Lsi01G007750 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G007750
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNucleic acid binding protein isoform 1
Locationchr01 : 6094477 .. 6095854 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCTCCCACTTTTCCCATGGAATTTTCCGGCGATCCACTTCCGACCACTATCATCGGAAGCGGCGACCCACGGATTCCGTTGCAAAACCTCTCCACCATCCGTTCTAGAATGGATGCCGTCCAAATCTTCCTATCCGATAACATCGACAGAGAAGTTCGTATCACCAATCAGCAGATGGATGCCGTTTCTTCTGAAATCGCCACCGCAATCCAACAGATCATCGTCAACGGCGCCGCTCTTCTAGCCTGCGCCGAAGCGAAAACCCCAACTGCGCCGGATTTGACGGCTTCGACGACTCGAAGTCATCCGAATCCTGTAACAGAGAAATCAATGGCGGAGCTGAAGGTCGAGGGCGTAGATGAGATTACGAGAACCGAATCTGAGGAATTTGACTCGGATTGGGAAATAGTAGAGCTGGATGCGATGGAATTGCTAGCAGAGCACATCCATTTCTGCGAAATCTGCGGGAAAGGGTTCAAGCGGGACGCGAATTTGCGGATGCATATGCGGGCCCATGGGAATCAATTCAAGACTCCAGAGGCGTTGGCCAAGCCGTTGGATGTTGTTGGTGCGGACCACAGGACGAAGCGCACGCGATTCTCGTGCCCTTACGACGGCTGTGTAAGGAATAAAATGCACAAGAAATTTAGGGCACTGAAATCGTTGATTTGCGTCAAGAATCACTTCAAGCGTAGCCACTGCCCTAAAATGTTCTCTTGCAATCGTTGCAACAAGAAGAGTTTCTCTGTAATGGCGGACTTGAAGAGCCACTTGAAGCACTGCGGTGAGTCGAAGTGGCGGTGTTCTTGTGGAACCACCTTCTCCCGTAAGGACAAACTGTTTGGTCATATGGCGCTGTTCGAAGGCCACATGCCGGCAGTGTCCGACGACACTTCTGCACCGGCGGCGACGTCGGAGATGGATGAAGATGGAGATAGTAATCAGATTTCGAAGGATGTTAATTACCCAAACGCGTCCAATGGTTCGTCGGATGATGGATCTTTTGAATCGTTTCTTGATGGGTTTGGTTCGATTGAGAATCACTGTTTGCAAGAGGTGCTGGGATTCCCCTATGATTTCGATTCGGAATCAGAATGGAAATTTTGTGGTTTTTGATGTTTGGGATTTAGTGTTTGTCTGTTTAGAGATCTGTACATATGAAATTCTTTGCGTAGATTTGGGTACTGTTATCAGTCTGAAATTAATTCATTTGCCTCTTCATTATTATTAGATTTGTGAAGTCTTCTTAGTCTGAATTTCATTCATATTTGCCTCTTCGCCCTGATTATGTTTAGATTTGTCTATATTCAAACTTGATTGTTGGAAAGTACTCCGTGTCAACTCCGATGAACTTCCTATGAGAGGATACTAA

mRNA sequence

ATGAATCCTCCCACTTTTCCCATGGAATTTTCCGGCGATCCACTTCCGACCACTATCATCGGAAGCGGCGACCCACGGATTCCGTTGCAAAACCTCTCCACCATCCGTTCTAGAATGGATGCCGTCCAAATCTTCCTATCCGATAACATCGACAGAGAAGTTCGTATCACCAATCAGCAGATGGATGCCGTTTCTTCTGAAATCGCCACCGCAATCCAACAGATCATCGTCAACGGCGCCGCTCTTCTAGCCTGCGCCGAAGCGAAAACCCCAACTGCGCCGGATTTGACGGCTTCGACGACTCGAAGTCATCCGAATCCTGTAACAGAGAAATCAATGGCGGAGCTGAAGGTCGAGGGCGTAGATGAGATTACGAGAACCGAATCTGAGGAATTTGACTCGGATTGGGAAATAGTAGAGCTGGATGCGATGGAATTGCTAGCAGAGCACATCCATTTCTGCGAAATCTGCGGGAAAGGGTTCAAGCGGGACGCGAATTTGCGGATGCATATGCGGGCCCATGGGAATCAATTCAAGACTCCAGAGGCGTTGGCCAAGCCGTTGGATGTTGTTGGTGCGGACCACAGGACGAAGCGCACGCGATTCTCGTGCCCTTACGACGGCTGTGTAAGGAATAAAATGCACAAGAAATTTAGGGCACTGAAATCGTTGATTTGCGTCAAGAATCACTTCAAGCGTAGCCACTGCCCTAAAATGTTCTCTTGCAATCGTTGCAACAAGAAGAGTTTCTCTGTAATGGCGGACTTGAAGAGCCACTTGAAGCACTGCGGTGAGTCGAAGTGGCGGTGTTCTTGTGGAACCACCTTCTCCCGTAAGGACAAACTGTTTGGTCATATGGCGCTGTTCGAAGGCCACATGCCGGCAGTGTCCGACGACACTTCTGCACCGGCGGCGACGTCGGAGATGGATGAAGATGGAGATAGTAATCAGATTTCGAAGGATGTTAATTACCCAAACGCGTCCAATGGTTCGTCGGATGATGGATCTTTTGAATCGTTTCTTGATGGGTTTGTGTTTGTCTGTTTAGAGATCTGTACATATGAAATTCTTTGCGTAGATTTGGATTTGTCTATATTCAAACTTGATTGTTGGAAAGTACTCCGTGTCAACTCCGATGAACTTCCTATGAGAGGATACTAA

Coding sequence (CDS)

ATGAATCCTCCCACTTTTCCCATGGAATTTTCCGGCGATCCACTTCCGACCACTATCATCGGAAGCGGCGACCCACGGATTCCGTTGCAAAACCTCTCCACCATCCGTTCTAGAATGGATGCCGTCCAAATCTTCCTATCCGATAACATCGACAGAGAAGTTCGTATCACCAATCAGCAGATGGATGCCGTTTCTTCTGAAATCGCCACCGCAATCCAACAGATCATCGTCAACGGCGCCGCTCTTCTAGCCTGCGCCGAAGCGAAAACCCCAACTGCGCCGGATTTGACGGCTTCGACGACTCGAAGTCATCCGAATCCTGTAACAGAGAAATCAATGGCGGAGCTGAAGGTCGAGGGCGTAGATGAGATTACGAGAACCGAATCTGAGGAATTTGACTCGGATTGGGAAATAGTAGAGCTGGATGCGATGGAATTGCTAGCAGAGCACATCCATTTCTGCGAAATCTGCGGGAAAGGGTTCAAGCGGGACGCGAATTTGCGGATGCATATGCGGGCCCATGGGAATCAATTCAAGACTCCAGAGGCGTTGGCCAAGCCGTTGGATGTTGTTGGTGCGGACCACAGGACGAAGCGCACGCGATTCTCGTGCCCTTACGACGGCTGTGTAAGGAATAAAATGCACAAGAAATTTAGGGCACTGAAATCGTTGATTTGCGTCAAGAATCACTTCAAGCGTAGCCACTGCCCTAAAATGTTCTCTTGCAATCGTTGCAACAAGAAGAGTTTCTCTGTAATGGCGGACTTGAAGAGCCACTTGAAGCACTGCGGTGAGTCGAAGTGGCGGTGTTCTTGTGGAACCACCTTCTCCCGTAAGGACAAACTGTTTGGTCATATGGCGCTGTTCGAAGGCCACATGCCGGCAGTGTCCGACGACACTTCTGCACCGGCGGCGACGTCGGAGATGGATGAAGATGGAGATAGTAATCAGATTTCGAAGGATGTTAATTACCCAAACGCGTCCAATGGTTCGTCGGATGATGGATCTTTTGAATCGTTTCTTGATGGGTTTGTGTTTGTCTGTTTAGAGATCTGTACATATGAAATTCTTTGCGTAGATTTGGATTTGTCTATATTCAAACTTGATTGTTGGAAAGTACTCCGTGTCAACTCCGATGAACTTCCTATGAGAGGATACTAA

Protein sequence

MNPPTFPMEFSGDPLPTTIIGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAVSSEIATAIQQIIVNGAALLACAEAKTPTAPDLTASTTRSHPNPVTEKSMAELKVEGVDEITRTESEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEMDEDGDSNQISKDVNYPNASNGSSDDGSFESFLDGFVFVCLEICTYEILCVDLDLSIFKLDCWKVLRVNSDELPMRGY
Homology
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BLAST of Lsi01G007750 vs. Swiss-Prot
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.0e-62
Identity = 114/203 (56.16%), Postives = 151/203 (74.38%), Query Frame = 1 

Query: 136 WEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKP-LDVVGAD 195
           +EI++L+  E+LA H HFC ICGKGFKRDANLRMHMR HG+++KT  ALAKP  + V   
Sbjct: 228 YEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGS 287

Query: 196 HRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSVMA 255
                 R+SCP+ GC RNK HKKF+ LK+++CVKNH+KR+HC K F+C+RC+ K FSV+A
Sbjct: 288 EPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIA 347

Query: 256 DLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSE----MD 315
           DLK+H KHCG++KW CSCGTTFSRKDKLFGH+ALF+GH PA+  + + P+A++       
Sbjct: 348 DLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETKPSASTSTQRGSS 407

Query: 316 EDGDSNQISKDVNYPNASNGSSD 334
           E G++NQ     N  +ASN + +
Sbjct: 408 EGGNNNQGMVGFNLGSASNANQE 430

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BLAST of Lsi01G007750 vs. Swiss-Prot
Match: STOP1_ORYSJ (Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-60
Identity = 114/198 (57.58%), Postives = 141/198 (71.21%), Query Frame = 1 

Query: 138 IVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVGADHRT 197
           +++L+  E+LA H HFC ICGKGFKRDANLRMHMR HG+++KT  ALAKP      +   
Sbjct: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327

Query: 198 KRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSVMADLK 257
             TR+SCPY GC RNK HKKF+ LK+++CVKNH+KRSHC K ++C+RCN K FSV+ADLK
Sbjct: 328 V-TRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLK 387

Query: 258 SHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEMDEDGDS-N 317
           +H KHCG  KW CSCGTTFSRKDKLFGH+ALF+GH PA+  D       SE  +  ++ N
Sbjct: 388 THEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVTGASEQPQGSEAMN 447

Query: 318 QISKDVNYPNASNGSSDD 335
            +     Y N    SSDD
Sbjct: 448 TMVGSAGY-NFPGSSSDD 463

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BLAST of Lsi01G007750 vs. Swiss-Prot
Match: ART1_ORYSJ (Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.8e-56
Identity = 98/175 (56.00%), Postives = 127/175 (72.57%), Query Frame = 1 

Query: 133 DSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVG 192
           +  +E+++L+  E+LA H HFC ICGKGFKRDANLRMHMR HG+++K+  ALAKP     
Sbjct: 210 EEKYEVLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPE 269

Query: 193 ADHRTKRT--RFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSF 252
            + +  +   R+SCP+ GC RN+MH  F+ LK+++CVKNH+KRSHC K   C RC  K F
Sbjct: 270 GEEQPPQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRF 329

Query: 253 SVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAA 306
           SVMADLK+H KHCG  +W CSCGT+FSRKDKLF H+ALF+GH PA+      P +
Sbjct: 330 SVMADLKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVALFQGHAPALPPPPPPPTS 384

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BLAST of Lsi01G007750 vs. Swiss-Prot
Match: IDD9_ARATH (Protein indeterminate-domain 9 OS=Arabidopsis thaliana GN=IDD9 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.7e-26
Identity = 68/194 (35.05%), Postives = 99/194 (51.03%), Query Frame = 1 

Query: 133 DSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVG 192
           D D E++ L    L+  +   CE+C KGFKRD NL++H R H   +K  +   K      
Sbjct: 49  DPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNK------ 108

Query: 193 ADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSV 252
              + K+  + CP   CV    H   RAL  L  +K HF R H  K + C++C+KK ++V
Sbjct: 109 --EQVKKKVYICPEKTCVH---HDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKK-YAV 168

Query: 253 MADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEMDED 312
           M+D K+H K CG  ++RC CGT FSRKD    H A  +      +   S P A + +   
Sbjct: 169 MSDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESARFVSVPPAPAYL--- 225

Query: 313 GDSNQISKDVNYPN 327
             +N +  +VN+ N
Sbjct: 229 --NNALDVEVNHGN 225

[Close]
BLAST of Lsi01G007750 vs. Swiss-Prot
Match: IDD3_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.8e-24
Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 1 

Query: 133 DSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVG 192
           D + E++ L    L+A +   CEICGKGF+RD NL++H R H   +K  +  +K +    
Sbjct: 51  DPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV---- 110

Query: 193 ADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSV 252
                ++  + CP   CV    H   RAL  L  +K HF R H  K + C +C K+ ++V
Sbjct: 111 -----RKRVYVCPEKSCVH---HHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKR-YAV 170

Query: 253 MADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEM 310
            +D K+H K CG  ++RC CGT FSR+D    H A  +    A++++T+   A S +
Sbjct: 171 QSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCD----ALAEETARLNAASHL 210

[Close]
BLAST of Lsi01G007750 vs. TrEMBL
Match: A0A0A0KGR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499870 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 4.0e-171
Identity = 312/356 (87.64%), Postives = 323/356 (90.73%), Query Frame = 1 

Query: 1   MNPPTFPMEFSGDPLPT-TIIGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQ 60
           MNPPTFP+EFSGDP+PT TIIGSGDPRI LQNLSTIRSRMDA+QIFLS NID EVRI+NQ
Sbjct: 1   MNPPTFPIEFSGDPIPTTTIIGSGDPRIALQNLSTIRSRMDALQIFLSHNIDTEVRISNQ 60

Query: 61  QMDAVSSEIATAIQQIIVNGAALLACAEAKTPTAPDLTASTTRSHPNPVTEKSMAELKVE 120
           QMDAVSSEI TA+QQIIVNGAALL CA++KTPT PDLTAS TR+HP  VT+KSMAELKVE
Sbjct: 61  QMDAVSSEIFTAVQQIIVNGAALLTCAQSKTPTPPDLTASATRTHPILVTDKSMAELKVE 120

Query: 121 GVDEITRTESEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK 180
           G DEI  TESEEFD DWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK
Sbjct: 121 GADEIAITESEEFDPDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK 180

Query: 181 TPEALAKPLD-VVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPK 240
           TPEALAKPLD VVGADHR KRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPK
Sbjct: 181 TPEALAKPLDVVVGADHRAKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPK 240

Query: 241 MFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSD 300
           MFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAV D
Sbjct: 241 MFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVPD 300

Query: 301 DT-SAPAATSEMDEDGDSNQISKDVNYPNASNGSSDDGSFESFLDGFVFV---CLE 351
           D     A TS MDEDG+SNQISKD N  N SNGSSDDGSFESFLDGF  +   CLE
Sbjct: 301 DACPTTATTSGMDEDGESNQISKDGNLQNGSNGSSDDGSFESFLDGFGLIENQCLE 356

[Close]
BLAST of Lsi01G007750 vs. TrEMBL
Match: A0A059CP40_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01587 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.6e-103
Identity = 200/332 (60.24%), Postives = 242/332 (72.89%), Query Frame = 1 

Query: 14  PLPTTI-IGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAVSSEIATAI 73
           P+P  + +G GDPR+PL NL+T+  +MD+VQ FLS ++     ++  QM  VS+EIA+AI
Sbjct: 26  PVPVPVPVGDGDPRVPLLNLATVSVKMDSVQQFLSQSLRSNALLSKDQMGMVSAEIASAI 85

Query: 74  QQIIVNGAALLACAEAKTPTAPDLTASTTRSHPNPVTEKSMAELKVEGVDEITRTESEEF 133
            Q++VNGAALLAC +  +P      A      P P     +        +   + E +E 
Sbjct: 86  HQVVVNGAALLACFQNPSPDPEPWRADPKLLPPAPAAVNPVDPAVARPPEVELKDEKDEL 145

Query: 134 DSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVG 193
           D+D EIVELDA+ELLAEH+HFC+ICGKGFKRDANLRMHMRAHGNQFKTPEALAKP   V 
Sbjct: 146 DADCEIVELDAVELLAEHVHFCDICGKGFKRDANLRMHMRAHGNQFKTPEALAKPDRCVD 205

Query: 194 ADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSV 253
           A    ++TRFSCP+DGC RNK HKKFR LKS+ICVKNHFKRSHCPKM+SCNRCNKKSFSV
Sbjct: 206 AP---RKTRFSCPFDGCNRNKGHKKFRPLKSVICVKNHFKRSHCPKMYSCNRCNKKSFSV 265

Query: 254 MADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEMDED 313
           +ADLKSHLKHCGESKW+CSCGT+FSRKDKLFGHMALFEGHMPAV+ D    A+     E+
Sbjct: 266 LADLKSHLKHCGESKWKCSCGTSFSRKDKLFGHMALFEGHMPAVAIDDEEKASGFVPMEE 325

Query: 314 GDSNQISKDVNYPNASNGSSDDGSFESFLDGF 345
            D ++ +K  +   ASN S D G F+  LDGF
Sbjct: 326 DDEDEDAKIEDEELASN-SVDSGFFDGLLDGF 353

[Close]
BLAST of Lsi01G007750 vs. TrEMBL
Match: A0A067LEL5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24026 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 7.5e-101
Identity = 205/342 (59.94%), Postives = 244/342 (71.35%), Query Frame = 1 

Query: 20  IGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAVSSEIATAIQQIIVNG 79
           + +GDPR PL NLST+++RMD++Q FLS++++    I+ + MD VS EI+TAI QII+NG
Sbjct: 18  VENGDPRNPLLNLSTVQARMDSLQRFLSESVNNNTIISKEHMDIVSCEISTAIHQIIING 77

Query: 80  AALLACAEA-KTPTA----------PDLTASTTRSHP---NPVTEKSMAELKVEGVDEIT 139
           AALL+C++  + PTA          PDL   TT+ +    N    KS A   V  ++   
Sbjct: 78  AALLSCSQVVQPPTAVKPDEKLLDLPDLKILTTKPNVLNHNSEKVKSAAAAMVAALESNL 137

Query: 140 RTES-EEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEAL 199
           + E  +E D D++IVELD +ELLAEH+HFCEICGKGFKRDANLRMHMRAHGNQFKTPEAL
Sbjct: 138 KVEEGDECDLDYDIVELDEVELLAEHVHFCEICGKGFKRDANLRMHMRAHGNQFKTPEAL 197

Query: 200 AKPLDVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNR 259
           AKP          K+TRFSCP+ GC RNK HKKFR LKS+ICV+NHFKRSHCPKMFSCNR
Sbjct: 198 AKPDKGNEFSAEVKKTRFSCPFLGCNRNKKHKKFRPLKSVICVRNHFKRSHCPKMFSCNR 257

Query: 260 CNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAV---SDDTS 319
           CNKKSFSV+ADLKSHLKHCGESKW+CSCGTTFSRKDKLFGH+ALFEGH+PAV    DD  
Sbjct: 258 CNKKSFSVVADLKSHLKHCGESKWKCSCGTTFSRKDKLFGHIALFEGHVPAVIGEDDDRV 317

Query: 320 APAATSEMDEDGDSNQISKDVNYPNASNGSSDDGSFESFLDG 344
           A      M+ED     I K     N     +DDG FE  LDG
Sbjct: 318 AKDCLVAMEEDEAEEGIVKGEKDRNC----TDDGFFEELLDG 355

[Close]
BLAST of Lsi01G007750 vs. TrEMBL
Match: G8Z266_SOLLC (Hop-interacting protein THI038 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.1e-99
Identity = 203/352 (57.67%), Postives = 242/352 (68.75%), Query Frame = 1 

Query: 8   MEFSGD--PLPTTIIGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAVS 67
           M F+GD   LP   IG  DP +PL NLS +++RMD++Q FLSD+++    +   QM+ VS
Sbjct: 1   MSFTGDLRHLPPNTIGD-DPMVPLLNLSAVQTRMDSLQKFLSDSVNSNTLLGQHQMNMVS 60

Query: 68  SEIATAIQQIIVNGAALLACAEAKTPTAP-----------DLTASTTRSHPN--PVTEKS 127
            EI +AI QIIVNGAALL+ A+   P  P           +L  +   +H    P  ++ 
Sbjct: 61  DEITSAIHQIIVNGAALLSSAQLTNPPPPPPPPPRPSSSAELKINLKSNHKRSFPEFDRR 120

Query: 128 MAELKVEGVDEITRTESEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMR 187
             E KVE +DE      EE   DWEI+ELDA+ELLAEHIHFC+ CGKGFKRDANLRMHMR
Sbjct: 121 DFESKVEVLDE-----EEEDGGDWEIIELDAVELLAEHIHFCDFCGKGFKRDANLRMHMR 180

Query: 188 AHGNQFKTPEALAKPLDVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFK 247
           AHGNQ+KTPEALAKP   + + +  KR RFSCP+ GC RNK H KFR LKS ICVKNHFK
Sbjct: 181 AHGNQYKTPEALAKPEKCIDSSNSNKRRRFSCPFIGCTRNKSHNKFRPLKSAICVKNHFK 240

Query: 248 RSHCPKMFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGH 307
           RSHCPKM+SC RCNKKSFSV+ADLKSHLKHCGE+KW+CSCGT+FSRKDKLFGHMALFEGH
Sbjct: 241 RSHCPKMYSCTRCNKKSFSVLADLKSHLKHCGETKWKCSCGTSFSRKDKLFGHMALFEGH 300

Query: 308 MPAVSDDTSAPAATSEMDEDGDSNQISKDVNYPNASNGSSD--DGSFESFLD 343
           MPAV    +APA  +E D       +  D+N   + NG  D   GS   FLD
Sbjct: 301 MPAVE---TAPAIENEKD-------VGVDIN-GGSGNGLMDIRTGSDNGFLD 335

[Close]
BLAST of Lsi01G007750 vs. TrEMBL
Match: M0ZV91_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003459 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.1e-99
Identity = 203/347 (58.50%), Postives = 239/347 (68.88%), Query Frame = 1 

Query: 8   MEFSGD--PLPTTIIGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAVS 67
           M FSGD   LP   IG  DPRIPL NLS +++RMD++Q FLSD+++    +   QM+ VS
Sbjct: 1   MSFSGDLRHLPPNTIGD-DPRIPLLNLSAVQTRMDSLQKFLSDSVNSNNLLGQHQMNMVS 60

Query: 68  SEIATAIQQIIVNGAALLACAEAKTPTAPDLTAS--------TTRSHPNPVTEKSMAELK 127
            EI +AI QIIVNGAALL+      P  P   +S        +      P  ++   E K
Sbjct: 61  DEITSAIHQIIVNGAALLSSTRLTNPPPPQPPSSVEMKINLKSNHKRSFPEFDRRDFESK 120

Query: 128 VEGVDEITRTESEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQ 187
           VE +DE      EE   DWEI+ELDA+ELLAEHIHFC+ CGKGFKRDANLRMHMRAHGNQ
Sbjct: 121 VEVLDE-----EEEDGGDWEIIELDAVELLAEHIHFCDFCGKGFKRDANLRMHMRAHGNQ 180

Query: 188 FKTPEALAKPLDVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCP 247
           +KT EALAKP   + + +  KR RFSCP+ GC RNK H KFR LKS+ICVKNHFKRSHCP
Sbjct: 181 YKTAEALAKPEKCIDSSNSNKRRRFSCPFIGCTRNKTHNKFRPLKSVICVKNHFKRSHCP 240

Query: 248 KMFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVS 307
           KM+SC RCNKKSFSV+ADLKSHLKHCGE+KW+CSCGT+FSRKDKLFGHMALFEGHMPAV 
Sbjct: 241 KMYSCTRCNKKSFSVLADLKSHLKHCGETKWKCSCGTSFSRKDKLFGHMALFEGHMPAVE 300

Query: 308 DDTSAPAATSEMDEDGDSNQISKDVNYPNASNGSSD--DGSFESFLD 343
              +APA  +E        ++  D+N   A NG  D   GS   FLD
Sbjct: 301 ---TAPAVENE-------EEVGMDIN-DGAGNGLLDIRTGSDNGFLD 330

[Close]
BLAST of Lsi01G007750 vs. TAIR10
Match: AT1G34370.2 (AT1G34370.2 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-63
Identity = 114/203 (56.16%), Postives = 151/203 (74.38%), Query Frame = 1 

Query: 136 WEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKP-LDVVGAD 195
           +EI++L+  E+LA H HFC ICGKGFKRDANLRMHMR HG+++KT  ALAKP  + V   
Sbjct: 228 YEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGS 287

Query: 196 HRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSVMA 255
                 R+SCP+ GC RNK HKKF+ LK+++CVKNH+KR+HC K F+C+RC+ K FSV+A
Sbjct: 288 EPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIA 347

Query: 256 DLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSE----MD 315
           DLK+H KHCG++KW CSCGTTFSRKDKLFGH+ALF+GH PA+  + + P+A++       
Sbjct: 348 DLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETKPSASTSTQRGSS 407

Query: 316 EDGDSNQISKDVNYPNASNGSSD 334
           E G++NQ     N  +ASN + +
Sbjct: 408 EGGNNNQGMVGFNLGSASNANQE 430

[Close]
BLAST of Lsi01G007750 vs. TAIR10
Match: AT5G22890.1 (AT5G22890.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 218.4 bits (555), Expect = 7.7e-57
Identity = 99/169 (58.58%), Postives = 129/169 (76.33%), Query Frame = 1 

Query: 129 SEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPL 188
           S+     ++I+ELD  +LLA++ H+C+ICGKGFKRDANLRMHMRAHG+++KT EAL  P 
Sbjct: 194 SKPSSGSYDILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPT 253

Query: 189 --DVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCN 248
             D  G  +  K+  +SCP  GC  N+ H+KF+ LKS+IC KNH+KRSHCPKM+ C RC+
Sbjct: 254 SQDKKGG-YSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCS 313

Query: 249 KKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPA 296
            K FSV++DL++H KHCG+ KW CSCGT FSRKDKL  H++LF GH+PA
Sbjct: 314 VKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGHVPA 361

[Close]
BLAST of Lsi01G007750 vs. TAIR10
Match: AT3G45260.1 (AT3G45260.1 C2H2-like zinc finger protein)

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-27
Identity = 68/194 (35.05%), Postives = 99/194 (51.03%), Query Frame = 1 

Query: 133 DSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVG 192
           D D E++ L    L+  +   CE+C KGFKRD NL++H R H   +K  +   K      
Sbjct: 49  DPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNK------ 108

Query: 193 ADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSV 252
              + K+  + CP   CV    H   RAL  L  +K HF R H  K + C++C+KK ++V
Sbjct: 109 --EQVKKKVYICPEKTCVH---HDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKK-YAV 168

Query: 253 MADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEMDED 312
           M+D K+H K CG  ++RC CGT FSRKD    H A  +      +   S P A + +   
Sbjct: 169 MSDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESARFVSVPPAPAYL--- 225

Query: 313 GDSNQISKDVNYPN 327
             +N +  +VN+ N
Sbjct: 229 --NNALDVEVNHGN 225

[Close]
BLAST of Lsi01G007750 vs. TAIR10
Match: AT5G66730.1 (AT5G66730.1 C2H2-like zinc finger protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-25
Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = 1 

Query: 95  DLTASTTRSHPNPVTEKSMAELKVEGVDEITRTESEEFDSDWEIVELDAMELLAEHIHFC 154
           DL  S+T S    V+      L  + V +  R      D D E++ L    L+A +   C
Sbjct: 4   DLDNSSTVSGDASVSSTGNQNLTPKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVC 63

Query: 155 EICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVGADHRTKRTRFSCPYDGCVRNKM 214
           EIC KGF+RD NL++H R H   +K  +   K +         ++  + CP  GCV    
Sbjct: 64  EICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEV---------RKKVYVCPVSGCVH--- 123

Query: 215 HKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGT 274
           H   RAL  L  +K HF R H  K + C +C+KK ++V +D K+H K CG  +++C CGT
Sbjct: 124 HDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKK-YAVQSDWKAHSKICGTKEYKCDCGT 183

Query: 275 TFSRKDKLFGHMA 288
            FSR+D    H A
Sbjct: 184 LFSRRDSFITHRA 183

[Close]
BLAST of Lsi01G007750 vs. TAIR10
Match: AT1G03840.1 (AT1G03840.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-25
Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 1 

Query: 133 DSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVG 192
           D + E++ L    L+A +   CEICGKGF+RD NL++H R H   +K  +  +K +    
Sbjct: 51  DPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV---- 110

Query: 193 ADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSV 252
                ++  + CP   CV    H   RAL  L  +K HF R H  K + C +C K+ ++V
Sbjct: 111 -----RKRVYVCPEKSCVH---HHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKR-YAV 170

Query: 253 MADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEM 310
            +D K+H K CG  ++RC CGT FSR+D    H A  +    A++++T+   A S +
Sbjct: 171 QSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCD----ALAEETARLNAASHL 210

[Close]
BLAST of Lsi01G007750 vs. NCBI nr
Match: gi|659080061|ref|XP_008440589.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Cucumis melo])

HSP 1 Score: 615.1 bits (1585), Expect = 8.1e-173
Identity = 312/347 (89.91%), Postives = 321/347 (92.51%), Query Frame = 1 

Query: 1   MNPPTFPMEFSGDPLP-TTIIGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQ 60
           MNPPTFP++FSGDPLP +TIIGSGDPRIPLQNLSTIRS MDA+Q FLS NI REVRI+NQ
Sbjct: 87  MNPPTFPIQFSGDPLPASTIIGSGDPRIPLQNLSTIRSSMDALQSFLSHNIHREVRISNQ 146

Query: 61  QMDAVSSEIATAIQQIIVNGAALLACAEAKTPTAPDLTASTTRSHPNPVTEKSMAELKVE 120
           QMDAVSSEI TAIQQIIVNGAALL CA++KTPT PDLTASTTR+ PN VTEKSMAELKVE
Sbjct: 147 QMDAVSSEIFTAIQQIIVNGAALLTCAQSKTPTPPDLTASTTRTQPNSVTEKSMAELKVE 206

Query: 121 GVDEITRTESEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK 180
           GVDEIT TESEE D DWE+VELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK
Sbjct: 207 GVDEITITESEESDPDWEVVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK 266

Query: 181 TPEALAKPLDVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKM 240
           TPEALAKPLD VGADHR KRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKM
Sbjct: 267 TPEALAKPLDDVGADHRAKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKM 326

Query: 241 FSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDD 300
           FSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAV DD
Sbjct: 327 FSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVPDD 386

Query: 301 TSAPAA--TSEMDEDGDSNQISKDVNYPNASNGSSDDGSFESFLDGF 345
             A  A  TSEMDEDGDSNQISKDVN  N SN SSDDGSFESFLDGF
Sbjct: 387 ACATVATTTSEMDEDGDSNQISKDVNLQNGSNVSSDDGSFESFLDGF 433

[Close]
BLAST of Lsi01G007750 vs. NCBI nr
Match: gi|449451615|ref|XP_004143557.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Cucumis sativus])

HSP 1 Score: 609.0 bits (1569), Expect = 5.8e-171
Identity = 312/356 (87.64%), Postives = 323/356 (90.73%), Query Frame = 1 

Query: 1   MNPPTFPMEFSGDPLPT-TIIGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQ 60
           MNPPTFP+EFSGDP+PT TIIGSGDPRI LQNLSTIRSRMDA+QIFLS NID EVRI+NQ
Sbjct: 1   MNPPTFPIEFSGDPIPTTTIIGSGDPRIALQNLSTIRSRMDALQIFLSHNIDTEVRISNQ 60

Query: 61  QMDAVSSEIATAIQQIIVNGAALLACAEAKTPTAPDLTASTTRSHPNPVTEKSMAELKVE 120
           QMDAVSSEI TA+QQIIVNGAALL CA++KTPT PDLTAS TR+HP  VT+KSMAELKVE
Sbjct: 61  QMDAVSSEIFTAVQQIIVNGAALLTCAQSKTPTPPDLTASATRTHPILVTDKSMAELKVE 120

Query: 121 GVDEITRTESEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK 180
           G DEI  TESEEFD DWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK
Sbjct: 121 GADEIAITESEEFDPDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFK 180

Query: 181 TPEALAKPLD-VVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPK 240
           TPEALAKPLD VVGADHR KRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPK
Sbjct: 181 TPEALAKPLDVVVGADHRAKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPK 240

Query: 241 MFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSD 300
           MFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAV D
Sbjct: 241 MFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVPD 300

Query: 301 DT-SAPAATSEMDEDGDSNQISKDVNYPNASNGSSDDGSFESFLDGFVFV---CLE 351
           D     A TS MDEDG+SNQISKD N  N SNGSSDDGSFESFLDGF  +   CLE
Sbjct: 301 DACPTTATTSGMDEDGESNQISKDGNLQNGSNGSSDDGSFESFLDGFGLIENQCLE 356

[Close]
BLAST of Lsi01G007750 vs. NCBI nr
Match: gi|702296011|ref|XP_010048109.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Eucalyptus grandis])

HSP 1 Score: 383.3 bits (983), Expect = 5.2e-103
Identity = 200/332 (60.24%), Postives = 242/332 (72.89%), Query Frame = 1 

Query: 14  PLPTTI-IGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAVSSEIATAI 73
           P+P  + +G GDPR+PL NL+T+  +MD+VQ FLS ++     ++  QM  VS+EIA+AI
Sbjct: 26  PVPVPVPVGDGDPRVPLLNLATVSVKMDSVQQFLSQSLRSNALLSKDQMGMVSAEIASAI 85

Query: 74  QQIIVNGAALLACAEAKTPTAPDLTASTTRSHPNPVTEKSMAELKVEGVDEITRTESEEF 133
            Q++VNGAALLAC +  +P      A      P P     +        +   + E +E 
Sbjct: 86  HQVVVNGAALLACFQNPSPDPEPWRADPKLLPPAPAAVNPVDPAVARPPEVELKDEKDEL 145

Query: 134 DSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVG 193
           D+D EIVELDA+ELLAEH+HFC+ICGKGFKRDANLRMHMRAHGNQFKTPEALAKP   V 
Sbjct: 146 DADCEIVELDAVELLAEHVHFCDICGKGFKRDANLRMHMRAHGNQFKTPEALAKPDRCVD 205

Query: 194 ADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSV 253
           A    ++TRFSCP+DGC RNK HKKFR LKS+ICVKNHFKRSHCPKM+SCNRCNKKSFSV
Sbjct: 206 AP---RKTRFSCPFDGCNRNKGHKKFRPLKSVICVKNHFKRSHCPKMYSCNRCNKKSFSV 265

Query: 254 MADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDDTSAPAATSEMDED 313
           +ADLKSHLKHCGESKW+CSCGT+FSRKDKLFGHMALFEGHMPAV+ D    A+     E+
Sbjct: 266 LADLKSHLKHCGESKWKCSCGTSFSRKDKLFGHMALFEGHMPAVAIDDEEKASGFVPMEE 325

Query: 314 GDSNQISKDVNYPNASNGSSDDGSFESFLDGF 345
            D ++ +K  +   ASN S D G F+  LDGF
Sbjct: 326 DDEDEDAKIEDEELASN-SVDSGFFDGLLDGF 353

[Close]
BLAST of Lsi01G007750 vs. NCBI nr
Match: gi|802536969|ref|XP_012088310.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas])

HSP 1 Score: 375.6 bits (963), Expect = 1.1e-100
Identity = 205/342 (59.94%), Postives = 244/342 (71.35%), Query Frame = 1 

Query: 20  IGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAVSSEIATAIQQIIVNG 79
           + +GDPR PL NLST+++RMD++Q FLS++++    I+ + MD VS EI+TAI QII+NG
Sbjct: 18  VENGDPRNPLLNLSTVQARMDSLQRFLSESVNNNTIISKEHMDIVSCEISTAIHQIIING 77

Query: 80  AALLACAEA-KTPTA----------PDLTASTTRSHP---NPVTEKSMAELKVEGVDEIT 139
           AALL+C++  + PTA          PDL   TT+ +    N    KS A   V  ++   
Sbjct: 78  AALLSCSQVVQPPTAVKPDEKLLDLPDLKILTTKPNVLNHNSEKVKSAAAAMVAALESNL 137

Query: 140 RTES-EEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEAL 199
           + E  +E D D++IVELD +ELLAEH+HFCEICGKGFKRDANLRMHMRAHGNQFKTPEAL
Sbjct: 138 KVEEGDECDLDYDIVELDEVELLAEHVHFCEICGKGFKRDANLRMHMRAHGNQFKTPEAL 197

Query: 200 AKPLDVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNR 259
           AKP          K+TRFSCP+ GC RNK HKKFR LKS+ICV+NHFKRSHCPKMFSCNR
Sbjct: 198 AKPDKGNEFSAEVKKTRFSCPFLGCNRNKKHKKFRPLKSVICVRNHFKRSHCPKMFSCNR 257

Query: 260 CNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAV---SDDTS 319
           CNKKSFSV+ADLKSHLKHCGESKW+CSCGTTFSRKDKLFGH+ALFEGH+PAV    DD  
Sbjct: 258 CNKKSFSVVADLKSHLKHCGESKWKCSCGTTFSRKDKLFGHIALFEGHVPAVIGEDDDRV 317

Query: 320 APAATSEMDEDGDSNQISKDVNYPNASNGSSDDGSFESFLDG 344
           A      M+ED     I K     N     +DDG FE  LDG
Sbjct: 318 AKDCLVAMEEDEAEEGIVKGEKDRNC----TDDGFFEELLDG 355

[Close]
BLAST of Lsi01G007750 vs. NCBI nr
Match: gi|747099047|ref|XP_011097563.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Sesamum indicum])

HSP 1 Score: 374.0 bits (959), Expect = 3.1e-100
Identity = 205/347 (59.08%), Postives = 246/347 (70.89%), Query Frame = 1 

Query: 5   TFPMEFSGDPLPTTIIGSGDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRITNQQMDAV 64
           T P   +   +P  + G  DPR+PL NLS +++RMD +Q FLSD+++    +   QMD V
Sbjct: 14  TKPPSGASSVVPPQLSGGADPRVPLMNLSIVQTRMDCLQKFLSDSVNSNTLLGQPQMDMV 73

Query: 65  SSEIATAIQQIIVNGAALLACAEAKTPT-APDLTASTTRSHPNPVTEKSMAELKVEGVDE 124
           SSEIA+AI QIIVNGAALL+   + + +   + T    +   NP   KS+   KVE    
Sbjct: 74  SSEIASAIHQIIVNGAALLSSTPSLSSSYGVENTEEKEKGLQNP--GKSVLNPKVE---- 133

Query: 125 ITRTESEEFDSDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEA 184
               + +E   D+EI+ELDA+ELLAEH+HFCEICGKGFKRDANLRMHMRAHGNQFKTPEA
Sbjct: 134 ---IQEDEVLDDYEIIELDAVELLAEHVHFCEICGKGFKRDANLRMHMRAHGNQFKTPEA 193

Query: 185 LAKPLDVVGADHRTKRTRFSCPYDGCVRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCN 244
           LAKP    G +   +RTRFSCPY GC RNK HKKFR LKS ICVKNHFKRSHCPKM+SCN
Sbjct: 194 LAKPEK--GGELIGQRTRFSCPYVGCNRNKQHKKFRPLKSAICVKNHFKRSHCPKMYSCN 253

Query: 245 RCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVSDD---- 304
           RCNKKSFSV+ADLKSHLKHCGESKWRCSCGT+FSRKDKLFGHMALFEGHMPAV DD    
Sbjct: 254 RCNKKSFSVVADLKSHLKHCGESKWRCSCGTSFSRKDKLFGHMALFEGHMPAVVDDGKEE 313

Query: 305 -TSAPAATSEMDEDGDSNQIS-KDVNYPNASNGSSDDGSFESFLDGF 345
              + AA   +D+D +  +++ K V         S++G FE  +DGF
Sbjct: 314 KGKSMAAVMVVDDDEEEEEMNVKGVGVGMTCGLESNNGLFEGPMDGF 349

The following BLAST results are available for this feature:
BLAST of Lsi01G007750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
STOP1_ARATH2.0e-6256.16Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=... [more]
STOP1_ORYSJ1.1e-6057.58Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g087120... [more]
ART1_ORYSJ2.8e-5656.00Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1[more]
IDD9_ARATH6.7e-2635.05Protein indeterminate-domain 9 OS=Arabidopsis thaliana GN=IDD9 PE=2 SV=1[more]
IDD3_ARATH4.8e-2435.03Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1[more]
BLAST of Lsi01G007750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGR6_CUCSA4.0e-17187.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499870 PE=4 SV=1[more]
A0A059CP40_EUCGR3.6e-10360.24Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01587 PE=4 SV=1[more]
A0A067LEL5_JATCU7.5e-10159.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24026 PE=4 SV=1[more]
G8Z266_SOLLC4.1e-9957.67Hop-interacting protein THI038 OS=Solanum lycopersicum PE=2 SV=1[more]
M0ZV91_SOLTU4.1e-9958.50Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003459 PE=4 SV=1[more]
BLAST of Lsi01G007750 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G34370.21.1e-6356.16 C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G22890.17.7e-5758.58 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G45260.13.7e-2735.05 C2H2-like zinc finger protein[more]
AT5G66730.12.7e-2535.23 C2H2-like zinc finger protein[more]
AT1G03840.12.7e-2535.03 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Lsi01G007750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659080061|ref|XP_008440589.1|8.1e-17389.91PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Cucumis melo][more]
gi|449451615|ref|XP_004143557.1|5.8e-17187.64PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Cucumis sativus][more]
gi|702296011|ref|XP_010048109.1|5.2e-10360.24PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Eucalyptus grandis][more]
gi|802536969|ref|XP_012088310.1|1.1e-10059.94PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas][more]
gi|747099047|ref|XP_011097563.1|3.1e-10059.08PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR015880Zinc finger, C2H2-like
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G007750.1Lsi01G007750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 154..174
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 152..179
score: 11
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 152..174
score: 1.
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 202..235
score: 100.0coord: 240..262
score: 18.0coord: 268..292
score: 210.0coord: 152..174
score: 0.
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 133..295
score: 1.2
NoneNo IPR availablePANTHERPTHR10593:SF41SUBFAMILY NOT NAMEDcoord: 133..295
score: 1.2
NoneNo IPR availablePFAMPF12874zf-metcoord: 153..172
score: 0.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 149..175
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G007750Csa6G499870Cucumber (Chinese Long) v2culsiB434
Lsi01G007750CSPI06G30180Wild cucumber (PI 183967)cpilsiB439
Lsi01G007750Cucsa.104330Cucumber (Gy14) v1cgylsiB125
Lsi01G007750CmaCh07G005470Cucurbita maxima (Rimu)cmalsiB786
Lsi01G007750CmoCh03G008510Cucurbita moschata (Rifu)cmolsiB582
Lsi01G007750CmoCh07G005510Cucurbita moschata (Rifu)cmolsiB774
Lsi01G007750Cla014139Watermelon (97103) v1lsiwmB144
Lsi01G007750MELO3C007752Melon (DHL92) v3.5.1lsimeB156
Lsi01G007750ClCG01G018720Watermelon (Charleston Gray)lsiwcgB127
Lsi01G007750MELO3C007752.2Melon (DHL92) v3.6.1lsimedB163
Lsi01G007750Cla97C01G018120Watermelon (97103) v2lsiwmbB115
Lsi01G007750Bhi03G000898Wax gourdlsiwgoB181
Lsi01G007750Cp4.1LG19g09880Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G007750CsGy6G029660Cucumber (Gy14) v2cgyblsiB398
Lsi01G007750Carg00700Silver-seed gourdcarlsiB364
Lsi01G007750Carg15989Silver-seed gourdcarlsiB693
Lsi01G007750CsaV3_6G045380Cucumber (Chinese Long) v3cuclsiB462
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G007750Melon (DHL92) v3.6.1lsimedB143
Lsi01G007750Silver-seed gourdcarlsiB053
Lsi01G007750Silver-seed gourdcarlsiB855
Lsi01G007750Silver-seed gourdcarlsiB929
Lsi01G007750Cucumber (Chinese Long) v3cuclsiB114
Lsi01G007750Watermelon (97103) v2lsiwmbB148
Lsi01G007750Wax gourdlsiwgoB155
Lsi01G007750Bottle gourd (USVL1VR-Ls)lsilsiB083
Lsi01G007750Bottle gourd (USVL1VR-Ls)lsilsiB084
Lsi01G007750Cucumber (Gy14) v1cgylsiB259
Lsi01G007750Cucurbita maxima (Rimu)cmalsiB597
Lsi01G007750Cucurbita maxima (Rimu)cmalsiB639
Lsi01G007750Cucurbita maxima (Rimu)cmalsiB718
Lsi01G007750Cucurbita moschata (Rifu)cmolsiB153
Lsi01G007750Cucurbita moschata (Rifu)cmolsiB628
Lsi01G007750Cucurbita moschata (Rifu)cmolsiB707
Lsi01G007750Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G007750Cucurbita pepo (Zucchini)cpelsiB079
Lsi01G007750Cucurbita pepo (Zucchini)cpelsiB164
Lsi01G007750Cucurbita pepo (Zucchini)cpelsiB326
Lsi01G007750Cucurbita pepo (Zucchini)cpelsiB664
Lsi01G007750Wild cucumber (PI 183967)cpilsiB102
Lsi01G007750Cucumber (Chinese Long) v2culsiB106
Lsi01G007750Melon (DHL92) v3.5.1lsimeB136
Lsi01G007750Watermelon (Charleston Gray)lsiwcgB152
Lsi01G007750Watermelon (97103) v1lsiwmB131
Lsi01G007750Cucumber (Gy14) v2cgyblsiB094