Lsi01G006230 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G006230
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionZinc finger CCCH domain-containing protein 30
Locationchr01 : 5027254 .. 5031057 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCGTTTCATATACTTCTAGCAATTTACTCACACAACGCCGTCCTTATATATCCCTTTTCCATTCCCGCCGTCACCTCCTCTCAAAATAGCCACTTCTATTCTTCACATCCACCGCAACACTTGGTTCTAGGGTTTTCTTCTTCTTCTCCTCCGTCACATTCATTGATCTTTTTCTTCCCCCTTCCCAGAATCAGAACATTCTAGAATCGAATCGACCTTTTTTACACTCACGTTTTTCGTTTAACGTAAAATCTTCGTCGATCGGTTGTTTGGATTTATGCTTTTAATCTGAAACTTTAGTCGTACTTTTTGGTCTGAGATTTAGAGATGAAGCGGTCGAGGAAATCGAAGAGTGTTTCGTGGGCTCATGATGTTAATCTTTGTCAGGTATAATCGTTGATATCTTCTAATTCGAACTTTCGTTTTCGTTTAAAATCTATATACCTAGAGTTTCTGATTTACTAGATTAGTTAGTTATTAGTAGTAGTCTCAAATTCGTCCTCACCTTTGGTTGGTGAAATCAGAAAACCACAATGGAAAAGAAAAGCCGCATTTAGTTGATGATTTTCTTTTTGATGAATTTGATGGTTATGATTTACATCGTTCTTTTGGGCACGAGGGATATACGACATTCTGTTGCTAATAGGATTGTTGATCTTGAGAACACAAAAATTCAACGAAAATCGTTTGTTGGATGGATTAAATAATTAACATTGTGATTAAAAGCGTTAATATCCACTGGGCTAAATGAATAACAGAATTGCATCATTATGCGGAACTGGTCCAAAGGCAGTCCATTTGAACGATCTCAGAGACGTTCTTTGCTTGTGAAGACCAATGTCGCAACAATAAATTTATGAAATCTCTGAAGATTTAAGTTAAAATATATGATGATCTACAAACAGAGTTGTTAATGAACGAGTACTACAAGAACAATTTATGATCTAAAAAACCCGATTATTTGCAATGCGGAAATTATTATTCTCCACCGAAAAAATTATTGCGATTTTGGAATTACTTCCAAAGGAAAAAGAAGGGGAACTCAACAACGTTCTGCAATTTTATTCGCTCCTAATATGGTCTATAATCTAATTAAATAGCAGTTTTTTTGTAACACTCTATTCCCCTGGAGGATATGGATTTGTTTTTCCCATAAGATGATAAGAGCTATTAAACACGGGCGAAACTAATTTTAGTTATGTGAAACTATCAATACCAGTTATAGCAATTTTAGAGTAACATTCTTGCTCCTTCGTAGACTGCACATCTTGGGTATTACTATTTATTCAATTTGAATTTGAATAGTGAATATGAATACTAGATTAAAAAAACCAACCAATTTCTTGTAAGACTGAATCATACTAGATATAAAAACCAATAGAATTGCATTTTAATGGAGAGCATTTTTGAGCAAATTGATGATGGTCATTCCTACTAAATCCTATAGGCGCTTATCCTGAAATATTCGTTTGTTCTAATCTCTCTCTCTCTCTTTCCTCCCTTATACTTTATAGGCATCTCCTGAAATGTCACTGTGGCTAGATGCCTGTTTTCCACATTGTATGAACATGTTTGTATTTTTTTTCCTCCTGAAACTAGCTTATTGTGGGTCGTTGTCTTGTTGTCTTACAGAGAATTTCAGTGTACTCGGTTATGTGTATGTCCCTTCTTGGGAGACAATTTCTTAATGGGTCTACGCAGGAGAAATTTCTGCAAATTATATTGTAGTGTTATAATTCGATTTTGCATATTATTGAACTGATGTTAGTAATAGAAACTCAATAGTGTAATCGGTTTTGTCGTTGTCATATCTTCCAATGTGGTTGGGAAGAATATTTATCTTTGGTGGTTTTCTCCATCCTTCAGGCTATATAACCCATGCTAATTTATGTACCGCGATATCCTAATTATGGTGAATAATTATGCTTGCTTCTTTTAAATAGGTGAAGTTATTCTCATCAGAGGACTGCCCTTCAAAAGTTGGCCTGACATCTTGTGAACATCTCCAAGCAAAAACCTCCTGGATGTTGCCTCCCCATTCTATTGAGTCTAATGATTGTCCTCCTGGATTCAATAATACTCGCTTGGGAAACCAATTAGCAGATGTATCTGGCATCCCTTTGATTAAGTGGAATTGTCCTCCCAAGGTTAGCTAGCACTATTATACCAATTAGCTTTATATGTTCTCACCAGTGTTTTCTCCATTATAATGTGTCCCTTTGTATATTCATCTGATGACTCTGATGTGTCGAACTGCAACACCATTTCTTTCTCAACAGTTTGTTATGAGTTGCCACTGGCGTGTGGCAGCAGGAGATGAAAGTACAGAGATAGAATCTGAAAATTTTAGGGAAATGAGATTGCTAGAGGCAATTTATCCCCGGGCTTCTGATATTCCTCTTGGGTAATAATTATAAACTAACTCGTTTGAAAGCTTAATGTTTTGAACTTCGGCTCCCAATAATTTCTCACATCTCCTTTTCTTTTCCTGTATAGTGCGAGTGTTTCTATCGAGATCGAAAGTGAAACTTACAATGATAGCCTCACTCCTCTTGTCCCTATCATTCCTATTGAAGAAGACGAATGTGGGGCTATGGAGTTAGATTCAGCTGCCGTTGAAAACTTCTCTACGAGCTCTGTGCAGATGATGGCTAGTTCCAACGTTCAGTTGGAACCTGCAATCGTGAAAAGTTCTGTTGAAACATCATCAGTAGCAGTAGCGTCAGGGGAAAAACCGAGCGAAAAGTTAGTTGATGTTGGTGTGGACGTAGTAGCTGCAGCCTCTGCTGCATTCGCTGTTTTAATGAAAAGCAAGGAGCATGGAAGCTTAATCGACACCAACTTGCTTATTAAGATTTTCAGTGATCCTACAATGATTCAGAATTTGACAAACATTCTTCCTCTATGTGAATTAATCTCTGGGAGTCCACCCACTGCACCAATATCTGTGTCAAAGCCAGCGACTGGATCAATTCCCTTGCCTGTACAGGAATCCAATATGATACCAAAACTCCCAAATGGAAATTTACCGAACGTGTTGAATAGAGTTATATCTTCAGAAACCACTCTTCCTCAGGTGAGTAACATTGCAGCATCTGATGTAAAGCCAGCCTCAGTCCCTGACCGTTCACCTGCACCCAATCTCCAAAAGGTAAAAACTACAATATCGAATGGTGGGAACTGTTCTAACAAACGTACAGTCCCAAGCCAAGCGAATGTAGCACCAGTAAATATGGTGACAAAAGGTCAGACATTGAAGGACGCTAACTACTATAAGAACTTGGTAAGACAACATGGAGACCAGAAAATTGGACTAAATGGCAATAATCACAATCTTCGTAATCTTAATATGGTGCACGAGATGGAAGCAGAAAACTTAAAATCCAAGAATGAGAAATATTGCATTTACTATAACACTCCAAAAGGATGTCGAAATGGCGTTAATTGCCAATACAAACATGATATGTCACATAACTGGCGTACTAACAACATATTGGAGACTCGAAGCACTAAGAGATTGAAATTGTGGGGGTGAAGATGAAGGGGGGACGTAATTGCGTAAATTCTTTACTAAGAATTTGTATTAAGGGTTGGGAGTTTGTATTTTTGGGAGGTGGGAAATGAACTTTAATTTCAACAAGAAAAGATATGAAGACAAAGTTCCTAATTTCAATTGGAAAAATGTTATACTGGTTGATGAGGGATTGTTTCTTGAGTTTAGTTTATATTGATTAGAGAGTGGGGCGACATTGCCTACTTTCTCTACTTTTTACTACTTATCAAATATTTTTTTAGTAAATCG

mRNA sequence

TTTCGTTTCATATACTTCTAGCAATTTACTCACACAACGCCGTCCTTATATATCCCTTTTCCATTCCCGCCGTCACCTCCTCTCAAAATAGCCACTTCTATTCTTCACATCCACCGCAACACTTGGTTCTAGGGTTTTCTTCTTCTTCTCCTCCGTCACATTCATTGATCTTTTTCTTCCCCCTTCCCAGAATCAGAACATTCTAGAATCGAATCGACCTTTTTTACACTCACGTTTTTCGTTTAACGTAAAATCTTCGTCGATCGGTTGTTTGGATTTATGCTTTTAATCTGAAACTTTAGTCGTACTTTTTGGTCTGAGATTTAGAGATGAAGCGGTCGAGGAAATCGAAGAGTGTTTCGTGGGCTCATGATGTTAATCTTTGTCAGGTGAAGTTATTCTCATCAGAGGACTGCCCTTCAAAAGTTGGCCTGACATCTTGTGAACATCTCCAAGCAAAAACCTCCTGGATGTTGCCTCCCCATTCTATTGAGTCTAATGATTGTCCTCCTGGATTCAATAATACTCGCTTGGGAAACCAATTAGCAGATGTATCTGGCATCCCTTTGATTAAGTGGAATTGTCCTCCCAAGTTTGTTATGAGTTGCCACTGGCGTGTGGCAGCAGGAGATGAAAGTACAGAGATAGAATCTGAAAATTTTAGGGAAATGAGATTGCTAGAGGCAATTTATCCCCGGGCTTCTGATATTCCTCTTGGTGCGAGTGTTTCTATCGAGATCGAAAGTGAAACTTACAATGATAGCCTCACTCCTCTTGTCCCTATCATTCCTATTGAAGAAGACGAATGTGGGGCTATGGAGTTAGATTCAGCTGCCGTTGAAAACTTCTCTACGAGCTCTGTGCAGATGATGGCTAGTTCCAACGTTCAGTTGGAACCTGCAATCGTGAAAAGTTCTGTTGAAACATCATCAGTAGCAGTAGCGTCAGGGGAAAAACCGAGCGAAAAGTTAGTTGATGTTGGTGTGGACGTAGTAGCTGCAGCCTCTGCTGCATTCGCTGTTTTAATGAAAAGCAAGGAGCATGGAAGCTTAATCGACACCAACTTGCTTATTAAGATTTTCAGTGATCCTACAATGATTCAGAATTTGACAAACATTCTTCCTCTATGTGAATTAATCTCTGGGAGTCCACCCACTGCACCAATATCTGTGTCAAAGCCAGCGACTGGATCAATTCCCTTGCCTGTACAGGAATCCAATATGATACCAAAACTCCCAAATGGAAATTTACCGAACGTGTTGAATAGAGTTATATCTTCAGAAACCACTCTTCCTCAGGTGAGTAACATTGCAGCATCTGATGTAAAGCCAGCCTCAGTCCCTGACCGTTCACCTGCACCCAATCTCCAAAAGGTAAAAACTACAATATCGAATGGTGGGAACTGTTCTAACAAACGTACAGTCCCAAGCCAAGCGAATGTAGCACCAGTAAATATGGTGACAAAAGGTCAGACATTGAAGGACGCTAACTACTATAAGAACTTGGTAAGACAACATGGAGACCAGAAAATTGGACTAAATGGCAATAATCACAATCTTCGTAATCTTAATATGGTGCACGAGATGGAAGCAGAAAACTTAAAATCCAAGAATGAGAAATATTGCATTTACTATAACACTCCAAAAGGATGTCGAAATGGCGTTAATTGCCAATACAAACATGATATGTCACATAACTGGCGTACTAACAACATATTGGAGACTCGAAGCACTAAGAGATTGAAATTGTGGGGGTGAAGATGAAGGGGGGACGTAATTGCGTAAATTCTTTACTAAGAATTTGTATTAAGGGTTGGGAGTTTGTATTTTTGGGAGGTGGGAAATGAACTTTAATTTCAACAAGAAAAGATATGAAGACAAAGTTCCTAATTTCAATTGGAAAAATGTTATACTGGTTGATGAGGGATTGTTTCTTGAGTTTAGTTTATATTGATTAGAGAGTGGGGCGACATTGCCTACTTTCTCTACTTTTTACTACTTATCAAATATTTTTTTAGTAAATCG

Coding sequence (CDS)

ATGAAGCGGTCGAGGAAATCGAAGAGTGTTTCGTGGGCTCATGATGTTAATCTTTGTCAGGTGAAGTTATTCTCATCAGAGGACTGCCCTTCAAAAGTTGGCCTGACATCTTGTGAACATCTCCAAGCAAAAACCTCCTGGATGTTGCCTCCCCATTCTATTGAGTCTAATGATTGTCCTCCTGGATTCAATAATACTCGCTTGGGAAACCAATTAGCAGATGTATCTGGCATCCCTTTGATTAAGTGGAATTGTCCTCCCAAGTTTGTTATGAGTTGCCACTGGCGTGTGGCAGCAGGAGATGAAAGTACAGAGATAGAATCTGAAAATTTTAGGGAAATGAGATTGCTAGAGGCAATTTATCCCCGGGCTTCTGATATTCCTCTTGGTGCGAGTGTTTCTATCGAGATCGAAAGTGAAACTTACAATGATAGCCTCACTCCTCTTGTCCCTATCATTCCTATTGAAGAAGACGAATGTGGGGCTATGGAGTTAGATTCAGCTGCCGTTGAAAACTTCTCTACGAGCTCTGTGCAGATGATGGCTAGTTCCAACGTTCAGTTGGAACCTGCAATCGTGAAAAGTTCTGTTGAAACATCATCAGTAGCAGTAGCGTCAGGGGAAAAACCGAGCGAAAAGTTAGTTGATGTTGGTGTGGACGTAGTAGCTGCAGCCTCTGCTGCATTCGCTGTTTTAATGAAAAGCAAGGAGCATGGAAGCTTAATCGACACCAACTTGCTTATTAAGATTTTCAGTGATCCTACAATGATTCAGAATTTGACAAACATTCTTCCTCTATGTGAATTAATCTCTGGGAGTCCACCCACTGCACCAATATCTGTGTCAAAGCCAGCGACTGGATCAATTCCCTTGCCTGTACAGGAATCCAATATGATACCAAAACTCCCAAATGGAAATTTACCGAACGTGTTGAATAGAGTTATATCTTCAGAAACCACTCTTCCTCAGGTGAGTAACATTGCAGCATCTGATGTAAAGCCAGCCTCAGTCCCTGACCGTTCACCTGCACCCAATCTCCAAAAGGTAAAAACTACAATATCGAATGGTGGGAACTGTTCTAACAAACGTACAGTCCCAAGCCAAGCGAATGTAGCACCAGTAAATATGGTGACAAAAGGTCAGACATTGAAGGACGCTAACTACTATAAGAACTTGGTAAGACAACATGGAGACCAGAAAATTGGACTAAATGGCAATAATCACAATCTTCGTAATCTTAATATGGTGCACGAGATGGAAGCAGAAAACTTAAAATCCAAGAATGAGAAATATTGCATTTACTATAACACTCCAAAAGGATGTCGAAATGGCGTTAATTGCCAATACAAACATGATATGTCACATAACTGGCGTACTAACAACATATTGGAGACTCGAAGCACTAAGAGATTGAAATTGTGGGGGTGA

Protein sequence

MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCPPGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAIYPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQMMASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGSLIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPTAPISVSKPATGSIPLPVQESNMIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNGGNCSNKRTVPSQANVAPVNMVTKGQTLKDANYYKNLVRQHGDQKIGLNGNNHNLRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMSHNWRTNNILETRSTKRLKLWG
Homology
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BLAST of Lsi01G006230 vs. Swiss-Prot
Match: C3H30_ORYSJ (Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN=Os04g0663200 PE=2 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-47
Identity = 168/513 (32.75%), Postives = 249/513 (48.54%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDC- 60
           M  SR+S+ VSWA   NLC+V+LF SED PS+ GL   ++LQAK SW+L      S+D  
Sbjct: 1   MMGSRRSRRVSWASGGNLCKVRLFLSEDSPSQAGLRPQDNLQAKGSWLLHAAGPSSDDSL 60

Query: 61  PPGFNNTRLGNQLA-DVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLE 120
           PPGF +    N L  D+S IPLI+W CPP  V+   W + AG+ES EIE +N R    LE
Sbjct: 61  PPGFESLPPSNDLKIDMSQIPLIRWKCPPHIVLEQDWHIVAGEESREIEIQNERINGALE 120

Query: 121 AIYPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSV 180
           AIYPR S+IP    +S++++   Y+DS T LVP+IP+E+D+    +L+   ++  S  ++
Sbjct: 121 AIYPRPSNIPPNPFLSLDVKDAHYDDSKTLLVPLIPLEDDDASD-QLEGPTLDLPSHYNI 180

Query: 181 QMMASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKS--- 240
             ++++ V  E             A++SG           ++  AA SA    +M++   
Sbjct: 181 TGVSNTPVSAEQQ------PPCGGAISSG---------FTIEPQAAVSATVTAIMQTIQS 240

Query: 241 -------KEHGSLIDTNLLIKIFSDPTMIQNLTNILPLC-----ELISGSPPTAP-ISVS 300
                   ++GS ID  LL KI SDP+ +Q L   +  C     E  + S   AP +S+ 
Sbjct: 241 NQNGSMADQNGSTIDQELLFKILSDPSQLQRL---MKECGPVRHEQSASSSVVAPLVSIP 300

Query: 301 KPA-TGSIPLPVQES-----NMIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPAS 360
            P  T S P P  +       M P LP    P ++NR  S   T+P V    A +  P+S
Sbjct: 301 PPQITASSPAPFSDHVGTFHGMNPTLPPP--PPMMNRPPS---TIPSV----AMNHPPSS 360

Query: 361 VPDRSPAPNLQKVKTTISNGGNCSNKRTVPSQANVAPVNMVTKGQTLKDANYYKNLVRQH 420
               SPA N      + S   N  +   VP +                   YYK L+ QH
Sbjct: 361 ----SPAMNFGSALPSSSPSVNFGS---VPGRG----------------VGYYKTLIHQH 420

Query: 421 GDQKIGLNGNNHNLR----------------NLNMVHEMEAENLKSKNEKYCIYYNTPKG 474
           G +++      H ++                 +N    M + + K +  K C Y+N+PKG
Sbjct: 421 GGERLEQPFEQHGMQFGMYRQPGPPQNGGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKG 461

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BLAST of Lsi01G006230 vs. Swiss-Prot
Match: C3H6_ARATH (Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana GN=At1g19860 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-45
Identity = 153/474 (32.28%), Postives = 225/474 (47.47%), Query Frame = 1 

Query: 8   KSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCPPGFNNTR 67
           K VSW  D  LCQV+LF SED PS+VG  S +HLQAK+   L  H  + N  PPGF    
Sbjct: 6   KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSP--LASHPSDDN-LPPGFGGPF 65

Query: 68  LGNQLA-DVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAIYPRASD 127
             N+    +S IPLIKW C  + ++   W+V AGDES E+E++N RE+R+LEA YP AS 
Sbjct: 66  SANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAFYPGASS 125

Query: 128 IPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQMMASSNV 187
           IP   SV  ++E   ++D  T ++PI+P+E+D+   + +DSA+  +F T S       +V
Sbjct: 126 IPPNPSVPADVEDSHHDDQQTIVIPILPVEDDD---IAMDSAS--DFPTQS-----GVDV 185

Query: 188 QLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGSLIDTNL 247
             EP+I   +  TSS   A            G D++AA SA    +  SKE GS+ID +L
Sbjct: 186 GTEPSITDENTSTSSTLPA------------GPDIMAALSA----ISNSKEQGSMIDQDL 245

Query: 248 LIKIFSDPTMIQNLTNILPLCELISGSPPTAPISVSKPATGSIPLPVQESNMIPKLPNGN 307
           LIKI S+P +++NL         +S +  +   S +  A G +                 
Sbjct: 246 LIKILSNPKLVENLVANRGSAGSVSSNTSSLYSSSTHEANGVVT---------------T 305

Query: 308 LPNVLNRVISSETTLPQVSNIAASDVKPASVPD--RSPAPNLQKVKTTISNGGNCSNKRT 367
            P   N    ++  +  +  +A +   P   P+    PA +    K  I   G    + T
Sbjct: 306 APISSNGQFYAQPPITHIPPMAYTPHAPQDQPNYGAPPARDASYYKNLIQQHGG-DRQET 365

Query: 368 VPSQANVAPVNMVTKGQTLKDANYYKNLVRQHGDQKIGLNGNNHNLRNLNMVHEMEAENL 427
            P Q                   Y  NL    G     +N +N+N R           + 
Sbjct: 366 PPVQ----------------HLGYRYNLQPGGGPNPEMVNSSNNNQR---------PRDS 409

Query: 428 KSKNEKYCIYYNTPKGCRNGVNCQYKHDMS----HNWRTNNI--LETRSTKRLK 473
           K K  K C+Y+N+ +GCR+G NC Y+HD +     N    NI   + ++ KR++
Sbjct: 426 KPKIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNINTSDMQNAKRMR 409

[Close]
BLAST of Lsi01G006230 vs. Swiss-Prot
Match: C3H45_ARATH (Zinc finger CCCH domain-containing protein 45 OS=Arabidopsis thaliana GN=At3g51180 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.8e-34
Identity = 104/264 (39.39%), Postives = 140/264 (53.03%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRS+K + VSW     LCQVK+F +ED P+ V      H         P       D P
Sbjct: 4   MKRSKKPR-VSWPPGPKLCQVKVFRTEDSPANVASQPQRH-------SYPSRKPRGPDLP 63

Query: 61  PGFNNTRLGNQLA---DVSGIPLIKWNCPP-KFVMSCHWRVAAGDESTEIESENFREMRL 120
           PGF     GN  A   +VS IP IKW  PP KF ++  W V  G  S+E ++EN R  ++
Sbjct: 64  PGFE----GNHYAVKPNVSNIPRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKV 123

Query: 121 LEAIYPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTS 180
           LEAIYP  S IP   SVS  +E+E ++DS TP + + PIE++         ++ E  S S
Sbjct: 124 LEAIYPHRSAIPSRPSVSPAVEAECFDDSKTPAIRLTPIEDE-------SESSSEESSNS 183

Query: 181 SVQMMASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSK 240
            V+   ++N Q         +ET    + S ++    L  +  D+  AASAA   LMK+K
Sbjct: 184 KVESGVTANKQ-------GQLETK--PLCSTQEQVSGLTGLAPDLSLAASAALTALMKTK 239

Query: 241 EHGSLIDTNLLIKIFSDPTMIQNL 261
           E GSL+DT LLIK  SDP +I+NL
Sbjct: 244 EQGSLVDTELLIKFLSDPKLIKNL 239

[Close]
BLAST of Lsi01G006230 vs. Swiss-Prot
Match: C3H68_ARATH (Zinc finger CCCH domain-containing protein 68 OS=Arabidopsis thaliana GN=At5g66270 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.2e-31
Identity = 146/503 (29.03%), Postives = 214/503 (42.54%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MK+++K + VSWA D  LCQVKLF S+DCP KV                      +++ P
Sbjct: 2   MKKTKKGR-VSWASDSMLCQVKLFLSDDCPVKV----------------------ASNLP 61

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGF  T    +   +S IP IKW  PP FV+     V +G +S E  SEN R  ++LEA 
Sbjct: 62  PGFEATDYATKRI-ISHIPRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLEAF 121

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YP  S IP                SLT     + +EE+       D     N   + V+ 
Sbjct: 122 YPHRSVIPS-------------RPSLT-----LAVEEEH-----YDDGKTPNIPLTHVE- 181

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
                     A  +SS    + A  SG  P   L+         ASAA + L  +KE GS
Sbjct: 182 ------DERDAAAESSHSFEAPAAVSGLGPELSLL---------ASAALSAL--TKEQGS 241

Query: 241 LIDTNLLIKIFSDPTMIQNLTNIL---PL----------------------CELISGSPP 300
            +D +LL+K+ SDP +++NL N +   PL                         +  +PP
Sbjct: 242 QVDPDLLVKLLSDPKIVENLINGMKGKPLETANNSLNTDITEPRLAPQHVTSTTMDRNPP 301

Query: 301 TAPISVSKPATGSIPLPVQESNMIPKLPNGNLP--NVLNRVISSETTLPQVSNI------ 360
             P +V   A  ++P+ VQ S   P LP  N P  + L+  ++ +   P V N       
Sbjct: 302 PMPGNV---APHNVPVSVQSSATDPPLPKPNQPMSSALSMNLTLQKPTPVVHNYPLSSGI 361

Query: 361 ------AASDVKPASVPDRSPAPNLQKVKTTISNGGNCSNKRTVPSQANVAPVNMVTKGQ 420
                  A+ +KP++  D      + + KT +    +  N   VP  A       +  G 
Sbjct: 362 KVEDSYTAAPLKPSTGDDVV----VSEQKTQLLFPCSSWNMNKVPESARTETDPQIRNGN 421

Query: 421 T----------LKDANYYKNLVRQHGDQKIGLNGNNHNLRNLNMVHEMEAENLKSKNEKY 455
           T          +KD +Y+KNL+R+HG  K      N+    ++       + +K + +K 
Sbjct: 422 TNRDDQVSAKPVKDLDYFKNLIREHGAVKPATTETNNYKGRVD-----HKKIVKVRIQKP 427

[Close]
BLAST of Lsi01G006230 vs. TrEMBL
Match: A0A0A0KMC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504710 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 6.8e-205
Identity = 381/485 (78.56%), Postives = 412/485 (84.95%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSRKSK VSW HD+NLCQVKLFSSE+CPSKVGL SCEHLQAKTSWMLP H+ E N CP
Sbjct: 1   MKRSRKSKCVSWPHDLNLCQVKLFSSEECPSKVGLKSCEHLQAKTSWMLPAHTKEPN-CP 60

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGFN T L NQL D+SGIPLIKWNCPPKFVMSCHWRV AGDESTEI+++NFREMRLLEAI
Sbjct: 61  PGFNITHLRNQLVDISGIPLIKWNCPPKFVMSCHWRVTAGDESTEIKTQNFREMRLLEAI 120

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YPRASDIP GASVS EIESETYNDSLTPLVPIIPIEEDECG M+LDS  V NFST+S QM
Sbjct: 121 YPRASDIPTGASVSTEIESETYNDSLTPLVPIIPIEEDECGVMKLDSGPVGNFSTNSKQM 180

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
           MASSNVQL+PAI KSS+ETSSVA  +GEKPSEKLVDVGVDVVAAASAAFAVLMKSKE GS
Sbjct: 181 MASSNVQLDPAIPKSSIETSSVA--AGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEQGS 240

Query: 241 LIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPT---APISVSKPATGSIPLPVQESN 300
           LIDTNLLIKIFSDPTMIQNLTN LPL EL+S SPPT   APIS+S PAT SI L + ESN
Sbjct: 241 LIDTNLLIKIFSDPTMIQNLTNTLPLFELVSNSPPTAPAAPISMSNPATSSISLSIPESN 300

Query: 301 MIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNGG 360
            IPKL NGNL  V NR +SSETTLPQV+NIAAS+VK  SVP  S AP  QKVKTT+SN G
Sbjct: 301 TIPKLSNGNLSGVSNRDLSSETTLPQVTNIAASNVKADSVPGHSLAPEPQKVKTTMSNVG 360

Query: 361 NCSNKRTVPSQANVAPVNMVTKGQTLKDANYYKNLVRQHG-------DQKIGLNGNNHNL 420
           N S    V SQ ++A VNMV KGQ +KDANYYKNLVRQHG       +QKIGLNGNN N 
Sbjct: 361 NYSRTGAVSSQVDIAQVNMVKKGQIVKDANYYKNLVRQHGGDQKDGKEQKIGLNGNNQNE 420

Query: 421 RNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMSHNWRTNNILETRSTKR 476
            NLNMVHEM+AE+LK+KN+KYCIY+N+PKGCRNGVNCQYKHDMS N R N+ILETR  KR
Sbjct: 421 YNLNMVHEMKAEHLKAKNQKYCIYFNSPKGCRNGVNCQYKHDMSQNMRINHILETRGAKR 480

[Close]
BLAST of Lsi01G006230 vs. TrEMBL
Match: A0A0A0KGM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505290 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 3.5e-132
Identity = 278/489 (56.85%), Postives = 335/489 (68.51%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSRKSK VSWAH VNLCQVKLFSSEDCPS+VGL S + LQAKT WML P++ E NDCP
Sbjct: 1   MKRSRKSKGVSWAHGVNLCQVKLFSSEDCPSRVGLKSPDQLQAKTPWMLHPYTAEINDCP 60

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGF  T LGNQLAD+S IPL+KW  P KF M+ +WRV AG+ES E+ES+ FREMR LEA+
Sbjct: 61  PGFEVTPLGNQLADLSRIPLVKWKRPLKFGMNPNWRVGAGEESEEVESQKFREMRFLEAV 120

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YPRAS IP GA+VS +I+ E Y+DSLTPLVPIIP+EEDEC  +  DSA V NFSTSS+ M
Sbjct: 121 YPRASAIPPGATVSSDIQDEFYDDSLTPLVPIIPVEEDECEDLGSDSAIVGNFSTSSLPM 180

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
             +S+  LEP++   ++ETS+V     EKP EKL DVGVDV  AAS A+AVL KS E GS
Sbjct: 181 --ASHFHLEPSV--RTIETSAV-----EKPIEKLPDVGVDVAVAASTAYAVLTKSMEQGS 240

Query: 241 LIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPT----APISVSKPATGSIPLPVQES 300
           +IDTNLLIKIFSDP MIQNL+NI PL   + G+PP     APIS+SK        PV ES
Sbjct: 241 MIDTNLLIKIFSDPKMIQNLSNIHPLSTAVPGNPPPTSTGAPISLSK--------PVNES 300

Query: 301 NMIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNG 360
           N IP++PNG    V          LPQ S+I   DV    VP   P  +   VK T+ N 
Sbjct: 301 NRIPRVPNGFSSTV-------TAALPQTSSIPTPDVNLVVVPGNLPVQDPNLVKVTLRNA 360

Query: 361 GNCSNKRTVPSQANVAPVNMVTK--GQTLKDANYYKNLVRQHGD------QKIG-LNGNN 420
           GN     ++P+ AN++ V+ V K   Q +KD +YYKNLVR+HGD      QK+G  +GNN
Sbjct: 361 GNYPKLGSIPAHANMSLVSSVRKEAAQQMKDVSYYKNLVREHGDQRDFKKQKLGQQDGNN 420

Query: 421 -HNLRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMSHNWRTNNILETR 476
            +N  NLNM HEM+ ENLK K +K CIY+N  KGCRNG+NCQ+KHD         I+   
Sbjct: 421 IYNHHNLNMAHEMKEENLKPKIQKQCIYFNGSKGCRNGLNCQFKHD---------IILNN 456

[Close]
BLAST of Lsi01G006230 vs. TrEMBL
Match: W9SCT2_9ROSA (Zinc finger CCCH domain-containing protein 30 OS=Morus notabilis GN=L484_026703 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.3e-78
Identity = 204/505 (40.40%), Postives = 279/505 (55.25%), Query Frame = 1 

Query: 2   KRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCPP 61
           KRSRKS  VSWA   +LCQV+LFS+EDCP+KVGL   + LQAKTS +LP      N+ PP
Sbjct: 6   KRSRKSNGVSWAPGADLCQVRLFSAEDCPAKVGLKCQDDLQAKTSGVLPSDPTGYNELPP 65

Query: 62  GFNNTRLGNQLA-DVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 121
           GF      N+   + S +P ++W CPPKFV+S  W VAAG+ES E++ +  REMR+LEA+
Sbjct: 66  GFERGLAVNKSGLEPSYVPQVQWKCPPKFVLSQTWLVAAGEESEEVKHQKLREMRVLEAV 125

Query: 122 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 181
           YPR+S IP  + VS+E E+E Y++S TP+VPI PIE++E       S    + +T+++  
Sbjct: 126 YPRSSAIPHSSYVSLESENEYYDNSRTPIVPITPIEDEEPADTVTPSDVAPSVNTTTISS 185

Query: 182 ---MASSNVQLEPAIVKSSVETSSV-AVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSK 241
               + S V L      S   +S + ++ + + P EKL D G DV+AA SAA A +MKS 
Sbjct: 186 PPPSSLSQVSLPSESHPSKCNSSFLQSLGTSQPPLEKLPDRGADVLAATSAALATIMKSS 245

Query: 242 EHGSLIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPTAP-----------ISVSKPA 301
           E GSLIDT+LLIKIFSDP MI  L N        +G P +AP           IS S+  
Sbjct: 246 EKGSLIDTDLLIKIFSDPKMIGRLMN--------NGQPTSAPSVSTKTTVSASISDSRTV 305

Query: 302 TGSIPLPVQESNM-IPKLPNGNLPNVLNRVISS---ETTLPQVSNIAASDVKPASVPDRS 361
           + S+PLP    ++  P   N   PN L   +++   +   PQVS        P S+    
Sbjct: 306 SPSVPLPSPALDLQRPVDENSFHPNGLRTTVNTTRRQQDAPQVSRFQQVVTPPVSMSTPE 365

Query: 362 PAPNLQKVKTTISNGGNCSNKRTVPSQANVAPVNMVT------KGQTLKDANYYKNLVRQ 421
           P  +L +    + +G   S    V    N A V   T      +   +KD NYYKNL+RQ
Sbjct: 366 PFVSLPR----LPDGNLFSVPNRVRYLVNAASVQPNTAFAVQERAPPVKDVNYYKNLIRQ 425

Query: 422 HG-----DQKIGLNGNNHNLRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYK 476
           HG     ++   L  N  N  +L  V   +    K KN K C Y+ T KGCRNG NC Y+
Sbjct: 426 HGGEHEENKDCVLTQNGKNYFHLG-VQNFKLGQEKPKNSKPCAYFKTSKGCRNGANCPYQ 485

[Close]
BLAST of Lsi01G006230 vs. TrEMBL
Match: A0A067LEC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06505 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 5.4e-77
Identity = 205/513 (39.96%), Postives = 269/513 (52.44%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLP-PHSIESNDC 60
           MKRSRKS  V+WA  VNLCQVKLF +ED PSKVG  + ++LQ K SW+L   ++ E ND 
Sbjct: 1   MKRSRKSNRVTWAAGVNLCQVKLFLTEDSPSKVGTQAQDNLQKKPSWVLHHSNADEFNDL 60

Query: 61  PPGFNNTR-LGNQL-ADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLL 120
           PPGF     L N L  + S IP I+W  PPK V+S  W V AG+ES E +++  REMR+L
Sbjct: 61  PPGFEGCHTLKNPLKVESSLIPTIQWKSPPKLVLSYDWHVGAGEESLEAKAQKLREMRVL 120

Query: 121 EAIYPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSS 180
           EA++PR S IP G S+S++IE E Y+D LTP++P+IPIEE+  G +   SA V N S S 
Sbjct: 121 EAVFPRPSAIPPGPSISLDIEEEYYDDRLTPIIPLIPIEEEAAGEISDSSAPVNNLSKSP 180

Query: 181 VQM------MASSNV-QLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFA 240
             +       A+ N+ +LEP   K            G  P     D G D++AAASAA  
Sbjct: 181 AILPTRLPNSAAHNIPELEPRTSKKRTH--------GVSP-----DTGADLMAAASAAAT 240

Query: 241 VLMKSKEHGSLIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPTAPISVSKPATGS-- 300
            LMKS E GS IDT+LLIKI SDP MI+ L N        +  PP +P   S P  G+  
Sbjct: 241 ALMKSMEDGSQIDTDLLIKILSDPKMIEKLIN--------NKKPPLSP--ASSPTDGNLH 300

Query: 301 --------IPLPVQESNMIPKLPNGNLPNVL-------------NRVISSETTLPQVSNI 360
                   IP PV  S  +P + +  +P  L              R+ S   T P V+N+
Sbjct: 301 NIFAGLKPIPKPVARSTSLPTVLSSPIPGSLQPPSTLSEVQPTGTRMPSQPMTRPVVANL 360

Query: 361 AASD-----VKPASVPDRSPAPNLQKVKTTISNGGNCSNKRTVPSQANVAPVNMVTKGQT 420
             S       +P   P   P PN+                  +P    V PV        
Sbjct: 361 VQSKANSFLAQPVMAP--KPIPNV------------------MPPPLGVMPV-------- 420

Query: 421 LKDANYYKNLVRQHGDQKIGLNGNNHNLRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCR 476
            KD NY KNL+R+HG +K   N N   ++NL     ++    K K +K C+YYNTP+GCR
Sbjct: 421 -KDVNYIKNLIREHGSEKKDQNYN--KIQNLGFAQNLKLREEKPKFQKPCMYYNTPRGCR 459

[Close]
BLAST of Lsi01G006230 vs. TrEMBL
Match: A0A0B0NQ04_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_17713 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-72
Identity = 189/496 (38.10%), Postives = 271/496 (54.64%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSRKS  VSWA  VNLCQVKLF  EDCPSKVG    + +QAK SW   P  + +ND P
Sbjct: 1   MKRSRKSNRVSWAPGVNLCQVKLFLREDCPSKVGGQRQDTIQAKASWTSHPSGMSANDLP 60

Query: 61  PGFNNTRLGNQL-ADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEA 120
           PGF      + L  D++ IP I+W  PPKF ++ +W+VAAG+ES E+E++  RE R+LEA
Sbjct: 61  PGFEGCHYTSALKCDLAKIPRIQWISPPKFALNFNWQVAAGEESKEVEAQKLREKRVLEA 120

Query: 121 IYPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQ 180
           +YPR S IP    VS+ +E E+Y+DS  PLVP+ PIE+DE   +     A +  S S+ +
Sbjct: 121 VYPRISVIPPNP-VSLNVEVESYDDSRIPLVPLTPIEDDEEAEVP-SGIATQAKSPSNFE 180

Query: 181 MMASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHG 240
            +A   +   P +  S         +S     + L  V  DV+ AA AA   ++K+KE G
Sbjct: 181 TVA---LLKHPGLSNSGTHNMPHCPSSAAGAPDMLPGVSSDVMTAALAALTAVVKTKEQG 240

Query: 241 SLIDTNLLIKIFSDPTMIQNLTNIL--PLCELISGSPPTAPISVSKPATGSIPLPVQESN 300
           SL+DT+LL+KI SDP +++ L +    P+     G+  + P+  S+P TG   LP  +  
Sbjct: 241 SLVDTDLLVKILSDPKIVEKLIHDHGHPVAAA-DGNVVSTPVHTSEPETGITSLPCSKPQ 300

Query: 301 MIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNGG 360
           M     + +L      V+S+  +   +  I+      +SVP  S   N+  +    +  G
Sbjct: 301 MPADRNSNHLVKEFRPVLSTPASWADIVPISMPMRVESSVPLTST--NIDMITAHRAANG 360

Query: 361 NC----SNKRTVPSQANVAPVNMVTKGQT-----LKDANYYKNLVRQHGDQKIGLNGNN- 420
           N     +  +  PS   V P    T  QT     +KD NY+KNL+R+HG  K    G+N 
Sbjct: 361 NAYTIMNQVQPSPSMMPVQPAISSTAMQTNAGVAVKDTNYFKNLIREHGRDKEEDKGHNM 420

Query: 421 -------HNLRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHD-MSHNWRT 476
                  ++++NL +V  ++   LK+K  K C+++N+ KGCR G NC Y HD  S  W+T
Sbjct: 421 SQTVSHINHIQNLKVVETLKPVALKTKFRKPCMFFNSSKGCRQGSNCPYLHDNKSLQWQT 480

[Close]
BLAST of Lsi01G006230 vs. TAIR10
Match: AT1G19860.1 (AT1G19860.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-46
Identity = 153/474 (32.28%), Postives = 225/474 (47.47%), Query Frame = 1 

Query: 8   KSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCPPGFNNTR 67
           K VSW  D  LCQV+LF SED PS+VG  S +HLQAK+   L  H  + N  PPGF    
Sbjct: 6   KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSP--LASHPSDDN-LPPGFGGPF 65

Query: 68  LGNQLA-DVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAIYPRASD 127
             N+    +S IPLIKW C  + ++   W+V AGDES E+E++N RE+R+LEA YP AS 
Sbjct: 66  SANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAFYPGASS 125

Query: 128 IPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQMMASSNV 187
           IP   SV  ++E   ++D  T ++PI+P+E+D+   + +DSA+  +F T S       +V
Sbjct: 126 IPPNPSVPADVEDSHHDDQQTIVIPILPVEDDD---IAMDSAS--DFPTQS-----GVDV 185

Query: 188 QLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGSLIDTNL 247
             EP+I   +  TSS   A            G D++AA SA    +  SKE GS+ID +L
Sbjct: 186 GTEPSITDENTSTSSTLPA------------GPDIMAALSA----ISNSKEQGSMIDQDL 245

Query: 248 LIKIFSDPTMIQNLTNILPLCELISGSPPTAPISVSKPATGSIPLPVQESNMIPKLPNGN 307
           LIKI S+P +++NL         +S +  +   S +  A G +                 
Sbjct: 246 LIKILSNPKLVENLVANRGSAGSVSSNTSSLYSSSTHEANGVVT---------------T 305

Query: 308 LPNVLNRVISSETTLPQVSNIAASDVKPASVPD--RSPAPNLQKVKTTISNGGNCSNKRT 367
            P   N    ++  +  +  +A +   P   P+    PA +    K  I   G    + T
Sbjct: 306 APISSNGQFYAQPPITHIPPMAYTPHAPQDQPNYGAPPARDASYYKNLIQQHGG-DRQET 365

Query: 368 VPSQANVAPVNMVTKGQTLKDANYYKNLVRQHGDQKIGLNGNNHNLRNLNMVHEMEAENL 427
            P Q                   Y  NL    G     +N +N+N R           + 
Sbjct: 366 PPVQ----------------HLGYRYNLQPGGGPNPEMVNSSNNNQR---------PRDS 409

Query: 428 KSKNEKYCIYYNTPKGCRNGVNCQYKHDMS----HNWRTNNI--LETRSTKRLK 473
           K K  K C+Y+N+ +GCR+G NC Y+HD +     N    NI   + ++ KR++
Sbjct: 426 KPKIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNINTSDMQNAKRMR 409

[Close]
BLAST of Lsi01G006230 vs. TAIR10
Match: AT3G51180.1 (AT3G51180.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-35
Identity = 104/264 (39.39%), Postives = 140/264 (53.03%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRS+K + VSW     LCQVK+F +ED P+ V      H         P       D P
Sbjct: 4   MKRSKKPR-VSWPPGPKLCQVKVFRTEDSPANVASQPQRH-------SYPSRKPRGPDLP 63

Query: 61  PGFNNTRLGNQLA---DVSGIPLIKWNCPP-KFVMSCHWRVAAGDESTEIESENFREMRL 120
           PGF     GN  A   +VS IP IKW  PP KF ++  W V  G  S+E ++EN R  ++
Sbjct: 64  PGFE----GNHYAVKPNVSNIPRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKV 123

Query: 121 LEAIYPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTS 180
           LEAIYP  S IP   SVS  +E+E ++DS TP + + PIE++         ++ E  S S
Sbjct: 124 LEAIYPHRSAIPSRPSVSPAVEAECFDDSKTPAIRLTPIEDE-------SESSSEESSNS 183

Query: 181 SVQMMASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSK 240
            V+   ++N Q         +ET    + S ++    L  +  D+  AASAA   LMK+K
Sbjct: 184 KVESGVTANKQ-------GQLETK--PLCSTQEQVSGLTGLAPDLSLAASAALTALMKTK 239

Query: 241 EHGSLIDTNLLIKIFSDPTMIQNL 261
           E GSL+DT LLIK  SDP +I+NL
Sbjct: 244 EQGSLVDTELLIKFLSDPKLIKNL 239

[Close]
BLAST of Lsi01G006230 vs. TAIR10
Match: AT5G66270.1 (AT5G66270.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-32
Identity = 146/503 (29.03%), Postives = 214/503 (42.54%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MK+++K + VSWA D  LCQVKLF S+DCP KV                      +++ P
Sbjct: 2   MKKTKKGR-VSWASDSMLCQVKLFLSDDCPVKV----------------------ASNLP 61

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGF  T    +   +S IP IKW  PP FV+     V +G +S E  SEN R  ++LEA 
Sbjct: 62  PGFEATDYATKRI-ISHIPRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLEAF 121

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YP  S IP                SLT     + +EE+       D     N   + V+ 
Sbjct: 122 YPHRSVIPS-------------RPSLT-----LAVEEEH-----YDDGKTPNIPLTHVE- 181

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
                     A  +SS    + A  SG  P   L+         ASAA + L  +KE GS
Sbjct: 182 ------DERDAAAESSHSFEAPAAVSGLGPELSLL---------ASAALSAL--TKEQGS 241

Query: 241 LIDTNLLIKIFSDPTMIQNLTNIL---PL----------------------CELISGSPP 300
            +D +LL+K+ SDP +++NL N +   PL                         +  +PP
Sbjct: 242 QVDPDLLVKLLSDPKIVENLINGMKGKPLETANNSLNTDITEPRLAPQHVTSTTMDRNPP 301

Query: 301 TAPISVSKPATGSIPLPVQESNMIPKLPNGNLP--NVLNRVISSETTLPQVSNI------ 360
             P +V   A  ++P+ VQ S   P LP  N P  + L+  ++ +   P V N       
Sbjct: 302 PMPGNV---APHNVPVSVQSSATDPPLPKPNQPMSSALSMNLTLQKPTPVVHNYPLSSGI 361

Query: 361 ------AASDVKPASVPDRSPAPNLQKVKTTISNGGNCSNKRTVPSQANVAPVNMVTKGQ 420
                  A+ +KP++  D      + + KT +    +  N   VP  A       +  G 
Sbjct: 362 KVEDSYTAAPLKPSTGDDVV----VSEQKTQLLFPCSSWNMNKVPESARTETDPQIRNGN 421

Query: 421 T----------LKDANYYKNLVRQHGDQKIGLNGNNHNLRNLNMVHEMEAENLKSKNEKY 455
           T          +KD +Y+KNL+R+HG  K      N+    ++       + +K + +K 
Sbjct: 422 TNRDDQVSAKPVKDLDYFKNLIREHGAVKPATTETNNYKGRVD-----HKKIVKVRIQKP 427

[Close]
BLAST of Lsi01G006230 vs. NCBI nr
Match: gi|659080434|ref|XP_008440789.1| (PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis melo])

HSP 1 Score: 724.5 bits (1869), Expect = 1.2e-205
Identity = 382/482 (79.25%), Postives = 413/482 (85.68%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSRKSKSVSW HD+NLCQVKLFSSEDCPS+VGL SCE LQAKTSWMLPPH+ E N CP
Sbjct: 1   MKRSRKSKSVSWPHDLNLCQVKLFSSEDCPSQVGLKSCEPLQAKTSWMLPPHTKEPN-CP 60

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGFN T LGNQL D+SGIPLIKWNCPPKFVMSCHWRV AGDESTEI+++NFREMRLLEAI
Sbjct: 61  PGFNITDLGNQLVDISGIPLIKWNCPPKFVMSCHWRVTAGDESTEIKTQNFREMRLLEAI 120

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YPRASDIP GASVS EIESETYNDSLTPLVPIIPIEEDECG M+LDS  V N ST+S QM
Sbjct: 121 YPRASDIPTGASVSTEIESETYNDSLTPLVPIIPIEEDECGDMKLDSGPVGNLSTNSEQM 180

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
           MASS+VQL+PAI KSS+ETSS  VA+GEKPSEKLVDVGVDVVAAASAAFAVLMKSKE GS
Sbjct: 181 MASSHVQLDPAIPKSSIETSS--VAAGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEQGS 240

Query: 241 LIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPTAPISVSKPATGSIPLPVQESNMIP 300
           LIDTNLLIKIFSDPTMIQNLTN LPL EL+S SPP APISVSKP T SI L + ESN IP
Sbjct: 241 LIDTNLLIKIFSDPTMIQNLTNTLPLFELVSDSPPAAPISVSKPGTRSISLCIPESNTIP 300

Query: 301 KLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNGGNCS 360
           KLPN N  +VLN+  SSETT+PQV NIAAS+VKPASVP  SPAPN QKVKTTISN GN S
Sbjct: 301 KLPNANSLHVLNKDPSSETTVPQVINIAASNVKPASVPGHSPAPNPQKVKTTISNVGNYS 360

Query: 361 NKRTVPSQANVAPVNMVTKGQTLKDANYYKNLVRQHG-------DQKIGLNGNNHNLRNL 420
               V SQ ++A VNMV KGQ +KDANYYKNLVRQHG       + KIGLNGNN N  NL
Sbjct: 361 RTGAVSSQVDIAQVNMVKKGQIVKDANYYKNLVRQHGGDQKDGKELKIGLNGNNQNEYNL 420

Query: 421 NMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMSHNWRTNNILETRSTKRLKL 476
           NMVHEM+AE+LK+KN+KYCIY+N+ KGCRNGVNCQYKHDMS N R N+ILETR  KR+KL
Sbjct: 421 NMVHEMKAEHLKAKNQKYCIYFNSSKGCRNGVNCQYKHDMSQNMRINHILETRGAKRMKL 479

[Close]
BLAST of Lsi01G006230 vs. NCBI nr
Match: gi|449464556|ref|XP_004149995.1| (PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis sativus])

HSP 1 Score: 721.5 bits (1861), Expect = 9.8e-205
Identity = 381/485 (78.56%), Postives = 412/485 (84.95%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSRKSK VSW HD+NLCQVKLFSSE+CPSKVGL SCEHLQAKTSWMLP H+ E N CP
Sbjct: 1   MKRSRKSKCVSWPHDLNLCQVKLFSSEECPSKVGLKSCEHLQAKTSWMLPAHTKEPN-CP 60

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGFN T L NQL D+SGIPLIKWNCPPKFVMSCHWRV AGDESTEI+++NFREMRLLEAI
Sbjct: 61  PGFNITHLRNQLVDISGIPLIKWNCPPKFVMSCHWRVTAGDESTEIKTQNFREMRLLEAI 120

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YPRASDIP GASVS EIESETYNDSLTPLVPIIPIEEDECG M+LDS  V NFST+S QM
Sbjct: 121 YPRASDIPTGASVSTEIESETYNDSLTPLVPIIPIEEDECGVMKLDSGPVGNFSTNSKQM 180

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
           MASSNVQL+PAI KSS+ETSSVA  +GEKPSEKLVDVGVDVVAAASAAFAVLMKSKE GS
Sbjct: 181 MASSNVQLDPAIPKSSIETSSVA--AGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEQGS 240

Query: 241 LIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPT---APISVSKPATGSIPLPVQESN 300
           LIDTNLLIKIFSDPTMIQNLTN LPL EL+S SPPT   APIS+S PAT SI L + ESN
Sbjct: 241 LIDTNLLIKIFSDPTMIQNLTNTLPLFELVSNSPPTAPAAPISMSNPATSSISLSIPESN 300

Query: 301 MIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNGG 360
            IPKL NGNL  V NR +SSETTLPQV+NIAAS+VK  SVP  S AP  QKVKTT+SN G
Sbjct: 301 TIPKLSNGNLSGVSNRDLSSETTLPQVTNIAASNVKADSVPGHSLAPEPQKVKTTMSNVG 360

Query: 361 NCSNKRTVPSQANVAPVNMVTKGQTLKDANYYKNLVRQHG-------DQKIGLNGNNHNL 420
           N S    V SQ ++A VNMV KGQ +KDANYYKNLVRQHG       +QKIGLNGNN N 
Sbjct: 361 NYSRTGAVSSQVDIAQVNMVKKGQIVKDANYYKNLVRQHGGDQKDGKEQKIGLNGNNQNE 420

Query: 421 RNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMSHNWRTNNILETRSTKR 476
            NLNMVHEM+AE+LK+KN+KYCIY+N+PKGCRNGVNCQYKHDMS N R N+ILETR  KR
Sbjct: 421 YNLNMVHEMKAEHLKAKNQKYCIYFNSPKGCRNGVNCQYKHDMSQNMRINHILETRGAKR 480

[Close]
BLAST of Lsi01G006230 vs. NCBI nr
Match: gi|659080458|ref|XP_008440802.1| (PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis melo])

HSP 1 Score: 487.6 bits (1254), Expect = 2.4e-134
Identity = 280/488 (57.38%), Postives = 337/488 (69.06%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSRKSK VSWA  VNLCQVKLFSSEDCPSKVGL S + LQAKT WML P++ E NDCP
Sbjct: 1   MKRSRKSKGVSWARGVNLCQVKLFSSEDCPSKVGLKSPDQLQAKTPWMLHPYTTEINDCP 60

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGF  T LGNQLAD+S IPL+KW  P KFVM+ +WRV AG+ES E+ES+ FREMRLLEA+
Sbjct: 61  PGFEVTPLGNQLADLSCIPLVKWKRPLKFVMNPNWRVGAGEESEEVESQKFREMRLLEAV 120

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YPRAS IP GA+VS +I+ E Y+DSLTPL+PIIP+EEDEC  +  DSA V NFSTSS+ M
Sbjct: 121 YPRASAIPPGATVSSDIQDELYDDSLTPLIPIIPVEEDECEDLGSDSAIVGNFSTSSLPM 180

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
             +S+  LEP++   +VETS+V     EKP EKL DVGVDV  AAS A+AVL KS E GS
Sbjct: 181 --ASHFHLEPSV--RTVETSAV-----EKPIEKLPDVGVDVAVAASTAYAVLTKSMEQGS 240

Query: 241 LIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPP----TAPISVSKPATGSIPLPVQES 300
           +IDTNLLIKIFSDP MIQNL+NI PL   + G+PP     APIS+SK        PV ES
Sbjct: 241 MIDTNLLIKIFSDPKMIQNLSNIHPLSTAVPGNPPPITTVAPISLSK--------PVSES 300

Query: 301 NMIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNG 360
           N IP++ NG    V          LPQ S+I  SDV    VP   P  +  ++K T+ N 
Sbjct: 301 NRIPRVSNGFSSTV-------TAALPQTSSIPTSDVNLVVVPGNLPVQDPNRIKVTVRNA 360

Query: 361 GNCSNKRTVPSQANVAPVNMVTK--GQTLKDANYYKNLVRQHGD------QKIG-LNGNN 420
            N S   T+P QAN++ ++ V K   Q +KD +YYKNLVR+HGD      QK+G  +GN 
Sbjct: 361 ENYSKLGTIPVQANMSLISSVRKEAAQQVKDVSYYKNLVREHGDQRDFKKQKLGQQDGNI 420

Query: 421 HNLRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMSHNWRTNNILETRS 476
           +N  NLNM HEM+ ENLK K +K CIY+N PKGCRNG+NCQ+KHD         I+    
Sbjct: 421 YNHHNLNMAHEMKEENLKPKIQKQCIYFNGPKGCRNGLNCQFKHD---------IILNNQ 455

[Close]
BLAST of Lsi01G006230 vs. NCBI nr
Match: gi|449434494|ref|XP_004135031.1| (PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 5.0e-132
Identity = 278/489 (56.85%), Postives = 335/489 (68.51%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSRKSK VSWAH VNLCQVKLFSSEDCPS+VGL S + LQAKT WML P++ E NDCP
Sbjct: 1   MKRSRKSKGVSWAHGVNLCQVKLFSSEDCPSRVGLKSPDQLQAKTPWMLHPYTAEINDCP 60

Query: 61  PGFNNTRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLEAI 120
           PGF  T LGNQLAD+S IPL+KW  P KF M+ +WRV AG+ES E+ES+ FREMR LEA+
Sbjct: 61  PGFEVTPLGNQLADLSRIPLVKWKRPLKFGMNPNWRVGAGEESEEVESQKFREMRFLEAV 120

Query: 121 YPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSVQM 180
           YPRAS IP GA+VS +I+ E Y+DSLTPLVPIIP+EEDEC  +  DSA V NFSTSS+ M
Sbjct: 121 YPRASAIPPGATVSSDIQDEFYDDSLTPLVPIIPVEEDECEDLGSDSAIVGNFSTSSLPM 180

Query: 181 MASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLVDVGVDVVAAASAAFAVLMKSKEHGS 240
             +S+  LEP++   ++ETS+V     EKP EKL DVGVDV  AAS A+AVL KS E GS
Sbjct: 181 --ASHFHLEPSV--RTIETSAV-----EKPIEKLPDVGVDVAVAASTAYAVLTKSMEQGS 240

Query: 241 LIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPPT----APISVSKPATGSIPLPVQES 300
           +IDTNLLIKIFSDP MIQNL+NI PL   + G+PP     APIS+SK        PV ES
Sbjct: 241 MIDTNLLIKIFSDPKMIQNLSNIHPLSTAVPGNPPPTSTGAPISLSK--------PVNES 300

Query: 301 NMIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTTISNG 360
           N IP++PNG    V          LPQ S+I   DV    VP   P  +   VK T+ N 
Sbjct: 301 NRIPRVPNGFSSTV-------TAALPQTSSIPTPDVNLVVVPGNLPVQDPNLVKVTLRNA 360

Query: 361 GNCSNKRTVPSQANVAPVNMVTK--GQTLKDANYYKNLVRQHGD------QKIG-LNGNN 420
           GN     ++P+ AN++ V+ V K   Q +KD +YYKNLVR+HGD      QK+G  +GNN
Sbjct: 361 GNYPKLGSIPAHANMSLVSSVRKEAAQQMKDVSYYKNLVREHGDQRDFKKQKLGQQDGNN 420

Query: 421 -HNLRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMSHNWRTNNILETR 476
            +N  NLNM HEM+ ENLK K +K CIY+N  KGCRNG+NCQ+KHD         I+   
Sbjct: 421 IYNHHNLNMAHEMKEENLKPKIQKQCIYFNGSKGCRNGLNCQFKHD---------IILNN 456

[Close]
BLAST of Lsi01G006230 vs. NCBI nr
Match: gi|1009144260|ref|XP_015889702.1| (PREDICTED: zinc finger CCCH domain-containing protein 30 [Ziziphus jujuba])

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 202/501 (40.32%), Postives = 289/501 (57.68%), Query Frame = 1 

Query: 1   MKRSRKSKSVSWAHDVNLCQVKLFSSEDCPSKVGLTSCEHLQAKTSWMLPPHSIESNDCP 60
           MKRSR SK VSWA  VNLCQVKLFS +DCP KVG+ S +HL+AK+S ML  +++ S+  P
Sbjct: 5   MKRSRISKRVSWAPGVNLCQVKLFSCDDCPLKVGMISKDHLEAKSSKMLHSNTMGSDGLP 64

Query: 61  PGFNN--TRLGNQLADVSGIPLIKWNCPPKFVMSCHWRVAAGDESTEIESENFREMRLLE 120
           PGF N    +     ++  IP I+W CPPK VMS +W+VA+G+ES E++ +  RE+ +LE
Sbjct: 65  PGFENGFVAVSQSRTELPLIPQIQWKCPPKIVMSNNWQVASGEESEEVKHQKSRELGVLE 124

Query: 121 AIYPRASDIPLGASVSIEIESETYNDSLTPLVPIIPIEEDECGAMELDSAAVENFSTSSV 180
           A++PR S IP   +VS+++++E YND+ TPLVPIIPIEE+E        A V   ++S  
Sbjct: 125 AVFPRFSAIPPSPAVSLDVQNENYNDNGTPLVPIIPIEEEESIYTPYIPAPVNTTTSSQP 184

Query: 181 QMMASSNVQLEPAIVKSSVETSSVAVASGEKPSEKLV-DVGVDVVAAASAAFAVLMKSKE 240
             ++ S ++ E     +   ++   ++S +    KL+  +G D VA+ASAA AV+    +
Sbjct: 185 LDLSGSRLRSEMLNTANCNSSAPEPLSSAQPALGKLLPGLGADAVASASAALAVVNTVGQ 244

Query: 241 HGSLIDTNLLIKIFSDPTMIQNLTNILPLCELISGSPP----TAPISVSKP-ATGSIPLP 300
           +GS+IDT+LLIKI +DP MIQ         +LIS  PP    +AP ++  P  TG+  + 
Sbjct: 245 NGSMIDTDLLIKILADPKMIQ---------KLISEGPPAGTGSAPKNMVSPHLTGTNTVT 304

Query: 301 VQESNMIPKLPNGNLPNVLNRVISSETTLPQVSNIAASDVKPASVPDRSPAPNLQKVKTT 360
                  P +P+  +  VLN V     TLP VS    +   P+SV    PAP L+  +  
Sbjct: 305 QSAPMSFPTIPDNRVQTVLNTVPFQPDTLP-VSGF--NRTTPSSV----PAPILESHRQL 364

Query: 361 ISN--GGNC--------SNKRTVPSQANVAPVNMVTKGQTLKDANYYKNLVRQHGDQK-- 420
           +     GN         S+ +TV  + N AP+  +T     KDANYYKNL+R HG +K  
Sbjct: 365 MPGLPNGNLFAIPNRVRSSAKTVSVKPNTAPIATLT-----KDANYYKNLIRAHGGEKDK 424

Query: 421 -----IGLNGNNHN-LRNLNMVHEMEAENLKSKNEKYCIYYNTPKGCRNGVNCQYKHDMS 476
                     N+HN  + L +   +    LK KN K CIY+ T KGCRNG+NC ++HDM 
Sbjct: 425 TEESIFSRKRNHHNDFQELKLDQNVRQGELKLKNAKPCIYFKTTKGCRNGINCPFQHDMP 484

The following BLAST results are available for this feature:
BLAST of Lsi01G006230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H30_ORYSJ1.3e-4732.75Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN... [more]
C3H6_ARATH2.1e-4532.28Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana GN=At1g1986... [more]
C3H45_ARATH2.8e-3439.39Zinc finger CCCH domain-containing protein 45 OS=Arabidopsis thaliana GN=At3g511... [more]
C3H68_ARATH2.2e-3129.03Zinc finger CCCH domain-containing protein 68 OS=Arabidopsis thaliana GN=At5g662... [more]
BLAST of Lsi01G006230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMC2_CUCSA6.8e-20578.56Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504710 PE=4 SV=1[more]
A0A0A0KGM6_CUCSA3.5e-13256.85Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505290 PE=4 SV=1[more]
W9SCT2_9ROSA1.3e-7840.40Zinc finger CCCH domain-containing protein 30 OS=Morus notabilis GN=L484_026703 ... [more]
A0A067LEC4_JATCU5.4e-7739.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06505 PE=4 SV=1[more]
A0A0B0NQ04_GOSAR2.4e-7238.10Uncharacterized protein OS=Gossypium arboreum GN=F383_17713 PE=4 SV=1[more]
BLAST of Lsi01G006230 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19860.11.2e-4632.28 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT3G51180.11.6e-3539.39 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G66270.11.3e-3229.03 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Lsi01G006230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659080434|ref|XP_008440789.1|1.2e-20579.25PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis melo][more]
gi|449464556|ref|XP_004149995.1|9.8e-20578.56PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis sativus][more]
gi|659080458|ref|XP_008440802.1|2.4e-13457.38PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis melo][more]
gi|449434494|ref|XP_004135031.1|5.0e-13256.85PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis sativus][more]
gi|1009144260|ref|XP_015889702.1|1.3e-7940.32PREDICTED: zinc finger CCCH domain-containing protein 30 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G006230.1Lsi01G006230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 426..454
score: 12
NoneNo IPR availableunknownCoilCoilcoord: 407..427
scor
NoneNo IPR availablePANTHERPTHR33400FAMILY NOT NAMEDcoord: 1..473
score: 5.7E
NoneNo IPR availablePANTHERPTHR33400:SF2ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATEDcoord: 1..473
score: 5.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G006230Csa6G504710Cucumber (Chinese Long) v2culsiB434
Lsi01G006230CSPI06G31550Wild cucumber (PI 183967)cpilsiB439
Lsi01G006230Cucsa.043370Cucumber (Gy14) v1cgylsiB022
Lsi01G006230CmaCh07G004460Cucurbita maxima (Rimu)cmalsiB786
Lsi01G006230CmoCh07G004430Cucurbita moschata (Rifu)cmolsiB774
Lsi01G006230Cla014264Watermelon (97103) v1lsiwmB144
Lsi01G006230MELO3C007883Melon (DHL92) v3.5.1lsimeB156
Lsi01G006230ClCG01G020100Watermelon (Charleston Gray)lsiwcgB127
Lsi01G006230MELO3C007883.2Melon (DHL92) v3.6.1lsimedB163
Lsi01G006230Cla97C01G019490Watermelon (97103) v2lsiwmbB115
Lsi01G006230Bhi03G000667Wax gourdlsiwgoB168
Lsi01G006230Cp4.1LG07g03670Cucurbita pepo (Zucchini)cpelsiB665
Lsi01G006230Cp4.1LG19g09020Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G006230CsGy6G031090Cucumber (Gy14) v2cgyblsiB398
Lsi01G006230Carg16082Silver-seed gourdcarlsiB693
Lsi01G006230CsaV3_6G046870Cucumber (Chinese Long) v3cuclsiB462
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G006230Cucumber (Chinese Long) v3cuclsiB119
Lsi01G006230Cucumber (Chinese Long) v3cuclsiB187
Lsi01G006230Watermelon (97103) v2lsiwmbB144
Lsi01G006230Watermelon (97103) v2lsiwmbB149
Lsi01G006230Bottle gourd (USVL1VR-Ls)lsilsiB032
Lsi01G006230Bottle gourd (USVL1VR-Ls)lsilsiB078
Lsi01G006230Bottle gourd (USVL1VR-Ls)lsilsiB082
Lsi01G006230Bottle gourd (USVL1VR-Ls)lsilsiB085
Lsi01G006230Cucumber (Gy14) v1cgylsiB547
Lsi01G006230Cucurbita maxima (Rimu)cmalsiB013
Lsi01G006230Cucurbita maxima (Rimu)cmalsiB163
Lsi01G006230Cucurbita maxima (Rimu)cmalsiB305
Lsi01G006230Cucurbita maxima (Rimu)cmalsiB407
Lsi01G006230Cucurbita maxima (Rimu)cmalsiB565
Lsi01G006230Cucurbita maxima (Rimu)cmalsiB597
Lsi01G006230Cucurbita maxima (Rimu)cmalsiB720
Lsi01G006230Cucurbita moschata (Rifu)cmolsiB001
Lsi01G006230Cucurbita moschata (Rifu)cmolsiB152
Lsi01G006230Cucurbita moschata (Rifu)cmolsiB292
Lsi01G006230Cucurbita moschata (Rifu)cmolsiB393
Lsi01G006230Cucurbita moschata (Rifu)cmolsiB582
Lsi01G006230Cucurbita moschata (Rifu)cmolsiB710
Lsi01G006230Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G006230Cucurbita pepo (Zucchini)cpelsiB237
Lsi01G006230Cucurbita pepo (Zucchini)cpelsiB439
Lsi01G006230Wild cucumber (PI 183967)cpilsiB107
Lsi01G006230Wild cucumber (PI 183967)cpilsiB170
Lsi01G006230Wild cucumber (PI 183967)cpilsiB252
Lsi01G006230Cucumber (Chinese Long) v2culsiB109
Lsi01G006230Cucumber (Chinese Long) v2culsiB171
Lsi01G006230Cucumber (Chinese Long) v2culsiB253
Lsi01G006230Melon (DHL92) v3.5.1lsimeB132
Lsi01G006230Melon (DHL92) v3.5.1lsimeB142
Lsi01G006230Melon (DHL92) v3.5.1lsimeB148
Lsi01G006230Watermelon (Charleston Gray)lsiwcgB150
Lsi01G006230Watermelon (Charleston Gray)lsiwcgB151
Lsi01G006230Watermelon (97103) v1lsiwmB132
Lsi01G006230Watermelon (97103) v1lsiwmB139
Lsi01G006230Watermelon (97103) v1lsiwmB140
Lsi01G006230Watermelon (97103) v1lsiwmB168
Lsi01G006230Cucumber (Gy14) v2cgyblsiB098
Lsi01G006230Melon (DHL92) v3.6.1lsimedB140
Lsi01G006230Melon (DHL92) v3.6.1lsimedB148
Lsi01G006230Melon (DHL92) v3.6.1lsimedB155
Lsi01G006230Silver-seed gourdcarlsiB364
Lsi01G006230Silver-seed gourdcarlsiB892