Lsi01G004770 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G004770
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Sulfate adenylyltransferase subunit 2
Location	chr01 : 3966149 .. 3968437 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTATCAATTTATCTTTTATGTCAATGTACAAAACATAAAAATATTTTATCGATGAAAATATGGACGTAGAAATTTAAGCTCAGTTTGGTTATATTTCATTAGTTTATTGCCATAAAGTTATCCCTTTGAATGCAAAACATAACCAAAACCCTGAGGGCCAAGGCTAGCGCTGGTGTTTCTTCTCAGACTCTGCCTATCGCATTTGAAAGCGCAGAGGCCGTGGTTTATTGGCCGGGAGATGCGAAAACAATGCTTCAGGTTCTCAATCTAAGACCCCTAACTCCGATTCTGGCCTTATCGACCTCGATTTCCGGTGACCCAACTTCCTCCGCTCTCCCATTACTTCGCCCTCGTAATGCAATACACAATTGGGCGCTTTTACAGTCCAACCTCAAGTGCAACGGCAGATTCTCTTGCCTTTTCTCCGACAATCGAAAAGAGGTGCTGCGCTTTTCTTTTCTTTGTTTGTTTCAACCATCAACCGATTAGAATTTGTAGCTTGTTCTTTTTTCTGTTGTGTTCGTTGTCAATAACCTAATTAATTCTCTGAGATTGATATTTTCGGCCGGATTTTCTTTACTTTTTCGAGGAAAGGTAAATGGGTGGTTCGAAACTTTATGCAGTGGATTTGCCTTCTGTGGCTTTCTTTTTGGGGGAAATTCTGAGAAAAATGTTGAAAGAACACTGAGGTTGGGTAATTACTTTAGAGCTAGGATGGGAGATAGGGATAATTCGGAGTTGGAGCTTAATACCCTGGTTACCTTATTCCATAACAAGCATCAAGTGGATGAGAATTGGATAGCTTTGCTAAGTATTGCTAGCTATTTGTACATTTATTAGAAAATTTTAGTGGATACTAATCTTCCTGTACTTGAATTCTTTAACTTAGACGACCATAAATTTGAGCTTTTGTATGAAGAAACCTGGAAGCTTTCTTGTCAGCATTGCATGTAATCTGTTTTTAGTACAATAGGAGTGGAGAATTCAAACCACGGACCTCTTGGTTGCTAGCACATATTATATGTTAGTTGAGCTATGCTCACTTTGGCATTGCATGTATATGCTGGTTTTACAACTGCATCTGTCTTTAAATAAATTTCGTCCTAAGAGAAAGAAAAAGGTCAACCAATTACCAATCTAGTAGAGAACCATCTTGGCCTAGTGGTAGTGGGAACATAAAGAAAAAAAAAGGTCAAATGGCTAAGGGGTCATGGGCTCAATCCATGGTAGTCACCTACTTAGGATTTAATATCCTACAAGTTTTCTCGACACCCAAATGTTTTAGAGTTGAGGTACGCATAAGCTGGCCCGGACACTCACGTATATAAAAAAAATAAAAAAAAAATTTACCAATCTAGTAGAGTGGCTGCTGAAAAATTGAAGTATGAATTGTTCTATTCCTGTTTAAGAGAGGACTTCAACTTGTTTCTATTTATTTCAATTATTTTAAGGAAGCAATCTTCTATCCTGTCTTTTTTCGTCCATGGGAATCAGAGGGGCAGTATCATTAGTGTTAGATATGCACATCCATCCCTTCACTTTCCTCCCAAAAGAAGAAAAAAACAACAACAATGAGAATTGACTTTATGCTGTTTAATTTTGTGTAATCCAATGTGCATCTGATATGTTCCATATACAAACTTGCAGTGCATTCTTCTTCATTATTGGGACCAACAAAGTGTGTTATGGAGTTGGAACAAAATAAAATCTTGCTTAAATTTGCCTTCTCTCTTTGTTGATAGCAGGAACAGGCAAGGAAGGCATTAGAAAGTGCACTAGGGGGAAAGAAAAATGAATTTGAGAAATGGAATAATGAAATAAAGAAAAGAGGGGAGATGGGTGGTGGTGGTGGTGATGGTGGACGAGGAGGTTGGTTCGGATCGGGCGGATGGTTTGGTTGGTCTGATGACCAATTCTGGCCAGAAGCACAACAGACTAGTCTTGCTGTTTTAGGTATAATTGTCATGGTAAGTATTTTCCTTTATCCATCATAGGTTCTGGTTATCATTGTTTGGGAATGCAATCAAACTAACTAATCTCTCATTTCACTGCTGCAAAAGTATCTCTTGGTTGCGAAAGGTGAACTGTTGCTTGCTGTTGTTTTCAACCCACTGCTTTATGCTTTGCGAGGAACAAGAAATGGATTGACTTTTGTTACTTCAAAAATTTTGAGAAAGTCCTCTGCTAGTAATTATGCTGAGTTTGAGGAGATTTCAAACAAAGAAGTCTCTGGCCATGTCTCTGCCAGAGAGAGAGTTGCAAGGAAATGGGGGAGCGATTGA

mRNA sequence

TTTTTTTTTATCAATTTATCTTTTATGTCAATGTACAAAACATAAAAATATTTTATCGATGAAAATATGGACGTAGAAATTTAAGCTCAGTTTGGTTATATTTCATTAGTTTATTGCCATAAAGTTATCCCTTTGAATGCAAAACATAACCAAAACCCTGAGGGCCAAGGCTAGCGCTGGTGTTTCTTCTCAGACTCTGCCTATCGCATTTGAAAGCGCAGAGGCCGTGGTTTATTGGCCGGGAGATGCGAAAACAATGCTTCAGGTTCTCAATCTAAGACCCCTAACTCCGATTCTGGCCTTATCGACCTCGATTTCCGGTGACCCAACTTCCTCCGCTCTCCCATTACTTCGCCCTCGTAATGCAATACACAATTGGGCGCTTTTACAGTCCAACCTCAAGTGCAACGGCAGATTCTCTTGCCTTTTCTCCGACAATCGAAAAGAGGAACAGGCAAGGAAGGCATTAGAAAGTGCACTAGGGGGAAAGAAAAATGAATTTGAGAAATGGAATAATGAAATAAAGAAAAGAGGGGAGATGGGTGGTGGTGGTGGTGATGGTGGACGAGGAGGTTGGTTCGGATCGGGCGGATGGTTTGGTTGGTCTGATGACCAATTCTGGCCAGAAGCACAACAGACTAGTCTTGCTGTTTTAGGTGAACTGTTGCTTGCTGTTGTTTTCAACCCACTGCTTTATGCTTTGCGAGGAACAAGAAATGGATTGACTTTTGTTACTTCAAAAATTTTGAGAAAGTCCTCTGCTAGTAATTATGCTGAGTTTGAGGAGATTTCAAACAAAGAAGTCTCTGGCCATGTCTCTGCCAGAGAGAGAGTTGCAAGGAAATGGGGGAGCGATTGA

Coding sequence (CDS)

ATGCAAAACATAACCAAAACCCTGAGGGCCAAGGCTAGCGCTGGTGTTTCTTCTCAGACTCTGCCTATCGCATTTGAAAGCGCAGAGGCCGTGGTTTATTGGCCGGGAGATGCGAAAACAATGCTTCAGGTTCTCAATCTAAGACCCCTAACTCCGATTCTGGCCTTATCGACCTCGATTTCCGGTGACCCAACTTCCTCCGCTCTCCCATTACTTCGCCCTCGTAATGCAATACACAATTGGGCGCTTTTACAGTCCAACCTCAAGTGCAACGGCAGATTCTCTTGCCTTTTCTCCGACAATCGAAAAGAGGAACAGGCAAGGAAGGCATTAGAAAGTGCACTAGGGGGAAAGAAAAATGAATTTGAGAAATGGAATAATGAAATAAAGAAAAGAGGGGAGATGGGTGGTGGTGGTGGTGATGGTGGACGAGGAGGTTGGTTCGGATCGGGCGGATGGTTTGGTTGGTCTGATGACCAATTCTGGCCAGAAGCACAACAGACTAGTCTTGCTGTTTTAGGTGAACTGTTGCTTGCTGTTGTTTTCAACCCACTGCTTTATGCTTTGCGAGGAACAAGAAATGGATTGACTTTTGTTACTTCAAAAATTTTGAGAAAGTCCTCTGCTAGTAATTATGCTGAGTTTGAGGAGATTTCAAACAAAGAAGTCTCTGGCCATGTCTCTGCCAGAGAGAGAGTTGCAAGGAAATGGGGGAGCGATTGA

Protein sequence

MQNITKTLRAKASAGVSSQTLPIAFESAEAVVYWPGDAKTMLQVLNLRPLTPILALSTSISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSDNRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWSDDQFWPEAQQTSLAVLGELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSSASNYAEFEEISNKEVSGHVSARERVARKWGSD

Homology

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BLAST of Lsi01G004770 vs. TrEMBL
Match: A0A061GG86_THECC (Sulfate adenylyltransferase subunit 2 OS=Theobroma cacao GN=TCM_030362 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.0e-56
Identity = 134/215 (62.33%), Postives = 152/215 (70.70%), Query Frame = 1


Query: 41  MLQVLNLRPLTPILALSTSISGDPTSS---ALPLLRPRNAIHNWALLQSNLKCNGRFSCL 100
           M QVLNL PL       +S S  P S    +L   R +N   NW+ L  NLKCNGRFSCL
Sbjct: 1   MAQVLNLNPL------GSSYSTRPESPGFRSLNAARSQNVARNWSSLLQNLKCNGRFSCL 60

Query: 101 FSDNRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWS 160
           FSDNR+EEQARKALESALGGKK+EFEKWN EIK+R E  GGG D G GGWFG GG FGWS
Sbjct: 61  FSDNRREEQARKALESALGGKKSEFEKWNKEIKRR-EEAGGGDDAGGGGWFGWGGRFGWS 120

Query: 161 -DDQFWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKILR 220
            DD FW EAQQTSLAVL           GEL+LAVVFNPLLYALRGTR+GLT+VTS+IL 
Sbjct: 121 NDDHFWQEAQQTSLAVLGIIVMYLIIAKGELMLAVVFNPLLYALRGTRSGLTYVTSRILG 180

Query: 221 KSSASNYAEFEEISNKEVSGHVSARERVARKWGSD 241
           K +A    +   +SNKE  G+VSA+E V +KWGS+
Sbjct: 181 KRNADGPPDSCNMSNKETHGYVSAKENVLKKWGSN 208

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BLAST of Lsi01G004770 vs. TrEMBL
Match: F6HRM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00200 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-51
Identity = 125/212 (58.96%), Postives = 148/212 (69.81%), Query Frame = 1


Query: 41  MLQVLNLRPLTPILALSTSISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSD 100
           M Q+L LRP  PI A  ++ S   T SA+    P+     WA LQ  LKCNGRFSCLFS+
Sbjct: 1   MAQLLTLRP--PITAFRSAPS-TRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFSCLFSN 60

Query: 101 NRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWS-DD 160
           NRK+E+ARKALESALGGKK+EFEKWN EIKKR E+GGGG  GG GGWFG GG FGWS DD
Sbjct: 61  NRKQEEARKALESALGGKKDEFEKWNKEIKKREEVGGGGEAGG-GGWFGWGGRFGWSNDD 120

Query: 161 QFWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSS 220
            FW EAQQ SLA+L           GE+LLAV+FNPLL+ALRGTRNG  F+ S+IL+K S
Sbjct: 121 HFWQEAQQASLAILGIIIMYLIIAKGEVLLAVIFNPLLFALRGTRNGFNFIISRILQKVS 180

Query: 221 ASNYAEFEEISNKEVSGHVSARERVARKWGSD 241
            + +   + +  KEV   VSA+E V RKWG +
Sbjct: 181 PATHTGLDNMPKKEVYTPVSAKESVVRKWGGE 208

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BLAST of Lsi01G004770 vs. TrEMBL
Match: I1KNI8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G265300 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 113/194 (58.25%), Postives = 136/194 (70.10%), Query Frame = 1


Query: 59  SISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSDNRKEEQARKALESALGGK 118
           ++ G P+ S   L   R+   NW  LQ  LKCNGRF CLFSDNRKEEQARKALE AL GK
Sbjct: 8   NLGGPPSLSGRKLPPCRSNSQNWTCLQHKLKCNGRFLCLFSDNRKEEQARKALEGALSGK 67

Query: 119 KNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWS-DDQFWPEAQQTSLAVL---- 178
           KNEF+KW+ EIK+R E+GGGG  GG GGWFG G WFGWS DD FW EA+Q  L +L    
Sbjct: 68  KNEFDKWDKEIKRREELGGGGDTGG-GGWFGWGRWFGWSNDDNFWQEAKQAILTILGLVV 127

Query: 179 -------GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSSASNYAEFEEISNKEVSGH 238
                  G++LLAV+FNPLLYALRG RNG  F++SK+L+ +S SN  +F+ +S K+   H
Sbjct: 128 VYLLIAKGDMLLAVIFNPLLYALRGVRNGFGFISSKVLKNTSTSNQPDFDGLSKKKAYQH 187

Query: 239 VSARERVARKWGSD 241
            SA+E V RKWGSD
Sbjct: 188 TSAKENVVRKWGSD 200

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BLAST of Lsi01G004770 vs. TrEMBL
Match: A0A0B2R3Q2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_045818 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 113/194 (58.25%), Postives = 136/194 (70.10%), Query Frame = 1


Query: 59  SISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSDNRKEEQARKALESALGGK 118
           ++ G P+ S   L   R+   NW  LQ  LKCNGRF CLFSDNRKEEQARKALE AL GK
Sbjct: 8   NLGGPPSLSGRKLPPCRSNSQNWTCLQHKLKCNGRFLCLFSDNRKEEQARKALEGALSGK 67

Query: 119 KNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWS-DDQFWPEAQQTSLAVL---- 178
           KNEF+KW+ EIK+R E+GGGG  GG GGWFG G WFGWS DD FW EA+Q  L +L    
Sbjct: 68  KNEFDKWDKEIKRREELGGGGDTGG-GGWFGWGRWFGWSNDDNFWQEAKQAILTILGLVV 127

Query: 179 -------GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSSASNYAEFEEISNKEVSGH 238
                  G++LLAV+FNPLLYALRG RNG  F++SK+L+ +S SN  +F+ +S K+   H
Sbjct: 128 VYLLIAKGDMLLAVIFNPLLYALRGVRNGFGFISSKVLKNTSTSNQPDFDGLSKKKAYQH 187

Query: 239 VSARERVARKWGSD 241
            SA+E V RKWGSD
Sbjct: 188 TSAKENVVRKWGSD 200

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BLAST of Lsi01G004770 vs. TrEMBL
Match: M5WV92_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011534mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-51
Identity = 125/211 (59.24%), Postives = 141/211 (66.82%), Query Frame = 1


Query: 41  MLQVLNLRPLTPILALSTSISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSD 100
           M  VLNL P + IL  S+S    PT+S+    R      +W  L   LKC GRFSCLFSD
Sbjct: 1   MTLVLNLIPPSQILLHSSSSHPLPTTSS----RQNETTQDWTALLFKLKCRGRFSCLFSD 60

Query: 101 NRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWSD-D 160
           NRKEEQARKALE ALGGKK+EFEKW+ EIK+R E+GGGG  GG GGWFG  GWFGWS+ D
Sbjct: 61  NRKEEQARKALEGALGGKKSEFEKWDKEIKRREEVGGGGSAGG-GGWFGWRGWFGWSNGD 120

Query: 161 QFWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSS 220
            FW EAQQ SLAVL           GEL+LAV+FNPLLYALRGTRN   F+TSKILRK  
Sbjct: 121 HFWREAQQASLAVLGIILMYLIIAKGELMLAVIFNPLLYALRGTRNVFAFITSKILRKRG 180

Query: 221 ASNYAEFEEISNKEVSGHVSARERVARKWGS 240
                 F+ IS  E    VSA++ V RKWGS
Sbjct: 181 PDGQVVFDNISKNEAYSSVSAKDSVLRKWGS 206

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BLAST of Lsi01G004770 vs. TAIR10
Match: AT5G20130.1 (AT5G20130.1 unknown protein)

HSP 1 Score: 156.0 bits (393), Expect = 2.9e-38
Identity = 108/198 (54.55%), Postives = 131/198 (66.16%), Query Frame = 1


Query: 66  SSALPLLRPR--------NAIHNWALLQSNLKCNGRFSCLFSD-NRKEEQARKALESALG 125
           SS+ PLL  R        N++  ++L  S  K  GRFSCLFS  N++EEQARK+LESALG
Sbjct: 12  SSSSPLLHLRCCHRTLDPNSV--FSLRTSITKSKGRFSCLFSGGNQREEQARKSLESALG 71

Query: 126 GKKNEFEKWNNEIKKRGEMGGGGG--DGGRGGWFGSGGWFGWSDDQFWPEAQQ---TSLA 185
           GKKNEFEKW+ EIKKR E GGG G   GG GGWFG GGWF  S D FW EAQQ   T LA
Sbjct: 72  GKKNEFEKWDKEIKKREESGGGNGGKGGGGGGWFGGGGWF--SGDHFWKEAQQIAFTLLA 131

Query: 186 VL--------GELLLAVVFNPLLYALRGTRNGLTFVTSKIL-RKSSASNYAEFEEISNKE 241
           +L        GE++ A V NPLLYALRGTR GL+ ++SK++ R++S  +    EE+  KE
Sbjct: 132 ILAVYMVVAKGEVMAAFVLNPLLYALRGTREGLSSLSSKLMGREASKVSGDNSEEMWKKE 191

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BLAST of Lsi01G004770 vs. NCBI nr
Match: gi|449434028|ref|XP_004134798.1| (PREDICTED: uncharacterized protein LOC101207146 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 8.8e-85
Identity = 175/212 (82.55%), Postives = 181/212 (85.38%), Query Frame = 1


Query: 41  MLQVLNLRPLTPILALSTSISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSD 100
           MLQ LNLRP  PILALS S+S DPT S LPL RPRN +HNWALLQS LKCNGRFSCLFSD
Sbjct: 1   MLQALNLRPPPPILALSFSVSDDPTCSPLPLRRPRNPMHNWALLQSKLKCNGRFSCLFSD 60

Query: 101 NRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGD-GGRGGWFGSGGWFGWSDD 160
           NRKEEQARKALESALGGKKNEFEKWNNEIKKR E+GGG G  GGRGGWFGSGGWFGWSDD
Sbjct: 61  NRKEEQARKALESALGGKKNEFEKWNNEIKKREEVGGGSGSGGGRGGWFGSGGWFGWSDD 120

Query: 161 QFWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSS 220
           QFWPEAQQTSLAVL           GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSS
Sbjct: 121 QFWPEAQQTSLAVLGIIVMYLLVAKGELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSS 180

Query: 221 ASNYAEFEEISNKEVSGHVSARERVARKWGSD 241
           ASNYAE E ISNK+    VSA++RVARKWGSD
Sbjct: 181 ASNYAEVEMISNKD----VSAKDRVARKWGSD 208

[Close]

BLAST of Lsi01G004770 vs. NCBI nr
Match: gi|659079091|ref|XP_008440069.1| (PREDICTED: uncharacterized protein LOC103484656 isoform X2 [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 2.2e-83
Identity = 171/211 (81.04%), Postives = 180/211 (85.31%), Query Frame = 1


Query: 41  MLQVLNLRPLTPILALSTSISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSD 100
           MLQ LNLR   PILALS S+S DPT SALPLLRPRN  HNWALL SNLKCNGRFSCLFS+
Sbjct: 1   MLQALNLRTSPPILALSFSVSDDPTCSALPLLRPRNPTHNWALLLSNLKCNGRFSCLFSN 60

Query: 101 NRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWSDDQ 160
           NR+EEQARKALESALGGKKNEFEKWNNEIKKR E+GGG G GGRGGWFGSGGWFGWSDDQ
Sbjct: 61  NRREEQARKALESALGGKKNEFEKWNNEIKKREEVGGGSG-GGRGGWFGSGGWFGWSDDQ 120

Query: 161 FWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSSA 220
           FWPEAQQTSLAV            GELLLAV+FNPLLYALRGTRNGLTFVTSK LRKSSA
Sbjct: 121 FWPEAQQTSLAVFGIIVMYLIVAKGELLLAVIFNPLLYALRGTRNGLTFVTSKFLRKSSA 180

Query: 221 SNYAEFEEISNKEVSGHVSARERVARKWGSD 241
           SNYAE EEISNK+    V+A++RVARKWGSD
Sbjct: 181 SNYAEVEEISNKD----VTAKDRVARKWGSD 206

[Close]

BLAST of Lsi01G004770 vs. NCBI nr
Match: gi|659079089|ref|XP_008440068.1| (PREDICTED: uncharacterized protein LOC103484656 isoform X1 [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 5.3e-82
Identity = 171/212 (80.66%), Postives = 180/212 (84.91%), Query Frame = 1


Query: 41  MLQVLNLRPLTPILALSTSISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFSCLFSD 100
           MLQ LNLR   PILALS S+S DPT SALPLLRPRN  HNWALL SNLKCNGRFSCLFS+
Sbjct: 1   MLQALNLRTSPPILALSFSVSDDPTCSALPLLRPRNPTHNWALLLSNLKCNGRFSCLFSN 60

Query: 101 NRKE-EQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWSDD 160
           NR+E EQARKALESALGGKKNEFEKWNNEIKKR E+GGG G GGRGGWFGSGGWFGWSDD
Sbjct: 61  NRREQEQARKALESALGGKKNEFEKWNNEIKKREEVGGGSG-GGRGGWFGSGGWFGWSDD 120

Query: 161 QFWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSS 220
           QFWPEAQQTSLAV            GELLLAV+FNPLLYALRGTRNGLTFVTSK LRKSS
Sbjct: 121 QFWPEAQQTSLAVFGIIVMYLIVAKGELLLAVIFNPLLYALRGTRNGLTFVTSKFLRKSS 180

Query: 221 ASNYAEFEEISNKEVSGHVSARERVARKWGSD 241
           ASNYAE EEISNK+    V+A++RVARKWGSD
Sbjct: 181 ASNYAEVEEISNKD----VTAKDRVARKWGSD 207

[Close]

BLAST of Lsi01G004770 vs. NCBI nr
Match: gi|590626775|ref|XP_007026263.1| (Sulfate adenylyltransferase subunit 2 [Theobroma cacao])

HSP 1 Score: 225.7 bits (574), Expect = 8.6e-56
Identity = 134/215 (62.33%), Postives = 152/215 (70.70%), Query Frame = 1


Query: 41  MLQVLNLRPLTPILALSTSISGDPTSS---ALPLLRPRNAIHNWALLQSNLKCNGRFSCL 100
           M QVLNL PL       +S S  P S    +L   R +N   NW+ L  NLKCNGRFSCL
Sbjct: 1   MAQVLNLNPL------GSSYSTRPESPGFRSLNAARSQNVARNWSSLLQNLKCNGRFSCL 60

Query: 101 FSDNRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFGWS 160
           FSDNR+EEQARKALESALGGKK+EFEKWN EIK+R E  GGG D G GGWFG GG FGWS
Sbjct: 61  FSDNRREEQARKALESALGGKKSEFEKWNKEIKRR-EEAGGGDDAGGGGWFGWGGRFGWS 120

Query: 161 -DDQFWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKILR 220
            DD FW EAQQTSLAVL           GEL+LAVVFNPLLYALRGTR+GLT+VTS+IL 
Sbjct: 121 NDDHFWQEAQQTSLAVLGIIVMYLIIAKGELMLAVVFNPLLYALRGTRSGLTYVTSRILG 180

Query: 221 KSSASNYAEFEEISNKEVSGHVSARERVARKWGSD 241
           K +A    +   +SNKE  G+VSA+E V +KWGS+
Sbjct: 181 KRNADGPPDSCNMSNKETHGYVSAKENVLKKWGSN 208

[Close]

BLAST of Lsi01G004770 vs. NCBI nr
Match: gi|297741804|emb|CBI33109.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 214.2 bits (544), Expect = 2.6e-52
Identity = 128/217 (58.99%), Postives = 152/217 (70.05%), Query Frame = 1


Query: 36  GDAKTMLQVLNLRPLTPILALSTSISGDPTSSALPLLRPRNAIHNWALLQSNLKCNGRFS 95
           G+AK M Q+L LRP  PI A  ++ S   T SA+    P+     WA LQ  LKCNGRFS
Sbjct: 14  GEAK-MAQLLTLRP--PITAFRSAPS-TRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFS 73

Query: 96  CLFSDNRKEEQARKALESALGGKKNEFEKWNNEIKKRGEMGGGGGDGGRGGWFGSGGWFG 155
           CLFS+NRK+E+ARKALESALGGKK+EFEKWN EIKKR E+GGGG  GG GGWFG GG FG
Sbjct: 74  CLFSNNRKQEEARKALESALGGKKDEFEKWNKEIKKREEVGGGGEAGG-GGWFGWGGRFG 133

Query: 156 WS-DDQFWPEAQQTSLAVL-----------GELLLAVVFNPLLYALRGTRNGLTFVTSKI 215
           WS DD FW EAQQ SLA+L           GE+LLAV+FNPLL+ALRGTRNG  F+ S+I
Sbjct: 134 WSNDDHFWQEAQQASLAILGIIIMYLIIAKGEVLLAVIFNPLLFALRGTRNGFNFIISRI 193

Query: 216 LRKSSASNYAEFEEISNKEVSGHVSARERVARKWGSD 241
           L+K S + +   + +  KEV   VSA+E V RKWG +
Sbjct: 194 LQKVSPATHTGLDNMPKKEVYTPVSAKESVVRKWGGE 225

The following BLAST results are available for this feature:

BLAST of Lsi01G004770 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G004770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GG86_THECC	6.0e-56	62.33	Sulfate adenylyltransferase subunit 2 OS=Theobroma cacao GN=TCM_030362 PE=4 SV=1	[more]
F6HRM1_VITVI	1.2e-51	58.96	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00200 PE=4 SV=...	[more]
I1KNI8_SOYBN	1.5e-51	58.25	Uncharacterized protein OS=Glycine max GN=GLYMA_07G265300 PE=4 SV=1	[more]
A0A0B2R3Q2_GLYSO	1.5e-51	58.25	Uncharacterized protein OS=Glycine soja GN=glysoja_045818 PE=4 SV=1	[more]
M5WV92_PRUPE	2.6e-51	59.24	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011534mg PE=4 SV=1	[more]

BLAST of Lsi01G004770 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20130.1	2.9e-38	54.55	unknown protein	[more]

BLAST of Lsi01G004770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434028\|ref\|XP_004134798.1\|	8.8e-85	82.55	PREDICTED: uncharacterized protein LOC101207146 [Cucumis sativus]	[more]
gi\|659079091\|ref\|XP_008440069.1\|	2.2e-83	81.04	PREDICTED: uncharacterized protein LOC103484656 isoform X2 [Cucumis melo]	[more]
gi\|659079089\|ref\|XP_008440068.1\|	5.3e-82	80.66	PREDICTED: uncharacterized protein LOC103484656 isoform X1 [Cucumis melo]	[more]
gi\|590626775\|ref\|XP_007026263.1\|	8.6e-56	62.33	Sulfate adenylyltransferase subunit 2 [Theobroma cacao]	[more]
gi\|297741804\|emb\|CBI33109.3\|	2.6e-52	58.99	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016779	nucleotidyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G004770.1	Lsi01G004770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 108..128 scor
None	No IPR available	PANTHER	PTHR36393	FAMILY NOT NAMED	coord: 40..240 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G004770	CSPI06G33040	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G004770	CmaCh03G005710	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G004770	CmoCh03G006000	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G004770	Cla014405	Watermelon (97103) v1	lsiwmB144
Lsi01G004770	MELO3C007436	Melon (DHL92) v3.5.1	lsimeB149
Lsi01G004770	ClCG01G021480	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G004770	MELO3C007436.2	Melon (DHL92) v3.6.1	lsimedB156
Lsi01G004770	Cla97C01G021040	Watermelon (97103) v2	lsiwmbB115
Lsi01G004770	Bhi03G000493	Wax gourd	lsiwgoB168
Lsi01G004770	CsGy6G032630	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G004770	Carg00495	Silver-seed gourd	carlsiB364
Lsi01G004770	CsaV3_6G048500	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G004770	Bottle gourd (USVL1VR-Ls)	lsilsiB064
Lsi01G004770	Cucumber (Gy14) v1	cgylsiB022
Lsi01G004770	Cucurbita maxima (Rimu)	cmalsiB367
Lsi01G004770	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G004770	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G004770	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G004770	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G004770	Cucurbita pepo (Zucchini)	cpelsiB413
Lsi01G004770	Wild cucumber (PI 183967)	cpilsiB019
Lsi01G004770	Cucumber (Chinese Long) v2	culsiB020
Lsi01G004770	Cucumber (Chinese Long) v2	culsiB434
Lsi01G004770	Melon (DHL92) v3.5.1	lsimeB129
Lsi01G004770	Cucumber (Gy14) v2	cgyblsiB014
Lsi01G004770	Cucumber (Gy14) v2	cgyblsiB016
Lsi01G004770	Silver-seed gourd	carlsiB585
Lsi01G004770	Cucumber (Chinese Long) v3	cuclsiB017
Lsi01G004770	Watermelon (97103) v2	lsiwmbB112