Lsi01G006240 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G006240
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 5034357 .. 5035014 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGAGAAAGGGGTTGTGGGGTTCTTTTGGTTCTTGGAATTGTGTTGAGCACTTACTTGGTTGAGGGTAAGGGGGTGAAGAGTTTTGAAAAAAGTGAGTCTTGGTACTACATCCAATCAATGGTCTAATTTGGATCAAACCCTCTTTGGAGTTGGTGTAACCGGAAGAAATGTGACTGTTACCGCCGGCAAGGGTGGAGGAAGTTCATCCCGTGAAGGCGGCGGCGGCGGTGGTGGTGGAGGAGTAGGGGAAAGTGGTGGTGGTGGGGTAAGAAAGAAAGATACAAAACATAATAAAAAGCATGGAAAAAGCGGGAATGGCGGCGGGGCAGGTGGCGGAGGCGGCAATGGCGGGGGCGGAGGCGGTGGAGGTGGAAAGGGCGGTGGTGGAGGTGGAGGTGGAGGGGGAAATGGAAAAGGCTATGGATGGGGAGAGGGCAGTGGAGGTGGTGGCGGCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGTGGAGGTGGTGGCGGTGGAGGAGGAGGAAGTGGTGGAGGTGGAGGTGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGGGGTTTTTGTTGGATTTGGGGATGCGGCGGCGGCGGTCATGGAAAAGCATTGGGTAGAAGAGGAGGTCCCTCAAATTAA

mRNA sequence

ATGGAGAGAGAAAGGGGTTGTGGGGTTCTTTTGGTTCTTGGAATTGTGTTGAGCACTTACTTGGTTGAGGTTGGTGTAACCGGAAGAAATGTGACTGTTACCGCCGGCAAGGGTGGAGGAAGTTCATCCCGTGAAGGCGGCGGCGGCGGTGGTGGTGGAGGAGTAGGGGAAAGTGGTGGTGGTGGGGTAAGAAAGAAAGATACAAAACATAATAAAAAGCATGGAAAAAGCGGGAATGGCGGCGGGGCAGGTGGCGGAGGCGGCAATGGCGGGGGCGGAGGCGGTGGAGGTGGAAAGGGCGGTGGTGGAGGTGGAGGTGGAGGGGGAAATGGAAAAGGCTATGGATGGGGAGAGGGCAGTGGAGGTGGTGGCGGCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGTGGAGGTGGTGGCGGTGGAGGAGGAGGAAGTGGTGGAGGTGGAGGTGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGGGGTTTTTGTTGGATTTGGGGATGCGGCGGCGGCGGTCATGGAAAAGCATTGGGTAGAAGAGGAGGTCCCTCAAATTAA

Coding sequence (CDS)

ATGGAGAGAGAAAGGGGTTGTGGGGTTCTTTTGGTTCTTGGAATTGTGTTGAGCACTTACTTGGTTGAGGTTGGTGTAACCGGAAGAAATGTGACTGTTACCGCCGGCAAGGGTGGAGGAAGTTCATCCCGTGAAGGCGGCGGCGGCGGTGGTGGTGGAGGAGTAGGGGAAAGTGGTGGTGGTGGGGTAAGAAAGAAAGATACAAAACATAATAAAAAGCATGGAAAAAGCGGGAATGGCGGCGGGGCAGGTGGCGGAGGCGGCAATGGCGGGGGCGGAGGCGGTGGAGGTGGAAAGGGCGGTGGTGGAGGTGGAGGTGGAGGGGGAAATGGAAAAGGCTATGGATGGGGAGAGGGCAGTGGAGGTGGTGGCGGCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGTGGAGGTGGTGGCGGTGGAGGAGGAGGAAGTGGTGGAGGTGGAGGTGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGGGGTTTTTGTTGGATTTGGGGATGCGGCGGCGGCGGTCATGGAAAAGCATTGGGTAGAAGAGGAGGTCCCTCAAATTAA

Protein sequence

MERERGCGVLLVLGIVLSTYLVEVGVTGRNVTVTAGKGGGSSSREGGGGGGGGGVGESGGGGVRKKDTKHNKKHGKSGNGGGAGGGGGNGGGGGGGGGKGGGGGGGGGGNGKGYGWGEGSGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGSGGGWGFGGGGSRGFCWIWGCGGGGHGKALGRRGGPSN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G006240.1Lsi01G006240.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 123..133
score: 6.2E-7coord: 98..113
score: 6.2E-7coord: 38..49
score: 6.2E-7coord: 147..165
score: 6.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G006240Bottle gourd (USVL1VR-Ls)lsilsiB032
Lsi01G006240Bottle gourd (USVL1VR-Ls)lsilsiB078
Lsi01G006240Bottle gourd (USVL1VR-Ls)lsilsiB082
Lsi01G006240Bottle gourd (USVL1VR-Ls)lsilsiB085
Lsi01G006240Cucumber (Gy14) v1cgylsiB022
Lsi01G006240Cucumber (Gy14) v1cgylsiB547
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB013
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB163
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB305
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB407
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB565
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB597
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB720
Lsi01G006240Cucurbita maxima (Rimu)cmalsiB786
Lsi01G006240Cucurbita moschata (Rifu)cmolsiB001
Lsi01G006240Cucurbita moschata (Rifu)cmolsiB152
Lsi01G006240Cucurbita moschata (Rifu)cmolsiB292
Lsi01G006240Cucurbita moschata (Rifu)cmolsiB393
Lsi01G006240Cucurbita moschata (Rifu)cmolsiB582
Lsi01G006240Cucurbita moschata (Rifu)cmolsiB710
Lsi01G006240Cucurbita moschata (Rifu)cmolsiB774
Lsi01G006240Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G006240Cucurbita pepo (Zucchini)cpelsiB237
Lsi01G006240Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G006240Cucurbita pepo (Zucchini)cpelsiB439
Lsi01G006240Cucurbita pepo (Zucchini)cpelsiB665
Lsi01G006240Wild cucumber (PI 183967)cpilsiB107
Lsi01G006240Wild cucumber (PI 183967)cpilsiB170
Lsi01G006240Wild cucumber (PI 183967)cpilsiB252
Lsi01G006240Wild cucumber (PI 183967)cpilsiB439
Lsi01G006240Cucumber (Chinese Long) v2culsiB109
Lsi01G006240Cucumber (Chinese Long) v2culsiB171
Lsi01G006240Cucumber (Chinese Long) v2culsiB253
Lsi01G006240Cucumber (Chinese Long) v2culsiB434
Lsi01G006240Melon (DHL92) v3.5.1lsimeB132
Lsi01G006240Melon (DHL92) v3.5.1lsimeB142
Lsi01G006240Melon (DHL92) v3.5.1lsimeB148
Lsi01G006240Melon (DHL92) v3.5.1lsimeB156
Lsi01G006240Watermelon (Charleston Gray)lsiwcgB127
Lsi01G006240Watermelon (Charleston Gray)lsiwcgB150
Lsi01G006240Watermelon (Charleston Gray)lsiwcgB151
Lsi01G006240Watermelon (97103) v1lsiwmB132
Lsi01G006240Watermelon (97103) v1lsiwmB139
Lsi01G006240Watermelon (97103) v1lsiwmB140
Lsi01G006240Watermelon (97103) v1lsiwmB144
Lsi01G006240Watermelon (97103) v1lsiwmB168
Lsi01G006240Cucumber (Gy14) v2cgyblsiB098
Lsi01G006240Cucumber (Gy14) v2cgyblsiB398
Lsi01G006240Melon (DHL92) v3.6.1lsimedB140
Lsi01G006240Melon (DHL92) v3.6.1lsimedB148
Lsi01G006240Melon (DHL92) v3.6.1lsimedB155
Lsi01G006240Melon (DHL92) v3.6.1lsimedB163
Lsi01G006240Silver-seed gourdcarlsiB364
Lsi01G006240Silver-seed gourdcarlsiB693
Lsi01G006240Silver-seed gourdcarlsiB892
Lsi01G006240Cucumber (Chinese Long) v3cuclsiB119
Lsi01G006240Cucumber (Chinese Long) v3cuclsiB187
Lsi01G006240Cucumber (Chinese Long) v3cuclsiB462
Lsi01G006240Watermelon (97103) v2lsiwmbB115
Lsi01G006240Watermelon (97103) v2lsiwmbB144
Lsi01G006240Watermelon (97103) v2lsiwmbB149
Lsi01G006240Wax gourdlsiwgoB168