Cucsa.386830 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.386830
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionEpidermal patterning factor-like protein
Locationscaffold03918 : 355858 .. 356848 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTACtcctcctcctccaccaccgccgccgcactcctctatccctcctCCTCCTCCTCCTCCTCACTtCCTCCATtGCCGCCcGCCccACTCCcAtCGGTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcTTTCTTtCTTTCTTTCTTtCTTTCTTTCTTTTTATTCTCTCTCAAACCACCCATCTCTTAATTCCTCTATTTATCAACCCATTTCTCGGTTTGTTTTAACAAAAACAGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGAAATTTTAGCAAA

mRNA sequence

ATGGCcctactcctcctcctccaccaccgccgccgcactcctctatccctcctcctcctcctcctcctcACTTCCTCCATTGCCGCCCGCCCCACTCCCATCGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGAAATTTTAGCAAA

Coding sequence (CDS)

ATGGCCCTACtcctcctcctccaccaccgccgccgcactcctctatccctcctCCTCCTCCTCCTCCTCACTtCCTCCATtGCCGCCcGCCccACTCCcAtCGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGA

Protein sequence

MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP*
Homology
[Close]
BLAST of Cucsa.386830 vs. Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-25
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1 

Query: 53  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           + +R  GPGSSPPTCRSKCG C+PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 52  SNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]
BLAST of Cucsa.386830 vs. Swiss-Prot
Match: EPFL5_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-24
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 1 

Query: 20  LLLLTSSIAA---RPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRP 79
           LL  +SS AA   RP+    + + ++   G     + ++RL GPGS PP CR KCG C P
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEP 73

Query: 80  CTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           C AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 74  CKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]
BLAST of Cucsa.386830 vs. Swiss-Prot
Match: EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-19
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 1 

Query: 54  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]
BLAST of Cucsa.386830 vs. Swiss-Prot
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.9e-06
Identity = 32/120 (26.67%), Postives = 49/120 (40.83%), Query Frame = 1 

Query: 15  LSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSC 74
           L L+L+LL+T  +++   PI     P++     K            GS+PP+C ++C +C
Sbjct: 12  LPLILILLITPQVSSFLQPIQPPISPQVALIEDKARL---------GSTPPSCHNRCNNC 71

Query: 75  RPCTAVHVP------------------IQPGLSLPL------EYYPEAWRCKCGNTLYMP 111
            PC A+ VP                  ++P  SL         Y P  W+C C    Y P
Sbjct: 72  HPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of Cucsa.386830 vs. TrEMBL
Match: A0A0A0LKT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G222070 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-58
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1 

Query: 1   MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 60
           MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP
Sbjct: 1   MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 60

Query: 61  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 61  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 110

[Close]
BLAST of Cucsa.386830 vs. TrEMBL
Match: A0A0D2RNN9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G168700 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-26
Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 1 

Query: 8   HHRRRTPLSLLLLLLLTSSIAARPTPIDQEAE--PKLLPPGTKEPFLTRRRLSGPGSSPP 67
           HHR+ T  +L  LL  +    +R     QE E   K    G  + F+ ++RLSGPGSSPP
Sbjct: 6   HHRQHTAAALAFLLFASVITLSRFGSGFQEREGSKKRSGSGELDRFIAQKRLSGPGSSPP 65

Query: 68  TCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           +CRSKCG+C PC  VHVPIQPG S+PLEYYPEAWRCKCGN L+MP
Sbjct: 66  SCRSKCGNCSPCKPVHVPIQPGFSMPLEYYPEAWRCKCGNKLFMP 110

[Close]
BLAST of Cucsa.386830 vs. TrEMBL
Match: A0A067L843_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02227 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-26
Identity = 65/113 (57.52%), Postives = 76/113 (67.26%), Query Frame = 1 

Query: 3   LLLLLHHRRRTPLSLLLLLLLTSSIAARPTPID---QEAEPKLLPPGTK--EPFLTRRRL 62
           + +LL HR  T L+    LL  SS A   + +    Q+ E      G K  +  LT++RL
Sbjct: 1   MAVLLRHRLSTVLTAFTFLLFFSSSATTLSVLGNGFQKREEGEKGRGLKAFDRVLTQKRL 60

Query: 63  SGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           SGPGSSPPTCRSKCG C PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 61  SGPGSSPPTCRSKCGRCLPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 113

[Close]
BLAST of Cucsa.386830 vs. TrEMBL
Match: B9RTK3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0911080 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.6e-26
Identity = 63/118 (53.39%), Postives = 75/118 (63.56%), Query Frame = 1 

Query: 1   MALLLLLHHRRR-TPLSLLLLLLLTSSIAARPTPID-------QEAEPKLLPPGTKEPFL 60
           MA+L   HH    + L+    LL  SS A   + +        +E E   L     + FL
Sbjct: 1   MAVLRYRHHSPHLSTLTAFTFLLFFSSSATTLSHLGNSGFQEKEEGEGSRLRTTLSDRFL 60

Query: 61  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           +++RL GPGSSPPTCRSKCG C PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 61  SQKRLGGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 118

[Close]
BLAST of Cucsa.386830 vs. TrEMBL
Match: A0A0B0N8Z7_GOSAR (Epidermal patterning factor-like protein 4 OS=Gossypium arboreum GN=F383_34209 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.6e-26
Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 1 

Query: 8   HHRRRTPLSLLLLLLLTSSIAARPTPIDQEAE--PKLLPPGTKEPFLTRRRLSGPGSSPP 67
           HHR+ T  +L  LL  +    +R     QE E   K    G  + F+ ++RLSGPGSSPP
Sbjct: 6   HHRQHTAAALAFLLFASVITLSRFGSGFQEREGSKKRSGSGVLDRFIAQKRLSGPGSSPP 65

Query: 68  TCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYM 110
           +CRSKCG+C PC  VHVPIQPG S+PLEYYPEAWRCKCGN L+M
Sbjct: 66  SCRSKCGNCSPCKPVHVPIQPGFSMPLEYYPEAWRCKCGNKLFM 109

[Close]
BLAST of Cucsa.386830 vs. TAIR10
Match: AT4G14723.1 (AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1))

HSP 1 Score: 114.8 bits (286), Expect = 3.5e-26
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1 

Query: 53  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           + +R  GPGSSPPTCRSKCG C+PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 52  SNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]
BLAST of Cucsa.386830 vs. TAIR10
Match: AT3G22820.1 (AT3G22820.1 allergen-related)

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-25
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 1 

Query: 20  LLLLTSSIAA---RPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRP 79
           LL  +SS AA   RP+    + + ++   G     + ++RL GPGS PP CR KCG C P
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEP 73

Query: 80  CTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           C AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 74  CKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]
BLAST of Cucsa.386830 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related)

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-20
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 1 

Query: 54  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]
BLAST of Cucsa.386830 vs. TAIR10
Match: AT5G10310.1 (AT5G10310.1 unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 2.8e-07
Identity = 32/120 (26.67%), Postives = 49/120 (40.83%), Query Frame = 1 

Query: 15  LSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSC 74
           L L+L+LL+T  +++   PI     P++     K            GS+PP+C ++C +C
Sbjct: 12  LPLILILLITPQVSSFLQPIQPPISPQVALIEDKARL---------GSTPPSCHNRCNNC 71

Query: 75  RPCTAVHVP------------------IQPGLSLPL------EYYPEAWRCKCGNTLYMP 111
            PC A+ VP                  ++P  SL         Y P  W+C C    Y P
Sbjct: 72  HPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of Cucsa.386830 vs. TAIR10
Match: AT4G37810.1 (AT4G37810.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 8.0e-07
Identity = 40/122 (32.79%), Postives = 52/122 (42.62%), Query Frame = 1 

Query: 17  LLLLLLLTS---SIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTC-RSKCG 76
           LL+LL+L S   S+ A   P     E      G ++  +  R L G  S PP C R +C 
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVE--FTKSGDQDVKMMMRGLIG--SRPPRCERVRCR 70

Query: 77  SCRPCTAVHVPIQPGLSL--PL----------------------EYYPEAWRCKCGNTLY 111
           SC  C A+ VP  P   L  PL                       Y P +W+CKCGN++Y
Sbjct: 71  SCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIY 128

[Close]
BLAST of Cucsa.386830 vs. NCBI nr
Match: gi|449455304|ref|XP_004145393.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1 

Query: 1   MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 60
           MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP
Sbjct: 1   MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 60

Query: 61  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 61  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 110

[Close]
BLAST of Cucsa.386830 vs. NCBI nr
Match: gi|659096840|ref|XP_008449315.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 2.6e-47
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 1 

Query: 4   LLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSS 63
           +LLLHH RRT L+L LLLLLTSSIAARPTPID+EAE KL P GT+E  LTRRRL+GPGSS
Sbjct: 3   VLLLHHCRRTHLTLFLLLLLTSSIAARPTPIDEEAEAKL-PAGTRERVLTRRRLTGPGSS 62

Query: 64  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 63  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]
BLAST of Cucsa.386830 vs. NCBI nr
Match: gi|802581409|ref|XP_012069700.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas])

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26
Identity = 65/113 (57.52%), Postives = 76/113 (67.26%), Query Frame = 1 

Query: 3   LLLLLHHRRRTPLSLLLLLLLTSSIAARPTPID---QEAEPKLLPPGTK--EPFLTRRRL 62
           + +LL HR  T L+    LL  SS A   + +    Q+ E      G K  +  LT++RL
Sbjct: 1   MAVLLRHRLSTVLTAFTFLLFFSSSATTLSVLGNGFQKREEGEKGRGLKAFDRVLTQKRL 60

Query: 63  SGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           SGPGSSPPTCRSKCG C PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 61  SGPGSSPPTCRSKCGRCLPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 113

[Close]
BLAST of Cucsa.386830 vs. NCBI nr
Match: gi|823250485|ref|XP_012457829.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Gossypium raimondii])

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26
Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 1 

Query: 8   HHRRRTPLSLLLLLLLTSSIAARPTPIDQEAE--PKLLPPGTKEPFLTRRRLSGPGSSPP 67
           HHR+ T  +L  LL  +    +R     QE E   K    G  + F+ ++RLSGPGSSPP
Sbjct: 6   HHRQHTAAALAFLLFASVITLSRFGSGFQEREGSKKRSGSGELDRFIAQKRLSGPGSSPP 65

Query: 68  TCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 111
           +CRSKCG+C PC  VHVPIQPG S+PLEYYPEAWRCKCGN L+MP
Sbjct: 66  SCRSKCGNCSPCKPVHVPIQPGFSMPLEYYPEAWRCKCGNKLFMP 110

[Close]
BLAST of Cucsa.386830 vs. NCBI nr
Match: gi|720000891|ref|XP_010256175.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Nelumbo nucifera])

HSP 1 Score: 124.8 bits (312), Expect = 9.5e-26
Identity = 63/121 (52.07%), Postives = 75/121 (61.98%), Query Frame = 1 

Query: 7   LHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLP-PGTKEP--------------- 66
           LHH  R   ++ L LL  +S +A      ++    L+   G K+P               
Sbjct: 9   LHHHHRLSAAVALALLFIASASATVLSSTRQLGSGLVGVSGVKKPEREEAKKGGGLEVLE 68

Query: 67  -FLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYM 111
             L+RRRL+GPGSSPPTCRSKCG C PC AVHVPIQPG S+PLEYYPEAWRCKCGN L+M
Sbjct: 69  RLLSRRRLAGPGSSPPTCRSKCGRCSPCKAVHVPIQPGRSIPLEYYPEAWRCKCGNKLFM 128

The following BLAST results are available for this feature:
BLAST of Cucsa.386830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EPFL4_ARATH6.2e-2579.31EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1... [more]
EPFL5_ARATH1.8e-2456.38EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana GN=EPFL5 PE=1... [more]
EPFL6_ARATH3.9e-1970.18EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1... [more]
EPFL1_ARATH4.9e-0626.67EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1... [more]
BLAST of Cucsa.386830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKT0_CUCSA1.0e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G222070 PE=4 SV=1[more]
A0A0D2RNN9_GOSRA1.7e-2657.14Uncharacterized protein OS=Gossypium raimondii GN=B456_011G168700 PE=4 SV=1[more]
A0A067L843_JATCU1.7e-2657.52Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02227 PE=4 SV=1[more]
B9RTK3_RICCO8.6e-2653.39Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0911080 PE=4 SV=1[more]
A0A0B0N8Z7_GOSAR8.6e-2656.73Epidermal patterning factor-like protein 4 OS=Gossypium arboreum GN=F383_34209 P... [more]
BLAST of Cucsa.386830 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14723.13.5e-2679.31 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:A... [more]
AT3G22820.11.0e-2556.38 allergen-related[more]
AT2G30370.12.2e-2070.18 allergen-related[more]
AT5G10310.12.8e-0726.67 unknown protein[more]
AT4G37810.18.0e-0732.79 unknown protein[more]
BLAST of Cucsa.386830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449455304|ref|XP_004145393.1|1.5e-58100.00PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucumis sativus][more]
gi|659096840|ref|XP_008449315.1|2.6e-4787.85PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo][more]
gi|802581409|ref|XP_012069700.1|2.5e-2657.52PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas][more]
gi|823250485|ref|XP_012457829.1|2.5e-2657.14PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Gossypium raimondii][more]
gi|720000891|ref|XP_010256175.1|9.5e-2652.07PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010374 stomatal complex development
biological_process GO:0010052 guard cell differentiation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.386830.1Cucsa.386830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33109FAMILY NOT NAMEDcoord: 54..110
score: 4.4
NoneNo IPR availablePANTHERPTHR33109:SF4EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 5coord: 54..110
score: 4.4
NoneNo IPR availablePFAMPF17181EPFcoord: 60..110
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.386830Cla007530Watermelon (97103) v1cgywmB701
Cucsa.386830Cla021594Watermelon (97103) v1cgywmB700
Cucsa.386830Csa3G146310Cucumber (Chinese Long) v2cgycuB544
Cucsa.386830Csa2G222070Cucumber (Chinese Long) v2cgycuB543
Cucsa.386830MELO3C014284Melon (DHL92) v3.5.1cgymeB634
Cucsa.386830ClCG05G004890Watermelon (Charleston Gray)cgywcgB664
Cucsa.386830ClCG06G006480Watermelon (Charleston Gray)cgywcgB665
Cucsa.386830CSPI02G10970Wild cucumber (PI 183967)cgycpiB572
Cucsa.386830CSPI03G12800Wild cucumber (PI 183967)cgycpiB573
Cucsa.386830CmaCh17G002080Cucurbita maxima (Rimu)cgycmaB1074
Cucsa.386830CmaCh06G013740Cucurbita maxima (Rimu)cgycmaB1075
Cucsa.386830CmaCh08G011260Cucurbita maxima (Rimu)cgycmaB1076
Cucsa.386830CmoCh06G013860Cucurbita moschata (Rifu)cgycmoB1074
Cucsa.386830CmoCh08G010990Cucurbita moschata (Rifu)cgycmoB1075
Cucsa.386830Lsi09G012950Bottle gourd (USVL1VR-Ls)cgylsiB628
Cucsa.386830Lsi05G016350Bottle gourd (USVL1VR-Ls)cgylsiB629
Cucsa.386830Cp4.1LG17g01710Cucurbita pepo (Zucchini)cgycpeB1024
Cucsa.386830Cp4.1LG12g01730Cucurbita pepo (Zucchini)cgycpeB1023
Cucsa.386830Cp4.1LG08g03850Cucurbita pepo (Zucchini)cgycpeB1026
Cucsa.386830MELO3C014284.2Melon (DHL92) v3.6.1cgymedB629
Cucsa.386830CsaV3_3G012930Cucumber (Chinese Long) v3cgycucB589
Cucsa.386830CsaV3_2G013420Cucumber (Chinese Long) v3cgycucB588
Cucsa.386830Cla97C05G085980Watermelon (97103) v2cgywmbB667
Cucsa.386830Cla97C06G116000Watermelon (97103) v2cgywmbB668
Cucsa.386830Bhi01G000554Wax gourdcgywgoB775
Cucsa.386830Bhi12G001490Wax gourdcgywgoB773
Cucsa.386830Carg10047Silver-seed gourdcarcgyB0274
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.386830Cucsa.254600Cucumber (Gy14) v1cgycgyB134
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.386830Silver-seed gourdcarcgyB0385
Cucsa.386830Silver-seed gourdcarcgyB1081
Cucsa.386830Watermelon (97103) v2cgywmbB669
Cucsa.386830Wax gourdcgywgoB776
Cucsa.386830Cucurbita maxima (Rimu)cgycmaB1073
Cucsa.386830Cucurbita moschata (Rifu)cgycmoB1072
Cucsa.386830Cucurbita moschata (Rifu)cgycmoB1073
Cucsa.386830Melon (DHL92) v3.5.1cgymeB635
Cucsa.386830Watermelon (Charleston Gray)cgywcgB666
Cucsa.386830Watermelon (97103) v1cgywmB699
Cucsa.386830Cucurbita pepo (Zucchini)cgycpeB1025
Cucsa.386830Bottle gourd (USVL1VR-Ls)cgylsiB630
Cucsa.386830Melon (DHL92) v3.6.1cgymedB630