Cucsa.383200 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACACCATTCCAGTGAAGCTGATGAGGTGAAGAAACGAGCATTGACGGGTCTTCAACGTCTGCATGATATGGTGGCCATTGAACGTAGGGCTACAACGAGGGATGACCTAATTGTGAGGAAGAAGTGGTCTGAAGTAAGCGATGTTGAACCGACCATCGTGAACCAAGGATTAGGTGAGAAGCGTTCCGTTGATCGTGGTCCAAAACAAGTAACCAATGGGCTGGATCGAAAGAAGGCCGAGAAGGGTTTAATTGGGCCGCTAGTGGATGGGCCTGAATTGGAGATTGACCCAAAAAACTCAAAGATTGGGCCAACTCTTGAATTGAAGAATGGACTGGATAAAGAGGATGGGCTGAATGATGGGCCGAATAAAAGCAATATAATTGAGTCGGTTGTAGTTGTTGAAGATTGTGGGCCGACTGTAGCTACTGAAATGATTGAAAaGAAAAACAGTGGTGAAGCCCAGTCTAAAGGAGAGCCGAGAGCATTTGGTAAATCTTCATGGGCTTCATTATTTGGGTCTTCAAGTAGGAATCCTTTGATATATACTCCTCCTTCTACCGTAGGGGAGAAAATTGTGGTGATCCCTACTAAAGAAGTCATTGAATAAGGAGTTAGGGTGTGGGAGAACTCCCTAGTAGGGCAATTAAATGACGTAAAATTGTCGTATCAAGTTATTTATCGACTAATAGAGAAGATTTGGGGAAGAGTTGAAATGCCTACAATCACTCTTATGGAGAATGGCCTCATTTTTTCCAATTTAAAAGTCTGAAATCGATAGACTGTATCTTGTCCCGTGGTCTGTGGCACCTTAGAGGAAAACTGATGCTCCTTCGAAAATGGATGCCAGGTATTGTCCCTGAAACTTTTGTTTTTGATATTGTTCCTGTTTGGATTAAATTAGGGCAAATCCCAGTGGAGTTATGGACGGATGTCGGTTTGGTTATTGTCGCGAGTGCAATAGTAAAACCTCTATCCTTAGACCTTGCTACCAAAGAAAGGCGTCAGCTTTCTTATGCCCGTATTTGTGTGGAAATGAATGTAAACAACCATATGTCTGCCGATATAATGGTTAATCTTAGAGGAGAGGAGTTCATAGTGAATG atgaaacaccattccagtgaagctgatgaggtgaagaaacgagcattgacgggtcttcaacgtctgcatgatatggtggccattgaacgtagggctacaacgagggatgacctaattgtgaggaagaagtggtctgaagtaagcgatgttgaaccgaccatcgtgaaccaaggattaggtgagaagcgTTCCGTTGATCGTGGTCCAAAACAAGTAACCAATGGGCTGGATCGAAAGAAGGCCGAGAAGGGTTTAATTGGGCCGCTAGTGGATGGGCCTGAATTGGAGATTGACCCAAAAAACTCAAAGATTGGGCCAACTCTTGAATTGAAGAATGGACTGGATAAAGAGGATGGGCTGAATGATGGGCCGAATAAAAGCAATATAATTGAGTCGGTTGTAGTTGTTGAAGATTGTGGGCCGACTGTAGCTACTGAAATGATTGAAAAGAAAAACAGTGGTGAAGCCCAGTCTAAAGGAGAGCCGAGAGCATTTGaatggcctcattttttccaatttaaaagtctgaaatcgatagactgtatcttgtcccgtggtctgtggcaccttagaggaaaactgatgctccttcgaaaatggatgccaggtattgtccctgaaacttttgtttttgatattgttcctgtttggattaaattagggcaaatcccagtggagttatggacggatgtcggtttggttattgtcgcgagtgcaatagtaaaacctctatccttagaccttgctaccaaagaaaggcgtcagctttcttatgcccgtatttgtgtggaaatgaatgtaaacaaccatatgtctgccgatataatggttaatcttagaggagaggagttcatagtgaatg ATGAAACACCATTCCAGTGAAGCTGATGAGGTGAAGAAACGAGCATTGACGGGTCTTCAACGTCTGCATGATATGGTGGCCATTGAACGTAGGGCTACAACGAGGGATGACCTAATTGTGAGGAAGAAGTGGTCTGAAGTAAGCGATGTTGAACCGACCATCGTGAACCAAGGATTAGGTGAGAAGCGTTCCGTTGATCGTGGTCCAAAACAAGTAACCAATGGGCTGGATCGAAAGAAGGCCGAGAAGGGTTTAATTGGGCCGCTAGTGGATGGGCCTGAATTGGAGATTGACCCAAAAAACTCAAAGATTGGGCCAACTCTTGAATTGAAGAATGGACTGGATAAAGAGGATGGGCTGAATGATGGGCCGAATAAAAGCAATATAATTGAGTCGGTTGTAGTTGTTGAAGATTGTGGGCCGACTGTAGCTACTGAAATGATTGAAAaGAAAAACAGTGGTGAAGCCCAGTCTAAAGGAGAGCCGAGAGCATTTGAATGGCCTCATTTTTTCCAATTTAAAAGTCTGAAATCGATAGACTGTATCTTGTCCCGTGGTCTGTGGCACCTTAGAGGAAAACTGATGCTCCTTCGAAAATGGATGCCAGGTATTGTCCCTGAAACTTTTGTTTTTGATATTGTTCCTGTTTGGATTAAATTAGGGCAAATCCCAGTGGAGTTATGGACGGATGTCGGTTTGGTTATTGTCGCGAGTGCAATAGTAAAACCTCTATCCTTAGACCTTGCTACCAAAGAAAGGCGTCAGCTTTCTTATGCCCGTATTTGTGTGGAAATGAATGTAAACAACCATATGTCTGCCGATATAATGGTTAATCTTAGAGGAGAGGAGTTCATAGTGAATG MKHHSSEADEVKKRALTGLQRLHDMVAIERRATTRDDLIVRKKWSEVSDVEPTIVNQGLGEKRSVDRGPKQVTNGLDRKKAEKGLIGPLVDGPELEIDPKNSKIGPTLELKNGLDKEDGLNDGPNKSNIIESVVVVEDCGPTVATEMIEKKNSGEAQSKGEPRAFEWPHFFQFKSLKSIDCILSRGLWHLRGKLMLLRKWMPGIVPETFVFDIVPVWIKLGQIPVELWTDVGLVIVASAIVKPLSLDLATKERRQLSYARICVEMNVNNHMSADIMVNLRGEEFIVNX
BLAST of Cucsa.383200 vs. TrEMBL
Match: U5G7R8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s08675g PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1
BLAST of Cucsa.383200 vs. TrEMBL
Match: A0A0R0H500_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G136200 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.9e-12 Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = 1
BLAST of Cucsa.383200 vs. TrEMBL
Match: U5GBD7_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0006s16970g PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1
BLAST of Cucsa.383200 vs. TrEMBL
Match: O23411_ARATH (Putative uncharacterized protein AT4g15600 OS=Arabidopsis thaliana GN=dl3840c PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11 Identity = 53/214 (24.77%), Postives = 103/214 (48.13%), Query Frame = 1
BLAST of Cucsa.383200 vs. TrEMBL
Match: A0A0B2QB65_GLYSO (Uncharacterized protein (Fragment) OS=Glycine soja GN=glysoja_010707 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = 1
BLAST of Cucsa.383200 vs. TAIR10
Match: AT2G01050.1 (AT2G01050.1 zinc ion binding;nucleic acid binding) HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10 Identity = 47/211 (22.27%), Postives = 94/211 (44.55%), Query Frame = 1
BLAST of Cucsa.383200 vs. NCBI nr
Match: gi|778681441|ref|XP_011651511.1| (PREDICTED: uncharacterized protein LOC105434909 [Cucumis sativus]) HSP 1 Score: 169.5 bits (428), Expect = 8.7e-39 Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 1
BLAST of Cucsa.383200 vs. NCBI nr
Match: gi|659126448|ref|XP_008463187.1| (PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]) HSP 1 Score: 162.9 bits (411), Expect = 8.2e-37 Identity = 76/117 (64.96%), Postives = 97/117 (82.91%), Query Frame = 1
BLAST of Cucsa.383200 vs. NCBI nr
Match: gi|659121150|ref|XP_008460523.1| (PREDICTED: uncharacterized protein LOC103499323 isoform X1 [Cucumis melo]) HSP 1 Score: 162.9 bits (411), Expect = 8.2e-37 Identity = 76/117 (64.96%), Postives = 96/117 (82.05%), Query Frame = 1
BLAST of Cucsa.383200 vs. NCBI nr
Match: gi|659121150|ref|XP_008460523.1| (PREDICTED: uncharacterized protein LOC103499323 isoform X1 [Cucumis melo]) HSP 1 Score: 37.0 bits (84), Expect = 6.8e+01 Identity = 33/115 (28.70%), Postives = 51/115 (44.35%), Query Frame = 1
HSP 2 Score: 108.2 bits (269), Expect = 2.4e-20 Identity = 53/83 (63.86%), Postives = 69/83 (83.13%), Query Frame = 1
BLAST of Cucsa.383200 vs. NCBI nr
Match: gi|747107826|ref|XP_011102225.1| (PREDICTED: uncharacterized protein LOC105180248 [Sesamum indicum]) HSP 1 Score: 100.1 bits (248), Expect = 6.5e-18 Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |