Lsi01G002890 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGCCACGTCACTCTCCCTCCCCATCAACCGTCCTAACAAGCGGTTGCACCATCCCATACTCTACTACCCGACGCACCCAATCCAATAGTACAATAATACGACATCACAAGGAATTACCGCCAGAAATTGCTTCGCGATAAGCCTTCCTCAATAAATCCTCGCCCTATCCAACGAAACCACATTTGCCTCTCTCACTCTCTGCTCCTGCTGCTGAAGTTATGGAGTCTCAGTTGCTCTCACGCGCCACTTCCTTCGCCGGTGGCATTCCCACCCTCCGCAAGTTGCACAGAGACACCACTACTAACAACAACCATGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATCTGGGGAAGACAACTCCGCCCGTCTTTACTGCTCGATACGCCGCATCTAGTCTCTGCTAAACGGGAGACGATTCGCCCTACCTTTGCGGCGGCCTCCTCTTCTCCCGCCGGAGGCAGCGATTCCGCCGGGTGAGGTTCGTCTCCTCCGTTATGAACCGAACCGGCTCCGAGATTCACCTTCCAACTGATTCTATTTTTTTTAAACTCTTGCAGGGAGGCGAAGGTTGCTCCGGTGGGTTTCTTAGAGAAGAATCCGGCGTTGGTCACCGGATTCTTTTTCTTTATGTGGTAGGTTTAAGTGTTGGTCACGTGTTTTGCACGGCGGAGGCCGGGTTGTAATTATTACGTTACGGCAGGATTGAGTTGGGTTGTGCGAAATTACTGTGCTGTCCCTTCTGTTTTGTAGGTACTTCTTGAACGTGATTTTCAATATTCTCAACAAGAAGATATATAATTACTTCCCCTACCCTTAGTACGTATGCTATTTTCCCCTTTTTAATGGTTATTTTCATTTTGCATTTTGCATTTTACATTTTCATCCCTGTATTTCTTTTATATTGTTATTAATATATTGAGTGTTTGTGTACGTGGCAGTTTTGTGTCGGTGATCCATTTGTTTGTTGGGGTGGTTTACTGTTTGATAAGCTGGGCCGTGGGTCTTCCTAAGCGAGCAGTAAGTCAACTCTTTCTAGCCCAGTAAAACAATTTTGTCTTCTTTTAAATTTTCTTAACCTTTTCATACCCATTTTAGTCTTTTTAGTTTTTTTTATTAGCCTTGTTTCTTCAAATTAAGTAGTAATAGTTGTCTAATTGGTAGAGTGGAGTTGTTTTGAAACTAATCACCTAATATAAAGAGTATTTTGATTGAGATAGTAAAATAGACATCGATGTCATTGCAATTTTGATTGAAATTTTTTTCTCCTTTATTTAGTTCAAAGATGGCAATGTAACTTTTGTAATCTTTGTACCCATGTTTATTAGAAGTTACATTGTAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAAAAAAAGGAAAGTGTAAAATGGCCAAATAAAATTTTAGAAGTGAATAAATTATATTAGGAGTAAAATAGGCAGTAAAATATATTTAAAAAAAGGCAGTAAAATTTATCCCTCACAAATAAATGCAAGTTAGTAATGGCTGAATTGTCAACTCATGGAACATTTGATAACTAGCATTGTTTTCTACAGTTTTGGGGAGTTCGTATTTCTTTTGAAAATATTGTAAGTATGGTCATGATGTTTTATGACAAGGTATCAGTTACTTAAGTTTACCTTAATTTATCAACTTAAATGTTTATGTTGATTAAAGATTTAACATGATATCAAAGGAGGATGCTCAACCGTTGTAATGTCATTTCATCTCTAATTAATATTAACTTCCAATTATTGACCATTCTACACATTTTTGAGCGCACAAGTGAGAGAGATGGTTAAAAATATTGATATAATTAAATTTATTATAACTCATCAACTTAAGCTTTTAAGTTGATTGGTGCTTTAACAGACTGAAAAGCTAGTTCATTTTCTACTCTCTTCTCTCTATTGAACACAAGGGATTGTTAACATGTGTTTTGGCTTGCAGCCTATTGATTCGACCCTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCATGTCACTAGCAATGTCTCATTCGCAGCTGTTGCTGTCTCATTCACTCACACAATCAAAGGTAAACCACCAAATTTACTAATGAATCAGTTCACAGCAAATTCCTGGATTTTGTCGTTTTGCTGAAAATCTTGTTCAATCATTTTCAGCTCTGGAACCGTTCTTTAACGCTGCCGCTTCTCAATTCATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCCTTGGTAAATCCTTTTCCCTTTACCTGCATTTTGATGTTTAATATGAACCCATAATATTACTTTTAAAGTTTGAGGTCTCTTGTGTTGACATGTAATTTGGTTTCATGTGATGATGCTCTTGTTTGGATTGATCAATGTAGGTGTGTCACTGGCATCCTTGACTGAGCTTTCATTTAACTGGACTGGCTTTATTAGTGCTATGATTTCCAATATCTCCTTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGGTTATCTTCAACTTAAACTTACCTTTGATTCTTTTTTACTCTGGCATTTGTAACTGGAACTGATCTATGCTTTGTTTACAGACTGACATGGACAGCACCAACGTCTATGCCTATATTTCCATTATTGCTCTCATTTTCTGCATTCCACCTGCTGTCATTGTAAGTTTCACTTCGCTATGATACTAAATTATTGATAAAATTAAATTTATCGTAATCCATCAACTTTTGAGCTTTTTTGGTCGATTGGTGATTTTGATTTAACATGGTATTAGAGTAGGAGATCTTGAGTGTGAATCTGTGCAATATCATTTGCTCCTAAATTAATATCGCCCACTTGTTTGACATTCTACCAATTTTTAAGTAAGCGAGGGAGAGTGTTAATATATTGATACAATGATATCGTAACCTATAAGCTTAAGCTTTTAAGCGGTTGATTGGCTATTTACCATTAAGTTTTTTTGTTTTGTTATCCACTTTCTACCATGTTTTTAAAAACCAAGGCAAAATTTGAAAATTAAAAAAAGTAGTCTTCGTTTTTAGAATTTTACTAAGAAATTCTGAAAACCATAGTAAAGAAATGGGGGAAAGAACAAACATAAATTTCAAAAACAGAAAACTAAAAACAAAATGGTTATCCAACAGAGCGAACGAGATTTTAATTTTCACAATCTTGCACTGTGGTTCTTGATAGGTGGAAGGGCCTCAACTGCTGAAGTTTGGTTTCAATGATGCCATAGCCAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTAGGGATGTTTTATCACCTTTACAATCAGGTATGTTGCCTAATTTCATTTTATTTCTAAGAGAGGCTGTAAATTTTCAATGGTTTGAAGAGAACAATCTTGGTTTGGATGACTTGACAGTTAGCAACCAACACCTTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGTAATAATCTTTCACTTTCTTTGTGTCTATATATTGCAGTTTTCTACTTTCAATTGCTGCAATAAAAATTTTCTGCTTGTAGGCAACAAAATCTCTACACAGACTGGTATTGGAACCAGCATTGCAATTGCAGGAGTAGCACTTTACTCTTACATCAAGGCTAAGATGGAAGAAGAGAAACGAGTGAGTTTTATGATAATCAAAGTTTATGACTACTGTCTAAATCAATATTATTTGCTTCTTTCTGCTTTCTAAATGAAGTTTTATTGTTTGGACAGCGAACAAAGGTGGCTTGAAGAAGCATTGGATGGAGGTGATGGGAAGCATGGAATTGAGGGGAGGATTTGGTGTTGTAAATTTTAA CGCCACGTCACTCTCCCTCCCCATCAACCGTCCTAACAAGCGGTTGCACCATCCCATACTCTACTACCCGACGCACCCAATCCAATAGTACAATAATACGACATCACAAGGAATTACCGCCAGAAATTGCTTCGCGATAAGCCTTCCTCAATAAATCCTCGCCCTATCCAACGAAACCACATTTGCCTCTCTCACTCTCTGCTCCTGCTGCTGAAGTTATGGAGTCTCAGTTGCTCTCACGCGCCACTTCCTTCGCCGGTGGCATTCCCACCCTCCGCAAGTTGCACAGAGACACCACTACTAACAACAACCATGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATCTGGGGAAGACAACTCCGCCCGTCTTTACTGCTCGATACGCCGCATCTAGTCTCTGCTAAACGGGAGACGATTCGCCCTACCTTTGCGGCGGCCTCCTCTTCTCCCGCCGGAGGCAGCGATTCCGCCGGGGAGGCGAAGGTTGCTCCGGTGGGTTTCTTAGAGAAGAATCCGGCGTTGGTCACCGGATTCTTTTTCTTTATGTGGTACTTCTTGAACGTGATTTTCAATATTCTCAACAAGAAGATATATAATTACTTCCCCTACCCTTATTTTGTGTCGGTGATCCATTTGTTTGTTGGGGTGGTTTACTGTTTGATAAGCTGGGCCGTGGGTCTTCCTAAGCGAGCACCTATTGATTCGACCCTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCATGTCACTAGCAATGTCTCATTCGCAGCTGTTGCTGTCTCATTCACTCACACAATCAAAGCTCTGGAACCGTTCTTTAACGCTGCCGCTTCTCAATTCATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCCTTGGTGTGTCACTGGCATCCTTGACTGAGCTTTCATTTAACTGGACTGGCTTTATTAGTGCTATGATTTCCAATATCTCCTTTACCTACAGAACCAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTAGGGATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACCTTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGCAACAAAATCTCTACACAGACTGGTATTGGAACCAGCATTGCAATTGCAGGAGTAGCACTTTACTCTTACATCAAGGCTAAGATGGAAGAAGAGAAACGATTTTATTGTTTGGACAGCGAACAAAGGTGGCTTGAAGAAGCATTGGATGGAGGTGATGGGAAGCATGGAATTGAGGGGAGGATTTGGTGTTGTAAATTTTAA ATGGAGTCTCAGTTGCTCTCACGCGCCACTTCCTTCGCCGGTGGCATTCCCACCCTCCGCAAGTTGCACAGAGACACCACTACTAACAACAACCATGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATCTGGGGAAGACAACTCCGCCCGTCTTTACTGCTCGATACGCCGCATCTAGTCTCTGCTAAACGGGAGACGATTCGCCCTACCTTTGCGGCGGCCTCCTCTTCTCCCGCCGGAGGCAGCGATTCCGCCGGGGAGGCGAAGGTTGCTCCGGTGGGTTTCTTAGAGAAGAATCCGGCGTTGGTCACCGGATTCTTTTTCTTTATGTGGTACTTCTTGAACGTGATTTTCAATATTCTCAACAAGAAGATATATAATTACTTCCCCTACCCTTATTTTGTGTCGGTGATCCATTTGTTTGTTGGGGTGGTTTACTGTTTGATAAGCTGGGCCGTGGGTCTTCCTAAGCGAGCACCTATTGATTCGACCCTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCATGTCACTAGCAATGTCTCATTCGCAGCTGTTGCTGTCTCATTCACTCACACAATCAAAGCTCTGGAACCGTTCTTTAACGCTGCCGCTTCTCAATTCATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCCTTGGTGTGTCACTGGCATCCTTGACTGAGCTTTCATTTAACTGGACTGGCTTTATTAGTGCTATGATTTCCAATATCTCCTTTACCTACAGAACCAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTAGGGATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACCTTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGCAACAAAATCTCTACACAGACTGGTATTGGAACCAGCATTGCAATTGCAGGAGTAGCACTTTACTCTTACATCAAGGCTAAGATGGAAGAAGAGAAACGATTTTATTGTTTGGACAGCGAACAAAGGTGGCTTGAAGAAGCATTGGATGGAGGTGATGGGAAGCATGGAATTGAGGGGAGGATTTGGTGTTGTAAATTTTAA MESQLLSRATSFAGGIPTLRKLHRDTTTNNNHVAFVHTRPIAEGANLIWGRQLRPSLLLDTPHLVSAKRETIRPTFAAASSSPAGGSDSAGEAKVAPVGFLEKNPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSLASLTELSFNWTGFISAMISNISFTYRTKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVALYSYIKAKMEEEKRFYCLDSEQRWLEEALDGGDGKHGIEGRIWCCKF
BLAST of Lsi01G002890 vs. Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 3.5e-99 Identity = 195/267 (73.03%), Postives = 216/267 (80.90%), Query Frame = 1
BLAST of Lsi01G002890 vs. Swiss-Prot
Match: TPT_ARATH (Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=1 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 4.6e-99 Identity = 204/273 (74.73%), Postives = 226/273 (82.78%), Query Frame = 1
BLAST of Lsi01G002890 vs. Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 3.6e-96 Identity = 199/273 (72.89%), Postives = 216/273 (79.12%), Query Frame = 1
BLAST of Lsi01G002890 vs. Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 3.1e-95 Identity = 197/273 (72.16%), Postives = 212/273 (77.66%), Query Frame = 1
BLAST of Lsi01G002890 vs. Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 3.1e-95 Identity = 200/279 (71.68%), Postives = 221/279 (79.21%), Query Frame = 1
BLAST of Lsi01G002890 vs. TrEMBL
Match: A0A067GDQ5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013023mg PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 1.6e-146 Identity = 288/387 (74.42%), Postives = 318/387 (82.17%), Query Frame = 1
BLAST of Lsi01G002890 vs. TrEMBL
Match: A0A0A0KLJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518130 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 4.2e-136 Identity = 252/267 (94.38%), Postives = 259/267 (97.00%), Query Frame = 1
BLAST of Lsi01G002890 vs. TrEMBL
Match: F4KG20_ARATH (Triose phosphate/phosphate translocator TPT OS=Arabidopsis thaliana GN=APE2 PE=1 SV=1) HSP 1 Score: 487.6 bits (1254), Expect = 1.4e-134 Identity = 279/401 (69.58%), Postives = 307/401 (76.56%), Query Frame = 1
BLAST of Lsi01G002890 vs. TrEMBL
Match: A0A061GF51_THECC (Glucose-6-phosphate/phosphate translocator-related OS=Theobroma cacao GN=TCM_029804 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 8.9e-118 Identity = 257/413 (62.23%), Postives = 295/413 (71.43%), Query Frame = 1
BLAST of Lsi01G002890 vs. TrEMBL
Match: A0A0D2SU90_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G088300 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 8.3e-108 Identity = 214/271 (78.97%), Postives = 239/271 (88.19%), Query Frame = 1
BLAST of Lsi01G002890 vs. TAIR10
Match: AT5G46110.4 (AT5G46110.4 Glucose-6-phosphate/phosphate translocator-related) HSP 1 Score: 362.8 bits (930), Expect = 2.6e-100 Identity = 204/273 (74.73%), Postives = 226/273 (82.78%), Query Frame = 1
BLAST of Lsi01G002890 vs. TAIR10
Match: AT5G54800.1 (AT5G54800.1 glucose 6-phosphate/phosphate translocator 1) HSP 1 Score: 151.8 bits (382), Expect = 9.0e-37 Identity = 84/184 (45.65%), Postives = 116/184 (63.04%), Query Frame = 1
BLAST of Lsi01G002890 vs. TAIR10
Match: AT1G61800.1 (AT1G61800.1 glucose-6-phosphate/phosphate translocator 2) HSP 1 Score: 145.6 bits (366), Expect = 6.4e-35 Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1
BLAST of Lsi01G002890 vs. TAIR10
Match: AT5G17630.1 (AT5G17630.1 Nucleotide/sugar transporter family protein) HSP 1 Score: 138.7 bits (348), Expect = 7.9e-33 Identity = 96/243 (39.51%), Postives = 131/243 (53.91%), Query Frame = 1
BLAST of Lsi01G002890 vs. TAIR10
Match: AT3G01550.1 (AT3G01550.1 phosphoenolpyruvate (pep)/phosphate translocator 2) HSP 1 Score: 125.9 bits (315), Expect = 5.3e-29 Identity = 86/246 (34.96%), Postives = 125/246 (50.81%), Query Frame = 1
BLAST of Lsi01G002890 vs. NCBI nr
Match: gi|641859004|gb|KDO77694.1| (hypothetical protein CISIN_1g013023mg [Citrus sinensis]) HSP 1 Score: 527.3 bits (1357), Expect = 2.2e-146 Identity = 288/387 (74.42%), Postives = 318/387 (82.17%), Query Frame = 1
BLAST of Lsi01G002890 vs. NCBI nr
Match: gi|659078598|ref|XP_008439808.1| (PREDICTED: triose phosphate/phosphate translocator, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 500.4 bits (1287), Expect = 2.9e-138 Identity = 257/267 (96.25%), Postives = 263/267 (98.50%), Query Frame = 1
BLAST of Lsi01G002890 vs. NCBI nr
Match: gi|659078600|ref|XP_008439809.1| (PREDICTED: triose phosphate/phosphate translocator, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 500.4 bits (1287), Expect = 2.9e-138 Identity = 257/267 (96.25%), Postives = 263/267 (98.50%), Query Frame = 1
BLAST of Lsi01G002890 vs. NCBI nr
Match: gi|449433798|ref|XP_004134684.1| (PREDICTED: triose phosphate/phosphate translocator, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 492.7 bits (1267), Expect = 6.1e-136 Identity = 252/267 (94.38%), Postives = 259/267 (97.00%), Query Frame = 1
BLAST of Lsi01G002890 vs. NCBI nr
Match: gi|79329946|ref|NP_001032017.1| (triose phosphate/phosphate translocator TPT [Arabidopsis thaliana]) HSP 1 Score: 487.6 bits (1254), Expect = 2.0e-134 Identity = 279/401 (69.58%), Postives = 307/401 (76.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |