Lsi01G003940 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G003940
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 3397561 .. 3399617 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCGGTGAGAATGAAGCGTAAAGTGATATTCTTATCTTATATTTTCATGGTAAGCTACTCAATGGACAACATATTGCAATGAAGAGGCTTGCTCTTAACTCACAAGGAGATGTTGAATTCAAAATGAAGTCCTTTTGGTGGTCAAACTTCAACATCGAAACTTGGGATTCTGCTTGCAAGGAAGTGGAAGACTTATCATGTATGAATTTGTACCAAATGGCAGCCTTGACCACTTCATATTTGGTATAACCTTTTTTCTTGCTTTGGTCTGTACAAATTGAAAAAAGGCATCCTTTTAAAATTATTATCATATATGGATCTTGAAAATGTAGATTTTGGAAACCCGACACCCCTAGATTGGGAAAAACGATACAAAATCATAAATGACATTGCATGAGATTTATGCCTTCAAATTATACATTGTAATCTCAAATCTAGCAATATTTTATTGGATGCAGAAATAAATCTAAAGATTACATATTTTTGGTATGGCAAGATTATTTGAAATATATGAGACTCAAAGCAATACAAGTAAGAGTTGTAGAAACATAGTAAGTATACATTTTTTATTTTCCTATGACAACTTCTTAAAGTCTTACATGCACTTCATGTTTGTATAATTTTGTCTTGTATTGGTTTGGAGTAATGCAGGTTATCTAATGTCTTTTGTTTTTAACATTCATAATCTTGTTTCTCTGCGCAACACACAATAAACAAAAATTATGGATTATGGATTCTGGAGCATCCGATCACAATATTGATTACATCAGTATTTCCATCGGTTCAAATCTCACTCGGATCATTCCTTAGTTCGAATAGCAAATGTATCTCTTGCTCTCCAATGTTCTTTATGTTCTTACATTGAGTTGCAAACTTAATGTCAAGCAAACTTAGGTGACTTTAATTGTCTAAATTTTATTCAAATTTGTGTGAATTTCAGGAGTGTGGTTCGGGAAAGGTGAGTCTTCCAAGTTATCTTCCAAGTTCGTCTTTTCAACCCGAGTGTGAGTCTTCTTCCAATTATGTTAGTCTCATCCCAAAGTCATCTTCCAGTTCTAGGTCTTTGTCTAGTGAAAATCAAGTCATGTTATGGCACTTTCGTCTTGGCCATCCAATTTTTTTTTGTATCTTGGGAAGTTGTTTCCTCATCAATAAAAATTCGAGTCGCTTTCAGTGTAAAATTTGCCAACTCTCCAAACATACCAGAAATCCTCATCTAAGTATACCCTATAAATCTCCAAAACCTTTTGCATTGATCCACAGTGATATGAGATTATTTCAATTCAACTCTTGGGTCATTTTTTTTTCATCTCATGGTATTTTGTTCACACTAGTTCATGCGTGGACACTCCTCAACAAAATGAGATTGACAAAAGGAAAAATAGACACCTTCTCAAGGTCGCATGCTCTCTTATGATTGCAATTGCAAATAATGTTCCTAATCTGTTTTGGGGAAAAGCCATTCTTACTGCAACCTTTCTAATAAATTGAACGCCTTCCTCCAAATTCAAATCTTCTCGACATGTCTTCCTCCAAATTCATTCCCAACTACAAAACTTTTCATCAAATGCACATCTTCGAGTTTTTGGACGTTCCACCTTTGTTCACAATCATTCTCCTCATCGATCCAAATTTGATCCAAAATCCACCAAGTGCATTTATCTAGGCTATTCTTCACATCAAAAGGGGTACAAATGTTATTCCCCCAATGACTAGAAAAATGTATACTTCTATGAATGTTACCTTCTTTGAAGGGGATGCAAGAGTGCCATGGGAAGTTTAGTCTACTTTTTCCACACCTCCTCATATCATAACCAAAGTCTTAACTCCTCTTCTAAATGAACTAACTATTTTCGTGTTGAATTCACCAATTGTTTCTAAACCTGAAATCTCACAAGTTTCTGAACCTGTAGTCTCACAAGTTTCTGAACCTGTAGTCTCACAAAGTCGAACTCCTATTGTTTACTCGAGAAGGAAAGGGGTTTACCTTGCAAGACTCTGAATGTCAATCGCTTGAACCAAACACATTTCTATGGTGCCCTTGATTTATGA

mRNA sequence

ATGGGGGCGCTACTCAATGGACAACATATTGCAATGAAGAGGCTTGCTCTTAACTCACAAGGAGATGTTGAATTCAAAATGAAGTCCTTTTGGTGGTCAAACTTCAACATCGAAACTTGGGATTCTGCTTGCAAGGAAGTGGAAGACTTATCATGTATGAATTTGTACCAAATGGCAGCCTTGACCACTTCATATTTGCAATATTTTATTGGATGCAGAAATAAATCTAAAGATTACATATTTTTGGTATGGCAAGATTATTTGAAATATATGAGACTCAAAGCAATACAAGAGTGTGGTTCGGGAAAGGTGAGTCTTCCAAGTTATCTTCCAAGTTCGTCTTTTCAACCCGAGTGTGAGTCTTCTTCCAATTATGTTAGTCTCATCCCAAAGTCATCTTCCAGTTCTAGTCTCACAAAGTCGAACTCCTATTGTTTACTCGAGAAGGAAAGGGGTTTACCTTGCAAGACTCTGAATGTCAATCGCTTGAACCAAACACATTTCTATGGTGCCCTTGATTTATGA

Coding sequence (CDS)

ATGGGGGCGCTACTCAATGGACAACATATTGCAATGAAGAGGCTTGCTCTTAACTCACAAGGAGATGTTGAATTCAAAATGAAGTCCTTTTGGTGGTCAAACTTCAACATCGAAACTTGGGATTCTGCTTGCAAGGAAGTGGAAGACTTATCATGTATGAATTTGTACCAAATGGCAGCCTTGACCACTTCATATTTGCAATATTTTATTGGATGCAGAAATAAATCTAAAGATTACATATTTTTGGTATGGCAAGATTATTTGAAATATATGAGACTCAAAGCAATACAAGAGTGTGGTTCGGGAAAGGTGAGTCTTCCAAGTTATCTTCCAAGTTCGTCTTTTCAACCCGAGTGTGAGTCTTCTTCCAATTATGTTAGTCTCATCCCAAAGTCATCTTCCAGTTCTAGTCTCACAAAGTCGAACTCCTATTGTTTACTCGAGAAGGAAAGGGGTTTACCTTGCAAGACTCTGAATGTCAATCGCTTGAACCAAACACATTTCTATGGTGCCCTTGATTTATGA

Protein sequence

MGALLNGQHIAMKRLALNSQGDVEFKMKSFWWSNFNIETWDSACKEVEDLSCMNLYQMAALTTSYLQYFIGCRNKSKDYIFLVWQDYLKYMRLKAIQECGSGKVSLPSYLPSSSFQPECESSSNYVSLIPKSSSSSSLTKSNSYCLLEKERGLPCKTLNVNRLNQTHFYGALDL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G003940.1Lsi01G003940.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G003940Cucurbita pepo (Zucchini)cpelsiB022
Lsi01G003940Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G003940Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G003940Cucurbita pepo (Zucchini)cpelsiB415
Lsi01G003940Wild cucumber (PI 183967)cpilsiB018
Lsi01G003940Wild cucumber (PI 183967)cpilsiB439
Lsi01G003940Wild cucumber (PI 183967)cpilsiB516
Lsi01G003940Cucumber (Chinese Long) v2culsiB019
Lsi01G003940Cucumber (Chinese Long) v2culsiB434
Lsi01G003940Cucumber (Chinese Long) v2culsiB502
Lsi01G003940Melon (DHL92) v3.5.1lsimeB127
Lsi01G003940Melon (DHL92) v3.5.1lsimeB130
Lsi01G003940Melon (DHL92) v3.5.1lsimeB149
Lsi01G003940Watermelon (Charleston Gray)lsiwcgB127
Lsi01G003940Watermelon (Charleston Gray)lsiwcgB128
Lsi01G003940Watermelon (Charleston Gray)lsiwcgB134
Lsi01G003940Watermelon (97103) v1lsiwmB137
Lsi01G003940Watermelon (97103) v1lsiwmB144
Lsi01G003940Watermelon (97103) v1lsiwmB163
Lsi01G003940Cucumber (Gy14) v2cgyblsiB015
Lsi01G003940Cucumber (Gy14) v2cgyblsiB398
Lsi01G003940Melon (DHL92) v3.6.1lsimedB138
Lsi01G003940Melon (DHL92) v3.6.1lsimedB156
Lsi01G003940Silver-seed gourdcarlsiB585
Lsi01G003940Silver-seed gourdcarlsiB797
Lsi01G003940Silver-seed gourdcarlsiB846
Lsi01G003940Silver-seed gourdcarlsiB917
Lsi01G003940Cucumber (Chinese Long) v3cuclsiB020
Lsi01G003940Cucumber (Chinese Long) v3cuclsiB462
Lsi01G003940Watermelon (97103) v2lsiwmbB115
Lsi01G003940Watermelon (97103) v2lsiwmbB131
Lsi01G003940Wax gourdlsiwgoB168
Lsi01G003940Wax gourdlsiwgoB192
Lsi01G003940Bottle gourd (USVL1VR-Ls)lsilsiB048
Lsi01G003940Bottle gourd (USVL1VR-Ls)lsilsiB066
Lsi01G003940Cucumber (Gy14) v1cgylsiB022
Lsi01G003940Cucumber (Gy14) v1cgylsiB093
Lsi01G003940Cucumber (Gy14) v1cgylsiB238
Lsi01G003940Cucurbita maxima (Rimu)cmalsiB199
Lsi01G003940Cucurbita maxima (Rimu)cmalsiB366
Lsi01G003940Cucurbita maxima (Rimu)cmalsiB477
Lsi01G003940Cucurbita maxima (Rimu)cmalsiB597
Lsi01G003940Cucurbita maxima (Rimu)cmalsiB786
Lsi01G003940Cucurbita moschata (Rifu)cmolsiB189
Lsi01G003940Cucurbita moschata (Rifu)cmolsiB354
Lsi01G003940Cucurbita moschata (Rifu)cmolsiB462
Lsi01G003940Cucurbita moschata (Rifu)cmolsiB582
Lsi01G003940Cucurbita moschata (Rifu)cmolsiB774