Cucsa.379770 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.379770
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationscaffold03837 : 180289 .. 181985 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACCCTTTACCAAGTTTTTCTTTACCTAAAGTCTTTCATGAATCTTCAGTTGATCATTTGAATCCCTCAAGCAGTATACCCACACTTTCCTCTTTACCAAACATGAACAATGACAACACCTTAGAAGTCATAGCCCAATCCACAAACAGTCCAACTTCATCAACCCAACAACCTGAACAACATATTTCTGAAACTTCCAGCAATCATACAGTTAGAAGATCCACTCAAATCAACAAACAACCTTCTTATCTCTCGAAGCTTACCATTGCGGTCTTCTTACGTCACAACCTTATCACTCAAGCTCCACAAAATACCCTCTAAACCAATACATCTCATACCAAGCTCTCTCTCATTCCTTAAAACATTCAATACTCCAAGCTTCCTACCTTACATGAACCAAACTTTTACCATGAGGTTGTCATACATGATGATTGGAGAAGGGTCATGGAAGCTGAACTAAAAGCTATGGAGGTTAATAAAACATGGAGTATAGTTCCTCTACCACCCGACAAGAATATTGTAGGATGTTGATGGATATACAAAATTAAACATAAAGTTGATGGCTCTGTTGAGAGGTATAAGGAGATGCTCGTTGCAAAATGATATACACAACAAGAAGGCCTTGACTATTTTGAGATTTTAACACCTGTGGCTAAAATGGTAACTGTCAAAACCTTATTGACCATAGCAGTATCAAAAGATTGGCATCTACTTCAATTGGATGTGAATAATGCATTTCTACATGAAAACTTGTTTGAAGAAGTATACATGGATTTGCCTTTTGGTTACAAACTCAACCTCATAAGTCTATATATGGCTTAAAACAGGTTTTTTGTCAGTGACATGTCAAGTTCTCTCAATTCCTTATTTCAATAGGCTTTCAACGGTCCAAGGTTGATTATTCCCTCATTGTAAAATGCCAAGGTACTAGTTTTATAGCTCTACTTGTCTATGTTGATCTTATTCAAAGCCCACAAAATATGCTCAACTACAAGTTTCTGCTTAAAGACTTGGGGTCTCTCAAATTCTTCCTTGGTCTTGAATTAACTCGTTCCTCGGCTGGTATCCTATTGTCATAAAGACATTGTGCCCTGCGCTTGCAAGACGAAGCTAGTTTACTTGGTGCTAGACCAACGTCTATACCTATGGATCTAAAAACCAAATTAAAAGCTTTTGACAAAGACCTTCTTCAAGACCCAACTGCCTATCAGACACTAGTTGGAAAACTTCTGTACTTGACCATTTCAAGGCTTGATATCTCATTTGTTGTTTACAAGCTCAACCAATTCATGGCAAAACCTGACAAAACTCACATGAATGTAGCTAATCATCTCTTGAGATACATCAATGGTTCCCCGGGCCAAGGAATTTTTCTATCTAAAACAAATGATCTAATCTTGAAAGCATTTGCAAATGCTGATTGGGGATCATGCCCTGATACCCGCCGTTCAATCATCGAGTTTCATGTTTTCCTTGGTTAGTCCCCTATAGCATGGAAGTCAAAGAAACAACAAACAATTTCACGGTCATCAGCTGAAGCAGAGTACCGAGCATTGGCCACTATTTCTTGTGAAGTTATCTGGCTCAAAAGTCTCCTCAAAGAGTTGCAGATTGCAATAAACGCACCTACTGTGGTGTTTTGTGATAATCAAGTTACAACTTACATAGCTAATAACTCCATTGTTTCATGA

mRNA sequence

atggaagaccctttaccaagtttttctttacctaaagtctttcatgaatcttcagttgatcatttgaatccctcaagcagtatacccacactttcctctttaccaaacatgaacaatgacaacaccttagaagtcatagcccaatccacaaacagtccaacttcatcaacccaacaacctgaacaacatatttctgaaacttccagcaatcatacagttagaagatccactcaaatcaacaaacaaccttcttatctctcgaagcttaccattgcgcttcctaccttacatgaaccaaacttttaccatgaggttgtcatacaTGAtgattggagaagggtcatggaagctgaactaaaagctatggaggttaataaaacatggagtatagttcctctaccacccgacaagaatattgtaggatgccttgactattttgagattttaacacctgtggctaaaatggtaactgtcaaaaccttattgaccatagcagtatcaaaagattggcatctacttcaattggatgtgaataatgcatttctacatgaaaacttgtttgaagaagtatacatggatttgccttttgacgaagctagtttacttggtgctagaccaacgtctatacctatggatctaaaaaccaaattaaaagcttttgacaaagaccttcttcaagacccaactgcctatcagacactagttggaaaacttctgtacttgaccatttcaaggcttgatatctcatttgttgtttacaagctcaaccaattcatggcaaaacctgacaaaactcacatgaatgtagctaatcatctcttgagatacatcaatggttccccgggccaaggaatttttctatctaaaacaaatgatctaatcttgaaagcatttgcaaatgctgattggggatcatgccctgatacccgccgttcaatcatcgagtttcattcaaagaaacaacaaacaatttcacggtcatcagctgaagcagagtaccgagcattggccactatttcttgtgaagttatctggctcaaaagtctcctcaaagagttgcagattgcaataaacgcacctactgtggtgttttgtgataatcaagttacaacttacatagctaataactccattgtttcatga

Coding sequence (CDS)

ATGGAAGACCCTTTACCAAGTTTTTCTTTACCTAAAGTCTTTCATGAATCTTCAGTTGATCATTTGAATCCCTCAAGCAGTATACCCACACTTTCCTCTTTACCAAACATGAACAATGACAACACCTTAGAAGTCATAGCCCAATCCACAAACAGTCCAACTTCATCAACCCAACAACCTGAACAACATATTTCTGAAACTTCCAGCAATCATACAGTTAGAAGATCCACTCAAATCAACAAACAACCTTCTTATCTCTCGAAGCTTACCATTGCGCTTCCTACCTTACATGAACCAAACTTTTACCATGAGGTTGTCATACATGATGATTGGAGAAGGGTCATGGAAGCTGAACTAAAAGCTATGGAGGTTAATAAAACATGGAGTATAGTTCCTCTACCACCCGACAAGAATATTGTAGGATGCCTTGACTATTTTGAGATTTTAACACCTGTGGCTAAAATGGTAACTGTCAAAACCTTATTGACCATAGCAGTATCAAAAGATTGGCATCTACTTCAATTGGATGTGAATAATGCATTTCTACATGAAAACTTGTTTGAAGAAGTATACATGGATTTGCCTTTTGACGAAGCTAGTTTACTTGGTGCTAGACCAACGTCTATACCTATGGATCTAAAAACCAAATTAAAAGCTTTTGACAAAGACCTTCTTCAAGACCCAACTGCCTATCAGACACTAGTTGGAAAACTTCTGTACTTGACCATTTCAAGGCTTGATATCTCATTTGTTGTTTACAAGCTCAACCAATTCATGGCAAAACCTGACAAAACTCACATGAATGTAGCTAATCATCTCTTGAGATACATCAATGGTTCCCCGGGCCAAGGAATTTTTCTATCTAAAACAAATGATCTAATCTTGAAAGCATTTGCAAATGCTGATTGGGGATCATGCCCTGATACCCGCCGTTCAATCATCGAGTTTCATTCAAAGAAACAACAAACAATTTCACGGTCATCAGCTGAAGCAGAGTACCGAGCATTGGCCACTATTTCTTGTGAAGTTATCTGGCTCAAAAGTCTCCTCAAAGAGTTGCAGATTGCAATAAACGCACCTACTGTGGTGTTTTGTGATAATCAAGTTACAACTTACATAGCTAATAACTCCATTGTTTCATGA

Protein sequence

MEDPLPSFSLPKVFHESSVDHLNPSSSIPTLSSLPNMNNDNTLEVIAQSTNSPTSSTQQPEQHISETSSNHTVRRSTQINKQPSYLSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAELKAMEVNKTWSIVPLPPDKNIVGCLDYFEILTPVAKMVTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLPFDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGSCPDTRRSIIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKSLLKELQIAINAPTVVFCDNQVTTYIANNSIVS*
Homology
[Close]
BLAST of Cucsa.379770 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-22
Identity = 59/171 (34.50%), Postives = 95/171 (55.56%), Query Frame = 1 

Query: 186 LFEEVYMDLPFDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISR 245
           L +  Y +   + A +L  +P S P+ LK    +       DP+ ++++VG L YLT++R
Sbjct: 56  LSQTKYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTR 115

Query: 246 LDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGS 305
            DIS+ V  + Q M +P     ++   +LRY+ G+   G+++ K + L ++AF ++DW  
Sbjct: 116 PDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAG 175

Query: 306 CPDTRRS-----------IIEFHSKKQQTISRSSAEAEYRALATISCEVIW 346
           C  TRRS           II + +K+Q T+SRSS E EYRALA  + E+ W
Sbjct: 176 CTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Cucsa.379770 vs. Swiss-Prot
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15
Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 1 

Query: 239 LYLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAF 298
           +YLTI+R D++F V +L+QF +      M     +L Y+ G+ GQG+F S T+DL LKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 299 ANADWGSCPDTRRSIIEFHS 319
           A++DW SCPDTRRS+  F S
Sbjct: 61  ADSDWASCPDTRRSVTGFCS 80

[Close]
BLAST of Cucsa.379770 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-15
Identity = 61/211 (28.91%), Postives = 101/211 (47.87%), Query Frame = 1 

Query: 186  LFEEVYMDLPFDEASLLGARPTSIPMDLKTKLK------AFDKDLLQDPTAYQTLVGKLL 245
            L +E Y++   +  ++  A+P S P+    KL         ++        Y + VG L+
Sbjct: 1060 LSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1119

Query: 246  YLTI-SRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAF 305
            Y  + +R DI+  V  +++F+  P K H      +LRY+ G+ G  +    + D ILK +
Sbjct: 1120 YAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGS-DPILKGY 1179

Query: 306  ANADWGSCPDTRRS-----------IIEFHSKKQQTISRSSAEAEYRALATISCEVIWLK 365
             +AD     D R+S            I + SK Q+ ++ S+ EAEY A      E+IWLK
Sbjct: 1180 TDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLK 1239

Query: 366  SLLKELQIAINAPTVVFCDNQVTTYIANNSI 379
              L+EL +      VV+CD+Q    ++ NS+
Sbjct: 1240 RFLQELGLH-QKEYVVYCDSQSAIDLSKNSM 1268


HSP 2 Score: 58.5 bits (140), Expect = 1.8e-07
Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 1 

Query: 143 LDYFEILTPVAKMVTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLP 196
           +D+ EI +PV KM +++T+L++A S D  + QLDV  AFLH +L EE+YM+ P
Sbjct: 889 IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQP 941

[Close]
BLAST of Cucsa.379770 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 3.5e-11
Identity = 52/187 (27.81%), Postives = 92/187 (49.20%), Query Frame = 1 

Query: 207  TSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTI-SRLDISFVVYKLNQFMAKPDKT 266
            T +P  +  +L   D+D     T  ++L+G L+Y+ + +R D++  V  L+++ +K +  
Sbjct: 1160 TPLPSKINYELLNSDEDC---NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSE 1219

Query: 267  HMNVANHLLRYINGSPGQGIFLSKT----NDLILKAFANADWGSCPDTRRS--------- 326
                   +LRY+ G+    +   K     N +I   + ++DW      R+S         
Sbjct: 1220 LWQNLKRVLRYLKGTIDMKLIFKKNLAFENKII--GYVDSDWAGSEIDRKSTTGYLFKMF 1279

Query: 327  ---IIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKSLLKELQIAINAPTVVFCDNQV 377
               +I +++K+Q +++ SS EAEY AL     E +WLK LL  + I +  P  ++ DNQ 
Sbjct: 1280 DFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQG 1339


HSP 2 Score: 70.5 bits (171), Expect = 4.6e-11
Identity = 52/212 (24.53%), Postives = 88/212 (41.51%), Query Frame = 1 

Query: 20   DHLNPSSSIPTLSSLPNMNNDNTLEVIAQSTNSPTSSTQQPEQHISETSSNHTVRRSTQI 79
            DHLN S      S  PN + ++      +       +     + I+  S     +     
Sbjct: 814  DHLNESKG----SGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISY 873

Query: 80   NKQPSYLSKLTIALPTLHE--PNFYHEVVIHDD---WRRVMEAELKAMEVNKTWSIVPLP 139
            N++ + L+K+ +   T+    PN + E+   DD   W   +  EL A ++N TW+I   P
Sbjct: 874  NEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRP 933

Query: 140  PDKNIVGC-------------------------------LDYFEILTPVAKMVTVKTLLT 196
             +KNIV                                 +DY E   PVA++ + + +L+
Sbjct: 934  ENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILS 993

[Close]
BLAST of Cucsa.379770 vs. TrEMBL
Match: A5C2Z9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014760 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.3e-52
Identity = 141/437 (32.27%), Postives = 214/437 (48.97%), Query Frame = 1 

Query: 6   PSFSLPKVFHESSVDHLNPSSSIPTLSSLPNMNNDNTLEVIAQSTNSPTSSTQQPEQHIS 65
           PSFS       + + HL+ +SS      L   ++D+ L+ IA  + +P+  +  P   ++
Sbjct: 201 PSFSNSLCLPCNDIPHLSLTSSPGPQVPL---DDDSLLDSIATDSTTPSLVSSSPR--VT 260

Query: 66  ETSSNHTVRRSTQINKQPSY-------LSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAE 125
            +S     R    I K   Y        S+L  AL  L EP  +     H  W   M+ E
Sbjct: 261 NSSHPMITRGKAGIFKPRLYHVMHISSSSQLFQALLALKEPCGFKPAAKHPKWLSAMDDE 320

Query: 126 LKAMEVNKTWSIVPLPPDKNIVGC-------------------------------LDYFE 185
           + A++ N TW +VP P   N+VGC                               LD+ +
Sbjct: 321 IHALKKNDTWVLVPRPQHHNVVGCRWVFKTKLHSDGSIERHKACLVAQGFSQVHGLDFGD 380

Query: 186 ILTPVAKMVTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLP------------ 245
             +PV +  TV+ +L++AV+    L +LDV NAFLH  L EEVYM+ P            
Sbjct: 381 TFSPVVRPATVRIILSLAVTSGLRLHKLDVKNAFLHGFLNEEVYMEQPPGYTDPYQTKYD 440

Query: 246 ---FDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISRLDISFVV 305
                 AS++ A+P S P  +   L +    L  DPT +++L G L YLTI+R D+SF V
Sbjct: 441 LDLLQRASMIDAKPISTPFVVGQHL-SVGGTLFSDPTLFRSLAGALQYLTITRPDLSFSV 500

Query: 306 YKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGSCPDTRRS 365
             + QF+  P + H +    +LRY+ G+   G+ L K +   L  ++++DW  CPDTRRS
Sbjct: 501 NSICQFIHAPTEDHFHALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDSDWAGCPDTRRS 560

Query: 366 -----------IIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKSLLKELQIAINAPT 379
                      +I + SKKQ  +SRSSAEAEYR+LA  + ++ W+  LL++L + ++ P 
Sbjct: 561 TTGYAIFFGANLISWSSKKQSIVSRSSAEAEYRSLAIATADIAWIIQLLRDLHVTLSVPP 620

[Close]
BLAST of Cucsa.379770 vs. TrEMBL
Match: W9SY83_9ROSA (DNA polymerase theta OS=Morus notabilis GN=L484_019905 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49
Identity = 121/372 (32.53%), Postives = 184/372 (49.46%), Query Frame = 1 

Query: 67  TSSNHTVRRSTQINKQPSYLSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAELKAMEVNK 126
           T + H + +    +         T  L +++ P    E +   +W+  +  E++A+E N 
Sbjct: 42  TCTQHPISKFVSYDSLSPCFRAFTTKLCSVNIPRSIEEALAVPEWKNTVLEEMQALEKNN 101

Query: 127 TWSIVPLPPDKNIVGC-------------------------------LDYFEILTPVAKM 186
           TWS+V LP  K++VGC                               +DY E   PVAK 
Sbjct: 102 TWSVVELPQGKSVVGCKWVFTVKFKPDGSIERYKARLVAKGFTQTYGIDYTETFAPVAKF 161

Query: 187 VTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLP-------------------- 246
            T++ LL++A + DW L+Q DV NAFL+  L EEVYM LP                    
Sbjct: 162 NTIRVLLSLAANLDWPLVQFDVKNAFLNGELEEEVYMSLPPGFEEVARSKNGISISERKY 221

Query: 247 ----FDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISRLDISFV 306
                 E  +LG +P   P++   K KA   + + D   YQ LVGKL+YL+ +R DI+F 
Sbjct: 222 TLDLLQETGMLGCKPIETPIEQGGKAKAIGGE-MADRERYQRLVGKLIYLSHTRPDIAFA 281

Query: 307 VYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGSC----- 366
           +  ++Q M    + H      +LRY+  +PG+G+F  K  +  ++ F +ADW        
Sbjct: 282 ISVVSQQMHSLRQGHFEAIYRILRYLKKTPGRGLFFGKEENRRVEIFTDADWAGSVEDRN 341

Query: 367 --PDTRRSIIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKSLLKELQIAINAPTVVF 377
             PD   +++ + SKKQ  ++RSSAEAEYRA+A  +C+ IWLK LL+EL+I+      ++
Sbjct: 342 QDPDIAHALVTWRSKKQFVVARSSAEAEYRAMAHGTCKAIWLKRLLEELKISCEFTMQLY 401

[Close]
BLAST of Cucsa.379770 vs. TrEMBL
Match: A0A151R3P5_CAJCA (Copia protein (Fragment) OS=Cajanus cajan GN=KK1_041604 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-48
Identity = 111/333 (33.33%), Postives = 176/333 (52.85%), Query Frame = 1 

Query: 98  EPNFYHEVVIHDDWRRVMEAELKAMEVNKTWSIVPLPPDKNIVGC--------------- 157
           EP  Y E ++   W+  ++ E++A+++ KTW IV  P     +GC               
Sbjct: 339 EPRSYQEAILKPCWKEAVKNEIEALKLKKTWEIVETPKHVKPIGCRWVYKIKKKPDGSVE 398

Query: 158 ----------------LDYFEILTPVAKMVTVKTLLTIAVSKDW-----------HLLQL 217
                           +D+FE  +PV KM T++ +L +A   +W           + L L
Sbjct: 399 RYKARLVAKGFSQVEGIDFFETFSPVVKMATIRVILALASINNWIQFSKDLGELKYFLGL 458

Query: 218 DVNNAFLHENLFEEVYMDLPFDEASLLGARPTSIPMDLKTKLK-AFDKDLLQDPTAYQTL 277
           +V+ +     + +  Y       + LLG +P+S PMD   +LK A   +LL DP +Y+ L
Sbjct: 459 EVSKSDDGIFVSQRKYRLELLSNSGLLGCKPSSTPMDSSLRLKKANSSELLDDPLSYRRL 518

Query: 278 VGKLLYLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLI 337
           +G+L+YLT++R DI F   +L+QFMA P K+H+     +L+Y+ G P +G++  + + + 
Sbjct: 519 IGRLIYLTMTRSDIVFATQQLSQFMANPAKSHLGATKRVLKYLKGCPNKGLYFKRNSPIH 578

Query: 338 LKAFANADWGSCPDTRRSI-----------IEFHSKKQQTISRSSAEAEYRALATISCEV 377
           L  F++ADW +C  TRRS+           I + +K Q T+SRSS+EAEYRALAT + E+
Sbjct: 579 LIRFSDADWATCVSTRRSVTGYCFFIGNSLISWKTKNQNTVSRSSSEAEYRALATSTYEL 638

[Close]
BLAST of Cucsa.379770 vs. TrEMBL
Match: A0A151SA70_CAJCA (Copia protein (Fragment) OS=Cajanus cajan GN=KK1_026451 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.0e-47
Identity = 118/330 (35.76%), Postives = 167/330 (50.61%), Query Frame = 1 

Query: 103 HEVVIHDDWRRVMEAELKAMEVNKTWSIVPLPPDKNIVGC-------------LD----- 162
           HE + H  WR+ M AE++A+E + TW +VPLP  K  VGC             +D     
Sbjct: 4   HEALDHPGWRQAMIAEMQALEHSDTWELVPLPLGKQPVGCRWVYAIKVGPDGTVDRLKAR 63

Query: 163 -------------YFEILTPVAKMVTVKTLLTIAVSKDWHLLQ----------LDVNNAF 222
                        Y +  +P+AK+ TV+  L +A  + W L Q          L +  A 
Sbjct: 64  LVAKGYTQIYGLDYGDTFSPMAKIPTVRLFLAMAAIRHWPLFQTKDLGHLRYFLGIEVAQ 123

Query: 223 LHENLF--EEVYMDLPFDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLL 282
             E +   +  Y      E  +L  +P   PMD   KL     +L  D   Y+ LVGKL+
Sbjct: 124 SKEGIVISQRKYAIDILKETDMLDCKPIDSPMDPNQKLMVDQGELFTDLERYRRLVGKLI 183

Query: 283 YLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFA 342
           YLTI+R D+ F V  ++QFM  P   H NV   +LRYI  +PGQG+      D  +  + 
Sbjct: 184 YLTITRPDLCFAVGIVSQFMQAPHINHWNVVLRILRYIKKAPGQGLLYEDKGDSQISGYC 243

Query: 343 NADWGSCPDTRRS-----------IIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKS 379
           +ADW  CP  RRS           +I + SKKQ  ++RSSAEAEYRA+A I+CE++W+K 
Sbjct: 244 DADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMALITCELMWIKQ 303

[Close]
BLAST of Cucsa.379770 vs. TrEMBL
Match: A5AZI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010353 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.3e-44
Identity = 103/242 (42.56%), Postives = 151/242 (62.40%), Query Frame = 1 

Query: 115 MEAELKAMEVNKTWSIVPLPPDKNIVGCLDYFEI-LTPVAKMVTVKTLLTIAVSKDWHLL 174
           M+AEL A+E N TWS+  LP  K  +GC   +++     AK+VTVK +L + V+  W L+
Sbjct: 1   MKAELHALEENGTWSLTTLPLGKRAMGCKWVYKLKFRADAKLVTVKLVLALVVTHGWFLV 60

Query: 175 QLDVNNAFLHENLFEEVYMDLPFDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQT 234
           Q DVNNAFLH++L +EVYM LP     L   + T   ++L       D +LL+DP  Y+ 
Sbjct: 61  QFDVNNAFLHDDLTKEVYMSLP---QGLQTCKHTHGAINLSQD----DGELLEDPNLYRR 120

Query: 235 LVGKLLYLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDL 294
           L+GKLLYLTI+R ++++ V + NQ++A    TH+   + +L+YI  + GQG+  S ++ +
Sbjct: 121 LIGKLLYLTITRPNLAYSVNRPNQYLANLRSTHLQGVHRILQYIKVTVGQGLHFSASSSV 180

Query: 295 ILKAFANADWGSCPDTRRSI-----------IEFHSKKQQTISRSSAEAEYRALATISCE 345
            LKAF + DWG+C DTRRSI           I +  KK+  +SRSS EAEYR +A ++CE
Sbjct: 181 HLKAFVDLDWGACKDTRRSISGFCVFLGDSLISWKYKKKSFVSRSSTEAEYRVMANVTCE 235

[Close]
BLAST of Cucsa.379770 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-41
Identity = 88/219 (40.18%), Postives = 129/219 (58.90%), Query Frame = 1 

Query: 171 HLLQLDVNNAFLHENLFEEVYMDLPFDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTA 230
           + L L++  +    N+ +  Y     DE  LLG +P+S+PMD      A       D  A
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377

Query: 231 YQTLVGKLLYLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKT 290
           Y+ L+G+L+YL I+RLDISF V KL+QF   P   H      +L YI G+ GQG+F S  
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437

Query: 291 NDLILKAFANADWGSCPDTRR-----------SIIEFHSKKQQTISRSSAEAEYRALATI 350
            ++ L+ F++A + SC DTRR           S+I + SKKQQ +S+SSAEAEYRAL+  
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497

Query: 351 SCEVIWLKSLLKELQIAINAPTVVFCDNQVTTYIANNSI 379
           + E++WL    +ELQ+ ++ PT++FCDN    +IA N++
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536


HSP 2 Score: 53.1 bits (126), Expect = 4.3e-07
Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 1 

Query: 143 LDYFEILTPVAKMVTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLP 196
           +D+ E  +PV K+ +VK +L I+   ++ L QLD++NAFL+ +L EE+YM LP
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213

[Close]
BLAST of Cucsa.379770 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-23
Identity = 59/171 (34.50%), Postives = 95/171 (55.56%), Query Frame = 1 

Query: 186 LFEEVYMDLPFDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISR 245
           L +  Y +   + A +L  +P S P+ LK    +       DP+ ++++VG L YLT++R
Sbjct: 56  LSQTKYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTR 115

Query: 246 LDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGS 305
            DIS+ V  + Q M +P     ++   +LRY+ G+   G+++ K + L ++AF ++DW  
Sbjct: 116 PDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAG 175

Query: 306 CPDTRRS-----------IIEFHSKKQQTISRSSAEAEYRALATISCEVIW 346
           C  TRRS           II + +K+Q T+SRSS E EYRALA  + E+ W
Sbjct: 176 CTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Cucsa.379770 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 85.9 bits (211), Expect = 5.9e-17
Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 1 

Query: 239 LYLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAF 298
           +YLTI+R D++F V +L+QF +      M     +L Y+ G+ GQG+F S T+DL LKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 299 ANADWGSCPDTRRSIIEFHS 319
           A++DW SCPDTRRS+  F S
Sbjct: 61  ADSDWASCPDTRRSVTGFCS 80

[Close]
BLAST of Cucsa.379770 vs. NCBI nr
Match: gi|1000943174|ref|XP_015582020.1| (PREDICTED: uncharacterized protein LOC107262199 [Ricinus communis])

HSP 1 Score: 225.7 bits (574), Expect = 1.4e-55
Identity = 136/409 (33.25%), Postives = 211/409 (51.59%), Query Frame = 1 

Query: 23  NPSSSIPTLSS--LPNMNNDNTLEVIAQSTNSPTSSTQQPEQHISETSS---NHTVRRST 82
           +PS   P L +  L   N   T E+  + +  PT    + + ++S + S   +H +  ++
Sbjct: 467 SPSGGDPELPTEELALRNESPTKELALRRSTKPTRPPARLKDYVSNSVSYPIHHFISYNS 526

Query: 83  QINKQPSYLSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAELKAMEVNKTWSIVPLPPDK 142
             +   +YL+ LT    +  EP  +++     +W + M+ EL+A+E N+TW +V LP +K
Sbjct: 527 VSSSYRTYLNTLT----SHTEPTSFYDANTDPNWCKAMKEELQALEKNETWDLVTLPSNK 586

Query: 143 NIVGCL-------------------------------DYFEILTPVAKMVTVKTLLTIAV 202
             VG                                 DY E   PVAKM T++ LL++A 
Sbjct: 587 KPVGYKWVYKIKYKHDGTIERYKARLVAKGFTQTYGVDYQETFAPVAKMSTIRILLSVAT 646

Query: 203 SKDWHLLQLDVNNAFLHENLFEEVYMDLPFD----------------EASLLGARPTSIP 262
           +  W L Q+DV NAFL  +L EEVYM LP D                E   +GA+P   P
Sbjct: 647 NSGWSLFQMDVKNAFLQGSLAEEVYMKLPPDHTLASEPSLYVLDLLQETEKIGAKPVDTP 706

Query: 263 MDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISRLDISFVVYKLNQFMAKPDKTHMNVA 322
           M+ K +    D D L D   YQ LVGKL+YL ++R DIS+ V  ++QFM  P  +H++  
Sbjct: 707 METKNRFNLDDGDPLSDIGHYQRLVGKLIYLIVTRPDISYAVSMISQFMHAPRTSHLDAV 766

Query: 323 NHLLRYINGSPGQGIFLSKTNDL-ILKAFANADWGSCPDTRRSIIEFHSKKQQTISRSSA 379
           + +LRY+ G+PGQGI +   N+   +  F++ADW S  D + +      KKQ   +RSSA
Sbjct: 767 DRILRYLKGTPGQGILMKNNNNANTVAGFSDADWASSCDRKST----SGKKQSVTARSSA 826

[Close]
BLAST of Cucsa.379770 vs. NCBI nr
Match: gi|950985482|ref|XP_014503350.1| (PREDICTED: uncharacterized protein LOC106763698 [Vigna radiata var. radiata])

HSP 1 Score: 223.4 bits (568), Expect = 6.7e-55
Identity = 132/376 (35.11%), Postives = 186/376 (49.47%), Query Frame = 1 

Query: 64  ISETSSNHTVRRSTQINKQPSYLSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAELKAME 123
           I +T   + +      N+         +++ +  EP  Y        W + M AEL A++
Sbjct: 429 IPDTFVRYPISNYLHYNRLSPTFKHTILSISSNVEPTCYSAASKQPQWVKAMHAELDALQ 488

Query: 124 VNKTWSIVPLPPDKNIVGCLDYFEILTP-------------------------------V 183
            N TW I  LPP+K  +GC   ++I                                  V
Sbjct: 489 ANNTWEITTLPPNKTAIGCRWIYKIKYNSDGSIKRYKARLVAKGYNQIEGLEFLDTFAPV 548

Query: 184 AKMVTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLP----------------- 243
           AK+ TV+ LL IA S+ W L QLDVNN FLH +L E+VYM LP                 
Sbjct: 549 AKLTTVRLLLAIAASQCWPLKQLDVNNTFLHGDLHEDVYMKLPPGLTTANKNQLRKYVLD 608

Query: 244 -FDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTA-YQTLVGKLLYLTISRLDISFVVY 303
              E  LL + P   PM  K       + L  D  A Y+ L+GKL+YLT +R DI+F V 
Sbjct: 609 LLAETGLLDSSPVPTPMVPKQSSTNTARSLDDDDVASYRRLIGKLIYLTTTRPDITFAVN 668

Query: 304 KLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGSCPDTRR-- 363
            L+QFM+ P   H    N +LRY+ G+PG GI     + + LKAF ++DW +CPDTRR  
Sbjct: 669 HLSQFMSTPTTAHQQATNRILRYLKGTPGAGIHFPSNSTIQLKAFCDSDWATCPDTRRLV 728

Query: 364 ---------SIIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKSLLKELQIAINAPTV 379
                    S+I + SKKQ  +SRSS++AEY +LA+I CE+ WL  LL +  +A  +P +
Sbjct: 729 TGFTVYLGNSLISWRSKKQPIVSRSSSKAEYHSLASIVCELQWLTYLLHDFHVAHTSPAL 788

[Close]
BLAST of Cucsa.379770 vs. NCBI nr
Match: gi|657996196|ref|XP_008390461.1| (PREDICTED: uncharacterized protein LOC103452707 [Malus domestica])

HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53
Identity = 158/462 (34.20%), Postives = 221/462 (47.84%), Query Frame = 1 

Query: 3   DPLPSFSLPKVFHESSVDHLNPSSSI-PTLSSLPNMNNDNTLEVIAQSTNSPTSSTQQPE 62
           D LPS  LP +        L PS S  PT  S      D  +E+   S  +P SST   +
Sbjct: 408 DILPS-PLPHIPLSPPNPTLPPSRSTQPTKPS--TFLQDFHVEMALPSRVAPPSSTSMVQ 467

Query: 63  QHISETSSNHTVRRSTQINKQPSYLSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAEL-- 122
              +  S +  +      +    +L+ LTI      EP  + + V    WR  M+ EL  
Sbjct: 468 SSGTPHSLSCYLSYDRLSSPHKLFLANLTIT----KEPTSFSQAVQDPQWRAAMQHELAA 527

Query: 123 --------------KAMEVNKTWSI-VPLPPDKNI--------------VGCLDYFEILT 182
                             +   W   V L PD ++              +  LDY E   
Sbjct: 528 LQDNRTWTLVPLPSYKRPIGCKWVYKVKLKPDGSVERYKARLVTKGYRQIEGLDYRETFA 587

Query: 183 PVAKMVTVKTLLTIAVSKDWHLLQLDVNNAFLHENLF---------------EEVYMDLP 242
           PVAK+ TV+ LL++A    WH  QLDVNNAFLH +L+               E    DL 
Sbjct: 588 PVAKLTTVRVLLSVASLHGWHPHQLDVNNAFLHGDLYEDVYMSLPFGFGRKWETRLKDLG 647

Query: 243 ----------------------------FDEASLLGARPTSIPMDLKTKLKAFDKDLLQD 302
                                        ++A  LG +P+  PM+    L   D  LL D
Sbjct: 648 KLKYFLGIEVARSKQGIALCQRKYALEILEDAGFLGVKPSRFPMEPNLSLTQTDGTLLHD 707

Query: 303 PTAYQTLVGKLLYLTISRLDISFVVYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFL 362
           P++Y+ LVG+L+YLTI+R D+++VV  L+QFM +P + H+   + ++RYI  SPGQGIFL
Sbjct: 708 PSSYRRLVGRLIYLTITRPDLTYVVNMLSQFMDQPRQPHLEAIHKVIRYIKQSPGQGIFL 767

Query: 363 SKTNDLILKAFANADWGSCPDTRRSI-----------IEFHSKKQQTISRSSAEAEYRAL 379
             T  L L+AF +ADW  C  TRRSI           + +  KKQ T+SRSSAEAEYR++
Sbjct: 768 PFTGSLQLQAFYDADWARCKATRRSITGYCIFLGQAPMSWKMKKQSTVSRSSAEAEYRSM 827

[Close]
BLAST of Cucsa.379770 vs. NCBI nr
Match: gi|147855366|emb|CAN83877.1| (hypothetical protein VITISV_014760 [Vitis vinifera])

HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 141/437 (32.27%), Postives = 214/437 (48.97%), Query Frame = 1 

Query: 6   PSFSLPKVFHESSVDHLNPSSSIPTLSSLPNMNNDNTLEVIAQSTNSPTSSTQQPEQHIS 65
           PSFS       + + HL+ +SS      L   ++D+ L+ IA  + +P+  +  P   ++
Sbjct: 201 PSFSNSLCLPCNDIPHLSLTSSPGPQVPL---DDDSLLDSIATDSTTPSLVSSSPR--VT 260

Query: 66  ETSSNHTVRRSTQINKQPSY-------LSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAE 125
            +S     R    I K   Y        S+L  AL  L EP  +     H  W   M+ E
Sbjct: 261 NSSHPMITRGKAGIFKPRLYHVMHISSSSQLFQALLALKEPCGFKPAAKHPKWLSAMDDE 320

Query: 126 LKAMEVNKTWSIVPLPPDKNIVGC-------------------------------LDYFE 185
           + A++ N TW +VP P   N+VGC                               LD+ +
Sbjct: 321 IHALKKNDTWVLVPRPQHHNVVGCRWVFKTKLHSDGSIERHKACLVAQGFSQVHGLDFGD 380

Query: 186 ILTPVAKMVTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLP------------ 245
             +PV +  TV+ +L++AV+    L +LDV NAFLH  L EEVYM+ P            
Sbjct: 381 TFSPVVRPATVRIILSLAVTSGLRLHKLDVKNAFLHGFLNEEVYMEQPPGYTDPYQTKYD 440

Query: 246 ---FDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISRLDISFVV 305
                 AS++ A+P S P  +   L +    L  DPT +++L G L YLTI+R D+SF V
Sbjct: 441 LDLLQRASMIDAKPISTPFVVGQHL-SVGGTLFSDPTLFRSLAGALQYLTITRPDLSFSV 500

Query: 306 YKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGSCPDTRRS 365
             + QF+  P + H +    +LRY+ G+   G+ L K +   L  ++++DW  CPDTRRS
Sbjct: 501 NSICQFIHAPTEDHFHALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDSDWAGCPDTRRS 560

Query: 366 -----------IIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKSLLKELQIAINAPT 379
                      +I + SKKQ  +SRSSAEAEYR+LA  + ++ W+  LL++L + ++ P 
Sbjct: 561 TTGYAIFFGANLISWSSKKQSIVSRSSAEAEYRSLAIATADIAWIIQLLRDLHVTLSVPP 620

[Close]
BLAST of Cucsa.379770 vs. NCBI nr
Match: gi|703159111|ref|XP_010112166.1| (DNA polymerase theta [Morus notabilis])

HSP 1 Score: 205.3 bits (521), Expect = 1.9e-49
Identity = 121/372 (32.53%), Postives = 184/372 (49.46%), Query Frame = 1 

Query: 67  TSSNHTVRRSTQINKQPSYLSKLTIALPTLHEPNFYHEVVIHDDWRRVMEAELKAMEVNK 126
           T + H + +    +         T  L +++ P    E +   +W+  +  E++A+E N 
Sbjct: 42  TCTQHPISKFVSYDSLSPCFRAFTTKLCSVNIPRSIEEALAVPEWKNTVLEEMQALEKNN 101

Query: 127 TWSIVPLPPDKNIVGC-------------------------------LDYFEILTPVAKM 186
           TWS+V LP  K++VGC                               +DY E   PVAK 
Sbjct: 102 TWSVVELPQGKSVVGCKWVFTVKFKPDGSIERYKARLVAKGFTQTYGIDYTETFAPVAKF 161

Query: 187 VTVKTLLTIAVSKDWHLLQLDVNNAFLHENLFEEVYMDLP-------------------- 246
            T++ LL++A + DW L+Q DV NAFL+  L EEVYM LP                    
Sbjct: 162 NTIRVLLSLAANLDWPLVQFDVKNAFLNGELEEEVYMSLPPGFEEVARSKNGISISERKY 221

Query: 247 ----FDEASLLGARPTSIPMDLKTKLKAFDKDLLQDPTAYQTLVGKLLYLTISRLDISFV 306
                 E  +LG +P   P++   K KA   + + D   YQ LVGKL+YL+ +R DI+F 
Sbjct: 222 TLDLLQETGMLGCKPIETPIEQGGKAKAIGGE-MADRERYQRLVGKLIYLSHTRPDIAFA 281

Query: 307 VYKLNQFMAKPDKTHMNVANHLLRYINGSPGQGIFLSKTNDLILKAFANADWGSC----- 366
           +  ++Q M    + H      +LRY+  +PG+G+F  K  +  ++ F +ADW        
Sbjct: 282 ISVVSQQMHSLRQGHFEAIYRILRYLKKTPGRGLFFGKEENRRVEIFTDADWAGSVEDRN 341

Query: 367 --PDTRRSIIEFHSKKQQTISRSSAEAEYRALATISCEVIWLKSLLKELQIAINAPTVVF 377
             PD   +++ + SKKQ  ++RSSAEAEYRA+A  +C+ IWLK LL+EL+I+      ++
Sbjct: 342 QDPDIAHALVTWRSKKQFVVARSSAEAEYRAMAHGTCKAIWLKRLLEELKISCEFTMQLY 401

The following BLAST results are available for this feature:
BLAST of Cucsa.379770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
M810_ARATH4.4e-2234.50Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
M240_ARATH1.1e-1550.00Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg0... [more]
POLX_TOBAC3.1e-1528.91Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME3.5e-1127.81Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
BLAST of Cucsa.379770 vs. TrEMBL
Match NameE-valueIdentityDescription
A5C2Z9_VITVI8.3e-5232.27Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014760 PE=4 SV=1[more]
W9SY83_9ROSA1.3e-4932.53DNA polymerase theta OS=Morus notabilis GN=L484_019905 PE=4 SV=1[more]
A0A151R3P5_CAJCA1.9e-4833.33Copia protein (Fragment) OS=Cajanus cajan GN=KK1_041604 PE=4 SV=1[more]
A0A151SA70_CAJCA8.0e-4735.76Copia protein (Fragment) OS=Cajanus cajan GN=KK1_026451 PE=4 SV=1[more]
A5AZI6_VITVI8.3e-4442.56Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010353 PE=4 SV=1[more]
BLAST of Cucsa.379770 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.12.0e-4140.18 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00810.12.5e-2334.50ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
ATMG00240.15.9e-1750.00ATMG00240.1 Gag-Pol-related retrotransposon family protein[more]
BLAST of Cucsa.379770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1000943174|ref|XP_015582020.1|1.4e-5533.25PREDICTED: uncharacterized protein LOC107262199 [Ricinus communis][more]
gi|950985482|ref|XP_014503350.1|6.7e-5535.11PREDICTED: uncharacterized protein LOC106763698 [Vigna radiata var. radiata][more]
gi|657996196|ref|XP_008390461.1|1.7e-5334.20PREDICTED: uncharacterized protein LOC103452707 [Malus domestica][more]
gi|147855366|emb|CAN83877.1|1.2e-5132.27hypothetical protein VITISV_014760 [Vitis vinifera][more]
gi|703159111|ref|XP_010112166.1|1.9e-4932.53DNA polymerase theta [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.379770.1Cucsa.379770.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 143..195
score: 3.4
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 16..362
score: 1.3
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 16..362
score: 1.3
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 162..378
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.379770Cucurbita pepo (Zucchini)cgycpeB1002
Cucsa.379770Cucurbita pepo (Zucchini)cgycpeB1003
Cucsa.379770Bottle gourd (USVL1VR-Ls)cgylsiB614
Cucsa.379770Bottle gourd (USVL1VR-Ls)cgylsiB615
Cucsa.379770Bottle gourd (USVL1VR-Ls)cgylsiB616
Cucsa.379770Melon (DHL92) v3.6.1cgymedB613
Cucsa.379770Melon (DHL92) v3.6.1cgymedB615
Cucsa.379770Silver-seed gourdcarcgyB0362
Cucsa.379770Silver-seed gourdcarcgyB0402
Cucsa.379770Silver-seed gourdcarcgyB0986
Cucsa.379770Cucumber (Chinese Long) v3cgycucB576
Cucsa.379770Cucumber (Chinese Long) v3cgycucB577
Cucsa.379770Watermelon (97103) v2cgywmbB651
Cucsa.379770Watermelon (97103) v2cgywmbB652
Cucsa.379770Watermelon (97103) v2cgywmbB653
Cucsa.379770Wax gourdcgywgoB758
Cucsa.379770Cucumber (Gy14) v1cgycgyB019
Cucsa.379770Cucurbita maxima (Rimu)cgycmaB1047
Cucsa.379770Cucurbita maxima (Rimu)cgycmaB1048
Cucsa.379770Cucurbita maxima (Rimu)cgycmaB1049
Cucsa.379770Cucurbita moschata (Rifu)cgycmoB1046
Cucsa.379770Cucurbita moschata (Rifu)cgycmoB1047
Cucsa.379770Cucurbita moschata (Rifu)cgycmoB1048
Cucsa.379770Wild cucumber (PI 183967)cgycpiB560
Cucsa.379770Wild cucumber (PI 183967)cgycpiB561
Cucsa.379770Cucumber (Chinese Long) v2cgycuB531
Cucsa.379770Cucumber (Chinese Long) v2cgycuB532
Cucsa.379770Cucumber (Chinese Long) v2cgycuB533
Cucsa.379770Melon (DHL92) v3.5.1cgymeB617
Cucsa.379770Melon (DHL92) v3.5.1cgymeB616
Cucsa.379770Melon (DHL92) v3.5.1cgymeB619
Cucsa.379770Melon (DHL92) v3.5.1cgymeB620
Cucsa.379770Watermelon (Charleston Gray)cgywcgB647
Cucsa.379770Watermelon (Charleston Gray)cgywcgB648
Cucsa.379770Watermelon (Charleston Gray)cgywcgB649
Cucsa.379770Watermelon (Charleston Gray)cgywcgB650
Cucsa.379770Watermelon (97103) v1cgywmB684
Cucsa.379770Watermelon (97103) v1cgywmB685
Cucsa.379770Watermelon (97103) v1cgywmB686
Cucsa.379770Watermelon (97103) v1cgywmB687