Cucsa.374760 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTGTTGGCTGTGCAGACCCATTTCTGAAGATGAATGGCTGTTTGAGGAGAAAAATATTGAAGGAAAATGCTCCAGAGAGATGTCGGCGTTTTGTGAGCATTCCAACTCTTCCTCTTCCATACTCACTACATCAGATGCATCCTCCCATACTCCACCGCTGGAACGCTTACTGTTCTCTACTTCTCCTTGTCGCCACCAGCTAAAGCTTAATGTAATGCTTCACATTCTTACATCTCTTACTTAATTTCTGCTTCTTCTATGTTGCTTGTTTCTGCTTCTTCTATGTTGTTTGTTTTCACTAGCTGTTTTATGCTCTGTTTTTGTGTGTGCGGGTTTCCATATGTGTGCGATGGGTGCCTTAGTTTGAGTATATGAACACTTGATTTGGTATGTGCGATCTGTGCGATTACCAATTTTTTTTTATTATTTGCATTAATTTCTGGATGAGTTGAATTTAATCGTATTCTGTTGCTAAGACTGGGAAACGTACTGCTGGTACCCGAATTTAGTATGTGTTCGATAATGTTTGGTTTATTATTTACTTTTACTGCCGATGTATGGCTATCGGATCCTTCTTGTTGTTTCTTTTTCAATATGAACTTCAATCTGATCCGAATCTAGAAAACTCTATTTCCTTCTCATGATTACTTACCTATCTGTCACTGTTCTTCAATTGCTTGAATTTCAACTCCCAATAATTCGATCGATGAAGCTTTTAGTGGCTAATTTAGGAAATACTTCGTTGATTTTGAGTGCGTAACTCTTTAAAGTCTAATGAATTCCACACAGGTCGTGAGAAAGAGTCGTTCGAAGTTAGTAAGGATTTCCGAGAACCGGAATCTAAGTTCTACAGACGAAGTGACCTTGTCTTCAGGTTCGGCGTCCTCGGAGACGACTTCTTGTTTGTCAAGCAGTTCAAGCGTGGTCACAAGCACGCCGATCCATCGCCTGGTTACGAGAGCAGAGAAGAAATTAGAAATGATTCGTCATGCATGGAGGAAAAAGCAGATCGCATCGGCGCACATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGATGGCTGTTCGTCAGAGGTGAAGATACGGAAAGTGATTGGTGACAGTCCTGACACAAGCAAAGCTCTCAGAATGTAATTACTAATTCAGTCTTCTCTCTCCCAAACTCATCACCACCTTCCCTCTAAACTCATGCTTTTATCCAATGCCTCCAATTCTCACACATTTACTCTTTCACGGTAGGATCGTCTACGCCTTTGCATTACTCTCATCATCATAATTTTATACGATAAAGGTTTAAACATAGAAATTGGGAATGAATTTAATTCGTTCACATGTAGATCCATACTTCTTTTCAAGCTTAAGGATTGGTTAAGATCAGATCAGTCTTATGTTAATGCAAATGATTTTGGGCTCTGTTTTTCCCTTCTTGTGCAGACTGTTGAAATTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAGGATCCCTATATGTACAAGGTAAAACACGCTCTCAAACGTAATTCACGGCTTTATAAAGCAACCAAGTCCAACAAAACCCATTAGTTTGCATAGAAAATTGAACATGTTTGCTTTTCTTTCCATTTTCCCTTTTTTGCAGATTGCTTGA TGTTTGTTGGCTGTGCAGACCCATTTCTGAAGATGAATGGCTGTTTGAGGAGAAAAATATTGAAGGAAAATGCTCCAGAGAGATGTCGGCGTTTTGTGAGCATTCCAACTCTTCCTCTTCCATACTCACTACATCAGATGCATCCTCCCATACTCCACCGCTGGAACGCTTACTGTTCTCTACTTCTCCTTGTCGCCACCAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAAGTTAGTAAGGATTTCCGAGAACCGGAATCTAAGTTCTACAGACGAAGTGACCTTGTCTTCAGGTTCGGCGTCCTCGGAGACGACTTCTTGTTTGTCAAGCAGTTCAAGCGTGGTCACAAGCACGCCGATCCATCGCCTGGTTACGAGAGCAGAGAAGAAATTAGAAATGATTCGTCATGCATGGAGGAAAAAGCAGATCGCATCGGCGCACATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGATGGCTGTTCGTCAGAGGTGAAGATACGGAAAGTGATTGGTGACAGTCCTGACACAAGCAAAGCTCTCAGAATACTGTTGAAATTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAGGATCCCTATATGTACAAGATTGCTTGA ATGTCGGCGTTTTGTGAGCATTCCAACTCTTCCTCTTCCATACTCACTACATCAGATGCATCCTCCCATACTCCACCGCTGGAACGCTTACTGTTCTCTACTTCTCCTTGTCGCCACCAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAAGTTAGTAAGGATTTCCGAGAACCGGAATCTAAGTTCTACAGACGAAGTGACCTTGTCTTCAGGTTCGGCGTCCTCGGAGACGACTTCTTGTTTGTCAAGCAGTTCAAGCGTGGTCACAAGCACGCCGATCCATCGCCTGGTTACGAGAGCAGAGAAGAAATTAGAAATGATTCGTCATGCATGGAGGAAAAAGCAGATCGCATCGGCGCACATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGATGGCTGTTCGTCAGAGGTGAAGATACGGAAAGTGATTGGTGACAGTCCTGACACAAGCAAAGCTCTCAGAATACTGTTGAAATTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAGGATCCCTATATGTACAAGATTGCTTGA MSAFCEHSNSSSSILTTSDASSHTPPLERLLFSTSPCRHQLKLNVVRKSRSKLVRISENRNLSSTDEVTLSSGSASSETTSCLSSSSSVVTSTPIHRLVTRAEKKLEMIRHAWRKKQIASAHMRRRAEAILSYLSDGCSSEVKIRKVIGDSPDTSKALRILLKLEEIKRSGTGGRQDPYMYKIA*
BLAST of Cucsa.374760 vs. TrEMBL
Match: A0A0A0L130_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G165910 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 3.8e-95 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of Cucsa.374760 vs. TrEMBL
Match: A0A061F408_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024640 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 7.1e-33 Identity = 89/176 (50.57%), Postives = 117/176 (66.48%), Query Frame = 1
BLAST of Cucsa.374760 vs. TrEMBL
Match: A0A0D2TS90_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G360400 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31 Identity = 88/177 (49.72%), Postives = 119/177 (67.23%), Query Frame = 1
BLAST of Cucsa.374760 vs. TrEMBL
Match: A0A067DGW7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0380632mg PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.8e-28 Identity = 85/179 (47.49%), Postives = 116/179 (64.80%), Query Frame = 1
BLAST of Cucsa.374760 vs. TrEMBL
Match: V4S742_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005740mg PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27 Identity = 82/183 (44.81%), Postives = 119/183 (65.03%), Query Frame = 1
BLAST of Cucsa.374760 vs. TAIR10
Match: AT3G57440.1 (AT3G57440.1 unknown protein) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24 Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = 1
BLAST of Cucsa.374760 vs. NCBI nr
Match: gi|449463366|ref|XP_004149405.1| (PREDICTED: uncharacterized protein LOC101216264 [Cucumis sativus]) HSP 1 Score: 355.5 bits (911), Expect = 5.5e-95 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of Cucsa.374760 vs. NCBI nr
Match: gi|659121677|ref|XP_008460771.1| (PREDICTED: uncharacterized protein LOC103499533 [Cucumis melo]) HSP 1 Score: 339.0 bits (868), Expect = 5.3e-90 Identity = 175/184 (95.11%), Postives = 180/184 (97.83%), Query Frame = 1
BLAST of Cucsa.374760 vs. NCBI nr
Match: gi|590635902|ref|XP_007028737.1| (Uncharacterized protein TCM_024640 [Theobroma cacao]) HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32 Identity = 89/176 (50.57%), Postives = 117/176 (66.48%), Query Frame = 1
BLAST of Cucsa.374760 vs. NCBI nr
Match: gi|823181851|ref|XP_012488320.1| (PREDICTED: uncharacterized protein LOC105801655 [Gossypium raimondii]) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 1
BLAST of Cucsa.374760 vs. NCBI nr
Match: gi|731399880|ref|XP_010653777.1| (PREDICTED: uncharacterized protein LOC104880103 [Vitis vinifera]) HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31 Identity = 91/185 (49.19%), Postives = 118/185 (63.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |