Lsi01G004500 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAGAGAGAATGGGTTCCCGTTTCCACTTCTTCCTAATTCTTAGCCTACTACTTTTGGCTATCTCTTCCCTGGGTTACTCAACTCCGACGGAAGCCACCGCGGCCCAACAGGCAAATTCCACCTCCGGCCTCCACAACCCAGATGCCAAAGTAACATCGGCTTCAAAAATATGGAAGAGCCCTGGTTTGGGATACACTACACTTTTAAGACATGTAAGAATGGAGGATATTATAAACCATCACACTATTTGATAGAAAAATACTTAGTTGCATCCTAGGTTGCACTTATCTTTATGCACCTTACTATATTAATACTCAATTATAATTTGTCATGTGATAAATTCTTCTTATTTCTTATTACTTTTTTTTTTTTTTTTTCGTGTTAAAAGTGGGATGCCATAAAAATGAGTGCATCTACTTAGATGCACTCAAGTAATGCACTCAAGTATTGCTTGATCATATTAGATTACTTGTTGTGTTCTCATAAATAAGTAATATTTAGCTATTAGTTGAACTCCATTTATTTTTTATTGTCCAATTGCATGTGACAAATTTTTTTTTTCTTTCAACCTTTTTACCTTTTTAAGTTGTTTTTATTATTATTATTATTAACATTGCATATTATGATATTAGTTAGCAGTTAAGTATGATTCAAATTATATAAGTGCATATGCATGAAATGCTCGTACGTGGTAATTACTAATTAAAAGAAGAGTAATACACACAAAAACAAATACGTATATTATTCTTAAATAGAAAATAGGAATAAATACTGATTATGAGAGAAGGTATTGAGTTAGACAGGTTCATGGGGTTCTGAATATGATAGGATGGGGAACTTTGATGCCCATTGGGATTATGATTGCTAGATACTTCAAAGAATTCCCAATGAGCTGCGACCAATGGTATTCTGCTCATGCTGTGTGCCAAACTTGTGGTTATATTATGGGCATTGTGGGATGGGGTTTTGGAGTCTCAGTCCTCAAATCTTCAAAACGCTCTCACTTACCATTCTTACTTCTCGGCATTTTCGTCATCCTCCTCACAACCATTCAAGTAACTAATTTATTTCCCTATAAACTATCAATCAACTTTTATTTAGTCGTTTTAGTGATTACAAAATTGATGAATGTTTGTTTTGCAGATGTTTGCTATATGTGTTCAAGCGAAGAAGGAGGGCGGGAGGCGGCGGCGGTGGGAAATATACCATAATGTAATGGGATATGTGATAATGGTACTGATAATAGCAGACATATTTGAAGGAATCAATGCGCAGCGGCACCCAAAGAATTGGCGATGGGGTTACGTGGGAATACTTTCAGGTCTTGCAATTGTGGCTGCGGCTTTGGAGCTCCACAGATGCATCAAGCTTAAACTCTTCAAACAGGCTATGAAATTAAATGCCAATATGTATTCTCCCACTACTTGATTCTCATTTCATACTCCCCCTCATCTCTCCACCAATATACAATCTGATCCTCATTTATTTTTTCTCTAAAATTAATAATCTTTTTTAATCTCCACATGGCTTC AAGAAGAGAGAATGGGTTCCCGTTTCCACTTCTTCCTAATTCTTAGCCTACTACTTTTGGCTATCTCTTCCCTGGGTTACTCAACTCCGACGGAAGCCACCGCGGCCCAACAGGCAAATTCCACCTCCGGCCTCCACAACCCAGATGCCAAAGTAACATCGGCTTCAAAAATATGGAAGAGCCCTGGTTTGGGATACACTACACTTTTAAGACATGTTCATGGGGTTCTGAATATGATAGGATGGGGAACTTTGATGCCCATTGGGATTATGATTGCTAGATACTTCAAAGAATTCCCAATGAGCTGCGACCAATGGTATTCTGCTCATGCTGTGTGCCAAACTTGTGGTTATATTATGGGCATTGTGGGATGGGGTTTTGGAGTCTCAGTCCTCAAATCTTCAAAACGCTCTCACTTACCATTCTTACTTCTCGGCATTTTCGTCATCCTCCTCACAACCATTCAAATGTTTGCTATATGTGTTCAAGCGAAGAAGGAGGGCGGGAGGCGGCGGCGGTGGGAAATATACCATAATGTAATGGGATATGTGATAATGGTACTGATAATAGCAGACATATTTGAAGGAATCAATGCGCAGCGGCACCCAAAGAATTGGCGATGGGGTTACGTGGGAATACTTTCAGGTCTTGCAATTGTGGCTGCGGCTTTGGAGCTCCACAGATGCATCAAGCTTAAACTCTTCAAACAGGCTATGAAATTAAATGCCAATATGTATTCTCCCACTACTTGATTCTCATTTCATACTCCCCCTCATCTCTCCACCAATATACAATCTGATCCTCATTTATTTTTTCTCTAAAATTAATAATCTTTTTTAATCTCCACATGGCTTC ATGGGTTCCCGTTTCCACTTCTTCCTAATTCTTAGCCTACTACTTTTGGCTATCTCTTCCCTGGGTTACTCAACTCCGACGGAAGCCACCGCGGCCCAACAGGCAAATTCCACCTCCGGCCTCCACAACCCAGATGCCAAAGTAACATCGGCTTCAAAAATATGGAAGAGCCCTGGTTTGGGATACACTACACTTTTAAGACATGTTCATGGGGTTCTGAATATGATAGGATGGGGAACTTTGATGCCCATTGGGATTATGATTGCTAGATACTTCAAAGAATTCCCAATGAGCTGCGACCAATGGTATTCTGCTCATGCTGTGTGCCAAACTTGTGGTTATATTATGGGCATTGTGGGATGGGGTTTTGGAGTCTCAGTCCTCAAATCTTCAAAACGCTCTCACTTACCATTCTTACTTCTCGGCATTTTCGTCATCCTCCTCACAACCATTCAAATGTTTGCTATATGTGTTCAAGCGAAGAAGGAGGGCGGGAGGCGGCGGCGGTGGGAAATATACCATAATGTAATGGGATATGTGATAATGGTACTGATAATAGCAGACATATTTGAAGGAATCAATGCGCAGCGGCACCCAAAGAATTGGCGATGGGGTTACGTGGGAATACTTTCAGGTCTTGCAATTGTGGCTGCGGCTTTGGAGCTCCACAGATGCATCAAGCTTAAACTCTTCAAACAGGCTATGAAATTAAATGCCAATATGTATTCTCCCACTACTTGA MGSRFHFFLILSLLLLAISSLGYSTPTEATAAQQANSTSGLHNPDAKVTSASKIWKSPGLGYTTLLRHVHGVLNMIGWGTLMPIGIMIARYFKEFPMSCDQWYSAHAVCQTCGYIMGIVGWGFGVSVLKSSKRSHLPFLLLGIFVILLTTIQMFAICVQAKKEGGRRRRWEIYHNVMGYVIMVLIIADIFEGINAQRHPKNWRWGYVGILSGLAIVAAALELHRCIKLKLFKQAMKLNANMYSPTT
BLAST of Lsi01G004500 vs. Swiss-Prot
Match: B561J_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g47530 OS=Arabidopsis thaliana GN=At5g47530 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.0e-29 Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 1
BLAST of Lsi01G004500 vs. Swiss-Prot
Match: B651B_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g17280 OS=Arabidopsis thaliana GN=At4g17280 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.0e-28 Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 1
BLAST of Lsi01G004500 vs. Swiss-Prot
Match: B561P_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana GN=At5g35735 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-27 Identity = 61/164 (37.20%), Postives = 88/164 (53.66%), Query Frame = 1
BLAST of Lsi01G004500 vs. Swiss-Prot
Match: B561C_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis thaliana GN=At3g25290 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26 Identity = 55/156 (35.26%), Postives = 90/156 (57.69%), Query Frame = 1
BLAST of Lsi01G004500 vs. Swiss-Prot
Match: B561O_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana GN=At4g12980 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25 Identity = 52/157 (33.12%), Postives = 90/157 (57.32%), Query Frame = 1
BLAST of Lsi01G004500 vs. TrEMBL
Match: A0A0A0KHA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G513490 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 4.9e-106 Identity = 197/250 (78.80%), Postives = 219/250 (87.60%), Query Frame = 1
BLAST of Lsi01G004500 vs. TrEMBL
Match: B9RXG9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0903660 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 5.2e-47 Identity = 87/188 (46.28%), Postives = 127/188 (67.55%), Query Frame = 1
BLAST of Lsi01G004500 vs. TrEMBL
Match: M5X124_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017590mg PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 5.4e-44 Identity = 93/223 (41.70%), Postives = 139/223 (62.33%), Query Frame = 1
BLAST of Lsi01G004500 vs. TrEMBL
Match: W9RJV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014174 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.5e-43 Identity = 88/207 (42.51%), Postives = 134/207 (64.73%), Query Frame = 1
BLAST of Lsi01G004500 vs. TrEMBL
Match: B9N8E1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s00810g PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42 Identity = 87/210 (41.43%), Postives = 134/210 (63.81%), Query Frame = 1
BLAST of Lsi01G004500 vs. TAIR10
Match: AT5G47530.1 (AT5G47530.1 Auxin-responsive family protein) HSP 1 Score: 129.0 bits (323), Expect = 3.9e-30 Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 1
BLAST of Lsi01G004500 vs. TAIR10
Match: AT4G17280.1 (AT4G17280.1 Auxin-responsive family protein) HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29 Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 1
BLAST of Lsi01G004500 vs. TAIR10
Match: AT5G35735.1 (AT5G35735.1 Auxin-responsive family protein) HSP 1 Score: 125.2 bits (313), Expect = 5.7e-29 Identity = 61/164 (37.20%), Postives = 88/164 (53.66%), Query Frame = 1
BLAST of Lsi01G004500 vs. TAIR10
Match: AT3G25290.1 (AT3G25290.1 Auxin-responsive family protein) HSP 1 Score: 121.7 bits (304), Expect = 6.3e-28 Identity = 55/156 (35.26%), Postives = 90/156 (57.69%), Query Frame = 1
BLAST of Lsi01G004500 vs. TAIR10
Match: AT4G12980.1 (AT4G12980.1 Auxin-responsive family protein) HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26 Identity = 52/157 (33.12%), Postives = 90/157 (57.32%), Query Frame = 1
BLAST of Lsi01G004500 vs. NCBI nr
Match: gi|659079018|ref|XP_008440031.1| (PREDICTED: uncharacterized protein LOC103484629 isoform X1 [Cucumis melo]) HSP 1 Score: 421.8 bits (1083), Expect = 8.3e-115 Identity = 208/250 (83.20%), Postives = 225/250 (90.00%), Query Frame = 1
BLAST of Lsi01G004500 vs. NCBI nr
Match: gi|700193881|gb|KGN49085.1| (hypothetical protein Csa_6G513490 [Cucumis sativus]) HSP 1 Score: 392.1 bits (1006), Expect = 7.1e-106 Identity = 197/250 (78.80%), Postives = 219/250 (87.60%), Query Frame = 1
BLAST of Lsi01G004500 vs. NCBI nr
Match: gi|778720287|ref|XP_011658132.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g17280-like [Cucumis sativus]) HSP 1 Score: 379.0 bits (972), Expect = 6.2e-102 Identity = 188/235 (80.00%), Postives = 208/235 (88.51%), Query Frame = 1
BLAST of Lsi01G004500 vs. NCBI nr
Match: gi|659079020|ref|XP_008440032.1| (PREDICTED: uncharacterized protein LOC103484629 isoform X2 [Cucumis melo]) HSP 1 Score: 261.2 bits (666), Expect = 1.9e-66 Identity = 128/154 (83.12%), Postives = 140/154 (90.91%), Query Frame = 1
BLAST of Lsi01G004500 vs. NCBI nr
Match: gi|223542283|gb|EEF43825.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 196.1 bits (497), Expect = 7.4e-47 Identity = 87/188 (46.28%), Postives = 127/188 (67.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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