAGAATTGATCTTGACCCCGACACCGACAACAAAAACTCTTTACCAGTCGAGAACGGCGGTGGATTTTCGTTCCGACCAGTTCCCAAGATAGAAACAAGAGTTTTGGGGAAGGATGTTTTGATAAGAATTCATTGCAAGAAACACAAAGGATGTTTTACAAACATATTATGCCAAATAGAGAAGCTCAACCTTACAATTGTGAATAGCTGCGCTTTGCCATTTGGCCACTCCACACTTGATATTACCATTGTTGCGAAGGTAAAAAAAAAAAAAACCTTTCTCTATTATATTATTATTATTATTTTGGATAAATTCGATTAATTAATATTGGTTACTTTGTTATAGACGGAGGCTGGTTACTGCATGACAGCGATGAATCTTGGGAAGAAGCTAAGAGAGACTTTGGTCGAATTCATATAG

mRNA sequence

ATGGAAATCTCATCGGCCAAATGGTTATCCGAACTAGAAATGATGGAGTGTTCATATGAATACGAGACGAACAATTACCCTCATGATTACACACAATATCATGAGCTGAATTTTCCGGCAAGCGAAAAGGTCAATACTTTTAGCTCTTCCCAGTTGATTTCATTTGGGGATTATTCAGCTGAAATTGAGAATAAGTTTGATTATGGGAGAATTAATTGGGGTGGTGTGGACAATATAGATAAGGATTTCTCCTTCTTAATATCGAATCAAAATGGAAATTTAATTGAATTTGAAGAAGAAGGGCATGAAATTAAGAAGTGTGCAACAATAATGGGTCCAAATAATTCTGGAAATGGTAAAGATCATGTTATAGCTGAGAGAAGACGAAGAGAGAAGCTTAGCCAAAACTTTCTTGCTCTTTCAGCTCTCATCCCCGGCTTAAACAAGAGGGACAAAGCTTCGGTGCTTGGGGGAGCAATCAAGTATGTGAAAGAGCTTCAAGAACGTCTCAAATGGGCTGAGGAAGAAGCAGCAGATCAGAAGAGAGTACTTAAATCCGTCGTGTTTGCAAAAAGAATTGATCTTGACCCCGACACCGACAACAAAAACTCTTTACCAGTCGAGAACGGCGGTGGATTTTCGTTCCGACCAGTTCCCAAGATAGAAACAAGAGTTTTGGGGAAGGATGTTTTGATAAGAATTCATTGCAAGAAACACAAAGGATGTTTTACAAACATATTATGCCAAATAGAGAAGCTCAACCTTACAATTGTGAATAGCTGCGCTTTGCCATTTGGCCACTCCACACTTGATATTACCATTGTTGCGAAGACGGAGGCTGGTTACTGCATGACAGCGATGAATCTTGGGAAGAAGCTAAGAGAGACTTTGGTCGAATTCATATAG

Coding sequence (CDS)

ATGGAAATCTCATCGGCCAAATGGTTATCCGAACTAGAAATGATGGAGTGTTCATATGAATACGAGACGAACAATTACCCTCATGATTACACACAATATCATGAGCTGAATTTTCCGGCAAGCGAAAAGGTCAATACTTTTAGCTCTTCCCAGTTGATTTCATTTGGGGATTATTCAGCTGAAATTGAGAATAAGTTTGATTATGGGAGAATTAATTGGGGTGGTGTGGACAATATAGATAAGGATTTCTCCTTCTTAATATCGAATCAAAATGGAAATTTAATTGAATTTGAAGAAGAAGGGCATGAAATTAAGAAGTGTGCAACAATAATGGGTCCAAATAATTCTGGAAATGGTAAAGATCATGTTATAGCTGAGAGAAGACGAAGAGAGAAGCTTAGCCAAAACTTTCTTGCTCTTTCAGCTCTCATCCCCGGCTTAAACAAGAGGGACAAAGCTTCGGTGCTTGGGGGAGCAATCAAGTATGTGAAAGAGCTTCAAGAACGTCTCAAATGGGCTGAGGAAGAAGCAGCAGATCAGAAGAGAGTACTTAAATCCGTCGTGTTTGCAAAAAGAATTGATCTTGACCCCGACACCGACAACAAAAACTCTTTACCAGTCGAGAACGGCGGTGGATTTTCGTTCCGACCAGTTCCCAAGATAGAAACAAGAGTTTTGGGGAAGGATGTTTTGATAAGAATTCATTGCAAGAAACACAAAGGATGTTTTACAAACATATTATGCCAAATAGAGAAGCTCAACCTTACAATTGTGAATAGCTGCGCTTTGCCATTTGGCCACTCCACACTTGATATTACCATTGTTGCGAAGACGGAGGCTGGTTACTGCATGACAGCGATGAATCTTGGGAAGAAGCTAAGAGAGACTTTGGTCGAATTCATATAG

Protein sequence

MEISSAKWLSELEMMECSYEYETNNYPHDYTQYHELNFPASEKVNTFSSSQLISFGDYSAEIENKFDYGRINWGGVDNIDKDFSFLISNQNGNLIEFEEEGHEIKKCATIMGPNNSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAGYCMTAMNLGKKLRETLVEFI

Homology

[Close]

BLAST of Lsi01G008430 vs. Swiss-Prot
Match: BH025_ARATH (Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 2.8e-40
Identity = 129/341 (37.83%), Postives = 184/341 (53.96%), Query Frame = 1


Query: 1   MEISSAKWLSELEMMECSY--EYETNN-----------YPHDYT-----QYHEL------ 60
           M I S +W SE E+ E S   ++  N+           +PH +T      Y +L      
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPP 60

Query: 61  ------------NFPASEK---VNTFSSSQLISFGDY-SAEIENKFDYGRINWGGVDNID 120
                       + P + K   ++  SSS+++SF DY S ++E+++    +N        
Sbjct: 61  KILETTYISPSSHLPPNSKPHHIHRHSSSRILSFEDYGSNDMEHEYSPTYLN-------- 120

Query: 121 KDFSFLISNQNGNLIEFEEEGHEIKKCATIMGPNNSGNGKDHVIAERRRREKLSQNFLAL 180
             FS  +  Q     + +E   +  K A     N S N +DH+IAER+RREKL+Q F+AL
Sbjct: 121 SIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQS-NAQDHIIAERKRREKLTQRFVAL 180

Query: 181 SALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTD 240
           SAL+PGL K DKASVLG A+K++K LQER+   EE+   ++R L+S+V  K+  L  D D
Sbjct: 181 SALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ--KKERRLESMVLVKKSKLILD-D 240

Query: 241 NKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNS 300
           N  S       GFS   +P+IE R   +DVLI+I C+K KG    I+ +IEKL++ I NS
Sbjct: 241 NNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNS 300

Query: 301 CALPFGHSTLDITIVAKTEAGYCMTAMNLGKKLRETLVEFI 302
             L FG  TLDITI+AK E+ + MT M++ K LR  L  FI
Sbjct: 301 SVLNFG-PTLDITIIAKKESDFDMTLMDVVKSLRSALSNFI 328

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BLAST of Lsi01G008430 vs. Swiss-Prot
Match: BH020_ARATH (Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.5e-36
Identity = 99/271 (36.53%), Postives = 151/271 (55.72%), Query Frame = 1


Query: 39  PASEKVNTFSSSQLISFGDYSAEIENKFDYGRINWGGVDNIDKDFSFLISNQNGNLIEFE 98
           P+S   +   +SQ+ISFG    +               + ++   +F  SNQ   +   +
Sbjct: 69  PSSSSSSGSRTSQVISFGSPDTK--------------TNPVETSLNF--SNQ---VSMDQ 128

Query: 99  EEGHEIKKCATIMGPNNSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGG 158
           + G + K C    G       K+HV+AER+RR+KL++  +ALSAL+PGL K DKA+VL  
Sbjct: 129 KVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLED 188

Query: 159 AIKYVKELQERLKWAEEEAADQKRVLKSVVFAKR--IDLDPDTDNKNSL-----PVENGG 218
           AIK++K+LQER+K  EEE    K++ +S++  KR  + LD D+ + +S      P+ +  
Sbjct: 189 AIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSS 248

Query: 219 ---GFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHS 278
                  + +P IE RV  +D+LIR+HC+K+KGC   IL  +EK  L +VNS  LPFG+S
Sbjct: 249 DEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNS 308

Query: 279 TLDITIVAKTEAGYCMTAMNLGKKLRETLVE 300
           TL ITI+ K +  +      + K +R  L E
Sbjct: 309 TLVITILTKMDNKFSRPVEEVVKNIRVALAE 320

[Close]

BLAST of Lsi01G008430 vs. Swiss-Prot
Match: BH018_ARATH (Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.8e-34
Identity = 86/181 (47.51%), Postives = 120/181 (66.30%), Query Frame = 1


Query: 115 NSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAE 174
           +  N +DH++AER+RREKL+Q F+ALSALIPGL K DKASVLG AIK++K LQE +K  E
Sbjct: 120 SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYE 179

Query: 175 EEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPVENGG--GFSFRPVPKIETRVLGKDVLI 234
           E+   +++ ++SVV  K+  L  D +++ S    + G    S   +P+IE RV GKDVLI
Sbjct: 180 EQ--KKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLI 239

Query: 235 RIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAGYCMTAMNLGKK 294
           +I C+K KG    I+ +IEKL L+I NS  LPFG  T DI+I+A+    + M   ++ K 
Sbjct: 240 KILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFG-PTFDISIIAQKNNNFDMKIEDVVKN 297

[Close]

BLAST of Lsi01G008430 vs. Swiss-Prot
Match: BH019_ARATH (Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.3e-32
Identity = 82/203 (40.39%), Postives = 124/203 (61.08%), Query Frame = 1


Query: 101 GHEIKKCATIMGPNNSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAI 160
           G   K+     G  +    K+HV+AER+RREKLS+ F+ALSAL+PGL K DK ++L  AI
Sbjct: 99  GRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAI 158

Query: 161 KYVKELQERLKWAEEEAADQKRVLKSVVFAKR----IDLDPDTDNKNSLPVENGGGFSFR 220
             +K+LQE+L+  +EE  +  R ++S++  K+     D +P+     S+ +E       +
Sbjct: 159 SRMKQLQEQLRTLKEE-KEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFD-----Q 218

Query: 221 PVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVA 280
            +P+IE ++   D+LIRI C+K KGC  NIL  IE   L I NS  LPFG STLDIT++A
Sbjct: 219 ALPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLA 278

Query: 281 KTEAGYCMTAM-NLGKKLRETLV 299
           + +  + M+ + +L + LR  +V
Sbjct: 279 QMDKDFSMSILKDLVRNLRLAMV 295

[Close]

BLAST of Lsi01G008430 vs. Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-14
Identity = 49/161 (30.43%), Postives = 85/161 (52.80%), Query Frame = 1


Query: 121 DHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQ 180
           +HV AER+RREKL+Q F AL +++P ++K DKAS+LG AI Y+KELQE++K  E+E    
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE---- 454

Query: 181 KRVLKSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHK 240
                      R+  D      N++ VE          P+++ + + ++V++R+      
Sbjct: 455 -----------RVGTDKSLSESNTITVEES--------PEVDIQAMNEEVVVRVISPLDS 514

Query: 241 GCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAG 282
              + I+  +   N++++ +  L     T+  T V K+  G
Sbjct: 515 HPASRIIQAMRNSNVSLMEA-KLSLAEDTMFHTFVIKSNNG 531

[Close]

BLAST of Lsi01G008430 vs. TrEMBL
Match: A0A0A0KLM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497120 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 7.9e-90
Identity = 196/316 (62.03%), Postives = 219/316 (69.30%), Query Frame = 1


Query: 14  MMECSYEYET-NNYPHDYTQYHELNFPASEKVNTF-SSSQLISFGDYSAEIEN-KFDYGR 73
           MMECSYEYE    YPHDYT   ELNFPA EKVN   SS QLISFGDYS EIEN KFD   
Sbjct: 1   MMECSYEYERMKKYPHDYT-LDELNFPAMEKVNNSRSSGQLISFGDYSGEIENYKFD--- 60

Query: 74  INWGGVDNIDKDFSFLISNQNGNLIEFEEEGHEIKK--CATIM-----GPNNSGNGKDHV 133
                                GNLI FEEE HEIKK  C+TI+       N++ N  +HV
Sbjct: 61  -------------------DYGNLIGFEEEEHEIKKDYCSTIIMGQLPNHNHNNNNSEHV 120

Query: 134 IAERRRREKLSQNFLALSALIPGL------------------NKRDKASVLGGAIKYVKE 193
           IAERRRREK+ QNF+ALSALIPGL                   K DKASVLGGAIK+VKE
Sbjct: 121 IAERRRREKIRQNFIALSALIPGLIKDHDGHTVLQVEVSVEGLKADKASVLGGAIKFVKE 180

Query: 194 LQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPKIETRV 253
           LQERLKWAEE+  +QKRV+KSVVF K I+LD D DN+     ENGG FS R VP IETRV
Sbjct: 181 LQERLKWAEEKEKEQKRVIKSVVFVKTINLDSDFDNETFSLDENGGRFSVRSVPTIETRV 240

Query: 254 LGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAGYCMT 302
           L KDVL+RIHCKKHKGC+T+I+ +IEKL LTIVNSC  PFG S LDITI+A+ EAG+CMT
Sbjct: 241 LEKDVLVRIHCKKHKGCYTSIVSEIEKLKLTIVNSCVFPFGQSRLDITIIAEMEAGFCMT 293

[Close]

BLAST of Lsi01G008430 vs. TrEMBL
Match: W9RQB0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016091 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.4e-48
Identity = 130/283 (45.94%), Postives = 173/283 (61.13%), Query Frame = 1


Query: 28  HDYTQYHELNFPASEKVNTFSSSQLISFGDY--SAEIENKFDYGRINWGGVD-------- 87
           +D   YH+     S K  + SSSQ+ISF  Y  SA    +  Y  ++   V         
Sbjct: 103 NDNYHYHK----TSAKAASSSSSQIISFEKYASSAATTPEKYYDNLDQSPVKQPKDEPAG 162

Query: 88  NIDKDFSFLISNQNGNLIEFEEEGHEIKKCATIMGPNNSG-NGKDHVIAERRRREKLSQN 147
           + DK   F  S  + N     + G  I++       + S  + +DHVIAERRRREKL+Q 
Sbjct: 163 STDKYMIFQSSYHDRNENFSPKLGQVIREKRPAAAMSRSPLHAQDHVIAERRRREKLNQR 222

Query: 148 FLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLD 207
           ++ALSA++PGL K DKASVLG AI Y+K LQER+   EE+AA  K+ ++SVVF KR  L 
Sbjct: 223 YIALSAVVPGLKKMDKASVLGDAITYIKTLQERVSILEEQAA--KKTVESVVFVKRSHLS 282

Query: 208 PDTDNKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLT 267
            D +  +S   EN    S +P+P+IE RV GKDVLIRIHC+K KGC +NILC+IEKL+LT
Sbjct: 283 ADDEISSS--DENFDSSSDQPLPEIEARVSGKDVLIRIHCEKQKGCLSNILCEIEKLHLT 342

Query: 268 IVNSCALPFGHSTLDITIVAKTEAGYCMTAMNLGKKLRETLVE 300
           IVNS  LPFG ST  ITIVA+ +  Y M A +L + +R+ L++
Sbjct: 343 IVNSSVLPFGGSTTHITIVAQMDVEYSMNAKDLVRNIRQALLK 377

[Close]

BLAST of Lsi01G008430 vs. TrEMBL
Match: A0A0A0KG27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497110 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.5e-48
Identity = 140/342 (40.94%), Postives = 190/342 (55.56%), Query Frame = 1


Query: 1   MEISSAKWLSELEM------------MECSYEYETNNYP----HDYTQYHELN-----FP 60
           MEISSAKWLSE+E+             EC+ E E +++       YT + +L+      P
Sbjct: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLE-ELSSFQTFSDESYTSHVDLDNSSVQTP 60

Query: 61  A------------------SEKVNTFSSSQLISFGDYSAEIENKFDYGRINWGGVDNIDK 120
           A                  S    + SSSQ+ISFG+    IE      + ++   +N +K
Sbjct: 61  AAPPPAKQARTSSGSSRRISSMATSSSSSQIISFGN----IEMSPMVAQPSYDNNNNNNK 120

Query: 121 DFSFLISNQNGNLIEFEEEGHEIKKCATIMGPNNSGN--GKDHVIAERRRREKLSQNFLA 180
             ++  S    + +  +      +  A  M  NN      +DHV+AER+RREKLSQ F+A
Sbjct: 121 TSNYYCSPNKNHGVGIK------RSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVA 180

Query: 181 LSALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDT 240
           LSALIP L K DKAS+LG AI Y+K+LQERLK A E+AA  K  ++SVVF  + D     
Sbjct: 181 LSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQAA--KATVESVVFVNKSDDASTI 240

Query: 241 DNKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVN 300
              +    EN    S   +P +E RV GKDVL+RIH KK KGC +NIL QIEKLNLT++N
Sbjct: 241 IASDDSSEENSSSSSDGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLN 300

Query: 301 SCALPFGHSTLDITIVAKTEAGYCMTAMNLGKKLRETLVEFI 302
           S ALPFG+  LDITI+A+ +  + MT   L +KLR+  +EF+
Sbjct: 301 SSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM 329

[Close]

BLAST of Lsi01G008430 vs. TrEMBL
Match: A0A0D2PRC4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G087600 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.7e-47
Identity = 128/321 (39.88%), Postives = 190/321 (59.19%), Query Frame = 1


Query: 1   MEISSAKWLSELEMMECSY--EYETNNYPHDYTQYHELNFPASEKVNTFSSSQLISFGDY 60
           MEI+S KWLS+LEM + +   +Y+  N P DY+ +H+ NF +      +SS+   + G+ 
Sbjct: 1   MEIASGKWLSQLEMEDPTLFPQYQMIN-PIDYS-FHDFNFHSEN----YSSNPYYTIGNS 60

Query: 61  SAEIENKFDYGRI--------NWGGV---DNIDKDFSFLISNQNGNLIEFEEEGHEIKKC 120
             E   + D  +         +W      +NI        S+ + +LI F+         
Sbjct: 61  FIETSQEVDDFKRQMKQLKTNSWNSCITENNIPPPPKPSSSSSSSHLISFDNSNSYYAVD 120

Query: 121 ATIMGPNNSGN-------GKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAI 180
             +   N  G+        +DHV+AER+RREKLSQ+F++LSALIPGL K DKAS+LG AI
Sbjct: 121 YDVKPKNEVGSFTRIPLHAQDHVLAERKRREKLSQSFISLSALIPGLKKTDKASILGDAI 180

Query: 181 KYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPK 240
            Y+K+LQ+R+   EE+ A  K+ ++SV+F ++  +  D +  +S    +G   +  P P+
Sbjct: 181 TYLKKLQDRVNVLEEQVA--KKTMESVIFVRKTQIYADDETSSSDESVHGQSNN-NPFPE 240

Query: 241 IETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEA 300
           IE RV  KDVLIRIHCK +KGC +NI+ ++EKL+L ++NS  LPFG +TLDITI A+ EA
Sbjct: 241 IEARVSDKDVLIRIHCKNNKGCISNIINEVEKLHLFVLNSHVLPFGQATLDITITAQMEA 300

Query: 301 GYCMTAMNLGKKLRETLVEFI 302
            + MT  +L K LR  L++FI
Sbjct: 301 EFSMTVKDLVKSLRLALLKFI 312

[Close]

BLAST of Lsi01G008430 vs. TrEMBL
Match: A0A0B0PCU7_GOSAR (Transcription factor bHLH19-like protein OS=Gossypium arboreum GN=F383_28381 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.2e-47
Identity = 129/321 (40.19%), Postives = 192/321 (59.81%), Query Frame = 1


Query: 1   MEISSAKWLSELEMMECSY--EYETNNYPHDYTQYHELNFPASEKVNTFSSSQLISFGDY 60
           MEI+S KWLS+LEM + +   +Y+  N P DY+ +H++NF +      +S++   + G+ 
Sbjct: 1   MEIASGKWLSQLEMEDPTLFPQYQVIN-PIDYS-FHDINFHSEN----YSTNPYYTIGNS 60

Query: 61  SAEIENKFDYGRI--------NWGGV---DNIDKDFSFLISNQNGNLIEFEEEGHEIKKC 120
             E  ++ D  +         +W      +NI        S+ + +LI F+         
Sbjct: 61  FIEASHEVDDFKRPMKQLKTNSWNSCITENNIPPPPKPSSSSSSSHLISFDNSNSYYAVD 120

Query: 121 ATIMGPNNSGN-------GKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAI 180
             +   N  G+        +DHV+AER+RR KLSQ+F++LSALIPGL K DKASVLG AI
Sbjct: 121 YDVKPKNEVGSFTRTPLHAQDHVLAERKRRAKLSQSFISLSALIPGLKKTDKASVLGDAI 180

Query: 181 KYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPK 240
            Y+K+LQ+R+   EE+ A  K+ ++S +F ++  +  D +  +S   E+  G S  P P+
Sbjct: 181 TYLKKLQDRVNVLEEQVA--KKTMESGIFVRKTQIYADDETSSS--DESVHGQSNNPFPE 240

Query: 241 IETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEA 300
           IE RV  KDVLIRIHCK +KGC +NI+ ++EKL+L ++NS  LPFG +TLDITI A+ EA
Sbjct: 241 IEARVSDKDVLIRIHCKHNKGCISNIINEVEKLHLFVLNSHVLPFGQATLDITITAQMEA 300

Query: 301 GYCMTAMNLGKKLRETLVEFI 302
            + MTA +L K LR  L++FI
Sbjct: 301 EFSMTAKDLVKSLRLALLKFI 311

[Close]

BLAST of Lsi01G008430 vs. TAIR10
Match: AT4G37850.1 (AT4G37850.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-41
Identity = 129/341 (37.83%), Postives = 184/341 (53.96%), Query Frame = 1


Query: 1   MEISSAKWLSELEMMECSY--EYETNN-----------YPHDYT-----QYHEL------ 60
           M I S +W SE E+ E S   ++  N+           +PH +T      Y +L      
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPP 60

Query: 61  ------------NFPASEK---VNTFSSSQLISFGDY-SAEIENKFDYGRINWGGVDNID 120
                       + P + K   ++  SSS+++SF DY S ++E+++    +N        
Sbjct: 61  KILETTYISPSSHLPPNSKPHHIHRHSSSRILSFEDYGSNDMEHEYSPTYLN-------- 120

Query: 121 KDFSFLISNQNGNLIEFEEEGHEIKKCATIMGPNNSGNGKDHVIAERRRREKLSQNFLAL 180
             FS  +  Q     + +E   +  K A     N S N +DH+IAER+RREKL+Q F+AL
Sbjct: 121 SIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQS-NAQDHIIAERKRREKLTQRFVAL 180

Query: 181 SALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTD 240
           SAL+PGL K DKASVLG A+K++K LQER+   EE+   ++R L+S+V  K+  L  D D
Sbjct: 181 SALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ--KKERRLESMVLVKKSKLILD-D 240

Query: 241 NKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNS 300
           N  S       GFS   +P+IE R   +DVLI+I C+K KG    I+ +IEKL++ I NS
Sbjct: 241 NNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNS 300

Query: 301 CALPFGHSTLDITIVAKTEAGYCMTAMNLGKKLRETLVEFI 302
             L FG  TLDITI+AK E+ + MT M++ K LR  L  FI
Sbjct: 301 SVLNFG-PTLDITIIAKKESDFDMTLMDVVKSLRSALSNFI 328

[Close]

BLAST of Lsi01G008430 vs. TAIR10
Match: AT2G22770.1 (AT2G22770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-37
Identity = 99/271 (36.53%), Postives = 151/271 (55.72%), Query Frame = 1


Query: 39  PASEKVNTFSSSQLISFGDYSAEIENKFDYGRINWGGVDNIDKDFSFLISNQNGNLIEFE 98
           P+S   +   +SQ+ISFG    +               + ++   +F  SNQ   +   +
Sbjct: 69  PSSSSSSGSRTSQVISFGSPDTK--------------TNPVETSLNF--SNQ---VSMDQ 128

Query: 99  EEGHEIKKCATIMGPNNSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGG 158
           + G + K C    G       K+HV+AER+RR+KL++  +ALSAL+PGL K DKA+VL  
Sbjct: 129 KVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLED 188

Query: 159 AIKYVKELQERLKWAEEEAADQKRVLKSVVFAKR--IDLDPDTDNKNSL-----PVENGG 218
           AIK++K+LQER+K  EEE    K++ +S++  KR  + LD D+ + +S      P+ +  
Sbjct: 189 AIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSS 248

Query: 219 ---GFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHS 278
                  + +P IE RV  +D+LIR+HC+K+KGC   IL  +EK  L +VNS  LPFG+S
Sbjct: 249 DEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNS 308

Query: 279 TLDITIVAKTEAGYCMTAMNLGKKLRETLVE 300
           TL ITI+ K +  +      + K +R  L E
Sbjct: 309 TLVITILTKMDNKFSRPVEEVVKNIRVALAE 320

[Close]

BLAST of Lsi01G008430 vs. TAIR10
Match: AT2G22750.2 (AT2G22750.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-35
Identity = 86/181 (47.51%), Postives = 120/181 (66.30%), Query Frame = 1


Query: 115 NSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAE 174
           +  N +DH++AER+RREKL+Q F+ALSALIPGL K DKASVLG AIK++K LQE +K  E
Sbjct: 120 SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYE 179

Query: 175 EEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPVENGG--GFSFRPVPKIETRVLGKDVLI 234
           E+   +++ ++SVV  K+  L  D +++ S    + G    S   +P+IE RV GKDVLI
Sbjct: 180 EQ--KKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLI 239

Query: 235 RIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAGYCMTAMNLGKK 294
           +I C+K KG    I+ +IEKL L+I NS  LPFG  T DI+I+A+    + M   ++ K 
Sbjct: 240 KILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFG-PTFDISIIAQKNNNFDMKIEDVVKN 297

[Close]

BLAST of Lsi01G008430 vs. TAIR10
Match: AT2G22760.1 (AT2G22760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 4.7e-33
Identity = 82/203 (40.39%), Postives = 124/203 (61.08%), Query Frame = 1


Query: 101 GHEIKKCATIMGPNNSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAI 160
           G   K+     G  +    K+HV+AER+RREKLS+ F+ALSAL+PGL K DK ++L  AI
Sbjct: 99  GRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAI 158

Query: 161 KYVKELQERLKWAEEEAADQKRVLKSVVFAKR----IDLDPDTDNKNSLPVENGGGFSFR 220
             +K+LQE+L+  +EE  +  R ++S++  K+     D +P+     S+ +E       +
Sbjct: 159 SRMKQLQEQLRTLKEE-KEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFD-----Q 218

Query: 221 PVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVA 280
            +P+IE ++   D+LIRI C+K KGC  NIL  IE   L I NS  LPFG STLDIT++A
Sbjct: 219 ALPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLA 278

Query: 281 KTEAGYCMTAM-NLGKKLRETLV 299
           + +  + M+ + +L + LR  +V
Sbjct: 279 QMDKDFSMSILKDLVRNLRLAMV 295

[Close]

BLAST of Lsi01G008430 vs. TAIR10
Match: AT2G46510.1 (AT2G46510.1 ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 49/161 (30.43%), Postives = 85/161 (52.80%), Query Frame = 1


Query: 121 DHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQ 180
           +HV AER+RREKL+Q F AL +++P ++K DKAS+LG AI Y+KELQE++K  E+E    
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE---- 454

Query: 181 KRVLKSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHK 240
                      R+  D      N++ VE          P+++ + + ++V++R+      
Sbjct: 455 -----------RVGTDKSLSESNTITVEES--------PEVDIQAMNEEVVVRVISPLDS 514

Query: 241 GCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAG 282
              + I+  +   N++++ +  L     T+  T V K+  G
Sbjct: 515 HPASRIIQAMRNSNVSLMEA-KLSLAEDTMFHTFVIKSNNG 531

[Close]

BLAST of Lsi01G008430 vs. NCBI nr
Match: gi|659079833|ref|XP_008440468.1| (PREDICTED: transcription factor bHLH25-like [Cucumis melo])

HSP 1 Score: 350.5 bits (898), Expect = 2.9e-93
Identity = 201/312 (64.42%), Postives = 225/312 (72.12%), Query Frame = 1


Query: 1   MEISSAKWLSELEMMECSYEYET-NNYPHDYTQYHELNFPASEKVNTF-SSSQLISFGDY 60
           MEISSAKWLS+LEMMECSYEYE     PHDYT   ELNFPA EKVN   SSSQL+SFGDY
Sbjct: 1   MEISSAKWLSDLEMMECSYEYERMKKCPHDYT-LDELNFPAKEKVNNLRSSSQLVSFGDY 60

Query: 61  SAEIEN-KFDYGRINWGGVDNIDKDFSFLISNQNGNLIEFEEEGHEIKK--CATIM---- 120
           S EIEN KFD                        GNLI   E+GHEIKK  C+TI+    
Sbjct: 61  SGEIENYKFD----------------------NYGNLIGSGEKGHEIKKDYCSTIIMGQL 120

Query: 121 -GPNNSGNGKDHVIAERRRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERL 180
              N + N  +HVIAERRRREK+ QNF+ALSALIPGL KRDKASVLGGAI+YVKELQERL
Sbjct: 121 PNRNRNHNNSEHVIAERRRREKIRQNFIALSALIPGLIKRDKASVLGGAIEYVKELQERL 180

Query: 181 KWAEEEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPV-ENGGGFSFRPVPKIETRVLGKD 240
           KWAEEEA  QK V+KSVVF KRI+LD D     +  + ENG   S R VP IE RVL KD
Sbjct: 181 KWAEEEAEKQKSVIKSVVFVKRINLDSDDSENETFSLDENGDRSSVRSVPTIEIRVLEKD 240

Query: 241 VLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAGYCMTAMNL 300
           V++RIHCKK +GC+T+IL QIEKL LTI+NSC  PFG S LDITIVA+ EAG+CMT M++
Sbjct: 241 VMVRIHCKKRQGCYTSILSQIEKLKLTILNSCVSPFGESRLDITIVAEMEAGFCMTPMDV 289

Query: 301 GKKLRETLVEFI 302
           GK LRETLVEFI
Sbjct: 301 GKNLRETLVEFI 289

[Close]

BLAST of Lsi01G008430 vs. NCBI nr
Match: gi|449451571|ref|XP_004143535.1| (PREDICTED: transcription factor bHLH25-like [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 3.8e-93
Identity = 196/297 (65.99%), Postives = 219/297 (73.74%), Query Frame = 1


Query: 15  MECSYEYET-NNYPHDYTQYHELNFPASEKVNTF-SSSQLISFGDYSAEIEN-KFDYGRI 74
           MECSYEYE    YPHDYT   ELNFPA EKVN   SS QLISFGDYS EIEN KFD    
Sbjct: 1   MECSYEYERMKKYPHDYT-LDELNFPAMEKVNNSRSSGQLISFGDYSGEIENYKFD---- 60

Query: 75  NWGGVDNIDKDFSFLISNQNGNLIEFEEEGHEIKK--CATIM-----GPNNSGNGKDHVI 134
                               GNLI FEEE HEIKK  C+TI+       N++ N  +HVI
Sbjct: 61  ------------------DYGNLIGFEEEEHEIKKDYCSTIIMGQLPNHNHNNNNSEHVI 120

Query: 135 AERRRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVL 194
           AERRRREK+ QNF+ALSALIPGL KRDKASVLGGAIK+VKELQERLKWAEE+  +QKRV+
Sbjct: 121 AERRRREKIRQNFIALSALIPGLIKRDKASVLGGAIKFVKELQERLKWAEEKEKEQKRVI 180

Query: 195 KSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFT 254
           KSVVF K I+LD D DN+     ENGG FS R VP IETRVL KDVL+RIHCKKHKGC+T
Sbjct: 181 KSVVFVKTINLDSDFDNETFSLDENGGRFSVRSVPTIETRVLEKDVLVRIHCKKHKGCYT 240

Query: 255 NILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAGYCMTAMNLGKKLRETLVEFI 302
           +I+ +IEKL LTIVNSC  PFG S LDITI+A+ EAG+CMT M+LGKKLRETL+EFI
Sbjct: 241 SIVSEIEKLKLTIVNSCVFPFGQSRLDITIIAEMEAGFCMTPMDLGKKLRETLIEFI 274

[Close]

BLAST of Lsi01G008430 vs. NCBI nr
Match: gi|700193457|gb|KGN48661.1| (hypothetical protein Csa_6G497120 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 1.1e-89
Identity = 196/316 (62.03%), Postives = 219/316 (69.30%), Query Frame = 1


Query: 14  MMECSYEYET-NNYPHDYTQYHELNFPASEKVNTF-SSSQLISFGDYSAEIEN-KFDYGR 73
           MMECSYEYE    YPHDYT   ELNFPA EKVN   SS QLISFGDYS EIEN KFD   
Sbjct: 1   MMECSYEYERMKKYPHDYT-LDELNFPAMEKVNNSRSSGQLISFGDYSGEIENYKFD--- 60

Query: 74  INWGGVDNIDKDFSFLISNQNGNLIEFEEEGHEIKK--CATIM-----GPNNSGNGKDHV 133
                                GNLI FEEE HEIKK  C+TI+       N++ N  +HV
Sbjct: 61  -------------------DYGNLIGFEEEEHEIKKDYCSTIIMGQLPNHNHNNNNSEHV 120

Query: 134 IAERRRREKLSQNFLALSALIPGL------------------NKRDKASVLGGAIKYVKE 193
           IAERRRREK+ QNF+ALSALIPGL                   K DKASVLGGAIK+VKE
Sbjct: 121 IAERRRREKIRQNFIALSALIPGLIKDHDGHTVLQVEVSVEGLKADKASVLGGAIKFVKE 180

Query: 194 LQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPKIETRV 253
           LQERLKWAEE+  +QKRV+KSVVF K I+LD D DN+     ENGG FS R VP IETRV
Sbjct: 181 LQERLKWAEEKEKEQKRVIKSVVFVKTINLDSDFDNETFSLDENGGRFSVRSVPTIETRV 240

Query: 254 LGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNSCALPFGHSTLDITIVAKTEAGYCMT 302
           L KDVL+RIHCKKHKGC+T+I+ +IEKL LTIVNSC  PFG S LDITI+A+ EAG+CMT
Sbjct: 241 LEKDVLVRIHCKKHKGCYTSIVSEIEKLKLTIVNSCVFPFGQSRLDITIIAEMEAGFCMT 293

[Close]

BLAST of Lsi01G008430 vs. NCBI nr
Match: gi|764517173|ref|XP_011466489.1| (PREDICTED: transcription factor bHLH18-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 140/354 (39.55%), Postives = 194/354 (54.80%), Query Frame = 1


Query: 3   ISSAKWLSELEMMECSY--EYETNNY--------------PHDYTQYHELNFPASE---- 62
           ISSAKW+SELEM + ++  +YE N +                 Y+ Y +   P ++    
Sbjct: 4   ISSAKWVSELEMEDPTFLNQYEMNFHLDYSLEDLNFRSLSAESYSSYPDFTPPQNDVDER 63

Query: 63  --------------------------KVNTFSSSQLISFGDYSAEIENKFDYGRI----- 122
                                     + ++ +SS LISF + ++      D         
Sbjct: 64  PAKQPKNNHSNWNSCTTTHDHKTTVPRASSSASSHLISFDNSNSSAYGSLDCTTTVKPKN 123

Query: 123 ----NWGGVDNIDKDFSFLISNQNGNLIEFEEEGHEIKKCATIMGPNNSGNGKDHVIAER 182
               + G +++I    S   S            G  IK+ AT+    +  + +DHV+AER
Sbjct: 124 EVQGSGGNLNSIPTLISQGNSYDPQTCSPNRAYGQGIKRAATVT--RSPLHAQDHVLAER 183

Query: 183 RRREKLSQNFLALSALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVLKSV 242
           +RREKLSQ F+ALSAL+PGL K DKASVLG AIKYVK+LQER+K  EE+AA  K+ ++SV
Sbjct: 184 KRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYVKQLQERMKILEEQAA--KKTVESV 243

Query: 243 VFAKRIDLDPDTDNKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNIL 302
           VF KR     D D  +S   EN    S +P+P+IE RV  K+VLIRIHC+K KGC  NIL
Sbjct: 244 VFVKRTQYSADDDISSS--DENFDSCSDQPLPEIEARVSDKEVLIRIHCEKKKGCLANIL 303

[Close]

BLAST of Lsi01G008430 vs. NCBI nr
Match: gi|1009145653|ref|XP_015890448.1| (PREDICTED: transcription factor bHLH25-like [Ziziphus jujuba])

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 130/281 (46.26%), Postives = 172/281 (61.21%), Query Frame = 1


Query: 41  SEKVNTFSSSQLISFGDYSAEI--------ENKFDYGRI---NWGGVDNIDKDFSFLISN 100
           S K ++ SSS LISF + SAE         +    +G I   N  G D     F  LIS 
Sbjct: 99  STKASSSSSSHLISFENNSAEKAVMPPTSEQYYASHGPIKPKNEVGSDGNMSVFPSLISR 158

Query: 101 QNGNLIEFEEEGHEIKKCATIMGPNNSG---------NGKDHVIAERRRREKLSQNFLAL 160
            +     +E + H +K    +   + S          + +DHV+AER+RREKLSQ F+AL
Sbjct: 159 TS-----YETQNHSMKHTEGVKSSSTSAGTMSRRTAIHAQDHVLAERKRREKLSQRFIAL 218

Query: 161 SALIPGLNKRDKASVLGGAIKYVKELQERLKWAEEEAADQKRVLKSVVFAKRIDLDPDTD 220
           SA++PGL K DKASVLG AIKYVK+LQER+   EE+AA  K+ ++S VF KR  +  D +
Sbjct: 219 SAVVPGLKKMDKASVLGDAIKYVKQLQERVNTLEEQAA--KKTVESAVFVKRSLVSGDDE 278

Query: 221 NKNSLPVENGGGFSFRPVPKIETRVLGKDVLIRIHCKKHKGCFTNILCQIEKLNLTIVNS 280
             +S   EN    S +P+P+IE RV  KDVLIRIHC+KHKGC +NIL ++EKL LTIVNS
Sbjct: 279 LSSS--DENFDSCSDQPLPEIEARVSDKDVLIRIHCEKHKGCLSNILSEVEKLPLTIVNS 338

Query: 281 CALPFGHSTLDITIVAKTEAGYCMTAMNLGKKLRETLVEFI 302
             LPFG STLDITIVA+ +  + M   ++ + LR+ L+ FI
Sbjct: 339 SVLPFGGSTLDITIVAQMDVEFSMNVKDIVRNLRQALLNFI 370

The following BLAST results are available for this feature:

BLAST of Lsi01G008430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH025_ARATH	2.8e-40	37.83	Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2	[more]
BH020_ARATH	5.5e-36	36.53	Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1	[more]
BH018_ARATH	6.8e-34	47.51	Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2 SV=1	[more]
BH019_ARATH	8.3e-32	40.39	Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2 SV=1	[more]
AIB_ARATH	3.5e-14	30.43	Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2...	[more]

BLAST of Lsi01G008430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLM8_CUCSA	7.9e-90	62.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497120 PE=4 SV=1	[more]
W9RQB0_9ROSA	4.4e-48	45.94	Uncharacterized protein OS=Morus notabilis GN=L484_016091 PE=4 SV=1	[more]
A0A0A0KG27_CUCSA	7.5e-48	40.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497110 PE=4 SV=1	[more]
A0A0D2PRC4_GOSRA	1.7e-47	39.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G087600 PE=4 SV=1	[more]
A0A0B0PCU7_GOSAR	2.2e-47	40.19	Transcription factor bHLH19-like protein OS=Gossypium arboreum GN=F383_28381 PE=...	[more]

BLAST of Lsi01G008430 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37850.1	1.6e-41	37.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22770.1	3.1e-37	36.53	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22750.2	3.8e-35	47.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22760.1	4.7e-33	40.39	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46510.1	2.0e-15	30.43	ABA-inducible BHLH-type transcription factor	[more]

BLAST of Lsi01G008430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079833\|ref\|XP_008440468.1\|	2.9e-93	64.42	PREDICTED: transcription factor bHLH25-like [Cucumis melo]	[more]
gi\|449451571\|ref\|XP_004143535.1\|	3.8e-93	65.99	PREDICTED: transcription factor bHLH25-like [Cucumis sativus]	[more]
gi\|700193457\|gb\|KGN48661.1\|	1.1e-89	62.03	hypothetical protein Csa_6G497120 [Cucumis sativus]	[more]
gi\|764517173\|ref\|XP_011466489.1\|	2.6e-49	39.55	PREDICTED: transcription factor bHLH18-like [Fragaria vesca subsp. vesca]	[more]
gi\|1009145653\|ref\|XP_015890448.1\|	2.6e-49	46.26	PREDICTED: transcription factor bHLH25-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G008430.1	Lsi01G008430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 121..182 score: 2.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 122..167 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 123..172 score: 4.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 117..166 score: 13
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 122..178 score: 4.71
None	No IPR available	unknown	Coil	Coil	coord: 163..183 scor
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 106..294 score: 6.3E-78coord: 1..70 score: 6.3
None	No IPR available	PANTHER	PTHR23042:SF61	TRANSCRIPTION FACTOR BHLH18-RELATED	coord: 1..70 score: 6.3E-78coord: 106..294 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G008430	Csa6G497100	Cucumber (Chinese Long) v2	culsiB434
Lsi01G008430	CSPI06G29350	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G008430	Cucsa.103610	Cucumber (Gy14) v1	cgylsiB125
Lsi01G008430	CmaCh07G006050	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G008430	CmaCh03G008670	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G008430	CmoCh03G009070	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G008430	CmoCh07G006130	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G008430	Cla014072	Watermelon (97103) v1	lsiwmB144
Lsi01G008430	MELO3C007678	Melon (DHL92) v3.5.1	lsimeB156
Lsi01G008430	ClCG01G018040	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G008430	MELO3C007678.2	Melon (DHL92) v3.6.1	lsimedB163
Lsi01G008430	Cla97C01G017280	Watermelon (97103) v2	lsiwmbB115
Lsi01G008430	Bhi03G000843	Wax gourd	lsiwgoB180
Lsi01G008430	Cp4.1LG19g10190	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G008430	Cp4.1LG10g01760	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G008430	Carg00750	Silver-seed gourd	carlsiB364
Lsi01G008430	Carg18509	Silver-seed gourd	carlsiB001
Lsi01G008430	CsaV3_6G044560	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G008430	Silver-seed gourd	carlsiB053
Lsi01G008430	Cucumber (Chinese Long) v3	cuclsiB114
Lsi01G008430	Watermelon (97103) v2	lsiwmbB148
Lsi01G008430	Bottle gourd (USVL1VR-Ls)	lsilsiB075
Lsi01G008430	Bottle gourd (USVL1VR-Ls)	lsilsiB079
Lsi01G008430	Bottle gourd (USVL1VR-Ls)	lsilsiB084
Lsi01G008430	Cucumber (Gy14) v1	cgylsiB259
Lsi01G008430	Cucumber (Gy14) v1	cgylsiB502
Lsi01G008430	Cucurbita moschata (Rifu)	cmolsiB002
Lsi01G008430	Cucurbita moschata (Rifu)	cmolsiB707
Lsi01G008430	Cucurbita pepo (Zucchini)	cpelsiB079
Lsi01G008430	Wild cucumber (PI 183967)	cpilsiB102
Lsi01G008430	Wild cucumber (PI 183967)	cpilsiB165
Lsi01G008430	Cucumber (Chinese Long) v2	culsiB106
Lsi01G008430	Cucumber (Chinese Long) v2	culsiB166
Lsi01G008430	Melon (DHL92) v3.5.1	lsimeB136
Lsi01G008430	Melon (DHL92) v3.5.1	lsimeB143
Lsi01G008430	Watermelon (Charleston Gray)	lsiwcgB122
Lsi01G008430	Watermelon (97103) v1	lsiwmB166
Lsi01G008430	Cucumber (Gy14) v2	cgyblsiB094
Lsi01G008430	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G008430	Melon (DHL92) v3.6.1	lsimedB143