Lsi01G000640 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G000640
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGermin-like protein 1
Locationchr01 : 700849 .. 702326 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTGTATTAATTAATTAATTCTCTCTCTTAGAGTAATGACTTCTTCTCGATCCTTCCTTTTAGTGTTTCTTGTTGCTACTTCTTCTCTTGTTGTTGCATCTGATCCAAGTCCTCTTCAAGATTTTTGTGTTGCAGATCTCAATAGTACAGGTATAAATATTTATAAATGGTTAAACTTAAAAGGGTTAAAAGGATGGATGGCTGTAAATTTATTTTTTATTTGTATTCTTTAATTCTGTCTCTTATTTATTGGCTTAAAAACTTGGGTTCCATTAGATAACTAATTTATTTTATTTTTATAAACTAAGCATATAAATATTACCCCCACCACCTTTACGTTTATTTGTTTTGTTATGCATTCTTTACTATATTTTAAAAAACTAGGTGAAGAATTTTGAAAATAAAAAAGTAGTTTTTTCTCCCTAAATTTATTTTTGTAGAAAATATGAAACCCGTGATAAAAGAAAAATTGGGAAAAAAGAACATACATTTAAAAAACAAAAACATAAATTCCTAGCAAATCATTTTTTAAAAAAAAATTTGAGAAACCTAGCAAATCACCTAACGATGAATAATATTCTTATATTGATCTTAATCTAATTTCTTAATGTATATAGGTTAATAGGCTTGATGTATAAGTTGTTATTTGTTTTGATTTTGCAGTGAAAGTGAATGGTGTGGTGTGCAAAGCCATTGTGAGTGCGGATGATTTCTTCTTCAGTGGGCTCGACAAAGCAGGCAATACATCAAATCCAGTTGGATCTAAAGTAACTGCAGTGAACGTAATGCAAATTCCAGGACTCAACACTTTGGGCATCTCTTTGGCTCGTGTGGATTATACTTCGTGGGGCATCAACCCTCCCCACACACACCCACGTGCCACCGAGATCTTGACAGTCCTTGAAGGCACTCTCTTGGTTGGTTTCATCACCTCTAACACTGAAAATCGACTTTTCACCAAAGTTCTTTACAAGGGAGACGTGTTTGTGTTTCCCATTGGACTCATTCACTTTCAACAGAACATTGGCTATGGACCGGCAGTGGCTCTAGCCGCTCTCAGCAGCCAGAACCCCGGCGTCATCACCATTGGAAATGCAGTGTTTGGGTCTATCCCTGATATTCCAACTAACATTCTGGCCAAAGCTTTCCAAGTTGACGATGCCACCATCGCCAAGATTCAGTCCAAATTCTAAGGCCTTCATATAGATAAGACTTGTTTGATATTTACAGCCAATTAGAATTTTCTTGCATTGAAATAAAAATATGAGTGTACGTGGCGTGTTAGAGGCTGTTTCATCTGTTGTCTTGTCCGTCAAAGTAGGTCAATCTTGTCTTACGTTTCAATTATCAATCTTGTTTTCTTTATTATTATTATTATTATTATTATTGTTATTTTTTGGTTTGTGATCAGTTTGTTGTTTTGCTTTGTCGGAATATTTTGTTTAATAAAAATTGATGGATTTATTTTATGCTTTA

mRNA sequence

CTTGTGTATTAATTAATTAATTCTCTCTCTTAGAGTAATGACTTCTTCTCGATCCTTCCTTTTAGTGTTTCTTGTTGCTACTTCTTCTCTTGTTGTTGCATCTGATCCAAGTCCTCTTCAAGATTTTTGTGTTGCAGATCTCAATAGTACAGTGAAAGTGAATGGTGTGGTGTGCAAAGCCATTGTGAGTGCGGATGATTTCTTCTTCAGTGGGCTCGACAAAGCAGGCAATACATCAAATCCAGTTGGATCTAAAGTAACTGCAGTGAACGTAATGCAAATTCCAGGACTCAACACTTTGGGCATCTCTTTGGCTCGTGTGGATTATACTTCGTGGGGCATCAACCCTCCCCACACACACCCACGTGCCACCGAGATCTTGACAGTCCTTGAAGGCACTCTCTTGGTTGGTTTCATCACCTCTAACACTGAAAATCGACTTTTCACCAAAGTTCTTTACAAGGGAGACGTGTTTGTGTTTCCCATTGGACTCATTCACTTTCAACAGAACATTGGCTATGGACCGGCAGTGGCTCTAGCCGCTCTCAGCAGCCAGAACCCCGGCGTCATCACCATTGGAAATGCAGTGTTTGGGTCTATCCCTGATATTCCAACTAACATTCTGGCCAAAGCTTTCCAAGTTGACGATGCCACCATCGCCAAGATTCAGTCCAAATTCTAAGGCCTTCATATAGATAAGACTTGTTTGATATTTACAGCCAATTAGAATTTTCTTGCATTGAAATAAAAATATGAGTGTACGTGGCGTGTTAGAGGCTGTTTCATCTGTTGTCTTGTCCGTCAAAGTAGGTCAATCTTGTCTTACGTTTCAATTATCAATCTTGTTTTCTTTATTATTATTATTATTATTATTATTGTTATTTTTTGGTTTGTGATCAGTTTGTTGTTTTGCTTTGTCGGAATATTTTGTTTAATAAAAATTGATGGATTTATTTTATGCTTTA

Coding sequence (CDS)

ATGACTTCTTCTCGATCCTTCCTTTTAGTGTTTCTTGTTGCTACTTCTTCTCTTGTTGTTGCATCTGATCCAAGTCCTCTTCAAGATTTTTGTGTTGCAGATCTCAATAGTACAGTGAAAGTGAATGGTGTGGTGTGCAAAGCCATTGTGAGTGCGGATGATTTCTTCTTCAGTGGGCTCGACAAAGCAGGCAATACATCAAATCCAGTTGGATCTAAAGTAACTGCAGTGAACGTAATGCAAATTCCAGGACTCAACACTTTGGGCATCTCTTTGGCTCGTGTGGATTATACTTCGTGGGGCATCAACCCTCCCCACACACACCCACGTGCCACCGAGATCTTGACAGTCCTTGAAGGCACTCTCTTGGTTGGTTTCATCACCTCTAACACTGAAAATCGACTTTTCACCAAAGTTCTTTACAAGGGAGACGTGTTTGTGTTTCCCATTGGACTCATTCACTTTCAACAGAACATTGGCTATGGACCGGCAGTGGCTCTAGCCGCTCTCAGCAGCCAGAACCCCGGCGTCATCACCATTGGAAATGCAGTGTTTGGGTCTATCCCTGATATTCCAACTAACATTCTGGCCAAAGCTTTCCAAGTTGACGATGCCACCATCGCCAAGATTCAGTCCAAATTCTAA

Protein sequence

MTSSRSFLLVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCKAIVSADDFFFSGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF
Homology
[Close]
BLAST of Lsi01G000640 vs. Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.8e-73
Identity = 142/198 (71.72%), Postives = 161/198 (81.31%), Query Frame = 1 

Query: 19  VVASDPSPLQDFCVADLNSTVKVNGVVCK--AIVSADDFFFSGLDKAGNTSNPVGSKVTA 78
           VVASDPS LQD CVAD  STV+VNGV CK    V+A+DFFFSGL  AGNT+N  GS VTA
Sbjct: 26  VVASDPSHLQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTA 85

Query: 79  VNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEGTLLVGFITSNTENRLF 138
           VNV Q+PGLNTLGISLAR+DY   G+NPPHTHPRATEILTVLEG+L VGF+TSN EN+LF
Sbjct: 86  VNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLF 145

Query: 139 TKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITIGNAVFGSIPDIPTNIL 198
           TKV+ KGDVFVFP GL+HFQ N G   AVA+ ALSSQNPGVIT+ NAVFGS P I  +IL
Sbjct: 146 TKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDIL 205

Query: 199 AKAFQVDDATIAKIQSKF 215
           AKAFQV+   + +IQ+KF
Sbjct: 206 AKAFQVEKTVVDQIQAKF 223

[Close]
BLAST of Lsi01G000640 vs. Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.4e-72
Identity = 146/216 (67.59%), Postives = 164/216 (75.93%), Query Frame = 1 

Query: 1   MTSSRSFLLVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCK--AIVSADDFFFS 60
           M S+  FLL  L  + S   ASDPS LQDFCVAD  S V VNG  CK  A ++ +DFFFS
Sbjct: 1   MASTWFFLLALLAVSISNAFASDPSQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFS 60

Query: 61  GLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVL 120
           GL  AGNTSN  GS VT VNV QI GLNTLGISLARVDY  +G+NPPH HPRATEILT+L
Sbjct: 61  GLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTIL 120

Query: 121 EGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVI 180
           EG+L VGF+TSN EN+LFTKVL KGDVFVFP GLIHFQ N G    +ALAALSSQNPGVI
Sbjct: 121 EGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVI 180

Query: 181 TIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           TI NAVFGS P I  +ILAKAFQV+   + +IQ++F
Sbjct: 181 TIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216

[Close]
BLAST of Lsi01G000640 vs. Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 9.3e-70
Identity = 148/219 (67.58%), Postives = 170/219 (77.63%), Query Frame = 1 

Query: 2   TSSRSFLLV--FLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCKAIV--SADDFFF 61
           +SS SFLLV   L   S   +ASDPSPLQDFCVADLNS V+VNG VCK  +  SADDFF 
Sbjct: 3   SSSFSFLLVAALLGLASWKAIASDPSPLQDFCVADLNSPVRVNGFVCKNPMNASADDFFK 62

Query: 62  SG-LDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILT 121
           +  LDK  +T+N VGS VT VNV+Q+PGLNTLGIS+AR+D+   G+NPPHTHPRATEI T
Sbjct: 63  AAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFT 122

Query: 122 VLEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIG-YGPAVALAALSSQNP 181
           VLEGTL VGF+TSN +NRL +KVL KGDVFVFP GLIHFQ N   + PAVA+AALSSQNP
Sbjct: 123 VLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNP 182

Query: 182 GVITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           GVITI NAVFGS P I  +IL KAFQVD   I  +Q++F
Sbjct: 183 GVITIANAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221

[Close]
BLAST of Lsi01G000640 vs. Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.5e-69
Identity = 137/197 (69.54%), Postives = 153/197 (77.66%), Query Frame = 1 

Query: 20  VASDPSPLQDFCVADLNSTVKVNGVVCKAI--VSADDFFFSGLDKAGNTSNPVGSKVTAV 79
           +ASDP  LQDFCV D  S V+VNG  CK    V A DFFFSGL  AGNT+N  GS VT V
Sbjct: 27  IASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTV 86

Query: 80  NVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEGTLLVGFITSNTENRLFT 139
           NV QIPGLNT+G+SL R+DY   G+NPPHTHPRATEI TVLEG+L VGF+ SN EN+LFT
Sbjct: 87  NVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNPENKLFT 146

Query: 140 KVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITIGNAVFGSIPDIPTNILA 199
           KVL KGDVFVFP GL+HFQ N G   AVALAALSSQNPGVIT+GNAVFGS P I  +ILA
Sbjct: 147 KVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILA 206

Query: 200 KAFQVDDATIAKIQSKF 215
           KAFQVD   I +IQ++F
Sbjct: 207 KAFQVDKNIIDRIQAQF 223

[Close]
BLAST of Lsi01G000640 vs. Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-67
Identity = 140/218 (64.22%), Postives = 164/218 (75.23%), Query Frame = 1 

Query: 1   MTSSRSFLLVFLVATSSLV-VASDPSPLQDFCVADLNSTVKVNGVVC--KAIVSADDFFF 60
           M SS   LL  L+A +S   +ASDPSPLQDFCVAD++S V VNG  C     V+AD FF 
Sbjct: 1   MASSSFLLLATLLAMASWQGMASDPSPLQDFCVADMHSPVLVNGFACLNPKDVNADHFFK 60

Query: 61  SGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTV 120
           + +      +N VGS VT +NVMQIPGLNTLGIS+AR+DY   G NPPHTHPRATEILTV
Sbjct: 61  AAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTV 120

Query: 121 LEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIG-YGPAVALAALSSQNPG 180
           LEGTL VGF+TSN +N+ F+KVL KGDVFVFP+GLIHFQ N   Y PAVA+AALSSQNPG
Sbjct: 121 LEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPG 180

Query: 181 VITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
            ITI NAVFGS P I  ++LAKAFQV+  TI  +Q++F
Sbjct: 181 AITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQF 218

[Close]
BLAST of Lsi01G000640 vs. TrEMBL
Match: A0A0A0KP70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525610 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.9e-94
Identity = 182/218 (83.49%), Postives = 192/218 (88.07%), Query Frame = 1 

Query: 1   MTSSRSFLLVF--LVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCK--AIVSADDFF 60
           M SS+  +L+    VATSSLV ASDPSPLQDFCVAD N TVKVNGVVCK    V+ +DFF
Sbjct: 1   MASSQLIILILAVFVATSSLVFASDPSPLQDFCVADPNCTVKVNGVVCKDPKAVTVEDFF 60

Query: 61  FSGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILT 120
           F+GLDKAGNTSN VGSKVTA NV QIPGLNTLGISLAR+DY  WGINPPHTHPRA+EILT
Sbjct: 61  FTGLDKAGNTSNAVGSKVTAANVAQIPGLNTLGISLARIDYAPWGINPPHTHPRASEILT 120

Query: 121 VLEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPG 180
           VLEGTLLVGF+TSNTENRLFTKVLYKGD FVFP+GLIHFQQNIGYGPAVALAALSSQNPG
Sbjct: 121 VLEGTLLVGFVTSNTENRLFTKVLYKGDAFVFPVGLIHFQQNIGYGPAVALAALSSQNPG 180

Query: 181 VITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           VITI NAVFGS PDIP NILAKAFQVD ATI KIQSKF
Sbjct: 181 VITIANAVFGSNPDIPANILAKAFQVDVATITKIQSKF 218

[Close]
BLAST of Lsi01G000640 vs. TrEMBL
Match: A0A0A0KKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.7e-86
Identity = 164/214 (76.64%), Postives = 180/214 (84.11%), Query Frame = 1 

Query: 3   SSRSFLLVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCKA--IVSADDFFFSGL 62
           ++ +F L F   T S+ +ASDPSPLQDFCVAD NS VKVNG VCK   +V A DFF SGL
Sbjct: 2   AASAFFLTFFALTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSGL 61

Query: 63  DKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEG 122
           + AG+T+NPVGS VT  NV+QIPGLNTLGIS+ R+DY  WGIN PHTHPRATEILTVLEG
Sbjct: 62  NVAGDTNNPVGSVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLEG 121

Query: 123 TLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITI 182
           TLLVGF+TSNTENRL TK L KGDVFVFP+GL+HFQQNIGYGPAVA+AALSSQNPGVITI
Sbjct: 122 TLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVITI 181

Query: 183 GNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
            NAVFGS PDIPTNILAKAFQ D A IA IQSKF
Sbjct: 182 ANAVFGSKPDIPTNILAKAFQTDSAIIANIQSKF 215

[Close]
BLAST of Lsi01G000640 vs. TrEMBL
Match: A0A0A0KIA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525550 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 8.4e-86
Identity = 167/215 (77.67%), Postives = 187/215 (86.98%), Query Frame = 1 

Query: 3   SSRSFLLVFLVATSSLVV-ASDPSPLQDFCVADLNSTVKVNGVVCKA--IVSADDFFFSG 62
           +S++ +  FL+ T ++ V ASDPS LQDFCVAD  +TVKVNGVVCK   +V+ADDFFFSG
Sbjct: 2   ASKAIIFGFLIVTYAVAVFASDPSHLQDFCVADPTNTVKVNGVVCKESEVVTADDFFFSG 61

Query: 63  LDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLE 122
           L K GNTSNPVGSKVT VNV+QIPGLNTLGISLAR+DY   GINPPHTHPRATEILTVLE
Sbjct: 62  LHKVGNTSNPVGSKVTPVNVVQIPGLNTLGISLARIDYAPLGINPPHTHPRATEILTVLE 121

Query: 123 GTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVIT 182
           GTL VGF+TSNTENRLFTKVL KGDVFVFP+GL+HFQ NIG+GPAVALAALSSQNPGVIT
Sbjct: 122 GTLHVGFVTSNTENRLFTKVLQKGDVFVFPVGLVHFQHNIGHGPAVALAALSSQNPGVIT 181

Query: 183 IGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           IGNAVFGS PDI T+IL+KAFQ D + IA IQ+KF
Sbjct: 182 IGNAVFGSKPDISTDILSKAFQTDKSIIAGIQAKF 216

[Close]
BLAST of Lsi01G000640 vs. TrEMBL
Match: A0A0A0KIX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.0e-83
Identity = 165/214 (77.10%), Postives = 177/214 (82.71%), Query Frame = 1 

Query: 3   SSRSFLLVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCKA--IVSADDFFFSGL 62
           +S+ F L FL  T S+ +ASDPSPLQDFCVAD NS VKVNGVVCK    V A DF  SGL
Sbjct: 2   ASQLFFLTFLAITCSIALASDPSPLQDFCVADPNSPVKVNGVVCKDPNAVEAKDFSMSGL 61

Query: 63  DKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEG 122
           + AG+T+N VGS VT  NV+QIPGLNTLGIS+ R+DY  WGIN PHTHPRATEILTVLEG
Sbjct: 62  NVAGDTNNFVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLEG 121

Query: 123 TLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITI 182
           TLLVGF+TSN ENRL TK L KGDVFVFPIGLIHFQQNIGYGPAVA+AALSSQNPGVITI
Sbjct: 122 TLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGYGPAVAIAALSSQNPGVITI 181

Query: 183 GNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
            NAVFGS PDI TNILAKAFQ D A IA IQSKF
Sbjct: 182 ANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 215

[Close]
BLAST of Lsi01G000640 vs. TrEMBL
Match: A0A0A0KIB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.3e-82
Identity = 162/216 (75.00%), Postives = 179/216 (82.87%), Query Frame = 1 

Query: 1   MTSSRSFLLVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCK--AIVSADDFFFS 60
           M S   F   FL+ + S+  ASDPSPLQDFCVAD NS VKVNG+VCK  ++V A DFFFS
Sbjct: 1   MASQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFS 60

Query: 61  GLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVL 120
           GL  A +T+ P GS+VT VNV+QIPGLNTLGISLAR+DY  WGIN PHTHPRATEILTVL
Sbjct: 61  GLHVAKDTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVL 120

Query: 121 EGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVI 180
           EG LLVGFITSN ENRL TK L+KGDVFVFP+GLIHFQQNIG+  AVA+AALSSQNPGVI
Sbjct: 121 EGKLLVGFITSNPENRLITKTLHKGDVFVFPVGLIHFQQNIGHHRAVAIAALSSQNPGVI 180

Query: 181 TIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           TI NAVFGS PDIPT+ILAKAFQ D ATI KIQ+KF
Sbjct: 181 TIANAVFGSKPDIPTDILAKAFQTDPATITKIQAKF 216

[Close]
BLAST of Lsi01G000640 vs. TAIR10
Match: AT5G38960.1 (AT5G38960.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 254.2 bits (648), Expect = 7.1e-68
Identity = 140/214 (65.42%), Postives = 161/214 (75.23%), Query Frame = 1 

Query: 9   LVFLVATSSL--VVASDPSPLQDFCVADLNSTVK---VNGVVCK--AIVSADDFFFSGLD 68
           +++L+A S+L   +ASDPSPLQDFC+  +N+      VNG  CK   +V+ADDF+FSGLD
Sbjct: 8   ILYLLAASTLPFAIASDPSPLQDFCIG-VNTPANALFVNGKFCKDPKLVTADDFYFSGLD 67

Query: 69  KAGNT-SNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEG 128
           KA  T S+PVGS VT VNV QIPGLNTLGISL R+DY   G NPPHTHPRATEIL V EG
Sbjct: 68  KARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEG 127

Query: 129 TLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITI 188
           TL VGF +S  ENRLF K L KGDVFVFP GLIHFQ NIG  PAVA A+LSSQNPGVI I
Sbjct: 128 TLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIII 187

Query: 189 GNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           GN +FGS P I  N+LAKAFQ+D   I ++Q KF
Sbjct: 188 GNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKF 220

[Close]
BLAST of Lsi01G000640 vs. TAIR10
Match: AT5G38930.1 (AT5G38930.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 250.4 bits (638), Expect = 1.0e-66
Identity = 142/217 (65.44%), Postives = 158/217 (72.81%), Query Frame = 1 

Query: 4   SRSFL--LVFLVATSSLVVASDPSPLQDFCVADLNST--VKVNGVVCK--AIVSADDFFF 63
           S SFL  L  L  T  L +ASDPS LQDFCV+  +S   V VNG  CK   +V+ADDFFF
Sbjct: 5   SLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFF 64

Query: 64  SGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTV 123
            GL  A   ++PVGS VTAVNV  + GLNTLGISL R+DY   G NPPHTHPRATEIL V
Sbjct: 65  PGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVV 124

Query: 124 LEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGV 183
             GTLLVGF+TSN +NRLFTKVL +GDVFVFP GLIHFQ NIG  PAVA AALSSQNPGV
Sbjct: 125 ELGTLLVGFVTSNPDNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGV 184

Query: 184 ITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           ITI   VFG+ P I  NILAKAFQVD   +  +Q+KF
Sbjct: 185 ITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221

[Close]
BLAST of Lsi01G000640 vs. TAIR10
Match: AT5G38940.1 (AT5G38940.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 250.4 bits (638), Expect = 1.0e-66
Identity = 140/217 (64.52%), Postives = 159/217 (73.27%), Query Frame = 1 

Query: 4   SRSFLLVF--LVATSSLVVASDPSPLQDFCVADLNST--VKVNGVVCK--AIVSADDFFF 63
           S SFL V   L  T  L +ASDPS LQDFCV+   S   V VNG  CK   +V+ADDFFF
Sbjct: 5   SLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFF 64

Query: 64  SGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTV 123
           SGL  A   ++PVGS VTAVNV  + GLNTLGISL R+DY   G NPPHTHPRATEIL V
Sbjct: 65  SGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVV 124

Query: 124 LEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGV 183
            +GTLLVGF+TSN +NRLF+KVL +GDVFVFP GLIHFQ NIG  PAVA AALSSQNPGV
Sbjct: 125 EQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGV 184

Query: 184 ITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           ITI N VFG+ P I   ILAKAFQ++   +  +Q+KF
Sbjct: 185 ITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]
BLAST of Lsi01G000640 vs. TAIR10
Match: AT5G39110.1 (AT5G39110.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 246.1 bits (627), Expect = 1.9e-65
Identity = 136/220 (61.82%), Postives = 162/220 (73.64%), Query Frame = 1 

Query: 1   MTSSRSFLLVFLVA-TSSLVVASDPSPLQDFCVA--DLNSTVKVNGVVCK--AIVSADDF 60
           M  S+S +L+ L A   S   A+DPSPLQDFCVA  DL + V VNG  CK      A+DF
Sbjct: 1   MRFSKSLILITLSALVISFAEANDPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDF 60

Query: 61  FFSGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEIL 120
           F+SGL++AG T+N V S VT VNV QIPGLNTLGISL R+DY  +G NPPHTHPRATEIL
Sbjct: 61  FYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEIL 120

Query: 121 TVLEGTLLVGFITSNTE-NRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQN 180
            ++EGTL VGF++SN + NRLF KVL  GDVFVFPIG+IHFQ NIG  PAVA A LSSQN
Sbjct: 121 VLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQN 180

Query: 181 PGVITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
            GVITI + VFGS P I  +ILA+AFQ+D   +  +++KF
Sbjct: 181 AGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 220

[Close]
BLAST of Lsi01G000640 vs. TAIR10
Match: AT4G14630.1 (AT4G14630.1 germin-like protein 9)

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-65
Identity = 138/219 (63.01%), Postives = 160/219 (73.06%), Query Frame = 1 

Query: 4   SRSFL--LVFLVATSSLVVASDPSPLQDFCVADLNST---VKVNGVVCK--AIVSADDFF 63
           S SFL  L     T  LV+ASDPSPLQDFCV  +N+    V VNG  CK   IV ADDFF
Sbjct: 5   SLSFLAALSLFALTLPLVIASDPSPLQDFCVG-VNTPADGVFVNGKFCKDPRIVFADDFF 64

Query: 64  FSGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILT 123
           FS L++ GNT+N VGS VT VNV  + GLNTLGISL R+DY   G NPPHTHPRATEIL 
Sbjct: 65  FSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILV 124

Query: 124 VLEGTLLVGFITSNTE-NRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNP 183
           V +GTLLVGFI+SN + NRLF K L  GDVFVFP GLIHFQ N+G  PAVA+AALSSQN 
Sbjct: 125 VQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNA 184

Query: 184 GVITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           GVITI N +FGS PD+  N+LA+AFQ+D   +  +Q++F
Sbjct: 185 GVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222

[Close]
BLAST of Lsi01G000640 vs. NCBI nr
Match: gi|659078077|ref|XP_008439537.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 353.2 bits (905), Expect = 3.2e-94
Identity = 182/217 (83.87%), Postives = 192/217 (88.48%), Query Frame = 1 

Query: 1   MTSSRSFL-LVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCK--AIVSADDFFF 60
           M SS+  L L   VATSSLV ASDPSPLQDFCVAD N TVKVNGVVCK   +V+ DDFFF
Sbjct: 1   MASSQLILILAVFVATSSLVFASDPSPLQDFCVADPNCTVKVNGVVCKDPKVVTVDDFFF 60

Query: 61  SGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTV 120
           SGLDKAGNTSN VGSKVTA NV+QIPGLNTLGISLAR+DY  WGINPPHTHPRA+EILTV
Sbjct: 61  SGLDKAGNTSNAVGSKVTAANVVQIPGLNTLGISLARIDYAPWGINPPHTHPRASEILTV 120

Query: 121 LEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGV 180
           LEGTLLVGF++SN ENRLFTKVLYKGD FVFP+GLIHFQQNIGYGP VALAALSSQNPGV
Sbjct: 121 LEGTLLVGFVSSNPENRLFTKVLYKGDAFVFPVGLIHFQQNIGYGPVVALAALSSQNPGV 180

Query: 181 ITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           ITI NAVFGS PDIP NILAKAFQVD+ATI KIQSKF
Sbjct: 181 ITIANAVFGSNPDIPANILAKAFQVDEATITKIQSKF 217

[Close]
BLAST of Lsi01G000640 vs. NCBI nr
Match: gi|449433664|ref|XP_004134617.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 7.1e-94
Identity = 182/218 (83.49%), Postives = 192/218 (88.07%), Query Frame = 1 

Query: 1   MTSSRSFLLVF--LVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCK--AIVSADDFF 60
           M SS+  +L+    VATSSLV ASDPSPLQDFCVAD N TVKVNGVVCK    V+ +DFF
Sbjct: 1   MASSQLIILILAVFVATSSLVFASDPSPLQDFCVADPNCTVKVNGVVCKDPKAVTVEDFF 60

Query: 61  FSGLDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILT 120
           F+GLDKAGNTSN VGSKVTA NV QIPGLNTLGISLAR+DY  WGINPPHTHPRA+EILT
Sbjct: 61  FTGLDKAGNTSNAVGSKVTAANVAQIPGLNTLGISLARIDYAPWGINPPHTHPRASEILT 120

Query: 121 VLEGTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPG 180
           VLEGTLLVGF+TSNTENRLFTKVLYKGD FVFP+GLIHFQQNIGYGPAVALAALSSQNPG
Sbjct: 121 VLEGTLLVGFVTSNTENRLFTKVLYKGDAFVFPVGLIHFQQNIGYGPAVALAALSSQNPG 180

Query: 181 VITIGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           VITI NAVFGS PDIP NILAKAFQVD ATI KIQSKF
Sbjct: 181 VITIANAVFGSNPDIPANILAKAFQVDVATITKIQSKF 218

[Close]
BLAST of Lsi01G000640 vs. NCBI nr
Match: gi|449433660|ref|XP_004134615.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.4e-86
Identity = 164/214 (76.64%), Postives = 180/214 (84.11%), Query Frame = 1 

Query: 3   SSRSFLLVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCKA--IVSADDFFFSGL 62
           ++ +F L F   T S+ +ASDPSPLQDFCVAD NS VKVNG VCK   +V A DFF SGL
Sbjct: 2   AASAFFLTFFALTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSGL 61

Query: 63  DKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEG 122
           + AG+T+NPVGS VT  NV+QIPGLNTLGIS+ R+DY  WGIN PHTHPRATEILTVLEG
Sbjct: 62  NVAGDTNNPVGSVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLEG 121

Query: 123 TLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITI 182
           TLLVGF+TSNTENRL TK L KGDVFVFP+GL+HFQQNIGYGPAVA+AALSSQNPGVITI
Sbjct: 122 TLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVITI 181

Query: 183 GNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
            NAVFGS PDIPTNILAKAFQ D A IA IQSKF
Sbjct: 182 ANAVFGSKPDIPTNILAKAFQTDSAIIANIQSKF 215

[Close]
BLAST of Lsi01G000640 vs. NCBI nr
Match: gi|449433658|ref|XP_004134614.1| (PREDICTED: putative germin-like protein 2-3 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 1.2e-85
Identity = 167/215 (77.67%), Postives = 187/215 (86.98%), Query Frame = 1 

Query: 3   SSRSFLLVFLVATSSLVV-ASDPSPLQDFCVADLNSTVKVNGVVCKA--IVSADDFFFSG 62
           +S++ +  FL+ T ++ V ASDPS LQDFCVAD  +TVKVNGVVCK   +V+ADDFFFSG
Sbjct: 2   ASKAIIFGFLIVTYAVAVFASDPSHLQDFCVADPTNTVKVNGVVCKESEVVTADDFFFSG 61

Query: 63  LDKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLE 122
           L K GNTSNPVGSKVT VNV+QIPGLNTLGISLAR+DY   GINPPHTHPRATEILTVLE
Sbjct: 62  LHKVGNTSNPVGSKVTPVNVVQIPGLNTLGISLARIDYAPLGINPPHTHPRATEILTVLE 121

Query: 123 GTLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVIT 182
           GTL VGF+TSNTENRLFTKVL KGDVFVFP+GL+HFQ NIG+GPAVALAALSSQNPGVIT
Sbjct: 122 GTLHVGFVTSNTENRLFTKVLQKGDVFVFPVGLVHFQHNIGHGPAVALAALSSQNPGVIT 181

Query: 183 IGNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
           IGNAVFGS PDI T+IL+KAFQ D + IA IQ+KF
Sbjct: 182 IGNAVFGSKPDISTDILSKAFQTDKSIIAGIQAKF 216

[Close]
BLAST of Lsi01G000640 vs. NCBI nr
Match: gi|659078083|ref|XP_008439540.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 1.3e-84
Identity = 165/214 (77.10%), Postives = 180/214 (84.11%), Query Frame = 1 

Query: 3   SSRSFLLVFLVATSSLVVASDPSPLQDFCVADLNSTVKVNGVVCKA--IVSADDFFFSGL 62
           +S+ F L FL  TSS+ +ASDPSPLQDFCVAD N+ VKVNGVVCK    V A DFF SGL
Sbjct: 2   ASQLFFLAFLAITSSIALASDPSPLQDFCVADPNNPVKVNGVVCKDPNAVEAKDFFMSGL 61

Query: 63  DKAGNTSNPVGSKVTAVNVMQIPGLNTLGISLARVDYTSWGINPPHTHPRATEILTVLEG 122
           + AG+T+N VGSKVT  NV+QIPGLNTLGIS+ R+DY  WGIN PHTHPRATEILTVLEG
Sbjct: 62  NVAGDTNNLVGSKVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLEG 121

Query: 123 TLLVGFITSNTENRLFTKVLYKGDVFVFPIGLIHFQQNIGYGPAVALAALSSQNPGVITI 182
           TLLVGF+TSN ENRL TK L KGDVFVFPIGLIHFQQNIG+GPAVA+AALSSQNPGVITI
Sbjct: 122 TLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGHGPAVAIAALSSQNPGVITI 181

Query: 183 GNAVFGSIPDIPTNILAKAFQVDDATIAKIQSKF 215
            NAVFGS PDI TNILAKAFQ D A IA IQ+KF
Sbjct: 182 ANAVFGSKPDIATNILAKAFQTDSAIIANIQAKF 215

The following BLAST results are available for this feature:
BLAST of Lsi01G000640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL23_ORYSJ1.8e-7371.72Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800... [more]
GL21_ORYSJ4.4e-7267.59Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600... [more]
GL82_ORYSJ9.3e-7067.58Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1[more]
GL22_ORYSJ3.5e-6969.54Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700... [more]
GL811_ORYSJ3.3e-6764.22Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV... [more]
BLAST of Lsi01G000640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP70_CUCSA4.9e-9483.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525610 PE=3 SV=1[more]
A0A0A0KKX1_CUCSA1.7e-8676.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1[more]
A0A0A0KIA8_CUCSA8.4e-8677.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525550 PE=3 SV=1[more]
A0A0A0KIX1_CUCSA1.0e-8377.10Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1[more]
A0A0A0KIB9_CUCSA4.3e-8275.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1[more]
BLAST of Lsi01G000640 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38960.17.1e-6865.42 RmlC-like cupins superfamily protein[more]
AT5G38930.11.0e-6665.44 RmlC-like cupins superfamily protein[more]
AT5G38940.11.0e-6664.52 RmlC-like cupins superfamily protein[more]
AT5G39110.11.9e-6561.82 RmlC-like cupins superfamily protein[more]
AT4G14630.12.5e-6563.01 germin-like protein 9[more]
BLAST of Lsi01G000640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078077|ref|XP_008439537.1|3.2e-9483.87PREDICTED: putative germin-like protein 2-1 [Cucumis melo][more]
gi|449433664|ref|XP_004134617.1|7.1e-9483.49PREDICTED: putative germin-like protein 2-1 [Cucumis sativus][more]
gi|449433660|ref|XP_004134615.1|2.4e-8676.64PREDICTED: putative germin-like protein 2-1 [Cucumis sativus][more]
gi|449433658|ref|XP_004134614.1|1.2e-8577.67PREDICTED: putative germin-like protein 2-3 [Cucumis sativus][more]
gi|659078083|ref|XP_008439540.1|1.3e-8477.10PREDICTED: putative germin-like protein 2-1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
GO:0030145manganese ion binding
Vocabulary: INTERPRO
TermDefinition
IPR019780Germin_Mn-BS
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf
IPR006045Cupin_1
IPR001929Germin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0004784 superoxide dismutase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G000640.1Lsi01G000640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 171..186
score: 8.3E-28coord: 106..126
score: 8.3E-28coord: 138..158
score: 8.3
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 59..206
score: 4.9
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 58..208
score: 1.3
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 23..213
score: 1.04
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 22..213
score: 2.5
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 101..114
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 2..214
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G000640Csa6G525550Cucumber (Chinese Long) v2culsiB434
Lsi01G000640CSPI06G36940Wild cucumber (PI 183967)cpilsiB439
Lsi01G000640Cucsa.048340Cucumber (Gy14) v1cgylsiB022
Lsi01G000640CmaCh03G014530Cucurbita maxima (Rimu)cmalsiB602
Lsi01G000640CmoCh07G000530Cucurbita moschata (Rifu)cmolsiB774
Lsi01G000640CmoCh03G014540Cucurbita moschata (Rifu)cmolsiB588
Lsi01G000640MELO3C007061Melon (DHL92) v3.5.1lsimeB149
Lsi01G000640ClCG01G025250Watermelon (Charleston Gray)lsiwcgB127
Lsi01G000640MELO3C007062.2Melon (DHL92) v3.6.1lsimedB156
Lsi01G000640Cla97C01G025300Watermelon (97103) v2lsiwmbB115
Lsi01G000640Bhi03G000153Wax gourdlsiwgoB179
Lsi01G000640Cp4.1LG10g06450Cucurbita pepo (Zucchini)cpelsiB049
Lsi01G000640CsGy6G036310Cucumber (Gy14) v2cgyblsiB398
Lsi01G000640Carg19322Silver-seed gourdcarlsiB273
Lsi01G000640Carg21410Silver-seed gourdcarlsiB361
Lsi01G000640CsaV3_6G052430Cucumber (Chinese Long) v3cuclsiB462
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G000640Cucumber (Gy14) v1cgylsiB277
Lsi01G000640Cucurbita maxima (Rimu)cmalsiB200
Lsi01G000640Cucurbita maxima (Rimu)cmalsiB786
Lsi01G000640Cucurbita moschata (Rifu)cmolsiB190
Lsi01G000640Cucurbita moschata (Rifu)cmolsiB355
Lsi01G000640Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G000640Wild cucumber (PI 183967)cpilsiB017
Lsi01G000640Cucumber (Chinese Long) v2culsiB018
Lsi01G000640Melon (DHL92) v3.5.1lsimeB128
Lsi01G000640Watermelon (97103) v1lsiwmB144
Lsi01G000640Silver-seed gourdcarlsiB669
Lsi01G000640Cucumber (Chinese Long) v3cuclsiB019
Lsi01G000640Wax gourdlsiwgoB191
Lsi01G000640Bottle gourd (USVL1VR-Ls)lsilsiB068