Lsi01G004740 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCGAATTCCAACCGTCTTTATACAAGAAATCGATTTGCGTTGCTTTCTCATCCTCAAATTATTCGTATACAGTTCCTCTTTTCTTCAGCCTCTCCATAGTTTTCCCTTCCATCGTTTTCATATTAAGCAAAAACCACACCAGGTTTCTCTCTCAACTCATTCCCTCTATTCGATTTTCTTTACTAGTTTCTGCTGGGGTTCGGAATTTTATGTGGAGAGTTCTTCTTCAAATTTACAGGTACTGTCGACTTGTTTTTTGAAATTTTCTTTGGTTCGGAACTGTCTGATACTAAACTCAATCGTCTTGGATTTATCTCCAGTAGTTACAACTGAACTGATAGCAAGCTTTGAAGTATTCGTAACCTTTAGAGTTTAACTACATGTTTTCAGGACTGTTCGGTAGTTTCTGTTTATCTTTTTTTGGAAATGTTATATGGAGTATTCGGTTTTCGGTTTATCCTTTTTTGAATTCGAGCTTTTTGTATCTCTAACTTTCGAGCTGAGAATTGCATAAGTCTGATTTTCCGGAACTTATTTTTGTTAATGTTAGGTGTTTGTATCCATCGACTTGCTATATACATTATGTGTGTTATACGCATTTATGGACGTTGAAATCAATACTTTGAGTTTTGAACTTATGGTCTTGTTTTGAATTGATATTTCAGGGAATAGTTCTTGTGCAGCTAATGATTTTTAGGATCCGGTGAATTGCATTTCTGAATTCTGACCATGTTAAACGACAATAGTACCAATAGTCCGTCGACTCCAGGTGGTCGGACTCGGCATCGCAGGCGCCAAAGTGATGTGTGTTCTCCCTGTTTGATGCGTACCTATTACGTTTTATTCACTATTACCTCTTTTCCACATGAAAATATCCCTTGGAAATAGTCAATTTAAAATGAATTTCGGCTCTTAAATTTTTAGCAGAAGTAATAACAGGAATGCTTAATTGTGTAAAGAGCCCCATGCCTATTTCTGTCGACGAAAATACCGTTCTTGTACTTCATTCATACGCAGCAGGATATTGGCTGGTTAACATTATATAATTAACTTTAGTAATTTATTTTTCAATTGTTTCTTAGGGAACTTCGGAGGATAGCAAGCCAAATGAAAGAAATTTACTAGTTAATGACCGGAGTAAATACAAATCAATGTTGATCCGTGCATACTCAACAATTTGGATGATTGGGGGTTTTGCATTAATTATATACTTTGGGCATCTCTATATTACTGCCATGGTTGTGGTTATTCAAGTTTTCATGGCAAAGGAACTGTTCAACCTACTCAGGAGAGCTCGTGAGGATACTCGTTTACCAGGGTTTCGACTATTAAATTGGTAAAGTCAAGGCTTTTTGTATTTTCTTTGGTCTATCCTCTAGTCTCTATATACAATATCTGTTGCATCCTGATTCAGAGCAGCATCCTTTGGAGATTTGCTTTTTTTTTTTTTTAGGAGCTTGCATTTTTTATTTACTAATTGGTTCGAACTCAAGTGCAGGCACTTCTTCTTCACAGCAATGCTATTTGTGTATGGTCGCATTTTAAGTCAGCGGCTTGTTAATACTGTCACTTCAGATAAATTTTTATATCAGCTAGTGAGCAGTCTCATCAAGTATCATATGGTTATATGTTATTCCTTGTACATTGCAGGTTAGTGATCCTTTTTTTAGCATTCCTGTTAAAAATTTTACCTTCTTGAAACTTTAACCTGTGCCATTAACATCATTTCCTGGTGTGCGGTTGACTACTGCAATTTGATGAGTGAAAATTTCTTGGATTTTTTGTTTAATTTCCATTTATTCATTCACTTTCAAATTTTTCTGTTTCGTGATTATATTAGTTTTTTCAATTGTCTGTAAATCTTAAATTAAATTTCATGGCAGTGTTGTAACATGTTTCCCTCATTATTTCTCCGCTTCTGGTTGGACTCAGGTTTTATGTGGTTCATTCTTACTTTAAAGAAGAAGATGTACAAATATCAATTTGGCCAGTATGCATGGACGCATATGATTCTAATTGTTGTTTTTACACAGTCCTCTTTCACGGTAGCCAATATTTTTGAAGGAATCATCTGGTAATTCAACCTTCTTAAAAGGGAGAAAATGTTATGTTATAGAAAATCTTATGTTCTGTTGCTTGCTGTTTAACTTGGAATTTCATTTTTTTCCTTATGAATGAGTAATATTTCTGCAGGTTTCTCCTACCAGCATCACTTATTGTTATCAACGACATTGCTGCCTATATATTTGGTTTCTTCTTTGGAAGAACACCATTGATCAAGTTGTCTCCAAAGAAAACTTGGGAGGGATTTATAGGAGCCTCTATTATGACTATCATATCTGCTTTTTTTGTGAGCAAATTTTTCCTTACTTTATATTTTCATCACTGGATTTAATGAGTTTCTTATGTCAACTTGTTATTGATGTTGCTCTACTGGTCATGATAGAGCTCTGTAGCTTTTGTTTTCAGAATTAGTTATCAAGCACTAGTAACACCTTTGGATTGCTTGATATTTCCTAAAATAGTGCTTAATTTAATTGTATTAGCAAAGGTGGACACTGATTCAATCATTGATGAATTAGTATTTCCATGTAAATTTGCTACATTAGTAATAACTAGGCTATGTATCTCTCTGTCATAGACGGTTTCTTTTAGTAATGATTACTTGTTAACATTTTATCTGCAGTTTGACAATTGTAGTTAATGAACATGGCATATTCGTCTGTTTTGCAGCTTGCTAATGTCATGGGTCGTTATCAGTGGCTTACTTGTCCAAGAACGGTACTTGTTTTGCAAATCCAACTTTCTTGCTTTTGAAGAGGCTTGTTCTTATTTTGAAGATTTTACTGTCATATGGTTCAATAATCTCAGGATTTATCAACTGGTTGGCTTCACTGTGATCCCGGTCCTGTGTTTAAGCCCGAATATTTCACTTTACCAGAATGGACTCCTAATTGGGTCAGTAATGACTATAAATTGAATCTTATTTAATATGAATAGTGTAACTCTTCTATCGCTTTTTATTCTGGCATTCTTCTAACCTTATAGTAAAATTGTCTCCAATATGCGCATCTATATTCTATGTATGTCCCTACCTGACTTTGGGTGAGTTATATTGCTGATCTCAGATCTTCTTGTATTTATTTTTGGTTGGAGTTCATTTTAGGTTTGTTAGAACTTAGAATTATTGGGAAAGTCACCAAGTCGATTATTAGACCATATACTAAGCCACTTATAAAGGAGAAAGGTAACCCTGTGAACCATTTGGAGTTTTATTTGAGGAGTGAGCCATTTGAGCTACATAATGAAGAAAAGAGAGACATCTTGAAGCCATTTGCGCTT TTCGAATTCCAACCGTCTTTATACAAGAAATCGATTTGCGTTGCTTTCTCATCCTCAAATTATTCGTATACAGTTCCTCTTTTCTTCAGCCTCTCCATAGTTTTCCCTTCCATCGTTTTCATATTAAGCAAAAACCACACCAGGTTTCTCTCTCAACTCATTCCCTCTATTCGATTTTCTTTACTAGTTTCTGCTGGGGTTCGGAATTTTATGTGGAGAGTTCTTCTTCAAATTTACAGGGAATAGTTCTTGTGCAGCTAATGATTTTTAGGATCCGGTGAATTGCATTTCTGAATTCTGACCATGTTAAACGACAATAGTACCAATAGTCCGTCGACTCCAGGTGGTCGGACTCGGCATCGCAGGCGCCAAAGTGATGGAACTTCGGAGGATAGCAAGCCAAATGAAAGAAATTTACTAGTTAATGACCGGAGTAAATACAAATCAATGTTGATCCGTGCATACTCAACAATTTGGATGATTGGGGGTTTTGCATTAATTATATACTTTGGGCATCTCTATATTACTGCCATGGTTGTGGTTATTCAAGTTTTCATGGCAAAGGAACTGTTCAACCTACTCAGGAGAGCTCGTGAGGATACTCGTTTACCAGGGAGCTTGCATTTTTTATTTACTAATTGGTTCGAACTCAAGTGCAGGCACTTCTTCTTCACAGCAATGCTATTTGTGTATGGTCGCATTTTAAGTCAGCGGCTTGTTAATACTGTCACTTCAGATAAATTTTTATATCAGCTAGTGAGCAGTCTCATCAAGTATCATATGTGTTGTAACATGTTTCCCTCATTATTTCTCCGCTTCTGGTTGGACTCAGGTTTTATGTGGTTCATTCTTACTTTAAAGAAGAAGATGTACAAATATCAATTTGGCCAGTATGCATGGACGCATATGATTCTAATTGTTGTTTTTACACAGTCCTCTTTCACGTTAATGAACATGGCATATTCGTCTGTTTTGCAGCTTGCTAATGTCATGGGTCGTTATCAGTGGCTTACTTGTCCAAGAACGGATTTATCAACTGGTTGGCTTCACTGTGATCCCGGTCCTGTGTTTAAGCCCGAATATTTCACTTTACCAGAATGGACTCCTAATTGGGTCAGTTTGTTAGAACTTAGAATTATTGGGAAAGTCACCAAGTCGATTATTAGACCATATACTAAGCCACTTATAAAGGAGAAAGGTAACCCTGTGAACCATTTGGAGTTTTATTTGAGGAGTGAGCCATTTGAGCTACATAATGAAGAAAAGAGAGACATCTTGAAGCCATTTGCGCTT ATGTTAAACGACAATAGTACCAATAGTCCGTCGACTCCAGGTGGTCGGACTCGGCATCGCAGGCGCCAAAGTGATGGAACTTCGGAGGATAGCAAGCCAAATGAAAGAAATTTACTAGTTAATGACCGGAGTAAATACAAATCAATGTTGATCCGTGCATACTCAACAATTTGGATGATTGGGGGTTTTGCATTAATTATATACTTTGGGCATCTCTATATTACTGCCATGGTTGTGGTTATTCAAGTTTTCATGGCAAAGGAACTGTTCAACCTACTCAGGAGAGCTCGTGAGGATACTCGTTTACCAGGGAGCTTGCATTTTTTATTTACTAATTGGTTCGAACTCAAGTGCAGGCACTTCTTCTTCACAGCAATGCTATTTGTGTATGGTCGCATTTTAAGTCAGCGGCTTGTTAATACTGTCACTTCAGATAAATTTTTATATCAGCTAGTGAGCAGTCTCATCAAGTATCATATGTGTTGTAACATGTTTCCCTCATTATTTCTCCGCTTCTGGTTGGACTCAGGTTTTATGTGGTTCATTCTTACTTTAAAGAAGAAGATGTACAAATATCAATTTGGCCAGTATGCATGGACGCATATGATTCTAATTGTTGTTTTTACACAGTCCTCTTTCACGTTAATGAACATGGCATATTCGTCTGTTTTGCAGCTTGCTAATGTCATGGGTCGTTATCAGTGGCTTACTTGTCCAAGAACGGATTTATCAACTGGTTGGCTTCACTGTGATCCCGGTCCTGTGTTTAAGCCCGAATATTTCACTTTACCAGAATGGACTCCTAATTGGGTCAGTTTGTTAGAACTTAGAATTATTGGGAAAGTCACCAAGTCGATTATTAGACCATATACTAAGCCACTTATAAAGGAGAAAGGTAACCCTGTGAACCATTTGGAGTTTTATTTGAGGAGTGAGCCATTTGAGCTACATAATGAAGAAAAGAGAGACATCTTGAAGCCATTTGCGCTT MLNDNSTNSPSTPGGRTRHRRRQSDGTSEDSKPNERNLLVNDRSKYKSMLIRAYSTIWMIGGFALIIYFGHLYITAMVVVIQVFMAKELFNLLRRAREDTRLPGSLHFLFTNWFELKCRHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQLVSSLIKYHMCCNMFPSLFLRFWLDSGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFTQSSFTLMNMAYSSVLQLANVMGRYQWLTCPRTDLSTGWLHCDPGPVFKPEYFTLPEWTPNWVSLLELRIIGKVTKSIIRPYTKPLIKEKGNPVNHLEFYLRSEPFELHNEEKRDILKPFAL
BLAST of Lsi01G004740 vs. Swiss-Prot
Match: CDS1_SOLTU (Phosphatidate cytidylyltransferase 1 OS=Solanum tuberosum GN=CDS1 PE=1 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 5.4e-69 Identity = 147/218 (67.43%), Postives = 166/218 (76.15%), Query Frame = 1
BLAST of Lsi01G004740 vs. Swiss-Prot
Match: CDS2_ARATH (Phosphatidate cytidylyltransferase 2 OS=Arabidopsis thaliana GN=CDS2 PE=1 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.6e-68 Identity = 148/218 (67.89%), Postives = 168/218 (77.06%), Query Frame = 1
BLAST of Lsi01G004740 vs. Swiss-Prot
Match: CDS1_ARATH (Phosphatidate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CDS1 PE=1 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 8.7e-67 Identity = 143/218 (65.60%), Postives = 167/218 (76.61%), Query Frame = 1
BLAST of Lsi01G004740 vs. Swiss-Prot
Match: CDS3_ARATH (Phosphatidate cytidylyltransferase 3 OS=Arabidopsis thaliana GN=CDS3 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.1e-58 Identity = 130/213 (61.03%), Postives = 156/213 (73.24%), Query Frame = 1
BLAST of Lsi01G004740 vs. Swiss-Prot
Match: CDSA_DICDI (Probable phosphatidate cytidylyltransferase OS=Dictyostelium discoideum GN=cdsA PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.9e-13 Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 1
BLAST of Lsi01G004740 vs. TrEMBL
Match: A0A0A0KH79_CUCSA (Phosphatidate cytidylyltransferase OS=Cucumis sativus GN=Csa_6G511760 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 2.6e-86 Identity = 182/218 (83.49%), Postives = 190/218 (87.16%), Query Frame = 1
BLAST of Lsi01G004740 vs. TrEMBL
Match: A0A067JMG2_JATCU (Phosphatidate cytidylyltransferase OS=Jatropha curcas GN=JCGZ_21145 PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71 Identity = 159/218 (72.94%), Postives = 175/218 (80.28%), Query Frame = 1
BLAST of Lsi01G004740 vs. TrEMBL
Match: W9S610_9ROSA (Phosphatidate cytidylyltransferase OS=Morus notabilis GN=L484_016277 PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 5.8e-70 Identity = 152/218 (69.72%), Postives = 169/218 (77.52%), Query Frame = 1
BLAST of Lsi01G004740 vs. TrEMBL
Match: M5WMJ7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa007152m2g PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.9e-69 Identity = 156/221 (70.59%), Postives = 171/221 (77.38%), Query Frame = 1
BLAST of Lsi01G004740 vs. TrEMBL
Match: I1NI71_SOYBN (Phosphatidate cytidylyltransferase OS=Glycine max GN=GLYMA_20G207000 PE=3 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.8e-69 Identity = 153/218 (70.18%), Postives = 172/218 (78.90%), Query Frame = 1
BLAST of Lsi01G004740 vs. TAIR10
Match: AT4G22340.3 (AT4G22340.3 cytidinediphosphate diacylglycerol synthase 2) HSP 1 Score: 261.2 bits (666), Expect = 8.9e-70 Identity = 148/218 (67.89%), Postives = 168/218 (77.06%), Query Frame = 1
BLAST of Lsi01G004740 vs. TAIR10
Match: AT1G62430.1 (AT1G62430.1 CDP-diacylglycerol synthase 1) HSP 1 Score: 255.4 bits (651), Expect = 4.9e-68 Identity = 143/218 (65.60%), Postives = 167/218 (76.61%), Query Frame = 1
BLAST of Lsi01G004740 vs. TAIR10
Match: AT4G26770.1 (AT4G26770.1 Phosphatidate cytidylyltransferase family protein) HSP 1 Score: 228.4 bits (581), Expect = 6.4e-60 Identity = 130/213 (61.03%), Postives = 156/213 (73.24%), Query Frame = 1
BLAST of Lsi01G004740 vs. NCBI nr
Match: gi|449434016|ref|XP_004134792.1| (PREDICTED: phosphatidate cytidylyltransferase 1 [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 3.7e-86 Identity = 182/218 (83.49%), Postives = 190/218 (87.16%), Query Frame = 1
BLAST of Lsi01G004740 vs. NCBI nr
Match: gi|700193856|gb|KGN49060.1| (hypothetical protein Csa_6G511760 [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 3.7e-86 Identity = 182/218 (83.49%), Postives = 190/218 (87.16%), Query Frame = 1
BLAST of Lsi01G004740 vs. NCBI nr
Match: gi|659079079|ref|XP_008440063.1| (PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis melo]) HSP 1 Score: 320.1 bits (819), Expect = 4.6e-84 Identity = 179/218 (82.11%), Postives = 189/218 (86.70%), Query Frame = 1
BLAST of Lsi01G004740 vs. NCBI nr
Match: gi|297736733|emb|CBI25879.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 309.3 bits (791), Expect = 8.1e-81 Identity = 177/301 (58.80%), Postives = 208/301 (69.10%), Query Frame = 1
BLAST of Lsi01G004740 vs. NCBI nr
Match: gi|802778808|ref|XP_012091244.1| (PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]) HSP 1 Score: 278.5 bits (711), Expect = 1.5e-71 Identity = 159/218 (72.94%), Postives = 175/218 (80.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |