Cucsa.398120 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAAACGTCTTTTTTTCAGCAATTTGGATTACAGGCAGCCCACAGAGAATCAATATTTTGATTTGGATTATGGCCTTCAGGCCCCTCAATAGCTCTGAAATCTTGCAAAAGAAAGCACCCAATAAAAGCCTCTCCCCCTCGATCTGTCCTCTATGTTTGAAGGTTAGTGAGAATCTTTCTCATATTTTCCTGAACGGTCCTGTCTCTTCCTTCTGTTGGGTAAGAATTTTCTCATTGTTTAATTTAACTTGGGTATTTGATGTTTCACTAAGTGCTATTCTGTTGGTCCAAGTTTGCCCAAATCAAGTATCATATGGGAAAATTTGTCAAAAGCTTTACTTTCAGAATTATGGTTCAAACAACAACGTATCTTCCATGATAAAGCAAGACCAAGGGCTGAAATTATGTATGCAGCAGAACTTAATGTTGCAGCTTGATGTCCCCCTAAAAAGGAGTTCGTTAATTATTCCATCCAAGACACTTACTTTAATTGGGCTGCTTTTCTTTCTCAACCTGCCTAATCCTATGCTGCCTCAGTTTCAATGTTTGCAGATTACACAAACTGAAGCCCTCTATTGCTTTTGGAGCCTTGAAGGATTGCCCCCTGTTTTAGTTTGCTTTTTTGTCCCCCCCCCACACCCACATTTCTTGTCGTTTTCTTCCAGTCCCATTCCGTTTTCTGGACCTTTGTACTAAGCTGGATGCTTTTATTATTCTTTCAATTGGTTGTGCTTGGGATATGATGTTTGGCACTATGGGGGTGTTAACCTAGTTGAGATGTCTAGGACTCCCTTGAATACTACTTCTTTTTAGCTCTCTTTGTATAAATCTCTTGTACGTTGAGTTCATATTAATAAAGAAGTTTTCATCTCCGTTTTAAAAAAAAAAAGAAGATGCTTAAAAGAAGCTGAAATTGCATAATTTCAATCCTTACTCTCCCTCTTCTCATCTGAAAAAGTTTTTGATTATGAAGACCACAAAATTTGGTCAATTGACCACCAAGGCCGTTTTACTGTTAAATTTTTCTCGGCGCACTTGCATTCCCCCCCTCCAATGGATGAACGTATATTTAAAGCCTTGTGGAAGTCAAACAGCCCCCGGAGAGTTAATATTCTTATTTGGGTCATGATTTTTGGGTCCCTTAACAGTGCTGATATTCTCCAAAAGATGGTTCCTAACAAGTGTTTACTACCCTCTGTCCCCATTGCTTGAAGGCTAATGAGACTTTACTCCATCTCTTTTTGCTATGCCCTTTCTCTTCTTTCTGGTGGAACAGATTCTTCTCCATTTTCAACATTGCTTGGGTTTTTGATGGCTCCCTTTGTTCCTCAGTTCTTCAGCTTTTGGAGGGTCCACCGCTTCCAAAGAAGCCAAGACTAATATGGTTGAATTTGCTAAAAGCTATCCTCTCTGAACTGTGGTTTGAGAGAAACCAGCTGATTTTTCATGACAAAGGAAAACCAAGTCCAAAAACCCTTCTCTCCGCCGAGCGAAATGCAGCAGCTTGGTGTTCCTTGAACAAGGATTCTGGGGCTTACTCTATTCAAGATACTTGTCTCAATTGGGCAGCTTTTCTTTCCCAACCAACCCTTTAATCTTTGTTTTGGCAGTCCTTTTTTGGAGCTGATTATCTACTCTGTTTTGGATCTTTCAGCAGCTGTTTTTGTATTGCCTTTATTTTATCATTTTCTCTGTCTTGGCCCTGTGTACTTATGCTGGACTCATGTATGTATTATCTAGTACATCTTCTATTTTGGTCAGTCTTATAATTGGGATATGAAGTTTTGGTGCTAAGGGGGTGTCAACCTAGTTAAGATGCTTGGGTACACCTCGCCTTTTGTTCTTTAGGCTTCTTTATTACTCTCAATGTATATACCTCCTTTGAGATTTTTTTTATTAATAAAGAAGTTTGTCTCCTTTTCAAAAAATAAAAAACAATCAATGAAATCGTTCCTTACTAAGAAAATGTTCAGCAATTTGAATTATAGAAGACAAAACATGTAAATCACCGTGAAAACTTTAGAGCATGATCTTTTGTTATGCGAATTTATATTTCCTCTGACTCATACATGCACCACTACAAACTTCCAGAAATTCCAGAAGTCTGGTTCCCTTCAAGCTTAAATGTGTGCTACTATCAGATTTGATCAGTGCTATACTTTCATGA ataaacgtctttttttcagcaatttggattacaggcagcccacagagaatcaatattttgatttggattatggccttcaggcccctcaatagctctgaaatcttgcaaaagaaagcacccaataaaagcctctccccctcgatctgtcctctatgtttgaaggctaatgagactttactccatctctttttgctatgccctttctcttctttctggtggaacagattcttctccattttcaacattgcttgggtttttgatggctccctttgttcctcagttcttcagcttttggagggtccaccgcttccaaagaagccaagactaatatggttgaatttgctaaaagctatcctctctgaactgtggtttgagagaaaccagctgatttttcatgacaaaggaaaaccaaCTGATTATCTACTCTGTTTTGGATCTTTCAGCAGCTGTTTTTGTATTGCCTTTATTTTATCATTTTCTCTGTCTTGGCCCTGTGTACTTATGCTGGACTCATATTTGATCAGTGCTATACTTTCATGA ATAAACGTCTTTTTTTCAGCAATTTGGATTACAGGCAGCCCACAGAGAATCAATATTTTGATTTGGATTATGGCCTTCAGGCCCCTCAATAGCTCTGAAATCTTGCAAAAGAAAGCACCCAATAAAAGCCTCTCCCCCTCGATCTGTCCTCTATGTTTGAAGGCTAATGAGACTTTACTCCATCTCTTTTTGCTATGCCCTTTCTCTTCTTTCTGGTGGAACAGATTCTTCTCCATTTTCAACATTGCTTGGGTTTTTGATGGCTCCCTTTGTTCCTCAGTTCTTCAGCTTTTGGAGGGTCCACCGCTTCCAAAGAAGCCAAGACTAATATGGTTGAATTTGCTAAAAGCTATCCTCTCTGAACTGTGGTTTGAGAGAAACCAGCTGATTTTTCATGACAAAGGAAAACCAACTGATTATCTACTCTGTTTTGGATCTTTCAGCAGCTGTTTTTGTATTGCCTTTATTTTATCATTTTCTCTGTCTTGGCCCTGTGTACTTATGCTGGACTCATATTTGATCAGTGCTATACTTTCATGA INVFFSAIWITGSPQRINILIWIMAFRPLNSSEILQKKAPNKSLSPSICPLCLKANETLLHLFLLCPFSSFWWNRFFSIFNIAWVFDGSLCSSVLQLLEGPPLPKKPRLIWLNLLKAILSELWFERNQLIFHDKGKPTDYLLCFGSFSSCFCIAFILSFSLSWPCVLMLDSYLISAILS*
BLAST of Cucsa.398120 vs. TrEMBL
Match: A5BCI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029474 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.7e-19 Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = 1
BLAST of Cucsa.398120 vs. TrEMBL
Match: A5BI72_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000131 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18 Identity = 49/148 (33.11%), Postives = 81/148 (54.73%), Query Frame = 1
BLAST of Cucsa.398120 vs. TrEMBL
Match: A5AI05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010721 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.2e-18 Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = 1
BLAST of Cucsa.398120 vs. TrEMBL
Match: A5BTG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030741 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.2e-18 Identity = 48/148 (32.43%), Postives = 82/148 (55.41%), Query Frame = 1
BLAST of Cucsa.398120 vs. TrEMBL
Match: A5AG22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040551 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.8e-17 Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 1
BLAST of Cucsa.398120 vs. NCBI nr
Match: gi|147811389|emb|CAN65484.1| (hypothetical protein VITISV_029474 [Vitis vinifera]) HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18 Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = 1
BLAST of Cucsa.398120 vs. NCBI nr
Match: gi|147839313|emb|CAN72359.1| (hypothetical protein VITISV_000131 [Vitis vinifera]) HSP 1 Score: 101.3 bits (251), Expect = 1.8e-18 Identity = 49/148 (33.11%), Postives = 81/148 (54.73%), Query Frame = 1
BLAST of Cucsa.398120 vs. NCBI nr
Match: gi|147845854|emb|CAN80093.1| (hypothetical protein VITISV_010721 [Vitis vinifera]) HSP 1 Score: 100.5 bits (249), Expect = 3.1e-18 Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = 1
BLAST of Cucsa.398120 vs. NCBI nr
Match: gi|147815645|emb|CAN61757.1| (hypothetical protein VITISV_030741 [Vitis vinifera]) HSP 1 Score: 98.6 bits (244), Expect = 1.2e-17 Identity = 48/148 (32.43%), Postives = 82/148 (55.41%), Query Frame = 1
BLAST of Cucsa.398120 vs. NCBI nr
Match: gi|147844292|emb|CAN80039.1| (hypothetical protein VITISV_040551 [Vitis vinifera]) HSP 1 Score: 97.4 bits (241), Expect = 2.6e-17 Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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