Lsi01G005070 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G005070
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 4138222 .. 4141253 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCGTAGGCACGTGGGACAGGCTGAACAGCTCGCACCTCTAAGCATGGAGCTGTGTGATTCTTAATAACTTTGTTTAATTTATATGTGAATTTGAATTCCAATTGCTAAAAACAATGTTCAATCTGTAATAAATTTGGCACAGATACGAAGAAAGGAGAAAGCTTTCAATTTGATTGGTTCAAAGCTACTGGGGATTAATATATGTACATTACACAGACACTTCCATTTGGTATTATAAGAATTAAAGATTACCCTTTATTTTTGTTCTAAATCATTTTATTGCTTACCCATCCCACACCAAAGAGAATTAGAATTCTCTTTTAAGAGTTTACTTACTTCTTCTCTTTGAAAGCTATCGAATGAGACTATTTATAATAATTACTTATAATGCTAGTAATTTCATAAGGATTATGGCCCTTGAAGTTGCAGAGTTAGGAGGATTAGTATAATTCCTTCAACTTGAGTGGTCAGCCAAAAATTCGAGGATCTGACATTTTTCTTTTGGGACGCATGTTCTTCAATACCACCTCTAAGTTTCTTTGGACTTGAATCCATCTGTGGACTTTAGAGCTTGTTTAGGATAACCCTTACCCTAATATAAAAGAATAAAAAGAAATGGAAGAAAAAGGAGTAGAAAGAAGTAGTTCCTTAACCAAAGTATGGAAAGGTTTAGTTAAGATGTAGATTAGAAAATGGGGAGGTCAAGTCAAAGGCCACTAATAATTTTTCTTTTTTGTGTCCAATGTTGATTTAGAGTGGGACTGAATTGTGACTTGAATCGGTAACGTTGTCCACGACCAAGAAGAAACAAACGTAAGTGGGTATCAAAAGTTGATTTGTTGTCTTTTTTTAGTTCTGTAGTGAAAAATATATAAACCATTTTAATGCATGCTTTCCCACTTTACATTATTAATAAATATTTCTACCTAAAATTGTAGTGAAAATTAATCAAAACCAATCCAATAATGTTGACAGGGACATGCTTAATTATATTACCTTAAATAAAGATGGAGACATGTTTTTGAAATTAATTAATGGTGTTAGACTAATTATATATATATTTAGTAATTTTCTTTTCTTTTGGTGGTCTTGATTAATTATGATTGTACAATTCCAATTATGCACGTTGCTTCTGTAAGCAGGCACTACTAGGGAAAAAAGTGGCAGGAATTTTGGACTATTGCTCTAATTTTCTGAGTCAAATCAGAGTCTTACAACGCATCCTAGCTTCATTTTGGAGGCAAACAACTATTCTTTGTTGACAAACATGGTGAATATATTCGAAAAAACCAACAAAAAGTAAGTTTGCCAAATCCATATTTTATGGAGATATATACTTTCTCTCCTACCTGAAGTTATTCCTTTTATTTATACCAACTGAAAATTACCCTTTTTTTCAACTATGTTTGTTACAAGAAATCTAAATCAGACGTTAGCTGTTTGTTTGTTTTTTCCTCTTATGATGCAAATTTTCAGTGTTGGAAAAATGATTTCACAAATCAGAAAATCCGTGGGTTTTTATTTTTTTAGTGGATGACTTAAAATTCGGATGGTTAATATTGTTTGTCCCAATTTTTTAAAATAGTGAAGGATGACCCTTTGTCATTATCAAAATGTACTAAGAGCGTGTTAATTGTTTTTACTATCTCTAGTGAATATGAAATTAAGATTACCCGTACAATAATACTCTCACATGCTAGGCCTCTTCTTCTCTCCCTCGTACTCCCTTTCAACTAATCTAGTACAACAGTGCTCTCATATGTTAGGGCTATTCCTTCATCACACTCCTCTTTGCTCTCTCACTCGTATTCCTCTTTCACTCTTTCATGTGCAATTGTGCTCCTCGCTCTTTCAATTGCACTCTTCACTCTCTCGCTCATATTTCTCTAGATCTCTTACTCACACTTGTCAATTTGGACCTTCATTATTTAATGCATAAAGAATAGGATGAATAATTAACACGCTCTTAATACATTTTAATAACGAGAAAGGACCCTTCTTCATTAATAACTAGGGCGTAAGACATTAAACATCAGAAATAGGGTCATCCCTACAAATGAAAATTCCAAATTTGACGTGGGAGTGGGAAAGGAAAGAGAAAATACTCTGGTAATGAACTTGAAAGTGAAGAATTTTTGTGTAAAGGCGTAATAGACAGTGCGGGACCTCAGAAGAAGTGTTTGGTGACTTCAAATTATTTTCGTTATGGTTCAAATAACCAATAAAAATTTAGAGTAGAAAGAGCTTAACTTTATGCCTTTGACCGCTCACCCTCTCTCTACCTCTCCTCCCTCTCTTCTAATCCACCAGAACCAGAGCTAAATCCATTTTTATTATTCTCTTCTCCCTCCCTTTGCTTCTTCTCTCAGGGCTGAGCTAGTCGGAGACATCTTTCTACAGCACTCCTTTTACTCTGCCAAGAAAAGCAAAGCTGCTCAGCTCCAGTTCTTGAAATTTTCTTCTTCTTCTTCTTCTTCTTTTTTGGGTATACTTTTCGGCTTCTCTCGCTTCGCTTTTTAGTTTTCTTGCCTTTGTTCGTCAAGGGTCTGCATCGCCCTATCTTCTGGTTATGTTTCTCGCATCTGGGTCGCGACCTGGCTTTGGATCTGTGATGGGGTTTCACTGGAAACCGTGGTTCAGTGAGAAAGATCTGGGCTTTTTGGCTCTTATAAGTTCTTATTAGTTGTCGATCATGTTTATGGAATTCGTTTAGTAATTTTAATTCAGTTTAGACTAGTTGAAATTGTACCCAGAAACTGCATTTGCAATGGCTATGTTGATCGACTGATACTCCGATTTGATGGTCATTTCATCTGTTAATTTATGCCTCAAAATTTTCGTTGCTTTTGTTTTCACTTTTTCAACATCTTCTTTACGCTCTGCCTGTTTTTTCCCCCTCCGTAACGCATCTGCATCTGTTCCGTTTGTGTGGGAAATTTAATTCATTTTTTCATGTTTTTTCATAGATCATTCGTCGCTTTCGGTGGACACGAAGGAGAACTAGGATGGGCTGCTAATGGGAGATAG

mRNA sequence

ATGAAGCGTAGGCACGTGGGACAGGCTGAACAGCTCGCACCTCTAAGCATGGAGCTTGAAGAATTTTTGTGTAAAGGCGTAATAGACAGTGCGGGACCTCAGAAGAAGTGTTTGTTTTCTTGCCTTTGTTCGTCAAGGGTCTGCATCGCCCTATCTTCTGGTTATGTTTCTCGCATCTGGGTCGCGACCTGGCTTTGGATCTGTGATGGGGTTTCACTGGAAACCGTGGTTCAATCATTCGTCGCTTTCGGTGGACACGAAGGAGAACTAGGATGGGCTGCTAATGGGAGATAG

Coding sequence (CDS)

ATGAAGCGTAGGCACGTGGGACAGGCTGAACAGCTCGCACCTCTAAGCATGGAGCTTGAAGAATTTTTGTGTAAAGGCGTAATAGACAGTGCGGGACCTCAGAAGAAGTGTTTGTTTTCTTGCCTTTGTTCGTCAAGGGTCTGCATCGCCCTATCTTCTGGTTATGTTTCTCGCATCTGGGTCGCGACCTGGCTTTGGATCTGTGATGGGGTTTCACTGGAAACCGTGGTTCAATCATTCGTCGCTTTCGGTGGACACGAAGGAGAACTAGGATGGGCTGCTAATGGGAGATAG

Protein sequence

MKRRHVGQAEQLAPLSMELEEFLCKGVIDSAGPQKKCLFSCLCSSRVCIALSSGYVSRIWVATWLWICDGVSLETVVQSFVAFGGHEGELGWAANGR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G005070.1Lsi01G005070.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G005070Bottle gourd (USVL1VR-Ls)lsilsiB065
Lsi01G005070Cucumber (Gy14) v1cgylsiB022
Lsi01G005070Cucurbita maxima (Rimu)cmalsiB367
Lsi01G005070Cucurbita maxima (Rimu)cmalsiB517
Lsi01G005070Cucurbita maxima (Rimu)cmalsiB597
Lsi01G005070Cucurbita maxima (Rimu)cmalsiB786
Lsi01G005070Cucurbita moschata (Rifu)cmolsiB502
Lsi01G005070Cucurbita moschata (Rifu)cmolsiB582
Lsi01G005070Cucurbita moschata (Rifu)cmolsiB774
Lsi01G005070Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G005070Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G005070Cucurbita pepo (Zucchini)cpelsiB413
Lsi01G005070Wild cucumber (PI 183967)cpilsiB019
Lsi01G005070Wild cucumber (PI 183967)cpilsiB439
Lsi01G005070Cucumber (Chinese Long) v2culsiB020
Lsi01G005070Cucumber (Chinese Long) v2culsiB434
Lsi01G005070Melon (DHL92) v3.5.1lsimeB129
Lsi01G005070Melon (DHL92) v3.5.1lsimeB156
Lsi01G005070Watermelon (Charleston Gray)lsiwcgB125
Lsi01G005070Watermelon (Charleston Gray)lsiwcgB127
Lsi01G005070Watermelon (97103) v1lsiwmB144
Lsi01G005070Cucumber (Gy14) v2cgyblsiB014
Lsi01G005070Cucumber (Gy14) v2cgyblsiB016
Lsi01G005070Cucumber (Gy14) v2cgyblsiB398
Lsi01G005070Melon (DHL92) v3.6.1lsimedB163
Lsi01G005070Silver-seed gourdcarlsiB364
Lsi01G005070Silver-seed gourdcarlsiB585
Lsi01G005070Cucumber (Chinese Long) v3cuclsiB017
Lsi01G005070Cucumber (Chinese Long) v3cuclsiB462
Lsi01G005070Watermelon (97103) v2lsiwmbB113
Lsi01G005070Watermelon (97103) v2lsiwmbB115
Lsi01G005070Wax gourdlsiwgoB168