Cucsa.397290 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAGGGTGCTGCAAACCGCCGGCAGCGTGCGGGTACAAGTACGAGAACCCAACGACATGGGAGAATCCGGAGAACCCGACGGCGGACCCGGATTGCTTGTTATGGAGCAACGAGAGGAGTGGACTGTGCTACGATTGCGACGGATGTAAGGCGGGGCTGCTGGAGAATTTAAGGCAGGAGTGGCGGAAGGCGAACGGTGTTCTGGTGGTGGCGGTGGTGGTTCTGATATTCGTATATCTCGTTGCATGCGCCGCTTACAAGAATGCGCAAATCCAGAATATATCTGTTCGGTATAAaCATGGGTGGATTTGA TCAGGGTGCTGCAAACCGCCGGCAGCGTGCGGGTACAAGTACGAGAACCCAACGACATGGGAGAATCCGGAGAACCCGACGGCGGACCCGGATTGCTTGTTATGGAGCAACGAGAGGAGTGGACTGTGCTACGATTGCGACGGATGTAAGGCGGGGCTGCTGGAGAATTTAAGGCAGGAGTGGCGGAAGGCGAACGGTGTTCTGGTGGTGGCGGTGGTGGTTCTGATATTCGTATATCTCGTTGCATGCGCCGCTTACAAGAATGCGCAAATCCAGAATATATCTGTTCGGTATAAACATGGGTGGATTTGA TCAGGGTGCTGCAAACCGCCGGCAGCGTGCGGGTACAAGTACGAGAACCCAACGACATGGGAGAATCCGGAGAACCCGACGGCGGACCCGGATTGCTTGTTATGGAGCAACGAGAGGAGTGGACTGTGCTACGATTGCGACGGATGTAAGGCGGGGCTGCTGGAGAATTTAAGGCAGGAGTGGCGGAAGGCGAACGGTGTTCTGGTGGTGGCGGTGGTGGTTCTGATATTCGTATATCTCGTTGCATGCGCCGCTTACAAGAATGCGCAAATCCAGAATATATCTGTTCGGTATAAaCATGGGTGGATTTGA SGCCKPPAACGYKYENPTTWENPENPTADPDCLLWSNERSGLCYDCDGCKAGLLENLRQEWRKANGVLVVAVVVLIFVYLVACAAYKNAQIQNISVRYKHGWI*
BLAST of Cucsa.397290 vs. Swiss-Prot
Match: TET2_ARATH (Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 7.8e-38 Identity = 64/103 (62.14%), Postives = 84/103 (81.55%), Query Frame = 1
BLAST of Cucsa.397290 vs. Swiss-Prot
Match: TRN2_ARATH (Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28 Identity = 51/102 (50.00%), Postives = 76/102 (74.51%), Query Frame = 1
BLAST of Cucsa.397290 vs. Swiss-Prot
Match: TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.9e-23 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 1
BLAST of Cucsa.397290 vs. Swiss-Prot
Match: TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.5e-22 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
BLAST of Cucsa.397290 vs. Swiss-Prot
Match: TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.0e-22 Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 1
BLAST of Cucsa.397290 vs. TrEMBL
Match: B9RK98_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1047740 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-40 Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 1
BLAST of Cucsa.397290 vs. TrEMBL
Match: A0A067KPT3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07390 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 2.9e-39 Identity = 70/103 (67.96%), Postives = 87/103 (84.47%), Query Frame = 1
BLAST of Cucsa.397290 vs. TrEMBL
Match: V4UF67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009193mg PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 3.2e-38 Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = 1
BLAST of Cucsa.397290 vs. TrEMBL
Match: A0A0J8EEP2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214530 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 3.2e-38 Identity = 67/102 (65.69%), Postives = 86/102 (84.31%), Query Frame = 1
BLAST of Cucsa.397290 vs. TrEMBL
Match: A0A067EV35_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024312mg PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 3.2e-38 Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = 1
BLAST of Cucsa.397290 vs. TAIR10
Match: AT2G19580.1 (AT2G19580.1 tetraspanin2) HSP 1 Score: 157.5 bits (397), Expect = 4.4e-39 Identity = 64/103 (62.14%), Postives = 84/103 (81.55%), Query Frame = 1
BLAST of Cucsa.397290 vs. TAIR10
Match: AT5G46700.1 (AT5G46700.1 Tetraspanin family protein) HSP 1 Score: 126.7 bits (317), Expect = 8.3e-30 Identity = 51/102 (50.00%), Postives = 76/102 (74.51%), Query Frame = 1
BLAST of Cucsa.397290 vs. TAIR10
Match: AT5G60220.1 (AT5G60220.1 tetraspanin4) HSP 1 Score: 109.8 bits (273), Expect = 1.0e-24 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 1
BLAST of Cucsa.397290 vs. TAIR10
Match: AT4G28050.1 (AT4G28050.1 tetraspanin7) HSP 1 Score: 105.5 bits (262), Expect = 2.0e-23 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
BLAST of Cucsa.397290 vs. TAIR10
Match: AT2G23810.1 (AT2G23810.1 tetraspanin8) HSP 1 Score: 104.8 bits (260), Expect = 3.4e-23 Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 1
BLAST of Cucsa.397290 vs. NCBI nr
Match: gi|449435846|ref|XP_004135705.1| (PREDICTED: tetraspanin-2-like [Cucumis sativus]) HSP 1 Score: 228.8 bits (582), Expect = 4.4e-57 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of Cucsa.397290 vs. NCBI nr
Match: gi|659099927|ref|XP_008450844.1| (PREDICTED: tetraspanin-2-like [Cucumis melo]) HSP 1 Score: 223.4 bits (568), Expect = 1.8e-55 Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = 1
BLAST of Cucsa.397290 vs. NCBI nr
Match: gi|223546598|gb|EEF48096.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 172.9 bits (437), Expect = 2.9e-40 Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 1
BLAST of Cucsa.397290 vs. NCBI nr
Match: gi|1000977256|ref|XP_015571824.1| (PREDICTED: tetraspanin-2 [Ricinus communis]) HSP 1 Score: 172.9 bits (437), Expect = 2.9e-40 Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 1
BLAST of Cucsa.397290 vs. NCBI nr
Match: gi|1009143260|ref|XP_015889170.1| (PREDICTED: tetraspanin-2 [Ziziphus jujuba]) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39 Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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