Lsi01G007060 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGTTTGAACTGAATGTCATTTGAAGAAGGCTTCAAAAGGAAGACAGAGGGAGAGAATAAAAAAAAGAAAAAGGGAACGTTCAAATCATACGCTTCGTCTCGCAGTCGGCTTGGTATCGACGCAGTCCATGGTAAGTTGGTAACCGAGCGTCTGCATTCTGCCATGGACGAACCCCCTATTTGTGCAACCAGTTGCAGCGCCTTGGCTGAAGAAATCACCGACAACGATCGCGAAGAAATCACGGCGGTTGATTCATCTCCGGGGAACTCAACCCGGACGCTTTACGACCCTCCGCCGTGCTCAAATCGTAATAGGAAGAAGAAGAAGAAGAAGAAAAAAAGGGTTGTCATTGATAACGTCCAAGAACTTCCTTCTTCGTCGTCTTCTTGTTCTTCGCCCGCCAGATTGTTGCAGAGAGGCGTCAATTGCAAACGCCGACGCCCCAAGGTTCTAATTGCTCAATCGCGGCGTATCGATGGCGATTTTGAAAATGTGGCGCTTTTATTGGGAATGTCATTCGCAGCTTTTGTTGCTCAGGTTCGTCTTCTTTTCCTGTTTCATGGGGTTTCTCAGGCTAGGGGAAAGTTTGCTTCTTGGTTGTGTTGTTTTCGTTTTCATGCTTCTAAACGGTCAAGATTCTCATAATTCAATCTATTATACATCATTTATGATTTTTTTTTCCTTTCAAATTATTAGGGAAGAGAAGTTTAAATGTTGACATTTAATTCTATTGCAAATTTGATTACCGTATTCAGATGAAGTTGAATGCGCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCGTTTAGCGTTTATCTTGCTCATCAGATTTTCTAGGAGTAAGGACATGTGAAATTTCTACAAATTTTGGTAGTACGTGAAGAAAGGAGTTGAACATGGCATATTATGATGTTAATTTTTAAAGGCTTAACCACTACGTGTTTGTGTGTTTCTGAGAATTACTAGTTTTAGTTGTTTATTGACGTTTGAGTGGTTTTTCTGTTCTTTTTATTTCTGACTCTAGGTGCTTGAGAGGCAGGACATGTCTGATGGAAGGATGCCCGTTGATCATCTCTCAGTGGTATGCTACTGTTCTCTATAATTTGAATGCCTGAAGAAGCTTTGAAACTAAGTTAGCTATTATTGTTTTTCTGTATGTGAAGCAATATTCATTAATGAATACTAAGAATAATCTTTACAAATTAAGCAGGGTCTCAATGTCCTATGCTGCTATGTTTAAGAAGTGAACTAAGAAATTGTTGAAATTTAAAAAAATAAAGACAAAAAACAATTAGACCCTATTTGATAACCATTTGGTTTTTAAAAATTTTGCTTATTTTCTCACAATTTCCTTACCATGGTTCTCATCTTTTCTAAACAAAAACAAGTTTTTAAAGACTACTTTTTTTTTTTACTTTTCAAATGTTGGCTTGGATTTCAAAAACACCCTTAAAAATAGATAATAAAAGAAAGAAATCAATAAGTGAAAGTACTCATTTTCAAAAACCAAATGGTTATTAAACGGTACCTTAATATTCACACATCTCCTTGGAATTTTTTTTGAGTAGTGTTGTATGGTCATTCCTAATCTATTCTTATTCAAATTGTCATATTTATTAGGAATATTTTAACTTCTTTGCCTCATAATTCCCACAATGTAGCCATAGGTGTGACGTTAATCTTGATTCGCTTGTGTTAATCTGGTCTGCCGAGTTTTGACCTTCTTTTTTTCATTGAAATTATTGTATGCATTGAGCCATATGATGCAAGATCATCTTTTCTACCTGCAGATATGCACTTCGGCTATAAGAGAATCTTTGGTCAATGTAAGTTTGATCTACACCTCTTTTCGACTATTTCATTTTTACATGTTCTCTGTTATTCATTCAGCGTTGCCCAGAGTCCAAGACGCTGAAGTCCCTTCAACATGCCTATTTTTTGACTGGTTATATGGAAACAGGTTGTCGGGGACAAGCTTGATTGGTTTTTAAAGAAATTTGAGAAGTCATTTGGCAGCACGTTAAGAACTCTTAGATCAATCAGTGAAGCATCTGCAAGAACTGGAGTGTATTCCTCCAAGAAACGCAGGGAAGAAAAAATCACAGTAGATCTGACCCTTGATAGGAAAAGGGATGTGACAAGTAGCTCTAGTCTGGAAGAATGTATCTTGGAAGAATCTTCTAGTACAGGCGGACCTGTTGATCAATTAGGTTTAATTGAAGATATGAAGGAAAGCGTTTCTGAATCATTTACTCGTGAGTTGGCTTTGTGTAGACTGACAAATGACGTGGCTTCTGTTGCCCCACGGGAAGTTGGTTCCCATAGCAAAGAGATAGCAGTTGGCACTTTTGAAAGATCTGTTGTCGAACAGGTGCGTTCCAATGATCTTAAGACAATGGAGCTTGGCCTTGCAATGAGGAAATTAAAGTTGAAAGAGACACAGATCGCACTCAATTATGACTTAAACAATCTTGAGAGGTCAAAATTGGCAATGGGCATATCAAAAGCCTCTTTTAAGGCTGAGAAGTTCAAGAGTCAGTTAGAAGAAACGAGACATTCGGAACTGCTTAAAAAGTGCATAGACTGTCTTGTTGCTGGTTTGCTTATAATGTCCATGGCCCTCTCTTACGGCGCATATGTTTATTCATATCATAGAATTTCTGAAGCTACTGCAACCTGCACTCCTTCAACCCAGGCAAGTGTAGCCCCTTCTTCCCGTTATGGTTTGTTTCATACACTCGTAGATTTGCAACTTGAAAACTGCATATGTTATGATGAATTTGATTGTTTGTCCACGTACAATTTTCTAGAATCCAAGTTCAGATCATTTCTACCAAATATTTTGGAGAACAATCCTCTATGATTTTTTTAATAGATGTGTTTTCTCATCACATATTGTTTGAATTAAAAGCATTCATTCAACGAACTTATTTTAGATTCTTTGCTCCTTACAGGAATCAAAATCTTGGTGGATGCCAAGTCCTATGGCATCTTTGAACTCCGGATGGCATATGTTAAGGTGTCAAGTTCAAGTTGTTAGCCGGATGGTGTTCGGTGTGATTATGATTGTTGCAGTTGCTTACTTGCTTCTCCAACGCTCATCAACTTCAAACCAGGCAATGCCAGTTACTTTCATCGTCTTGCTGCTCGGATTTGTCTGCGGTTTAGCTGGGAAGTTATGCATCGACACACTGGGAGGAAGCGGATTTCATTGGCTTGTGGTCTGGGAAACATTGTGCTTATTGCACTTATTTGCAAACATTTTTACGTCTGCACTGTTTCTGATCCTACACGGTCCAATTGAGGTTTCTCGGGGGAAAAATCGCTACACGATTTTGCCATATTGGTTTCGCCGTGCTGTATTCTACTCCCTTCTGCTTGTGTTTATGCCATTGTTATGTGGGCTAATTCCATTTGCAGGTATTAGTGAATGGAAAGAGCATTTTTGTCTTCTGGTAACTGAAATGATTGCAGCAGACGACTACTGAAGCTTTGGGTTCGAGTCGAATTGCATTTTGTTCTGTAGTATAATCCAATTAATTGGGTTACTTATTATGTATTAGTTTTTATAGGAGCCCCAAAAGGAGATGGCTTTGGAGTTAAACTGCTAATTTATGTTATTATTATTAATGTATGAATAATAATGATAACTACAGTACGTTGAGCCACTATTTTGCTTCACTCTTTCCTCTTGATTTTTACACTT CAAGTTTGAACTGAATGTCATTTGAAGAAGGCTTCAAAAGGAAGACAGAGGGAGAGAATAAAAAAAAGAAAAAGGGAACGTTCAAATCATACGCTTCGTCTCGCAGTCGGCTTGGTATCGACGCAGTCCATGGTAAGTTGGTAACCGAGCGTCTGCATTCTGCCATGGACGAACCCCCTATTTGTGCAACCAGTTGCAGCGCCTTGGCTGAAGAAATCACCGACAACGATCGCGAAGAAATCACGGCGGTTGATTCATCTCCGGGGAACTCAACCCGGACGCTTTACGACCCTCCGCCGTGCTCAAATCGTAATAGGAAGAAGAAGAAGAAGAAGAAAAAAAGGGTTGTCATTGATAACGTCCAAGAACTTCCTTCTTCGTCGTCTTCTTGTTCTTCGCCCGCCAGATTGTTGCAGAGAGGCGTCAATTGCAAACGCCGACGCCCCAAGGTTCTAATTGCTCAATCGCGGCGTATCGATGGCGATTTTGAAAATGTGGCGCTTTTATTGGGAATGTCATTCGCAGCTTTTGTTGCTCAGGTGCTTGAGAGGCAGGACATGTCTGATGGAAGGATGCCCGTTGATCATCTCTCAGTGCAATATTCATTAATGAATACTAAGAATAATCTTTACAAATTAAGCAGGGTCTCAATGAATATTTTAACTTCTTTGCCTCATAATTCCCACAATGTAGCCATAGGTGTGACGTTAATCTTGATTCGCTTCCATATGATGCAAGATCATCTTTTCTACCTGCAGATATGCACTTCGGCTATAAGAGAATCTTTGGTCAATGTTGTCGGGGACAAGCTTGATTGGTTTTTAAAGAAATTTGAGAAGTCATTTGGCAGCACGTTAAGAACTCTTAGATCAATCAGTGAAGCATCTGCAAGAACTGGAGTGTATTCCTCCAAGAAACGCAGGGAAGAAAAAATCACAGTAGATCTGACCCTTGATAGGAAAAGGGATGTGACAAGTAGCTCTAGTCTGGAAGAATGTATCTTGGAAGAATCTTCTAGTACAGGCGGACCTGTTGATCAATTAGGTTTAATTGAAGATATGAAGGAAAGCGTTTCTGAATCATTTACTCGTGAGTTGGCTTTGTGTAGACTGACAAATGACGTGGCTTCTGTTGCCCCACGGGAAGTTGGTTCCCATAGCAAAGAGATAGCAGTTGGCACTTTTGAAAGATCTGTTGTCGAACAGGTGCGTTCCAATGATCTTAAGACAATGGAGCTTGGCCTTGCAATGAGGAAATTAAAGTTGAAAGAGACACAGATCGCACTCAATTATGACTTAAACAATCTTGAGAGGTCAAAATTGGCAATGGGCATATCAAAAGCCTCTTTTAAGGCTGAGAAGTTCAAGAGTCAGTTAGAAGAAACGAGACATTCGGAACTGCTTAAAAAGTGCATAGACTGTCTTGTTGCTGGTTTGCTTATAATGTCCATGGCCCTCTCTTACGGCGCATATGTTTATTCATATCATAGAATTTCTGAAGCTACTGCAACCTGCACTCCTTCAACCCAGGCAAGTGAATCAAAATCTTGGTGGATGCCAAGTCCTATGGCATCTTTGAACTCCGGATGGCATATGTTAAGGTGTCAAGTTCAAGTTGTTAGCCGGATGGTGTTCGGTGTGATTATGATTGTTGCAGTTGCTTACTTGCTTCTCCAACGCTCATCAACTTCAAACCAGGCAATGCCAGTTACTTTCATCGTCTTGCTGCTCGGATTTGTCTGCGGTTTAGCTGGGAAGTTATGCATCGACACACTGGGAGGAAGCGGATTTCATTGGCTTGTGGTCTGGGAAACATTGTGCTTATTGCACTTATTTGCAAACATTTTTACGTCTGCACTGTTTCTGATCCTACACGGTCCAATTGAGGTTTCTCGGGGGAAAAATCGCTACACGATTTTGCCATATTGGTTTCGCCGTGCTGTATTCTACTCCCTTCTGCTTGTGTTTATGCCATTGTTATGTGGGCTAATTCCATTTGCAGGTATTAGTGAATGGAAAGAGCATTTTTGTCTTCTGGTAACTGAAATGATTGCAGCAGACGACTACTGAAGCTTTGGGTTCGAGTCGAATTGCATTTTGTTCTGTAGTATAATCCAATTAATTGGGTTACTTATTATGTATTAGTTTTTATAGGAGCCCCAAAAGGAGATGGCTTTGGAGTTAAACTGCTAATTTATGTTATTATTATTAATGTATGAATAATAATGATAACTACAGTACGTTGAGCCACTATTTTGCTTCACTCTTTCCTCTTGATTTTTACACTT ATGTCATTTGAAGAAGGCTTCAAAAGGAAGACAGAGGGAGAGAATAAAAAAAAGAAAAAGGGAACGTTCAAATCATACGCTTCGTCTCGCAGTCGGCTTGGTATCGACGCAGTCCATGGTAAGTTGGTAACCGAGCGTCTGCATTCTGCCATGGACGAACCCCCTATTTGTGCAACCAGTTGCAGCGCCTTGGCTGAAGAAATCACCGACAACGATCGCGAAGAAATCACGGCGGTTGATTCATCTCCGGGGAACTCAACCCGGACGCTTTACGACCCTCCGCCGTGCTCAAATCGTAATAGGAAGAAGAAGAAGAAGAAGAAAAAAAGGGTTGTCATTGATAACGTCCAAGAACTTCCTTCTTCGTCGTCTTCTTGTTCTTCGCCCGCCAGATTGTTGCAGAGAGGCGTCAATTGCAAACGCCGACGCCCCAAGGTTCTAATTGCTCAATCGCGGCGTATCGATGGCGATTTTGAAAATGTGGCGCTTTTATTGGGAATGTCATTCGCAGCTTTTGTTGCTCAGGTGCTTGAGAGGCAGGACATGTCTGATGGAAGGATGCCCGTTGATCATCTCTCAGTGCAATATTCATTAATGAATACTAAGAATAATCTTTACAAATTAAGCAGGGTCTCAATGAATATTTTAACTTCTTTGCCTCATAATTCCCACAATGTAGCCATAGGTGTGACGTTAATCTTGATTCGCTTCCATATGATGCAAGATCATCTTTTCTACCTGCAGATATGCACTTCGGCTATAAGAGAATCTTTGGTCAATGTTGTCGGGGACAAGCTTGATTGGTTTTTAAAGAAATTTGAGAAGTCATTTGGCAGCACGTTAAGAACTCTTAGATCAATCAGTGAAGCATCTGCAAGAACTGGAGTGTATTCCTCCAAGAAACGCAGGGAAGAAAAAATCACAGTAGATCTGACCCTTGATAGGAAAAGGGATGTGACAAGTAGCTCTAGTCTGGAAGAATGTATCTTGGAAGAATCTTCTAGTACAGGCGGACCTGTTGATCAATTAGGTTTAATTGAAGATATGAAGGAAAGCGTTTCTGAATCATTTACTCGTGAGTTGGCTTTGTGTAGACTGACAAATGACGTGGCTTCTGTTGCCCCACGGGAAGTTGGTTCCCATAGCAAAGAGATAGCAGTTGGCACTTTTGAAAGATCTGTTGTCGAACAGGTGCGTTCCAATGATCTTAAGACAATGGAGCTTGGCCTTGCAATGAGGAAATTAAAGTTGAAAGAGACACAGATCGCACTCAATTATGACTTAAACAATCTTGAGAGGTCAAAATTGGCAATGGGCATATCAAAAGCCTCTTTTAAGGCTGAGAAGTTCAAGAGTCAGTTAGAAGAAACGAGACATTCGGAACTGCTTAAAAAGTGCATAGACTGTCTTGTTGCTGGTTTGCTTATAATGTCCATGGCCCTCTCTTACGGCGCATATGTTTATTCATATCATAGAATTTCTGAAGCTACTGCAACCTGCACTCCTTCAACCCAGGCAAGTGAATCAAAATCTTGGTGGATGCCAAGTCCTATGGCATCTTTGAACTCCGGATGGCATATGTTAAGGTGTCAAGTTCAAGTTGTTAGCCGGATGGTGTTCGGTGTGATTATGATTGTTGCAGTTGCTTACTTGCTTCTCCAACGCTCATCAACTTCAAACCAGGCAATGCCAGTTACTTTCATCGTCTTGCTGCTCGGATTTGTCTGCGGTTTAGCTGGGAAGTTATGCATCGACACACTGGGAGGAAGCGGATTTCATTGGCTTGTGGTCTGGGAAACATTGTGCTTATTGCACTTATTTGCAAACATTTTTACGTCTGCACTGTTTCTGATCCTACACGGTCCAATTGAGGTTTCTCGGGGGAAAAATCGCTACACGATTTTGCCATATTGGTTTCGCCGTGCTGTATTCTACTCCCTTCTGCTTGTGTTTATGCCATTGTTATGTGGGCTAATTCCATTTGCAGGTATTAGTGAATGGAAAGAGCATTTTTGTCTTCTGGTAACTGAAATGATTGCAGCAGACGACTACTGA MSFEEGFKRKTEGENKKKKKGTFKSYASSRSRLGIDAVHGKLVTERLHSAMDEPPICATSCSALAEEITDNDREEITAVDSSPGNSTRTLYDPPPCSNRNRKKKKKKKKRVVIDNVQELPSSSSSCSSPARLLQRGVNCKRRRPKVLIAQSRRIDGDFENVALLLGMSFAAFVAQVLERQDMSDGRMPVDHLSVQYSLMNTKNNLYKLSRVSMNILTSLPHNSHNVAIGVTLILIRFHMMQDHLFYLQICTSAIRESLVNVVGDKLDWFLKKFEKSFGSTLRTLRSISEASARTGVYSSKKRREEKITVDLTLDRKRDVTSSSSLEECILEESSSTGGPVDQLGLIEDMKESVSESFTRELALCRLTNDVASVAPREVGSHSKEIAVGTFERSVVEQVRSNDLKTMELGLAMRKLKLKETQIALNYDLNNLERSKLAMGISKASFKAEKFKSQLEETRHSELLKKCIDCLVAGLLIMSMALSYGAYVYSYHRISEATATCTPSTQASESKSWWMPSPMASLNSGWHMLRCQVQVVSRMVFGVIMIVAVAYLLLQRSSTSNQAMPVTFIVLLLGFVCGLAGKLCIDTLGGSGFHWLVVWETLCLLHLFANIFTSALFLILHGPIEVSRGKNRYTILPYWFRRAVFYSLLLVFMPLLCGLIPFAGISEWKEHFCLLVTEMIAADDY
BLAST of Lsi01G007060 vs. Swiss-Prot
Match: CPR5_ARATH (Protein CPR-5 OS=Arabidopsis thaliana GN=CPR5 PE=1 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 7.3e-76 Identity = 166/426 (38.97%), Postives = 256/426 (60.09%), Query Frame = 1
BLAST of Lsi01G007060 vs. TrEMBL
Match: A0A0A0KM29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501900 PE=4 SV=1) HSP 1 Score: 698.7 bits (1802), Expect = 6.8e-198 Identity = 362/446 (81.17%), Postives = 396/446 (88.79%), Query Frame = 1
BLAST of Lsi01G007060 vs. TrEMBL
Match: A0A061DQP7_THECC (CPR-5, putative OS=Theobroma cacao GN=TCM_001231 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-132 Identity = 250/434 (57.60%), Postives = 323/434 (74.42%), Query Frame = 1
BLAST of Lsi01G007060 vs. TrEMBL
Match: F6H4A2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01470 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.2e-130 Identity = 260/455 (57.14%), Postives = 337/455 (74.07%), Query Frame = 1
BLAST of Lsi01G007060 vs. TrEMBL
Match: A0A0B0NSK7_GOSAR (Protein CPR-5-like protein OS=Gossypium arboreum GN=F383_01226 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 1.8e-129 Identity = 250/430 (58.14%), Postives = 318/430 (73.95%), Query Frame = 1
BLAST of Lsi01G007060 vs. TrEMBL
Match: A0A0D2MJ78_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G046500 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 4.0e-129 Identity = 250/430 (58.14%), Postives = 321/430 (74.65%), Query Frame = 1
BLAST of Lsi01G007060 vs. TAIR10
Match: AT5G64930.1 (AT5G64930.1 CPR5 protein, putative) HSP 1 Score: 286.6 bits (732), Expect = 4.1e-77 Identity = 166/426 (38.97%), Postives = 256/426 (60.09%), Query Frame = 1
BLAST of Lsi01G007060 vs. NCBI nr
Match: gi|659080230|ref|XP_008440680.1| (PREDICTED: protein CPR-5-like [Cucumis melo]) HSP 1 Score: 719.2 bits (1855), Expect = 7.0e-204 Identity = 374/446 (83.86%), Postives = 401/446 (89.91%), Query Frame = 1
BLAST of Lsi01G007060 vs. NCBI nr
Match: gi|778719342|ref|XP_004143575.2| (PREDICTED: protein CPR-5-like [Cucumis sativus]) HSP 1 Score: 698.7 bits (1802), Expect = 9.8e-198 Identity = 362/446 (81.17%), Postives = 396/446 (88.79%), Query Frame = 1
BLAST of Lsi01G007060 vs. NCBI nr
Match: gi|700193597|gb|KGN48801.1| (hypothetical protein Csa_6G501900 [Cucumis sativus]) HSP 1 Score: 698.7 bits (1802), Expect = 9.8e-198 Identity = 362/446 (81.17%), Postives = 396/446 (88.79%), Query Frame = 1
BLAST of Lsi01G007060 vs. NCBI nr
Match: gi|659080228|ref|XP_008440679.1| (PREDICTED: protein CPR-5-like [Cucumis melo]) HSP 1 Score: 527.3 bits (1357), Expect = 3.9e-146 Identity = 290/446 (65.02%), Postives = 336/446 (75.34%), Query Frame = 1
BLAST of Lsi01G007060 vs. NCBI nr
Match: gi|645280069|ref|XP_008245020.1| (PREDICTED: protein CPR-5-like [Prunus mume]) HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135 Identity = 258/442 (58.37%), Postives = 327/442 (73.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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