Cucsa.375390 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.375390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCopia protein
Locationscaffold03746 : 420243 .. 421130 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCTTTGCTGTGAATGTTGTCAGCCAGTTTATGCAGACCCCTAATGAGGAACACATGAAAGCTGTCAAGAGAATTTTGAGATACTTAAAATCAACACCTAGTAAAGGGCTGATGTTTAGAAAAaCAGACAGAAAGACCATTGAGGCATACATTGACTCGAATTGGGCAGGATCTGCTGTTGACAGAAAGTCTACCTCGGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAATGTTGTGGCCAGGAGCAGCGCTGAGGCCGAATACAGAGCTATGAGTTTAGGAATATGTGAGGAAATTTGGCTTCAGAAAGTTTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTCTGTGATAATAAAACCGCTATTAGTATTGCTAACAACCCTGTTCAACATGATAGAACTAAACACGTTAAGATTGATCGGCATTTCATCAAAGAAAAACTTGACAGTGGGAGCATATGCATTCCGTACATCCCTTCGAGTCAACAAGTTGCTAATGTTCTTACCAAAGAGCTTCTCAGACCAAACTTCGACTTTTGCGTTAGCAAGTTGAGCCTCATTGATATTTACGTCCCAACTTGAGGGGgAGTGTTGGAATTCTTTCCTTTTTTCTAGGCTTTTTCCTAGTTAGTATCCTAGAATAATTATGGAAAGATTATGGGAATGTTTTCCTTATTTTCCTAAATCTTTtCCTTTTTTATTCCACTGTATACTCTATTTATTCTCCCTTGTACCTATTGTTTTATTCATTAGAAAATAATAACAACAAACAATCGTGGTTTTTCTCCCGGTACTCGGGTTTCCACGTAAATTGGTGTGAATTCGTTGTCTCTCCTTTCAATAGTTTTCA

mRNA sequence

tttcctttgctgtgaatgttgtcagccagtttatgcagacccctaatgaggaacacatgaaagctgtcaagagaattttgagatacttaaaatcaacacctagtaaagggctgatgtttagaaaaacagacagaaagaccattgaggcatacattgactcgaattgggcaggatctgctgttgacagaaagtctacctcgggttattgtacctttgtttggggcaatcttgtaacttggaggagtaagaagcaaaatgttgtggccaggagcagcgctgaggccgaatacagagctatgagtttaggaatatgtgaggaaatttggcttcagaaagttttgtcagatcttcatcaggaatgtgagacaccattgaagcttttctgtgataataaaaccgctattagtattgctaacaaccctgttcaacatgatagaactaaacacgttaagattgatcggcatttcatcaaagaaaaacttgacagtgggagcatatgcattccgtacatcccttcgagtcaacaagttgctaatgttcttaccaaagagcttctcagaccaaacttcgacttttgcgttagcaagttgagcctcattgatatttacgtcccaacttgagggggagtgttggaattctttccttttttctaggctttttcctagttagtatcctagaataattatggaaagattatgggaatgttttccttattttcctaaatcttttccttttttattccactgtatactctatttattctcccttgtacctattgttttattcattagaaaataataacaacaaacaatcgtggtttttctcccggtactcgggtttccacgtaaattggtgtgaattcgttgtctctcctttcaataGTTTTCA

Coding sequence (CDS)

ATGCAGACCCCTAATGAGGAACACATGAAAGCTGTCAAGAGAATTTTGAGATACTTAAAATCAACACCTAGTAAAGGGCTGATGTTTAGAAAAaCAGACAGAAAGACCATTGAGGCATACATTGACTCGAATTGGGCAGGATCTGCTGTTGACAGAAAGTCTACCTCGGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAATGTTGTGGCCAGGAGCAGCGCTGAGGCCGAATACAGAGCTATGAGTTTAGGAATATGTGAGGAAATTTGGCTTCAGAAAGTTTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTCTGTGATAATAAAACCGCTATTAGTATTGCTAACAACCCTGTTCAACATGATAGAACTAAACACGTTAAGATTGATCGGCATTTCATCAAAGAAAAACTTGACAGTGGGAGCATATGCATTCCGTACATCCCTTCGAGTCAACAAGTTGCTAATGTTCTTACCAAAGAGCTTCTCAGACCAAACTTCGACTTTTGCGTTAGCAAGTTGAGCCTCATTGATATTTACGTCCCAACTTGA

Protein sequence

MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCTFVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFDFCVSKLSLIDIYVPT*
Homology
[Close]
BLAST of Cucsa.375390 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 156.0 bits (393), Expect = 4.3e-37
Identity = 81/188 (43.09%), Postives = 119/188 (63.30%), Query Frame = 1 

Query: 5    NEEHMKAVKRILRYLKSTPSKGLMFRKT--DRKTIEAYIDSNWAGSAVDRKSTSGYCTFV 64
            N E  + +KR+LRYLK T    L+F+K       I  Y+DS+WAGS +DRKST+GY   +
Sbjct: 1214 NSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKM 1273

Query: 65   WG-NLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNK 124
            +  NL+ W +K+QN VA SS EAEY A+   + E +WL+ +L+ ++ + E P+K++ DN+
Sbjct: 1274 FDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQ 1333

Query: 125  TAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFDF 184
              ISIANNP  H R KH+ I  HF +E++ +  IC+ YIP+  Q+A++ TK L    F  
Sbjct: 1334 GCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVE 1393

Query: 185  CVSKLSLI 190
               KL L+
Sbjct: 1394 LRDKLGLL 1401

[Close]
BLAST of Cucsa.375390 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.2e-27
Identity = 68/184 (36.96%), Postives = 112/184 (60.87%), Query Frame = 1 

Query: 1    MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
            ++ P +EH +AVK ILRYL+ T    L F  +D   ++ Y D++ AG   +RKS++GY  
Sbjct: 1140 LENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYLF 1199

Query: 61   FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDL--HQECETPLKLFC 120
               G  ++W+SK Q  VA S+ EAEY A +    E IWL++ L +L  HQ+      ++C
Sbjct: 1200 TFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK---EYVVYC 1259

Query: 121  DNKTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPN 180
            D+++AI ++ N + H RTKH+ +  H+I+E +D  S+ +  I +++  A++LTK + R  
Sbjct: 1260 DSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNK 1319

Query: 181  FDFC 183
            F+ C
Sbjct: 1320 FELC 1319

[Close]
BLAST of Cucsa.375390 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.5e-18
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M  P       +KR+LRY+K T   GL   K  +  ++A+ DS+WAG    R+ST+G+CT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIW 99
           F+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Cucsa.375390 vs. TrEMBL
Match: A5AYJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.2e-76
Identity = 131/195 (67.18%), Postives = 169/195 (86.67%), Query Frame = 1 

Query: 1    MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
            M +P E H++AV RILRYLKSTP KGL F+K+++KTIEAY D++WAGS  DR+STSGYCT
Sbjct: 1311 MHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTDADWAGSVTDRRSTSGYCT 1370

Query: 61   FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            ++WGNLVTWRSKKQ+V ARSSAEAEYRAM+ G+CE +WL+K+L +L +  E P+KL+CDN
Sbjct: 1371 YIWGNLVTWRSKKQSVXARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKLYCDN 1430

Query: 121  KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
            K AISIA+NPVQHDRTKHV+IDRHFIKEKL++  IC+P++P++QQ+A++LTK L R +F+
Sbjct: 1431 KAAISIAHNPVQHDRTKHVEIDRHFIKEKLEASIICMPFVPTTQQIADILTKGLFRSSFE 1490

Query: 181  FCVSKLSLIDIYVPT 196
            F +SKL +IDIY PT
Sbjct: 1491 FLISKLGMIDIYAPT 1505

[Close]
BLAST of Cucsa.375390 vs. TrEMBL
Match: A5CAQ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017186 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.3e-74
Identity = 129/195 (66.15%), Postives = 167/195 (85.64%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M +P E H++AV RILRYLKSTP KGL F+K+ +KTIEAY D++WAG   DR+S+SGYCT
Sbjct: 714 MHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSKQKTIEAYTDADWAGLVTDRRSSSGYCT 773

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
           ++WGNLVTWRSKKQ+VVARSSAEAEYRAM+ G+CE +WL+K+L +L +  E P+KL+CDN
Sbjct: 774 YIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKLYCDN 833

Query: 121 KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
           K AISIA+NPVQHDRTKHV+IDRHFIKEKL++  IC+ ++P++QQ+A++LTK L R +F+
Sbjct: 834 KAAISIAHNPVQHDRTKHVEIDRHFIKEKLEASIICMSFVPTTQQIADILTKGLFRSSFE 893

Query: 181 FCVSKLSLIDIYVPT 196
           F +SKL +IDIY PT
Sbjct: 894 FLISKLGMIDIYAPT 908

[Close]
BLAST of Cucsa.375390 vs. TrEMBL
Match: A5BFS0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021511 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-73
Identity = 129/195 (66.15%), Postives = 166/195 (85.13%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M +P E H +AV RILRYLKSTP KGL F+K+++KTIEAY +++WAGS +DRKSTSGYCT
Sbjct: 297 MHSPYEVHFEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTNADWAGSVIDRKSTSGYCT 356

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
           ++WGNLVTWRSKKQ+VVARSSAEAEYRAM+ G+CE +WL+K+L +L    E P+KL+CDN
Sbjct: 357 YIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKIPLEMPMKLYCDN 416

Query: 121 KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
           K AISIA+NPVQHDRTKHV+IDRHFIK+KL++  IC+ +I ++QQ+ ++LTK L R +F+
Sbjct: 417 KAAISIAHNPVQHDRTKHVEIDRHFIKDKLEASIICMSFISTTQQIVDILTKGLFRSSFE 476

Query: 181 FCVSKLSLIDIYVPT 196
           F +SKL +IDIY PT
Sbjct: 477 FLISKLGMIDIYAPT 491

[Close]
BLAST of Cucsa.375390 vs. TrEMBL
Match: W9R7S4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026004 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-69
Identity = 127/196 (64.80%), Postives = 163/196 (83.16%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M +P EEH++A  RILRYLK++  KGL F K +++ IE Y D++WAGS +DR+STSGY T
Sbjct: 1   MHSPYEEHLEAAYRILRYLKNSLEKGLFFEKNEQRGIETYTDADWAGSTLDRRSTSGYYT 60

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
           FVWGNLVTWRSKKQN VARSSAEAEYR+M+ GICE IWL+++L +L +    P+KL+CDN
Sbjct: 61  FVWGNLVTWRSKKQNEVARSSAEAEYRSMAQGICEMIWLKRILEELRRPVIMPMKLYCDN 120

Query: 121 KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
           K AI+IA+NPVQHDRTKHV+IDRHFIKEK+++G+IC+P++P+SQQVA+VLTK L RPNF+
Sbjct: 121 KAAINIAHNPVQHDRTKHVEIDRHFIKEKIEAGAICMPFVPTSQQVADVLTKGLFRPNFE 180

Query: 181 FCVSK---LSLIDIYV 194
           F +SK    S + IYV
Sbjct: 181 FLISKEMFPSHVKIYV 196

[Close]
BLAST of Cucsa.375390 vs. TrEMBL
Match: A5B251_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014220 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-68
Identity = 124/195 (63.59%), Postives = 155/195 (79.49%), Query Frame = 1 

Query: 1    MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
            M +P EEHM+AV RILRYLK TP KGL FRKT+ +  E Y D++WAG+ +DR+STSGYC+
Sbjct: 918  MHSPTEEHMEAVYRILRYLKMTPGKGLFFRKTENRDTEVYSDADWAGNIIDRRSTSGYCS 977

Query: 61   FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQ+VVARSSAEAEYRA++ GICE IW+++VLS+L Q   +P+ + CDN
Sbjct: 978  FVWGNLVTWRSKKQSVVARSSAEAEYRALAQGICEGIWIKRVLSELGQTSSSPILMMCDN 1037

Query: 121  KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
            + AISIA NPV HDRTKHV+IDRHFI EK+ S ++ + Y+P+  Q A++LTK L RPNF+
Sbjct: 1038 QAAISIAKNPVHHDRTKHVEIDRHFITEKVTSETVKLNYVPTKHQTADILTKALPRPNFE 1097

Query: 181  FCVSKLSLIDIYVPT 196
                KL L DIY PT
Sbjct: 1098 DLTCKLGLYDIYSPT 1112

[Close]
BLAST of Cucsa.375390 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 131.3 bits (329), Expect = 6.3e-31
Identity = 61/148 (41.22%), Postives = 92/148 (62.16%), Query Frame = 1 

Query: 2   QTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCTF 61
           + P   H +AV +IL Y+K T  +GL +       ++ + D+++      R+ST+GYC F
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466

Query: 62  VWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNK 121
           +  +L++W+SKKQ VV++SSAEAEYRA+S    E +WL +   +L      P  LFCDN 
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526

Query: 122 TAISIANNPVQHDRTKHVKIDRHFIKEK 150
            AI IA N V H+RTKH++ D H ++E+
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRER 554

[Close]
BLAST of Cucsa.375390 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 4.3e-19
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M  P       +KR+LRY+K T   GL   K  +  ++A+ DS+WAG    R+ST+G+CT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIW 99
           F+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Cucsa.375390 vs. NCBI nr
Match: gi|147819777|emb|CAN76196.1| (hypothetical protein VITISV_041073 [Vitis vinifera])

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-76
Identity = 131/195 (67.18%), Postives = 169/195 (86.67%), Query Frame = 1 

Query: 1    MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
            M +P E H++AV RILRYLKSTP KGL F+K+++KTIEAY D++WAGS  DR+STSGYCT
Sbjct: 1311 MHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTDADWAGSVTDRRSTSGYCT 1370

Query: 61   FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            ++WGNLVTWRSKKQ+V ARSSAEAEYRAM+ G+CE +WL+K+L +L +  E P+KL+CDN
Sbjct: 1371 YIWGNLVTWRSKKQSVXARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKLYCDN 1430

Query: 121  KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
            K AISIA+NPVQHDRTKHV+IDRHFIKEKL++  IC+P++P++QQ+A++LTK L R +F+
Sbjct: 1431 KAAISIAHNPVQHDRTKHVEIDRHFIKEKLEASIICMPFVPTTQQIADILTKGLFRSSFE 1490

Query: 181  FCVSKLSLIDIYVPT 196
            F +SKL +IDIY PT
Sbjct: 1491 FLISKLGMIDIYAPT 1505

[Close]
BLAST of Cucsa.375390 vs. NCBI nr
Match: gi|147843633|emb|CAN79872.1| (hypothetical protein VITISV_017186 [Vitis vinifera])

HSP 1 Score: 286.6 bits (732), Expect = 3.3e-74
Identity = 129/195 (66.15%), Postives = 167/195 (85.64%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M +P E H++AV RILRYLKSTP KGL F+K+ +KTIEAY D++WAG   DR+S+SGYCT
Sbjct: 714 MHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSKQKTIEAYTDADWAGLVTDRRSSSGYCT 773

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
           ++WGNLVTWRSKKQ+VVARSSAEAEYRAM+ G+CE +WL+K+L +L +  E P+KL+CDN
Sbjct: 774 YIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKLYCDN 833

Query: 121 KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
           K AISIA+NPVQHDRTKHV+IDRHFIKEKL++  IC+ ++P++QQ+A++LTK L R +F+
Sbjct: 834 KAAISIAHNPVQHDRTKHVEIDRHFIKEKLEASIICMSFVPTTQQIADILTKGLFRSSFE 893

Query: 181 FCVSKLSLIDIYVPT 196
           F +SKL +IDIY PT
Sbjct: 894 FLISKLGMIDIYAPT 908

[Close]
BLAST of Cucsa.375390 vs. NCBI nr
Match: gi|147790213|emb|CAN65603.1| (hypothetical protein VITISV_021511 [Vitis vinifera])

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-73
Identity = 129/195 (66.15%), Postives = 166/195 (85.13%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M +P E H +AV RILRYLKSTP KGL F+K+++KTIEAY +++WAGS +DRKSTSGYCT
Sbjct: 297 MHSPYEVHFEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTNADWAGSVIDRKSTSGYCT 356

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
           ++WGNLVTWRSKKQ+VVARSSAEAEYRAM+ G+CE +WL+K+L +L    E P+KL+CDN
Sbjct: 357 YIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKIPLEMPMKLYCDN 416

Query: 121 KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
           K AISIA+NPVQHDRTKHV+IDRHFIK+KL++  IC+ +I ++QQ+ ++LTK L R +F+
Sbjct: 417 KAAISIAHNPVQHDRTKHVEIDRHFIKDKLEASIICMSFISTTQQIVDILTKGLFRSSFE 476

Query: 181 FCVSKLSLIDIYVPT 196
           F +SKL +IDIY PT
Sbjct: 477 FLISKLGMIDIYAPT 491

[Close]
BLAST of Cucsa.375390 vs. NCBI nr
Match: gi|985438243|ref|XP_015383511.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Citrus sinensis])

HSP 1 Score: 281.6 bits (719), Expect = 1.1e-72
Identity = 124/195 (63.59%), Postives = 164/195 (84.10%), Query Frame = 1 

Query: 1   MQTPNEEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCT 60
           M +P  EH++AV +ILRYLKSTP +GL+F+K+D++++E + D+NWAG   DR+STSGYCT
Sbjct: 193 MHSPYAEHLEAVHKILRYLKSTPGRGLLFKKSDQRSVEVFTDANWAGLVSDRRSTSGYCT 252

Query: 61  FVWGNLVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
           F+WGNL+TWRSKKQNVVARSS EAE+RAM+ G+CE +W+++VL +L  + E P++L CDN
Sbjct: 253 FLWGNLITWRSKKQNVVARSSTEAEFRAMANGVCEVLWIKRVLGELKLDIEAPMRLLCDN 312

Query: 121 KTAISIANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFD 180
           K+AISIANNPVQHDRTKH++IDRHFIKEKL++G IC+P+IPS QQ A+VLTK   RP F+
Sbjct: 313 KSAISIANNPVQHDRTKHIEIDRHFIKEKLENGVICMPFIPSEQQTADVLTKGHFRPKFE 372

Query: 181 FCVSKLSLIDIYVPT 196
             + KL +I+IY PT
Sbjct: 373 SFIDKLGMINIYAPT 387

[Close]
BLAST of Cucsa.375390 vs. NCBI nr
Match: gi|985429298|ref|XP_015384061.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107176296 [Citrus sinensis])

HSP 1 Score: 277.7 bits (709), Expect = 1.5e-71
Identity = 128/190 (67.37%), Postives = 159/190 (83.68%), Query Frame = 1 

Query: 6    EEHMKAVKRILRYLKSTPSKGLMFRKTDRKTIEAYIDSNWAGSAVDRKSTSGYCTFVWGN 65
            EEH++AV RILRYLKSTP KGL+FRKT+ + IE Y D++WAGS +DRKST+GYCTFVWGN
Sbjct: 1079 EEHLEAVYRILRYLKSTPGKGLLFRKTENRGIEVYTDADWAGSVIDRKSTTGYCTFVWGN 1138

Query: 66   LVTWRSKKQNVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKTAIS 125
            LVTWRSKKQNVVARS+AEAE+RAM+ GICE +WL++VL DL +    P++L+CDNK  IS
Sbjct: 1139 LVTWRSKKQNVVARSTAEAEFRAMAHGICEVLWLKQVLEDLRRPIVLPMRLYCDNKATIS 1198

Query: 126  IANNPVQHDRTKHVKIDRHFIKEKLDSGSICIPYIPSSQQVANVLTKELLRPNFDFCVSK 185
            IA+NPV HDRTKHV+IDRHFIKE L++  IC+ ++P+ QQ A++LTK LL+ NF   VSK
Sbjct: 1199 IAHNPVXHDRTKHVEIDRHFIKENLENKIICLLFVPTKQQTADILTKGLLKTNFGHLVSK 1258

Query: 186  LSLIDIYVPT 196
            L +IDIY PT
Sbjct: 1259 LGMIDIYAPT 1268

The following BLAST results are available for this feature:
BLAST of Cucsa.375390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COPIA_DROME4.3e-3743.09Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
POLX_TOBAC5.2e-2736.96Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
M810_ARATH7.5e-1841.84Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
BLAST of Cucsa.375390 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AYJ3_VITVI3.2e-7667.18Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1[more]
A5CAQ8_VITVI2.3e-7466.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017186 PE=4 SV=1[more]
A5BFS0_VITVI1.2e-7366.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021511 PE=4 SV=1[more]
W9R7S4_9ROSA1.3e-6964.80Uncharacterized protein OS=Morus notabilis GN=L484_026004 PE=4 SV=1[more]
A5B251_VITVI1.9e-6863.59Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014220 PE=4 SV=1[more]
BLAST of Cucsa.375390 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.16.3e-3141.22 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00810.14.3e-1941.84ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
BLAST of Cucsa.375390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|147819777|emb|CAN76196.1|4.7e-7667.18hypothetical protein VITISV_041073 [Vitis vinifera][more]
gi|147843633|emb|CAN79872.1|3.3e-7466.15hypothetical protein VITISV_017186 [Vitis vinifera][more]
gi|147790213|emb|CAN65603.1|1.7e-7366.15hypothetical protein VITISV_021511 [Vitis vinifera][more]
gi|985438243|ref|XP_015383511.1|1.1e-7263.59PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Citrus sinensis... [more]
gi|985429298|ref|XP_015384061.1|1.5e-7167.37PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107176296 [Citrus sin... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0016310 phosphorylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016301 kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.375390.1Cucsa.375390.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..114
score: 1.5
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 1..114
score: 1.5
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 4..142
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.375390Silver-seed gourdcarcgyB0586
Cucsa.375390Silver-seed gourdcarcgyB0866
Cucsa.375390Cucumber (Chinese Long) v3cgycucB569
Cucsa.375390Watermelon (97103) v2cgywmbB644
Cucsa.375390Wax gourdcgywgoB750
Cucsa.375390Cucurbita maxima (Rimu)cgycmaB1034
Cucsa.375390Cucurbita maxima (Rimu)cgycmaB1035
Cucsa.375390Cucurbita moschata (Rifu)cgycmoB1033
Cucsa.375390Cucurbita moschata (Rifu)cgycmoB1034
Cucsa.375390Wild cucumber (PI 183967)cgycpiB554
Cucsa.375390Cucumber (Chinese Long) v2cgycuB525
Cucsa.375390Melon (DHL92) v3.5.1cgymeB609
Cucsa.375390Watermelon (Charleston Gray)cgywcgB640
Cucsa.375390Watermelon (97103) v1cgywmB677
Cucsa.375390Cucurbita pepo (Zucchini)cgycpeB0989
Cucsa.375390Cucurbita pepo (Zucchini)cgycpeB0990
Cucsa.375390Bottle gourd (USVL1VR-Ls)cgylsiB607
Cucsa.375390Melon (DHL92) v3.6.1cgymedB606