Cucsa.378750 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAATCCAACTTCATAACAGTCACTAATCGATTCAATGGAGCTTTCTCTTCTTCTTCCTTCCTACAAACAAAACCCCACTATTTTCCACAAGCCCCTCAACCCCTCCGCCATTATCGGTCTCTCTTTCACTTTCTGTCTCTCTTTTCTCAGTTTTCTTTTTGTGGGTTTCTTTCAGAATGAGTTAATCTCTTTGAATTTTCAGGGAAGAGGCGGCCATCTCTTTTCCCTTGTCGATGCTCCTTGTCGTCTTCACAAGAAGAATCTTCAGAACAAGCTAAAGAATCGCTGGGGTGTGAGGGAAGAAGGGCATTGATTGGTTCTCTCCTGTCGACGGGTATGTCTTTTTtATTTTGGAGAAGATCGTTTCGGTATTGTTGAATCCATCTCGAACTCGTGGAATGTGATTTGATTCAGTAAGGTTACCTTACGGTTGGTTGTTGTTGAAGTTTTGTTGTAATCTGGAGTTAAACCTGACTAATGTCTCCGCATTGTTGAGTATTAAGCTTTAGGTAGATGGGTCTGATAGGGAGACCACAAGAGCAACTCTAAGGGAATATCGTTTGTTCAAGTAACGTATTTGGGTCTGGAGACTGGAATTGGTGTTAAAAGGTGTTTTGCATCGATAGCTTTTTATTATATATAAAATATGTATCATATGTTCGTGAGTATTTTTTCTCAACTATTTTCATGGATGAAACAACTGCATTTTTCAATATCTTTCAATATCTGTGAGTGTTTGGACTAGCTTACTTGTATCGACTAATCTCACAAGTCACAAGACAACTCGTCAACCCTATAACATTTGGATATCAAAGAAATTTGTAGAAAATTAACTTTTAACTAGCTAGCCATAATCGATTGAACTGAACTCATGCTTTCTTAGTCCTTTATTGAGACCGTCTTTCTTTTTTAACATTAGACCAACCCGTGATGACACAACTAGAGTCCGTTTGGATTAGCTGGGGAAGACAAAGTTTTGTTTTTTTTtATATATATAAATAAAAAGTTATTTTTATTTAAACTCTTTTGATAAAAAGTATAAAATAAACTAACGAAAGTGTTTCAAACGCCATTTTCCAAAACACTTTAAAATTTTCTAAAATGACTTATTTTCAAGATTAAATACTTTGAAAAACTAAACCAAATACACCCTTAATCATCAAGAAAATTGATAGGATATTAAATCATACATAAATGACTCCTATGATCTTTAAGCATTGAATGTCACTCGCTCCAAGTACTTATTGTTTACTGTTCACTAGATCAATCCTTGGTAGTTTGTTTTCCATCATTAGTGTCTGATTCAGAGATGGTGTAAAAGAGTTAGCACTTTGACTCTTATGCTTCATTAGTATAGAGAACTACCGTAGTAAACTAGGATCTATTCTTACATTGCCCTATACATGATTGACAAGTAGTTTGTTTAGGGCTCTTTGTTATTGACTTTGTTGTGTCTGTCGTCCCTTTCCATCCTGTGTAAGTTACTAATTTTGTTTTTTGAATCCTCCTTTTGTTTCAGCTACTGGCATATATTTCTGCAATGTAGCCGAGGCTGTTAGCACAAGTAGAAGGGCTGTAAGTATTTTTTTtCCCGTTGATTCACAAGGAATAATTTCACCTTCATTTTGCTCTTTTTTCCATCAAAGAAAAGATGTATTTTTCTTTTAGTTGTAGAAGTGTTTGAAAAGCCTCTACTTTTACAGTTAAGAGCATCAAAAATACCTGAAAGTGAGTTTACAACTCTCCCGAATGGTCTGAAGTAAGTTCCTTCCACTGCCATCATTATGAAGTTTGTGCTTCTTTTGTATGTTACTACTCTTCCTCATCTCTTTGGAGTTCTTTATTGTCTCGTACGATGCATCTTCATCGTTGATGATGACTATCGACACAATTCtGTTTTTTCATGTCTTAAAATCTCCTCTTGGAATAACTTTAAGCTAGAGATTATCTTTCTTATAAAATATTCTtAACTCATGCTAATTCCAAGATGGGGTTGGTTGTGGTCTTGTTTTTCTGCAAACATATGCTGAAACTCAGAAAAGAAATGTATCCTTCAGGTACTATGACTTGAAGGTTGGAGGAGGAACTAAGGCTGTGAATGGATCCCGTGTTGCAGTACGGTTGTGAGCTAGCTGTATTTTTATATTCAACTTACAAGATCTTGAACTAATTTTTTTTttCCAAAAAGAAACAGAATGGCTAAGACATTGAACGTGTGTAACAACCACAAATCTTTGAACACTTGGGAAACTATTATGCACAAAAAATGCACGTATCTTGTCTTTGATTGACACTTCTAAGATGCCACCTCTTAGAAGAATAACTTCCATGTCATTCTCGGACGTTTGTTTATTCCCTACTAAAATCTTAGATAACCAATGAGCCTCTGATGGAATCCTATACTGGTCCTGAGAAAATTACTCTCTGGTTCAATGTGTCCCATCCTCATTTCTTTAGTAAATGTATACTTCTGTTTTTGCTCTCAAGAAAGTTTAGTGTTTATTCTTTTATATATATATATATAAAAAaGAAAGAAAGAAAAGAAAGCACATAGATTTCGTTGATATTTAAAAGTTACAAACTAGAAACTTCTACAGAAACATATCAACAAAAACCAGACTAAACAATCTACAATATGAAGGATTACAAAAAAaGAAAAAAAaTCAGAATCACTCCAATAGGAAATAATCTGAGAAAAAGAAAAACCTCCAAAAACTTTGGATAAAGAACTTCAAGAAGCTGCACGAATCTTAGATTAGATAAAAAGTTTCCTCCTAAGTTTGCTAATGCTGATCCATAACACTCTTGTTTTTCCTTCAAAACCATGGCCACAAAAAGGAACGAAAAAGTTGTTCTTGGCCCTGAAATTCTCGAGAAATTTCTATGGGAAAAAGTATGTATGGTAATCAATAGTTTTTCTTATATCTCAAGCTTGGATCTATTCTTCAGCCATTAAATCGTATCAGTGCACGGTCCATGTTTGTGGGGGTGGACCATGATCCAAACTTTAGTGTGTTCTAAGAAGTTCTACCATAGTCCATGTTTGTGGGGTGGGGTCAGGGGGAGAGACCCTCAAAAACCAACTTAATTCTATGCAAAACTAAAAGTATAATGTGTCATTTTGTAGGTTCACTATGTGGCTAAATGGAGAGGGATCACCTTTATGACAAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGGTATAATTAACTAAACCAATTTATACTTTTTTAAGTTCAACAGTTGAATAAAAAAATTTCAAATCTTAAGATATTGAAaTTTTTtAATGATATATTTTAAAAAaGAAAaCTTTAAGTGGATATGCTTGAATTGCTGCAGCCTTACGGATTTGATGTAGGGCAATCAGAACGAGGAACAGTCCTCAAGGGTTTGGATCTAGGTGTTCAAGGCATGAGGGTAGGAGGCCAGGTGAGAAACCATCTGAATATGAGAATTGACTGAAGGCCCGTTCAGATTTACTTTATAAGTGTTTATAAACATCTTTTGCACTTAAAAACACTTGTTAAATTAAAACACCTAAAAAATCAATTGAAACGGACCCTAAATGATCTCTCATTATGCCTATTGCTTGCCAGTTTTTCAGTTTTGCTGAAATACTTCGTCTATTTTTTTTTtCACAGAGATTGCTTATAGTTCCTCCTGAGTTAGCTTACGGAAGCAAAGGGGTTCAAGAAATTCCTCCAAATGCAACAATAGAGGTAACTTTTCTTTAGGGGCTTTACCATTGTTGTATTTGTTCATAAGTAGCAAGCTTAGACAGAAATGTTTGTGCATTCCTATTACAAGAACTATTTCCTAATGCAAATGAGAAACTGAACAACAAGAATATTTCTTACCTTCTTGTTTTCTGTTCAACTAATTGGATTTGCTGTTGTGATCGTCTTTGGATCTTTTAGTTGGATGTGGAATTGCTATCCATCAAGCAAAGTCCATTTGGGTAAGTAGTGGTTCTTGATATTCTTCAGTATCTTGGTGGATTTTTTTTtCTTCTTTGATTAGTTTTACCTTTTTtCGTGAGTGCAGAACTCCAGTAAAAATTGTTGAAGGTTAATAAACAAAACTGTTCTGATAGCGCGATATCTCAGTGATGTGGACTGGCAAAGATTGAAACTATGAAATTGGTGCTGAAGGGAAAAGCTTACCTGGTTTGAATTTGAATCTTCTTTATTCAGCAAGATATGTCCATTACCTTTTtATTTAATATTTAATTTTtATTGAAATGTAAATTCATTCTCCCATCTTAATGAATATTACTTGTACTTTATGGAAAGCAA GAATCCAACTTCATAACAGTCACTAATCGATTCAATGGAGCTTTCTCTTCTTCTTCCTTCCTACAAACAAAACCCCACTATTTTCCACAAGCCCCTCAACCCCTCCGCCATTATCGGGAAGAGGCGGCCATCTCTTTTCCCTTGTCGATGCTCCTTGTCGTCTTCACAAGAAGAATCTTCAGAACAAGCTAAAGAATCGCTGGGGTGTGAGGGAAGAAGGGCATTGATTGGTTCTCTCCTGTCGACGGCTACTGGCATATATTTCTGCAATGTAGCCGAGGCTGTTAGCACAAGTAGAAGGGCTTTAAGAGCATCAAAAATACCTGAAAGTGAGTTTACAACTCTCCCGAATGGTCTGAAGTACTATGACTTGAAGGTTGGAGGAGGAACTAAGGCTGTGAATGGATCCCGTGTTGCAGTTCACTATGTGGCTAAATGGAGAGGGATCACCTTTATGACAAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGCCTTACGGATTTGATGTAGGGCAATCAGAACGAGGAACAGTCCTCAAGGGTTTGGATCTAGGTGTTCAAGGCATGAGGGTAGGAGGCCAGAGATTGCTTATAGTTCCTCCTGAGTTAGCTTACGGAAGCAAAGGGGTTCAAGAAATTCCTCCAAATGCAACAATAGAGTTGGATGTGGAATTGCTATCCATCAAGCAAAGTCCATTTGGAACTCCAGTAAAAATTGTTGAAGGTTAATAAACAAAACTGTTCTGATAGCGCGATATCTCAGTGATGTGGACTGGCAAAGATTGAAACTATGAAATTGGTGCTGAAGGGAAAAGCTTACCTGGTTTGAATTTGAATCTTCTTTATTCAGCAAGATATGTCCATTACCtttttatttaatatttaatttttattGAAATGTAAATTCATTCTCCCATCTTAATGAATATTACTTGTACTTTATGGAAAGCAA ATGGAGCTTTCTCTTCTTCTTCCTTCCTACAAACAAAACCCCACTATTTTCCACAAGCCCCTCAACCCCTCCGCCATTATCGGGAAGAGGCGGCCATCTCTTTTCCCTTGTCGATGCTCCTTGTCGTCTTCACAAGAAGAATCTTCAGAACAAGCTAAAGAATCGCTGGGGTGTGAGGGAAGAAGGGCATTGATTGGTTCTCTCCTGTCGACGGCTACTGGCATATATTTCTGCAATGTAGCCGAGGCTGTTAGCACAAGTAGAAGGGCTTTAAGAGCATCAAAAATACCTGAAAGTGAGTTTACAACTCTCCCGAATGGTCTGAAGTACTATGACTTGAAGGTTGGAGGAGGAACTAAGGCTGTGAATGGATCCCGTGTTGCAGTTCACTATGTGGCTAAATGGAGAGGGATCACCTTTATGACAAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGCCTTACGGATTTGATGTAGGGCAATCAGAACGAGGAACAGTCCTCAAGGGTTTGGATCTAGGTGTTCAAGGCATGAGGGTAGGAGGCCAGAGATTGCTTATAGTTCCTCCTGAGTTAGCTTACGGAAGCAAAGGGGTTCAAGAAATTCCTCCAAATGCAACAATAGAGTTGGATGTGGAATTGCTATCCATCAAGCAAAGTCCATTTGGAACTCCAGTAAAAATTGTTGAAGGTTAA MELSLLLPSYKQNPTIFHKPLNPSAIIGKRRPSLFPCRCSLSSSQEESSEQAKESLGCEGRRALIGSLLSTATGIYFCNVAEAVSTSRRALRASKIPESEFTTLPNGLKYYDLKVGGGTKAVNGSRVAVHYVAKWRGITFMTSRQGLGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGTPVKIVEG*
BLAST of Cucsa.378750 vs. Swiss-Prot
Match: FK164_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 8.5e-85 Identity = 163/219 (74.43%), Postives = 178/219 (81.28%), Query Frame = 1
BLAST of Cucsa.378750 vs. Swiss-Prot
Match: FKB18_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana GN=FKBP18 PE=1 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 7.3e-20 Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 1
BLAST of Cucsa.378750 vs. Swiss-Prot
Match: FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum GN=fkbp4 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18 Identity = 58/132 (43.94%), Postives = 77/132 (58.33%), Query Frame = 1
BLAST of Cucsa.378750 vs. Swiss-Prot
Match: FKBP4_RHIO9 (FK506-binding protein 4 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=FKBP4 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.1e-18 Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 1
BLAST of Cucsa.378750 vs. Swiss-Prot
Match: FKBP4_NEUCR (FK506-binding protein 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fkr-4 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.4e-17 Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 1
BLAST of Cucsa.378750 vs. TrEMBL
Match: A0A0A0LED4_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G748170 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 1.8e-126 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Cucsa.378750 vs. TrEMBL
Match: A0A061ETQ7_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_022370 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 5.9e-93 Identity = 181/235 (77.02%), Postives = 200/235 (85.11%), Query Frame = 1
BLAST of Cucsa.378750 vs. TrEMBL
Match: M5VRR6_PRUPE (Peptidyl-prolyl cis-trans isomerase OS=Prunus persica GN=PRUPE_ppa010848mg PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 6.5e-92 Identity = 177/235 (75.32%), Postives = 202/235 (85.96%), Query Frame = 1
BLAST of Cucsa.378750 vs. TrEMBL
Match: B9IFS9_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0016s10970g PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 8.5e-92 Identity = 183/238 (76.89%), Postives = 199/238 (83.61%), Query Frame = 1
BLAST of Cucsa.378750 vs. TrEMBL
Match: V4UV62_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10012638mg PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 2.3e-89 Identity = 177/235 (75.32%), Postives = 197/235 (83.83%), Query Frame = 1
BLAST of Cucsa.378750 vs. TAIR10
Match: AT3G10060.1 (AT3G10060.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 314.7 bits (805), Expect = 4.8e-86 Identity = 163/219 (74.43%), Postives = 178/219 (81.28%), Query Frame = 1
BLAST of Cucsa.378750 vs. TAIR10
Match: AT1G20810.1 (AT1G20810.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 99.0 bits (245), Expect = 4.1e-21 Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 1
BLAST of Cucsa.378750 vs. TAIR10
Match: AT5G05420.1 (AT5G05420.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15 Identity = 48/121 (39.67%), Postives = 69/121 (57.02%), Query Frame = 1
BLAST of Cucsa.378750 vs. TAIR10
Match: AT4G25340.1 (AT4G25340.1 FK506 BINDING PROTEIN 53) HSP 1 Score: 77.8 bits (190), Expect = 9.8e-15 Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 1
BLAST of Cucsa.378750 vs. TAIR10
Match: AT4G39710.1 (AT4G39710.1 FK506-binding protein 16-2) HSP 1 Score: 74.7 bits (182), Expect = 8.3e-14 Identity = 68/222 (30.63%), Postives = 95/222 (42.79%), Query Frame = 1
BLAST of Cucsa.378750 vs. NCBI nr
Match: gi|449440175|ref|XP_004137860.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Cucumis sativus]) HSP 1 Score: 459.9 bits (1182), Expect = 2.6e-126 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Cucsa.378750 vs. NCBI nr
Match: gi|659084216|ref|XP_008442773.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Cucumis melo]) HSP 1 Score: 439.5 bits (1129), Expect = 3.6e-120 Identity = 220/227 (96.92%), Postives = 223/227 (98.24%), Query Frame = 1
BLAST of Cucsa.378750 vs. NCBI nr
Match: gi|645272322|ref|XP_008241339.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Prunus mume]) HSP 1 Score: 350.1 bits (897), Expect = 2.9e-93 Identity = 179/235 (76.17%), Postives = 203/235 (86.38%), Query Frame = 1
BLAST of Cucsa.378750 vs. NCBI nr
Match: gi|658047828|ref|XP_008359604.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic-like isoform X2 [Malus domestica]) HSP 1 Score: 349.4 bits (895), Expect = 5.0e-93 Identity = 179/237 (75.53%), Postives = 202/237 (85.23%), Query Frame = 1
BLAST of Cucsa.378750 vs. NCBI nr
Match: gi|590631380|ref|XP_007027546.1| (FKBP-like peptidyl-prolyl cis-trans isomerase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 348.6 bits (893), Expect = 8.5e-93 Identity = 181/235 (77.02%), Postives = 200/235 (85.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |