Cucsa.395440 (gene) Cucumber (Gy14) v1

NameCucsa.395440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold04100 : 1013041 .. 1013533 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAACATTATAAAATAGTAACACTTCTAAAACTTGAAGGTTGACATTGCGTCAATAATAGTCTAATTTCGAAACCAGATTGTTTTAATGGAAATTTGACAGTTGCAAATGTACGTGGGACTGAAACCGAAAATTTCTTCAACACTATCTATGATCAGTGAATGTTGGGCCTTTTGAACTCATTGGCAGACCCATTAAGAAATAACACGATAGGCTAAATGAATGGGTGGGCTTAACAAAGGTTGGCAGCCAGCACGAACAATGTTATTCACAAATCCAATAATTGTTCTTTATAATAATTATAATATCGATTCACAACTTAGAATGGTGAGAAGGTTTCGAAGTGGATTGATATTTTGGAACTCTCTCTTATATGATTGAAATATACGCAAAACAATACCTTTTTTTTTTTTTAAGAATATAATCGTGTTCAAAATTTTATCATCTTTTGATTGATTGCCATTGAATGAATAAACATTTGATATTTGAGTTT

mRNA sequence

TACAACATTATAAAATAGTAACACTTCTAAAACTTGAAGGTTGACATTGCGTCAATAATAGTCTAATTTCGAAACCAGATTGTTTTAATGGAAATTTGACAGTTGCAAATGTACGTGGGACTGAAACCGAAAATTTCTTCAACACTATCTATGATCAGTGAATGTTGGGCCTTTTGAACTCATTGGCAGACCCATTAAGAAATAACACGATAGGCTAAATGAATGGGTGGGCTTAACAAAGGTTGGCAGCCAGCACGAACAATGTTATTCACAAATCCAATAATTGTTCTTTATAATAATTATAATATCGATTCACAACTTAGAATGGTGAGAAGGTTTCGAAGTGGATTGATATTTTGGAACTCTCTCTTATATGATTGAAATATACGCAAAACAATACCTTTTTTTTTTTTTAAGAATATAATCGTGTTCAAAATTTTATCATCTTTTGATTGATTGCCATTGAATGAATAAACATTTGATATTTGAGTTT

Coding sequence (CDS)

ATGGGTGGGCTTAACAAAGGTTGGCAGCCAGCACGAACAATGTTATTCACAAATCCAATAATTGTTCTTTATAATAATTATAATATCGATTCACAACTTAGAATGGTGAGAAGGTTTCGAAGTGGATTGATATTTTGGAACTCTCTCTTATATGATTGA

Protein sequence

MGGLNKGWQPARTMLFTNPIIVLYNNYNIDSQLRMVRRFRSGLIFWNSLLYD*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.395440.1Cucsa.395440.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 51..52
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.395440Cucurbita pepo (Zucchini)cgycpeB1038
Cucsa.395440Cucurbita pepo (Zucchini)cgycpeB1039
Cucsa.395440Cucurbita pepo (Zucchini)cgycpeB1042
Cucsa.395440Cucurbita pepo (Zucchini)cgycpeB1043
Cucsa.395440Cucurbita pepo (Zucchini)cgycpeB1044
Cucsa.395440Cucurbita pepo (Zucchini)cgycpeB1046
Cucsa.395440Bottle gourd (USVL1VR-Ls)cgylsiB634
Cucsa.395440Bottle gourd (USVL1VR-Ls)cgylsiB635
Cucsa.395440Bottle gourd (USVL1VR-Ls)cgylsiB637
Cucsa.395440Melon (DHL92) v3.6.1cgymedB641
Cucsa.395440Melon (DHL92) v3.6.1cgymedB642
Cucsa.395440Melon (DHL92) v3.6.1cgymedB643
Cucsa.395440Silver-seed gourdcarcgyB0003
Cucsa.395440Silver-seed gourdcarcgyB0225
Cucsa.395440Silver-seed gourdcarcgyB0379
Cucsa.395440Silver-seed gourdcarcgyB0475
Cucsa.395440Silver-seed gourdcarcgyB0527
Cucsa.395440Silver-seed gourdcarcgyB0879
Cucsa.395440Cucumber (Chinese Long) v3cgycucB596
Cucsa.395440Cucumber (Chinese Long) v3cgycucB597
Cucsa.395440Cucumber (Chinese Long) v3cgycucB600
Cucsa.395440Watermelon (97103) v2cgywmbB672
Cucsa.395440Watermelon (97103) v2cgywmbB674
Cucsa.395440Watermelon (97103) v2cgywmbB676
Cucsa.395440Wax gourdcgywgoB784
Cucsa.395440Wax gourdcgywgoB786
Cucsa.395440Wax gourdcgywgoB789
Cucsa.395440Cucumber (Gy14) v1cgycgyB052
Cucsa.395440Cucumber (Gy14) v1cgycgyB119
Cucsa.395440Cucumber (Gy14) v1cgycgyB148
Cucsa.395440Cucurbita maxima (Rimu)cgycmaB1086
Cucsa.395440Cucurbita maxima (Rimu)cgycmaB1088
Cucsa.395440Cucurbita maxima (Rimu)cgycmaB1091
Cucsa.395440Cucurbita maxima (Rimu)cgycmaB1092
Cucsa.395440Cucurbita maxima (Rimu)cgycmaB1094
Cucsa.395440Cucurbita maxima (Rimu)cgycmaB1096
Cucsa.395440Cucurbita moschata (Rifu)cgycmoB1083
Cucsa.395440Cucurbita moschata (Rifu)cgycmoB1086
Cucsa.395440Cucurbita moschata (Rifu)cgycmoB1090
Cucsa.395440Cucurbita moschata (Rifu)cgycmoB1091
Cucsa.395440Cucurbita moschata (Rifu)cgycmoB1093
Cucsa.395440Cucurbita moschata (Rifu)cgycmoB1095
Cucsa.395440Wild cucumber (PI 183967)cgycpiB578
Cucsa.395440Wild cucumber (PI 183967)cgycpiB579
Cucsa.395440Wild cucumber (PI 183967)cgycpiB581
Cucsa.395440Wild cucumber (PI 183967)cgycpiB582
Cucsa.395440Cucumber (Chinese Long) v2cgycuB549
Cucsa.395440Cucumber (Chinese Long) v2cgycuB550
Cucsa.395440Cucumber (Chinese Long) v2cgycuB552
Cucsa.395440Cucumber (Chinese Long) v2cgycuB553
Cucsa.395440Melon (DHL92) v3.5.1cgymeB644
Cucsa.395440Melon (DHL92) v3.5.1cgymeB646
Cucsa.395440Melon (DHL92) v3.5.1cgymeB647
Cucsa.395440Melon (DHL92) v3.5.1cgymeB648
Cucsa.395440Watermelon (Charleston Gray)cgywcgB670
Cucsa.395440Watermelon (Charleston Gray)cgywcgB672
Cucsa.395440Watermelon (Charleston Gray)cgywcgB674
Cucsa.395440Watermelon (97103) v1cgywmB709
Cucsa.395440Watermelon (97103) v1cgywmB706
Cucsa.395440Watermelon (97103) v1cgywmB711