Cucsa.394960 (gene) Cucumber (Gy14) v1

NameCucsa.394960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold04100 : 678422 .. 679554 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTAGTGAAAGGGTTTTTCGATCTCTTGTTTTTATCAGTATTCGTACCTTTTCACCGAGTCATGATTTTCAATCCTTATAATCGCTATTTATTTCTTTTGTTATTTCGATGGATTCTTGTCAAGATCTCACGTATGAAACCATACCCTTTCAGATTAATTTACTACTCATTTTTTTGTTAGATCACCATTTTGCAATTTATGAAATGTATTCTGAATCTATATACAAATTTCAATTTCAATTGTCTGTTTGCATTTCAAAAAGACCACTTCTTTCGCACGTCATTTTCTTCCACATCCTCCACAATGAAGAGATCATTTGAGTATAATTAGACGATCATCATGATATGAGTCTTGATAAAGAGAAAATCCACATATTCGCTTTCGTCCACTAATCCATCTCGTTTCTAAATTCAATGCAACTATAGAAACCCTACGATAGAGACATCGAGCATGAATCAGCACCAGAAGAAAGGAAGGAATACTAGGAAAACACTACGATAAAGGAACGAATTCCAAAAATCAGATGGTTATAAATCAAGAGGTTATGGATGAGAAGTCGAATTTGAAGTGGGAATCTACGAGAGATAAGTCTAGCAAAAAATACTTGGAACAGTAAAAAATAGGTATAACAAAAACATCCTTACGGATGAGTTTTACAAGAGATTATGATACTACAAATGAGATTAGATCCACAACTGTACGAATTCAGATTCAATCTTCTAGGTTTGGTTTCAAAAACTTTTGAATCAAAGCAGCAGAGAGTAAAAGGTTTTGTTAAGACAATAGATTGATAAAATACTTTACTAACACAAAATGTATTTCTTAAAAACAAAGAGGAAAAGGAAAAGGAGATTGAATGAATGTAGCGACTTGTTCGAGGCCATGATCAAAACCAAAAGATTTGCCAGGCACGGAGAATCGCTAAACGTTAGTATTGCCAACCTTCAATGCAATTCACGCCATTAAATCAAAGACGCCCTTGCTCTGCAAATTGGCATTCACTCCATTTACCTTCTTCCATTCAGTAAATGAAATACGAAGGAATTGAACATACAAATAACGAAAGAAGAAACCCTAACAAAAACACTAAAATGTAGAGATGGGGAGTTCAGTAGGCGAAGAGTACGAACA

mRNA sequence

TTTTAGTGAAAGGGTTTTTCGATCTCTTGTTTTTATCAGTATTCGTACCTTTTCACCGAGTCATGATTTTCAATCCTTATAATCGCTATTTATTTCTTTTGTTATTTCGATGGATTCTTGTCAAGATCTCACGTATGAAACCATACCCTTTCAGATTAATTTACTACTCATTTTTTTGTTAGATCACCATTTTGCAATTTATGAAATGTATTCTGAATCTATATACAAATTTCAATTTCAATTGTCTGTTTGCATTTCAAAAAGACCACTTCTTTCGCACGTCATTTTCTTCCACATCCTCCACAATGAAGAGATCATTTGAGTATAATTAGACGATCATCATGATATGAGTCTTGATAAAGAGAAAATCCACATATTCGCTTTCGTCCACTAATCCATCTCGTTTCTAAATTCAATGCAACTATAGAAACCCTACGATAGAGACATCGAGCATGAATCAGCACCAGAAGAAAGGAAGGAATACTAGGAAAACACTACGATAAAGGAACGAATTCCAAAAATCAGATGGTTATAAATCAAGAGGTTATGGATGAGAAGTCGAATTTGAAGTGGGAATCTACGAGAGATAAGTCTAGCAAAAAATACTTGGAACAGTAAAAAATAGGTATAACAAAAACATCCTTACGGATGAGTTTTACAAGAGATTATGATACTACAAATGAGATTAGATCCACAACTGTACGAATTCAGATTCAATCTTCTAGGTTTGGTTTCAAAAACTTTTGAATCAAAGCAGCAGAGAGTAAAAGGTTTTGTTAAGACAATAGATTGATAAAATACTTTACTAACACAAAATGTATTTCTTAAAAACAAAGAGGAAAAGGAAAAGGAGATTGAATGAATGTAGCGACTTGTTCGAGGCCATGATCAAAACCAAAAGATTTGCCAGGCACGGAGAATCGCTAAACGTTAGTATTGCCAACCTTCAATGCAATTCACGCCATTAAATCAAAGACGCCCTTGCTCTGCAAATTGGCATTCACTCCATTTACCTTCTTCCATTCAGTAAATGAAATACGAAGGAATTGAACATACAAATAACGAAAGAAGAAACCCTAACAAAAACACTAAAATGTAGAGATGGGGAGTTCAGTAGGCGAAGAGTACGAACA

Coding sequence (CDS)

ATGGATTCTTGTCAAGATCTCACGTATGAAACCATACCCTTTCAGATTAATTTACTACTCATTTTTTTGTTAGATCACCATTTTGCAATTTATGAAATGTATTCTGAATCTATATACAAATTTCAATTTCAATTGTCTGTTTGCATTTCAAAAAGACCACTTCTTTCGCACGTCATTTTCTTCCACATCCTCCACAATGAAGAGATCATTTGA

Protein sequence

MDSCQDLTYETIPFQINLLLIFLLDHHFAIYEMYSESIYKFQFQLSVCISKRPLLSHVIFFHILHNEEII*
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.394960.1Cucsa.394960.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.394960Cucurbita pepo (Zucchini)cgycpeB1037
Cucsa.394960Cucurbita pepo (Zucchini)cgycpeB1039
Cucsa.394960Cucurbita pepo (Zucchini)cgycpeB1041
Cucsa.394960Cucurbita pepo (Zucchini)cgycpeB1045
Cucsa.394960Bottle gourd (USVL1VR-Ls)cgylsiB636
Cucsa.394960Bottle gourd (USVL1VR-Ls)cgylsiB637
Cucsa.394960Melon (DHL92) v3.6.1cgymedB637
Cucsa.394960Melon (DHL92) v3.6.1cgymedB638
Cucsa.394960Melon (DHL92) v3.6.1cgymedB641
Cucsa.394960Silver-seed gourdcarcgyB0225
Cucsa.394960Silver-seed gourdcarcgyB0700
Cucsa.394960Silver-seed gourdcarcgyB0773
Cucsa.394960Cucumber (Chinese Long) v3cgycucB596
Cucsa.394960Cucumber (Chinese Long) v3cgycucB599
Cucsa.394960Watermelon (97103) v2cgywmbB676
Cucsa.394960Wax gourdcgywgoB784
Cucsa.394960Wax gourdcgywgoB788
Cucsa.394960Cucumber (Gy14) v1cgycgyB024
Cucsa.394960Cucurbita maxima (Rimu)cgycmaB1087
Cucsa.394960Cucurbita maxima (Rimu)cgycmaB1090
Cucsa.394960Cucurbita maxima (Rimu)cgycmaB1093
Cucsa.394960Cucurbita maxima (Rimu)cgycmaB1094
Cucsa.394960Cucurbita moschata (Rifu)cgycmoB1085
Cucsa.394960Cucurbita moschata (Rifu)cgycmoB1089
Cucsa.394960Cucurbita moschata (Rifu)cgycmoB1092
Cucsa.394960Cucurbita moschata (Rifu)cgycmoB1093
Cucsa.394960Wild cucumber (PI 183967)cgycpiB578
Cucsa.394960Wild cucumber (PI 183967)cgycpiB580
Cucsa.394960Cucumber (Chinese Long) v2cgycuB549
Cucsa.394960Cucumber (Chinese Long) v2cgycuB551
Cucsa.394960Melon (DHL92) v3.5.1cgymeB643
Cucsa.394960Melon (DHL92) v3.5.1cgymeB646
Cucsa.394960Watermelon (Charleston Gray)cgywcgB674
Cucsa.394960Watermelon (97103) v1cgywmB706