Cucsa.374720 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.374720
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	scaffold03735 : 201626 .. 204159 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTATTGATTTGATACCCGACTCATCTCTTCCCAACCTTCCTCATTACAGAATAAGTCCTAAGGAGTATGAGTTCTTACACCAACACATTGAAGATTTGTTGAAAAAAGGACATATTCAGCCGAGTATCAACCCTTGTGCTGTACCAGCTCTATTAACTCCAAAGAAGGATGGTAGCTGGAGGATGTGTGCAGATAGCCGAGCTATCAATAAAATCACTGTCAAGTATCGCTTCCCTATTCCAAGAATTAATGATCTCCTTGATCAACTTGGAGGAGCTCTTGTTTTTTCAAAGGTAGACCTAAGCAGTGGATATCGTCAAATTAGAATTAAGGTCAGGAGATGAGTGGAAGACGGCCTTCAAGACTTATGAGGGGTTATTCAAATGGTTACTGATGCCCTTTGGCTTGTCAAATGCCCCAAGTACCTTTATGTGGTTGATACACCATGTGCTACATTTATTCTTGAACAAATTCGTGGCAGTCTACTTTGATGATATCTTAATCTATAGCAAGAACGAACATGACCATATGCAGCACCTAAAGCTAGTTTTTGAAGCCCTTCAAAGGAGTAAGTTGTTCATTAATTTGAATAAATGTATTTTCTGCACCGAAGAAATATCTTTCCTAGGCTTTATTATATCTGAAAATCAAGTGAAGAGGGACGAAAGCAAGGTCGGAGCTGCAACTAAATAGCCTATTCCTAAATCAGTAAAGGAGAGTCAAGCTTTTATGGGGCTGGCTTCTTTTTACAAAAAGTTTATCAAGAACTTTAGTTCTATAACAGCTCCTATGACTGATTGTTTGAAGAAGGGAGCCTTTTATTGGGAAGAAAAACAGCAACACAATTTTTGACTCCCTAAAAAGAAAGCTTGCCAGCCAACCAGTCCTCAAATTACCGGAGTCTGACAGCCCTTGTAGACGCCAATGGAGTGGGAATTGGTGCTGTCCTTTCCAAGGAGGTCATCCAGTAGAATCCTTTAGTGAAAATTTGAGTAGTCCTTCTAGGCAAAACTGGAGCACATACGGGTAGGAACTTTATGCACTTGTTAGGGCCTTAAAACAGTGGGAGCACTTATTATCCAAGGAGTTTGTGCTGCTCACTGATCATTTCTCCTTGAAGTATCTCCAAGCCCAAAAAACATTAACAAGATGCATGCTAGATGGATATCTTATATCCAAAGATTTGATTTCTTAATCAAGTATCAAGCGGGCAAAGAATACATAGTTGCTGATGCCTTCAGCAGAAAAGGGACTCTCCTAACTGTGCTCTCAGCTGAAATTACAGCCTTTAACCATCTTCCAAAGCTATATGAGAATGATAAAGACTTTGGTGAGATTTGGAGTTATTGTACTGCACATATCCATGATATAGATTATCATTTGGTGGAAGGTTTTCTCTCAAAGGAGATCAATTATGCATTCCCCATACTTCTTCAGGGAAGCCCTAATAAAAGAAGCTCATTTGAGAGGTCTAGCTGGACACTTCGGTCAAGAAAAGACTTTTCAAATTGTCATCAAGAGGTTTTGTTGGCCTCAAGCTAGAAGAGACAATAAATTTGTGAAAGGATGTCCTATTTGCCAAAAAGAAAAAGGATCTTCATCTAATGCCAGTCTCTACACTTCTCTATCGATTCCTAAGAACATATGGGAGGATTTGCCAATTGAATTCGTAGTGGGTCTACCTAAGACTCAAAGGGGATTCGACTCGGTCATGGTTGTGGCGGATAGATTCAGCAAGATGTCTCATTTCTTGCCTTGTAAAAAAATCATAGACGCGGTGCACATTGCCACTCCTTTCTTTAGAGAGATTGTTAGACTACATGGCATTCCAAAAACAATAGTTTCTGATCGAGAAACTAACTTCCTTAGCCATTTTTGGAAGACACTATGGAAGAAGTTTGACACCACCTTGAAGTTTAGTACCACTGCTCATCCACAAACTGAGGTAACTAACCGATCCTTGGGAAATCTAATTTGCTACCTTAGTGGAAACCACCCTAGACAATGTGACATGGTTCTACCACAAGCTGAATTTGCTTTTAACAATATGATGAATAGAACTACGGGCAAATGCCCCTTTGAGATTGTGTACACCAAGGCACCAAGGTTGACATTCGACCTAACTAGCCTTCCTAAAGAAGTAGAAATCCAAGAAGCTGTGAACAGTTTGCTGAAAGAAAACAGAAACTTCACACAGAAGTGACCATATCACTAAGACTACCGAGTCTTACAAAGAAGAGAAGAATAAGAAGAGAAGGGAAGTACATTTTCAAGTTGGAGATCTTGCAATGGCACATTTGAAGAAGAAGAGGTTCCCCATTGGAACTTGTGGAAAGCTGAAAGACAAACAGATTGGCCCATGTCGAATACTTGATAAATATAAGCCAAATGCTTACAACATTGAACTGCCTCACGGGTTTAACATCAATCCAATCTTCAATGTAGCAGACCTTAGAAGCTACAATGCACCAGATGAATTCCACCTTTCATAATAAACTCGGGACAAGTTTGATGTTAGGGGGGTGGAATG

mRNA sequence

cacattattgatttgatacccgactcatctcttcccaaccttcctcattacagaataagtcctaaggagtatgagttcttacaccaacacattgaagatttgttgaaaaaaggacatattcagccgagtatcaacccttgtgctgtaccagctctattaactccaaagaaggatggtagctggaggatgtgtgcagatagccgagctatcaataaaatcactgtcaagtatcgcttccctattccaagaattaatgatctccttgatcaacttggaggagctcttgttttttcaaaggtagacctaagcagagatgagtggaagacggccttcaagacttatgaggggttattcaaatggttactgatgccctttggcttgtcaaatgccccaagtacctttatgtggttgatacaccatgtgctacatttattcttgaacaaattcgtggcagtctactttgatgatatcttaatctatagcaagaacgaacatgaccatatgcagcacctaaagctagtttttgaagcccttcaaaggagtaagttgttcattaatttgaataaatgtattttctgcaccgaagaaatatctttcctaggctttattatatcTGAAAATCAAGTGAAGAgggacgaaagcaagaaaaacagcaacacaatttttgactccctaaaaagaaagcttgccagccaaccagtcctcaaattaccggagtctgacagcccttgtagacgccaatggagtgggaattggtgctgtcctttccaaggaggtcatccagtagaatcctttagtgaaaatttgagtagtccttctaggcaaaactggagcacatacggatggatatcttatatccaaagatttgatttcttaatcaagtatcaagcgggcaaagaatacatagttgctgatgccttcagcagaaaagggactctcctaactgtgctctcagctgaaattacagcctttaaccatcttccaaagctatatgagaatgataaagactttggtgagatttggagttattgtactgcacatatccatgatatagattatcatttggtggaagccctaataaaagaagctcatttgagaggtctagctggacacttcggtcaagaaaagacttttcaaattgtcatcaagaggttttgttggcctcaagctagaagagacaataaatttgtgaaaggatgtcctatttgccaaaaagaaaaaggatcttcatctaatgccagtctctacacttctctatcgattcctaagaacatatgggaggatttgccaattgaattcgtagtgggtctacctaagactcaaaggggattcgactcggtcatggttgtggcggatagattcagcaagatgtctcatttcttgccttgtaaaaaaatcatagacgcggtgcacattgccactcctttctttagagagattgttagactacatggcattccaaaaacaatagtttctgatcgagaaactaacttccttagccatttttggaagacactatggaagaagtttgacaccaccttgaagtttagtaccactgctcatccacaaactgaggtaactaaccgatccttgggaaatctaatttgctaccttagtggaaaccaccctagacaatgtgacatggttctaccacaagctgaatttgcttttaacaatatgatgaatagaactacgggcaaatgcccctttgagattgtgtacaccaaggcaccaaggttgacattcgacctaactagccttcctaaagaagtagaaatccaagaagctactaccgagtcttacaaagaagagaagaataagaagagaagggaagtacattttcaagttggagatcttgcaatggcacatttgaagaagaagaggttccccattggaacttgtggaaagctgaaagacaaacaGATTGGCCCATGTCGAATACTTGATAAATATAAGCCAAATGCTTACAACATTGAACTGCCTCACGGGTTTAACATCAATCCAATCTTCAATGTAGCAGACCTTAGAAGCTACAAtgcaccagatgaattccacctttcataataaactcgggacaagtttgatgttaggggggtggaatg

Coding sequence (CDS)

ATGTGTGCAGATAGCCGAGCTATCAATAAAATCACTGTCAAGTATCGCTTCCCTATTCCAAGAATTAATGATCTCCTTGATCAACTTGGAGGAGCTCTTGTTTTTTCAAAGGTAGACCTAAGCAGAGATGAGTGGAAGACGGCCTTCAAGACTTATGAGGGGTTATTCAAATGGTTACTGATGCCCTTTGGCTTGTCAAATGCCCCAAGTACCTTTATGTGGTTGATACACCATGTGCTACATTTATTCTTGAACAAATTCGTGGCAGTCTACTTTGATGATATCTTAATCTATAGCAAGAACGAACATGACCATATGCAGCACCTAAAGCTAGTTTTTGAAGCCCTTCAAAGGAGTAAGTTGTTCATTAATTTGAATAAATGTATTTTCTGCACCGAAGAAATATCTTTCCTAGGCTTTATTATATCTGAAAATCAAGTGAAGAGGGACGAAAGCAAGAAAAACAGCAACACAATTTTTGACTCCCTAAAAAGAAAGCTTGCCAGCCAACCAGTCCTCAAATTACCGGAGTCTGACAGCCCTTGTAGACGCCAATGGAGTGGGAATTGGTGCTGTCCTTTCCAAGGAGGTCATCCAGTAGAATCCTTTAGTGAAAATTTGAGTAGTCCTTCTAGGCAAAACTGGAGCACATACGGATGGATATCTTATATCCAAAGATTTGATTTCTTAATCAAGTATCAAGCGGGCAAAGAATACATAGTTGCTGATGCCTTCAGCAGAAAAGGGACTCTCCTAACTGTGCTCTCAGCTGAAATTACAGCCTTTAACCATCTTCCAAAGCTATATGAGAATGATAAAGACTTTGGTGAGATTTGGAGTTATTGTACTGCACATATCCATGATATAGATTATCATTTGGTGGAAGCCCTAATAAAAGAAGCTCATTTGAGAGGTCTAGCTGGACACTTCGGTCAAGAAAAGACTTTTCAAATTGTCATCAAGAGGTTTTGTTGGCCTCAAGCTAGAAGAGACAATAAATTTGTGAAAGGATGTCCTATTTGCCAAAAAGAAAAAGGATCTTCATCTAATGCCAGTCTCTACACTTCTCTATCGATTCCTAAGAACATATGGGAGGATTTGCCAATTGAATTCGTAGTGGGTCTACCTAAGACTCAAAGGGGATTCGACTCGGTCATGGTTGTGGCGGATAGATTCAGCAAGATGTCTCATTTCTTGCCTTGTAAAAAAATCATAGACGCGGTGCACATTGCCACTCCTTTCTTTAGAGAGATTGTTAGACTACATGGCATTCCAAAAACAATAGTTTCTGATCGAGAAACTAACTTCCTTAGCCATTTTTGGAAGACACTATGGAAGAAGTTTGACACCACCTTGAAGTTTAGTACCACTGCTCATCCACAAACTGAGGTAACTAACCGATCCTTGGGAAATCTAATTTGCTACCTTAGTGGAAACCACCCTAGACAATGTGACATGGTTCTACCACAAGCTGAATTTGCTTTTAACAATATGATGAATAGAACTACGGGCAAATGCCCCTTTGAGATTGTGTACACCAAGGCACCAAGGTTGACATTCGACCTAACTAGCCTTCCTAAAGAAGTAGAAATCCAAGAAGCTACTACCGAGTCTTACAAAGAAGAGAAGAATAAGAAGAGAAGGGAAGTACATTTTCAAGTTGGAGATCTTGCAATGGCACATTTGAAGAAGAAGAGGTTCCCCATTGGAACTTGTGGAAAGCTGAAAGACAAACAGATTGGCCCATGTCGAATACTTGATAAATATAAGCCAAATGCTTACAACATTGAACTGCCTCACGGGTTTAACATCAATCCAATCTTCAATGTAGCAGACCTTAGAAGCTACAATGCACCAGATGAATTCCACCTTTCATAA

Protein sequence

MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSRDEWKTAFKTYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLKLVFEALQRSKLFINLNKCIFCTEEISFLGFIISENQVKRDESKKNSNTIFDSLKRKLASQPVLKLPESDSPCRRQWSGNWCCPFQGGHPVESFSENLSSPSRQNWSTYGWISYIQRFDFLIKYQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYCTAHIHDIDYHLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCWPQARRDNKFVKGCPICQKEKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHPQTEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLTFDLTSLPKEVEIQEATTESYKEEKNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAYNIELPHGFNINPIFNVADLRSYNAPDEFHLS*

Homology

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BLAST of Cucsa.374720 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 145.6 bits (366), Expect = 1.8e-33
Identity = 107/395 (27.09%), Postives = 175/395 (44.30%), Query Frame = 1


Query: 254  VLSAEITAFNHLPKLYENDKDFGEIWSYCTAHIHDIDYHLVEALIKEAHLRG------LA 313
            V   +++AF    K  E  + F + +S     I+  D  +V    + A +R         
Sbjct: 1051 VTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRLYHDHTLFG 1110

Query: 314  GHFGQEKTFQIVIKRFCWPQARRDN-KFVKGCPICQKEKGSSSNA-SLYTSLSIPKNIWE 373
            GHFG   T   +   + WP+ +    ++++ C  CQ  K        L   L I +  W 
Sbjct: 1111 GHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWL 1170

Query: 374  DLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIP 433
            D+ ++FV GLP T    + ++VV DRFSK +HF+  +K +DA  +    FR I   HG P
Sbjct: 1171 DISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFP 1230

Query: 434  KTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHPQT----EVTNRSLGNLICYLSGNHP 493
            +TI SDR+    +  ++ L K+       S+  HPQT    E T ++L  L+   +  + 
Sbjct: 1231 RTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNI 1290

Query: 494  RQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRL------------TFDLTSLPKEV 553
            +   + LPQ EF +N+   RT GK PFEI     P              +F    L K +
Sbjct: 1291 QNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHL 1350

Query: 554  EIQEATTESYKEE--------KNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIG 613
            +     T+   E          N++R+ +   +GD  + H +   F  G   K++   +G
Sbjct: 1351 KALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH-RDAYFKKGAYMKVQQIYVG 1410

Query: 614  PCRILDKYKPNAYNIELPHGFNINPIFNVADLRSY 617
            P R++ K   NAY ++L      + + NV  L+ +
Sbjct: 1411 PFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKF 1444

HSP 2 Score: 120.6 bits (301), Expect = 6.3e-26
Identity = 63/158 (39.87%), Postives = 95/158 (60.13%), Query Frame = 1


Query: 1   MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLS----------RDEWKTAFK 60
           +C D R +NK T+   FP+PRI++LL ++G A +F+ +DL           +D +KTAF 
Sbjct: 648 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 707

Query: 61  TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLN-KFVAVYFDDILIYSKNEHDHMQHL 120
           T  G +++ +MPFGL NAPSTF     ++   F + +FV VY DDILI+S++  +H +HL
Sbjct: 708 TPSGKYEYTVMPFGLVNAPSTFA---RYMADTFRDLRFVNVYLDDILIFSESPEEHWKHL 767

Query: 121 KLVFEALQRSKLFINLNKCIFCTEEISFLGFIISENQV 148
             V E L+   L +   KC F +EE  FLG+ I   ++
Sbjct: 768 DTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKI 802

[Close]

BLAST of Cucsa.374720 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 3.1e-33
Identity = 108/394 (27.41%), Postives = 174/394 (44.16%), Query Frame = 1


Query: 254  VLSAEITAFNHLPKLYENDKDFGEIWSYCTAHIHDIDYHLVEALIKEAHLRG------LA 313
            V   +++AF    K  E  + F + +S     I+  D  +V    + A +R         
Sbjct: 1077 VTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRLYHDHTLFG 1136

Query: 314  GHFGQEKTFQIVIKRFCWPQARRDN-KFVKGCPICQKEKGSSSNA-SLYTSLSIPKNIWE 373
            GHFG   T   +   + WP+ +    ++++ C  CQ  K        L   L I +  W 
Sbjct: 1137 GHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWL 1196

Query: 374  DLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIP 433
            D+ ++FV GLP T    + ++VV DRFSK +HF+  +K +DA  +    FR I   HG P
Sbjct: 1197 DISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFP 1256

Query: 434  KTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHPQT----EVTNRSLGNLICYLSGNHP 493
            +TI SDR+    +  ++ L K+       S+  HPQT    E T ++L  L+      + 
Sbjct: 1257 RTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNI 1316

Query: 494  RQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRL------------TFDLTSLPKEV 553
            +   + LPQ EF +N+   RT GK PFEI     P              +F    L K +
Sbjct: 1317 QNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHL 1376

Query: 554  EIQEATTESYKEE--------KNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIG 613
            +     T+   E          N++R+ +   +GD  + H +   F  G   K++   +G
Sbjct: 1377 KALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH-RDAYFKKGAYMKVQQIYVG 1436

Query: 614  PCRILDKYKPNAYNIELPHGFNINPIFNVADLRS 616
            P R++ K   NAY ++L      + + NV  L+S
Sbjct: 1437 PFRVVKKINDNAYELDLNSHKKKHRVINVQFLKS 1469

HSP 2 Score: 120.6 bits (301), Expect = 6.3e-26
Identity = 63/158 (39.87%), Postives = 95/158 (60.13%), Query Frame = 1


Query: 1   MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLS----------RDEWKTAFK 60
           +C D R +NK T+   FP+PRI++LL ++G A +F+ +DL           +D +KTAF 
Sbjct: 674 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 733

Query: 61  TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLN-KFVAVYFDDILIYSKNEHDHMQHL 120
           T  G +++ +MPFGL NAPSTF     ++   F + +FV VY DDILI+S++  +H +HL
Sbjct: 734 TPSGKYEYTVMPFGLVNAPSTFA---RYMADTFRDLRFVNVYLDDILIFSESPEEHWKHL 793

Query: 121 KLVFEALQRSKLFINLNKCIFCTEEISFLGFIISENQV 148
             V E L+   L +   KC F +EE  FLG+ I   ++
Sbjct: 794 DTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKI 828

[Close]

BLAST of Cucsa.374720 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.5e-30
Identity = 105/360 (29.17%), Postives = 167/360 (46.39%), Query Frame = 1


Query: 290  DYHLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCWPQARRD-NKFVKGCPICQKEKGSS 349
            D  L   +IK+ H  G   H G E    I+++RF W   R+   ++V+ C  CQ  K  S
Sbjct: 908  DTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK--S 967

Query: 350  SNASLYTSLS-IP--KNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKII 409
             N   Y  L  IP  +  WE L ++F+  LP++  G++++ VV DRFSKM+  +PC K I
Sbjct: 968  RNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSI 1027

Query: 410  DAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHP----Q 469
             A   A  F + ++   G PK I++D +  F S  WK    K++  +KFS    P    Q
Sbjct: 1028 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1087

Query: 470  TEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLT-F 529
            TE TN+++  L+  +   HP      +   + ++NN ++  T   PFEIV+  +P L+  
Sbjct: 1088 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1147

Query: 530  DLTSLPKEVEIQEATT----ESYKEEKN------KKRREVHFQ-VGDLAMAHLKKKRFP- 589
            +L S   + +     T    ++ KE  N      KK  ++  Q + +     L   +   
Sbjct: 1148 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1207

Query: 590  ---IGTCGKLKDKQIGPCRILDKYKPNAYNIELPHGFN--INPIFNVADLRSYNAPDEFH 624
               +    KL     GP  +L K  PN Y ++LP       +  F+V+ L  Y    E +
Sbjct: 1208 TGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELN 1264

HSP 2 Score: 110.9 bits (276), Expect = 5.0e-23
Identity = 57/154 (37.01%), Postives = 91/154 (59.09%), Query Frame = 1


Query: 1   MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
           M  D + +NK      +P+P I  LL ++ G+ +F+K+DL            DE K AF+
Sbjct: 464 MVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

Query: 61  TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
              G+F++L+MP+G+S AP+ F + I+ +L       V  Y DDILI+SK+E +H++H+K
Sbjct: 524 CPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVK 583

Query: 121 LVFEALQRSKLFINLNKCIFCTEEISFLGFIISE 145
            V + L+ + L IN  KC F   ++ F+G+ ISE
Sbjct: 584 DVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617

[Close]

BLAST of Cucsa.374720 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.5e-30
Identity = 105/360 (29.17%), Postives = 167/360 (46.39%), Query Frame = 1


Query: 290  DYHLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCWPQARRD-NKFVKGCPICQKEKGSS 349
            D  L   +IK+ H  G   H G E    I+++RF W   R+   ++V+ C  CQ  K  S
Sbjct: 908  DTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK--S 967

Query: 350  SNASLYTSLS-IP--KNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKII 409
             N   Y  L  IP  +  WE L ++F+  LP++  G++++ VV DRFSKM+  +PC K I
Sbjct: 968  RNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSI 1027

Query: 410  DAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHP----Q 469
             A   A  F + ++   G PK I++D +  F S  WK    K++  +KFS    P    Q
Sbjct: 1028 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1087

Query: 470  TEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLT-F 529
            TE TN+++  L+  +   HP      +   + ++NN ++  T   PFEIV+  +P L+  
Sbjct: 1088 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1147

Query: 530  DLTSLPKEVEIQEATT----ESYKEEKN------KKRREVHFQ-VGDLAMAHLKKKRFP- 589
            +L S   + +     T    ++ KE  N      KK  ++  Q + +     L   +   
Sbjct: 1148 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1207

Query: 590  ---IGTCGKLKDKQIGPCRILDKYKPNAYNIELPHGFN--INPIFNVADLRSYNAPDEFH 624
               +    KL     GP  +L K  PN Y ++LP       +  F+V+ L  Y    E +
Sbjct: 1208 TGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELN 1264

HSP 2 Score: 108.2 bits (269), Expect = 3.2e-22
Identity = 56/154 (36.36%), Postives = 91/154 (59.09%), Query Frame = 1


Query: 1   MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
           M  D + +NK      +P+P I  LL ++ G+ +F+K+DL            DE K AF+
Sbjct: 464 MVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

Query: 61  TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
              G+F++L+MP+G+S AP+ F + I+ +L       V  Y D+ILI+SK+E +H++H+K
Sbjct: 524 CPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVK 583

Query: 121 LVFEALQRSKLFINLNKCIFCTEEISFLGFIISE 145
            V + L+ + L IN  KC F   ++ F+G+ ISE
Sbjct: 584 DVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617

[Close]

BLAST of Cucsa.374720 vs. Swiss-Prot
Match: TF27_SCHPO (Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-7 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.5e-30
Identity = 105/360 (29.17%), Postives = 167/360 (46.39%), Query Frame = 1


Query: 290  DYHLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCWPQARRD-NKFVKGCPICQKEKGSS 349
            D  L   +IK+ H  G   H G E    I+++RF W   R+   ++V+ C  CQ  K  S
Sbjct: 908  DTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK--S 967

Query: 350  SNASLYTSLS-IP--KNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKII 409
             N   Y  L  IP  +  WE L ++F+  LP++  G++++ VV DRFSKM+  +PC K I
Sbjct: 968  RNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSI 1027

Query: 410  DAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHP----Q 469
             A   A  F + ++   G PK I++D +  F S  WK    K++  +KFS    P    Q
Sbjct: 1028 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1087

Query: 470  TEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLT-F 529
            TE TN+++  L+  +   HP      +   + ++NN ++  T   PFEIV+  +P L+  
Sbjct: 1088 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1147

Query: 530  DLTSLPKEVEIQEATT----ESYKEEKN------KKRREVHFQ-VGDLAMAHLKKKRFP- 589
            +L S   + +     T    ++ KE  N      KK  ++  Q + +     L   +   
Sbjct: 1148 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1207

Query: 590  ---IGTCGKLKDKQIGPCRILDKYKPNAYNIELPHGFN--INPIFNVADLRSYNAPDEFH 624
               +    KL     GP  +L K  PN Y ++LP       +  F+V+ L  Y    E +
Sbjct: 1208 TGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELN 1264

HSP 2 Score: 108.2 bits (269), Expect = 3.2e-22
Identity = 56/154 (36.36%), Postives = 91/154 (59.09%), Query Frame = 1


Query: 1   MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
           M  D + +NK      +P+P I  LL ++ G+ +F+K+DL            DE K AF+
Sbjct: 464 MVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

Query: 61  TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
              G+F++L+MP+G+S AP+ F + I+ +L       V  Y D+ILI+SK+E +H++H+K
Sbjct: 524 CPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVK 583

Query: 121 LVFEALQRSKLFINLNKCIFCTEEISFLGFIISE 145
            V + L+ + L IN  KC F   ++ F+G+ ISE
Sbjct: 584 DVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617

[Close]

BLAST of Cucsa.374720 vs. TrEMBL
Match: A0A061FPS4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_044370 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 1.6e-145
Identity = 297/684 (43.42%), Postives = 398/684 (58.19%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC DSRAINKIT+KYRFPIPR++++LDQL G+ VFSK+DL            DEWKTAFK
Sbjct: 594  MCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSEYHQIRMRDGDEWKTAFK 653

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T +GLF+WL+MPFGLSNAPSTFM ++  VL  FLN FV VYFDDILIYS  +  H++HL+
Sbjct: 654  TPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHLR 713

Query: 121  LVFEALQRSKLFINLNKCIFCTEEISFLGFIISENQVKRDESKKNSNTIFDSLKRKLASQ 180
             V E LQ+ +L+INL KC F   E+   GF          E   ++   F+ +K  +   
Sbjct: 714  QVLEVLQKEQLYINLKKCSFMQPEVKD-GF----------EWSHSAQKAFERVKALMTKA 773

Query: 181  PVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSENLSSPSRQNWSTYGWISY--I 240
             VL LP+ +      C     G      Q G P+E FSE ++  SR+ +STY    Y  +
Sbjct: 774  LVLALPDFEKLFVVECDASHVGIGAVLSQDGRPIEFFSEKVTD-SRRRYSTYDLEFYALV 833

Query: 241  QRFDFLIKYQAGKEYIVADAFS--RKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYC 300
            +       Y A +E+ V       R+  +L+V+S ++T F  L   Y +D  F +I +  
Sbjct: 834  RAIRHWQHYLAYREFAVYSDHQALRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADL 893

Query: 301  TAHIH--DIDYHLVEA------------------LIKEAHLRGLAGHFGQEKTFQIVIKR 360
               +   ++ Y L EA                  +I+E H  GL GHFG++KT  +V  R
Sbjct: 894  QGSLQARNLPYRLHEAYLFKGNQLCIPEGYLREQIIRELHGNGLGGHFGRDKTLAMVADR 953

Query: 361  FCWPQARRD-NKFVKGCPICQKEKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQRG 420
            + WP+ RRD  + VK CP C   KGS+ N  LY  L  P   W  L ++FV+GLPKT +G
Sbjct: 954  YYWPKMRRDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKG 1013

Query: 421  FDSVMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFW 480
            FDS+ VV DRFSKM+HF+PC +  DA HIA  FF E+VRLHGIP +IVSDR+  F+ HFW
Sbjct: 1014 FDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFW 1073

Query: 481  KTLWKKFDTTLKFSTTAHP----QTEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNN 540
            +TLW+KF T LK+S+T HP    QTEV NRSLGN++  L  N+P+  D+V PQAEFA+NN
Sbjct: 1074 RTLWRKFGTELKYSSTCHPQTDSQTEVVNRSLGNILRCLIQNNPKTWDLVKPQAEFAYNN 1133

Query: 541  MMNRTTGKCPFEIVYTKAPRLTFDLTSLPKEVEIQ---------------------EATT 600
             +NR+  K PFE  Y   P+   DL  LP+E  +                      +A+ 
Sbjct: 1134 SVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADHIQKIHEEVKAALKASN 1193

Query: 601  ESYKEEKNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAYNI 621
              Y    N+ RR+  F+ GD  + +L+++RFP GT  KLK ++ GPC++L K   NAY I
Sbjct: 1194 AEYSFTANQHRRKQEFEEGDQVLVYLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLI 1253

[Close]

BLAST of Cucsa.374720 vs. TrEMBL
Match: M5VJX1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016013mg PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.7e-134
Identity = 290/711 (40.79%), Postives = 382/711 (53.73%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSRDEWKTAFKTYEGLFKWLL 60
            MC DSRAINKITVKYRFPIPR+ D+LD L G+ VFSK+DL             G  +  +
Sbjct: 316  MCVDSRAINKITVKYRFPIPRLEDMLDVLSGSRVFSKIDLR-----------SGYHQIRI 375

Query: 61   MPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLKLVFEALQRSK 120
             P        TFM L++ VL  F+  FV VYFDDILIYS  + +H+ HL+ V + L+ +K
Sbjct: 376  RPGTDYLNGCTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDLLRENK 435

Query: 121  LFINLNKCIFCTEEISFLGFII-------SENQVKRDESKKNSNTIFD------------ 180
            L++NL KC FCT ++ FLGF++        + ++K         T+ +            
Sbjct: 436  LYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYR 495

Query: 181  ------------SLKRKLASQPVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSE 240
                          K KL + PVL LP  +      C     G      Q   PV  FSE
Sbjct: 496  RFLGRGAREKLCRYKEKLYTAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSE 555

Query: 241  NLSSPSRQNWSTYG---------------------------------WISYIQRFDFLIK 300
             LS  +RQ WSTY                                  W++++Q+F F IK
Sbjct: 556  KLSE-ARQKWSTYDQEFYAVKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFFIK 615

Query: 301  YQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYCTAHIHDIDYH 360
            + +GK   VADA SR+ +LL  L+ E+  F  L +LYE D DF EIW+ CT      DY 
Sbjct: 616  HTSGKTNRVADALSRRASLLVTLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPVADYF 675

Query: 361  LVEALIKEAHLRGLAGHFGQEKTFQIVIKR-FCWPQARRD-NKFVKGCPICQKEKGSSSN 420
            L E  + + +   +     +EK  + +    F WPQ +RD    V+ C  CQ  KG   N
Sbjct: 676  LNEGYLFKGNQLCIPVSSLREKLIRDLHGGGFYWPQLKRDIGTIVRKCYTCQTSKGQVQN 735

Query: 421  ASLYTSLSIPKNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKIIDAVHI 480
              LY  L +P +IW+DL ++FV+GLP+TQ G DSV VV DRFSKM+HF+ CKK  DA +I
Sbjct: 736  TGLYMPLPVPNDIWQDLAMDFVLGLPRTQSGVDSVFVVVDRFSKMTHFIACKKTADASNI 795

Query: 481  ATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHP----QTEVTN 540
            A  FFRE+VRLHG+P +I S+R+T FLSHFW TLW+ F TTL  S TAHP    QTEVTN
Sbjct: 796  AKLFFREVVRLHGVPTSITSNRDTKFLSHFWITLWRLFGTTLNRSNTAHPQTDGQTEVTN 855

Query: 541  RSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLTFDLTSLP 600
            R+LGN++  + G  P++ D  LPQ EFA+N+ ++  TGK PF IVYT  P    DL  LP
Sbjct: 856  RTLGNMVRSVCGEKPKRWDYALPQMEFAYNSAVHSATGKSPFSIVYTAIPNHVVDLVKLP 915

Query: 601  K--------------------EVEIQ-EATTESYKEEKNKKRREVHFQVGDLAMAHLKKK 617
            +                    EV+ + E T   YK   ++ RR   FQ GD  M  L+K+
Sbjct: 916  RGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMIFLRKE 975

[Close]

BLAST of Cucsa.374720 vs. TrEMBL
Match: A5APH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018180 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.2e-129
Identity = 275/683 (40.26%), Postives = 381/683 (55.78%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC DSRAINKIT KY+FPIPR++D+LD + G+++FSK+DL            DEWKT+FK
Sbjct: 563  MCVDSRAINKITTKYQFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRXRLGDEWKTSFK 622

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T +GL++WL+MPFGL+NAPSTFM ++  VL  F+ +F  VYFDDILIYS+   DH +HLK
Sbjct: 623  TKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFFVVYFDDILIYSRXCEDHKEHLK 682

Query: 121  LVFEA-LQRSKLFIN--LNKCIFCTEEISFLGFIISENQVKRDESKKNSNTIFDSLKRKL 180
               E   ++ K  ++  +   I    ++ + G+I+  N+             F+ +K K+
Sbjct: 683  QGVEXDPEKIKAIVDWPVPTNIHEGAKLPWNGYILVANKA------------FEEIKSKM 742

Query: 181  ASQPVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSEN----LSSPSRQNWSTYG 240
             +  +L+L + +      C     G      Q GHPV  F+      L+S  + N     
Sbjct: 743  VNPXILRLXDFEKVFEVACDASHVGIGAVLSQEGHPVAFFNHEVLRYLNSQKKLNSRXAK 802

Query: 241  WISYIQRFDFLIKYQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIW 300
            W S++Q F F +K+ A  E  V DA S+K  LL  +S     F  L   Y+ND DFG+++
Sbjct: 803  WSSFLQLFTFNLKHCAXIENKVXDALSKKXFLLVNMSTTTIGFEELKHCYDNDADFGDVY 862

Query: 301  S--YCTAHIHDIDYHLVEA------------------LIKEAHLRGLAGHFGQEKTFQIV 360
            S     +    ID+ ++E                   +I E H  G+ GHF ++KT  +V
Sbjct: 863  SSLLSGSKATCIDFQILEGYLFYKNHLCLPRTSLRDHVIWELHGGGMGGHFRRDKTIALV 922

Query: 361  IKRFCWPQARRDNKFVKGCPICQKEKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQ 420
              RF WP+                 KG   N  LYT L +P   WEDL ++FV+GLP+TQ
Sbjct: 923  EDRFFWPR-----------------KGLKQNTGLYTPLPVPFKPWEDLSMDFVLGLPRTQ 982

Query: 421  RGFDSVMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSH 480
            RGFDS+ VV DRFSKM+HF+PCKK  +A ++   FF+E+V+LHG+P++IVS+R+  F+S+
Sbjct: 983  RGFDSIFVVVDRFSKMTHFIPCKKTSNASYVTALFFKEVVQLHGLPQSIVSNRDVKFMSY 1042

Query: 481  FWKTLWKKFDTTLKFSTTAHP----QTEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAF 540
            FWKTLW K  T LKFS++ HP    QTEV NRSLGNL+  +  +  R  D VLPQAEFAF
Sbjct: 1043 FWKTLWVKLGTQLKFSSSFHPQTDGQTEVVNRSLGNLLRCIVRDQLRNWDNVLPQAEFAF 1102

Query: 541  NNMMNRTTGKCPFEIVYTKAPRLTFDLTSLPKEVEIQE---------------------A 600
            N+  NRTTG  PFE+ Y   P+   DL  LP  V   +                      
Sbjct: 1103 NSSTNRTTGYLPFEVAYGLKPKQPVDLIPLPTSVRTSQDGDAFARHIRDIHEKVREKIKI 1162

Query: 601  TTESYKEEKNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAY 618
            + E+YKE  +  RR + FQ G L M  L+ +RF   T  KL+ K+ GP R+L +   NAY
Sbjct: 1163 SNENYKEAXDAHRRYIQFQEGGLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAY 1216

[Close]

BLAST of Cucsa.374720 vs. TrEMBL
Match: A0A061FQC4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_035549 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 6.6e-123
Identity = 279/681 (40.97%), Postives = 372/681 (54.63%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC DSRAINKIT+K RFPIPR++++LDQL G+ VFSK+DL            DE KTAFK
Sbjct: 658  MCVDSRAINKITIKSRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDERKTAFK 717

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T +GLF+WL+MPFGLSNAPSTFM      L     K  A+  +     S  E      L 
Sbjct: 718  TPDGLFEWLVMPFGLSNAPSTFMSHGRKGLKPDPEKIRAIS-EWPAPTSIKEVRSFHGLA 777

Query: 121  LVFEALQRSKLFINLNKCIFCTEEISFLGFIISENQVKRDESKKNSNTIFDSLKRKLASQ 180
              +    R+  F ++   I  TE +   GF          E   ++   F+ +K  +   
Sbjct: 778  SFYRRFIRN--FSSIMSHI--TESLKKDGF----------EWSHSAQKAFEIVKALMTEA 837

Query: 181  PVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSENLSSPSRQNWSTYGWISYIQR 240
            PVL LP+ +      C     G      Q G P+E FSE L+  SR+++STY    Y   
Sbjct: 838  PVLALPDFEKLFVVECDASHVGIGAVLSQDGRPIEFFSEKLTD-SRRHYSTYDLEFY--- 897

Query: 241  FDFLIKYQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYCTA-- 300
                          VADA SR+  +L+V+S ++T F  L   Y +D  F +I +      
Sbjct: 898  ---------ALSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSL 957

Query: 301  -------HIHDIDY------------HLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCW 360
                    +H+ DY             L E +I+E H  GL GHFG++KT  +V  R+ W
Sbjct: 958  QAENLPYRLHE-DYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYW 1017

Query: 361  PQARRD-NKFVKGCPICQKEKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQRGFDS 420
            P+ R+D  + VK CP C   KGS+ N  LY  L  P   W  L ++FV+GLPKT + FDS
Sbjct: 1018 PKMRQDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKRFDS 1077

Query: 421  VMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTL 480
            + VV DRFSKM+HF+PC +  DA HIA  FFREIVRLH IP +IVSDR+  F+ HFW+TL
Sbjct: 1078 IFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVRLHRIPTSIVSDRDVKFMGHFWRTL 1137

Query: 481  WKKFDTTLKFSTTAHPQT----EVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMN 540
            W+KF T LK+S+T HPQT    EV NRSLGN++  L  N+P+  D+V+PQAEFA+NN +N
Sbjct: 1138 WRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVN 1197

Query: 541  RTTGKCPFEIVYTKAPRLTFDLTSLPKEVEIQ---------------------EATTESY 600
            R+  K PFE  Y   P+   DL  LP+E  +                      +A+   Y
Sbjct: 1198 RSIKKTPFEAAYGLKPQHVLDLVPLPQEPRVSNEGELFADHIRKIHEEVKTALKASNAQY 1257

Query: 601  KEEKNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAYNIELP 621
                N+ RR+  F+ GD  + HL+++RFP GT  KLK ++ GPC++L K   NAY IELP
Sbjct: 1258 SFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLIELP 1309

[Close]

BLAST of Cucsa.374720 vs. TrEMBL
Match: Q60ET2_ORYSJ (Putative polyprotein OS=Oryza sativa subsp. japonica GN=OJ1122_B08.16 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.9e-122
Identity = 255/663 (38.46%), Postives = 363/663 (54.75%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC D RAIN I+V+YR PIPR++D+LD+L GA++FSK+DL            DEWK AFK
Sbjct: 525  MCVDCRAINSISVRYRHPIPRLDDMLDELSGAVIFSKIDLRSGYHQIRMKEGDEWKIAFK 584

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T  GL++WL+MPFGL+NAPSTFM L++HVL  F+ KFV VYFDDILIYSK   +H+ H++
Sbjct: 585  TKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTMEEHLAHIR 644

Query: 121  LVFEALQRSKLFINLNKCIFCTEE----ISFLGFIISENQVKRDESKKNSNTIFDSLKRK 180
             V E L+  +LF N  KC FC E+    I++    +   Q+      K    +  +L+  
Sbjct: 645  QVLEMLRSERLFANFEKCTFCREKEGKPIAYFSEKLGSAQLNYPVYDKELYALVRALE-- 704

Query: 181  LASQPVLKLPESDSPCRRQWSGNWCCPFQGGHPVESFSENLSSPSRQNWSTYGWISYIQR 240
               Q  L            W   +       H    +    ++ +R++     W+ +I+ 
Sbjct: 705  -TWQHYL------------WPKEFV--IHSNHEALKYLRGQANLNRRHAK---WVEFIES 764

Query: 241  FDFLIKYQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYCTAHI 300
            F ++++Y+ GKE +VADA SRK  LLT L  ++++   L +LY  D +F + +S C    
Sbjct: 765  FPYIVRYKKGKENVVADALSRKSVLLTQLDVKVSSLESLKELYSKDSEFSDPYSKCLDGK 824

Query: 301  HDIDYHLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCWPQA--RRD-NKFVKGCPICQK 360
                YH+ +  +  A                    + C P++  R D  ++V+ C    K
Sbjct: 825  GWEKYHVHDGFLFRAD-------------------KLCVPESSLRHDVERYVQRCVTSHK 884

Query: 361  EKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKK 420
             K   +   LYT L +P   WED+ ++FV+GLP+T+RG DS+ V  DRFSKM+HF+PC K
Sbjct: 885  AKSKLNPHGLYTPLPVPNAPWEDISMDFVLGLPRTRRGRDSIFVAVDRFSKMAHFIPCNK 944

Query: 421  IIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHP--- 480
              DA H+A  FFRE+VRLHG+P+TIVSDR+  F+S+FWKTLW K  T L FSTT H    
Sbjct: 945  SDDASHVADLFFREVVRLHGVPRTIVSDRDVKFMSYFWKTLWAKLGTKLLFSTTCHSQID 1004

Query: 481  -QTEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLT 540
             Q EV NR+L  L+  +   + ++ +  LP  EFA+N +++ TT   PFE+VY   P   
Sbjct: 1005 GQMEVVNRTLSMLLRMMIKKNLKEWEDCLPHVEFAYNRVVHSTTQLSPFEVVYGFNPITP 1064

Query: 541  FDLTSLP---------------------KEVEIQEATTESYKEEKNKKRREVHFQVGDLA 600
             DL  LP                     K  E  E   +SY  + NK R+++ FQ G+L 
Sbjct: 1065 LDLLPLPLQERANMEATKRADYVKKMHEKTKETIERIIQSYAAKANKDRKKMLFQPGELV 1124

Query: 601  MAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAYNIELPHGFNINPIFNVADLRSYNA 622
              HL+K RFP     KL     GP R+L+K   NAY I+LP  + ++  FNV DL  +  
Sbjct: 1125 WVHLRKDRFPEKRKSKLMPHGDGPFRVLEKITDNAYKIDLPGDYTVSNTFNVVDLSPFFG 1148

[Close]

BLAST of Cucsa.374720 vs. NCBI nr
Match: gi|590567360|ref|XP_007010495.1| (Uncharacterized protein TCM_044370 [Theobroma cacao])

HSP 1 Score: 524.6 bits (1350), Expect = 2.3e-145
Identity = 297/684 (43.42%), Postives = 398/684 (58.19%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC DSRAINKIT+KYRFPIPR++++LDQL G+ VFSK+DL            DEWKTAFK
Sbjct: 594  MCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSEYHQIRMRDGDEWKTAFK 653

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T +GLF+WL+MPFGLSNAPSTFM ++  VL  FLN FV VYFDDILIYS  +  H++HL+
Sbjct: 654  TPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHLR 713

Query: 121  LVFEALQRSKLFINLNKCIFCTEEISFLGFIISENQVKRDESKKNSNTIFDSLKRKLASQ 180
             V E LQ+ +L+INL KC F   E+   GF          E   ++   F+ +K  +   
Sbjct: 714  QVLEVLQKEQLYINLKKCSFMQPEVKD-GF----------EWSHSAQKAFERVKALMTKA 773

Query: 181  PVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSENLSSPSRQNWSTYGWISY--I 240
             VL LP+ +      C     G      Q G P+E FSE ++  SR+ +STY    Y  +
Sbjct: 774  LVLALPDFEKLFVVECDASHVGIGAVLSQDGRPIEFFSEKVTD-SRRRYSTYDLEFYALV 833

Query: 241  QRFDFLIKYQAGKEYIVADAFS--RKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYC 300
            +       Y A +E+ V       R+  +L+V+S ++T F  L   Y +D  F +I +  
Sbjct: 834  RAIRHWQHYLAYREFAVYSDHQALRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADL 893

Query: 301  TAHIH--DIDYHLVEA------------------LIKEAHLRGLAGHFGQEKTFQIVIKR 360
               +   ++ Y L EA                  +I+E H  GL GHFG++KT  +V  R
Sbjct: 894  QGSLQARNLPYRLHEAYLFKGNQLCIPEGYLREQIIRELHGNGLGGHFGRDKTLAMVADR 953

Query: 361  FCWPQARRD-NKFVKGCPICQKEKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQRG 420
            + WP+ RRD  + VK CP C   KGS+ N  LY  L  P   W  L ++FV+GLPKT +G
Sbjct: 954  YYWPKMRRDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKG 1013

Query: 421  FDSVMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFW 480
            FDS+ VV DRFSKM+HF+PC +  DA HIA  FF E+VRLHGIP +IVSDR+  F+ HFW
Sbjct: 1014 FDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFW 1073

Query: 481  KTLWKKFDTTLKFSTTAHP----QTEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNN 540
            +TLW+KF T LK+S+T HP    QTEV NRSLGN++  L  N+P+  D+V PQAEFA+NN
Sbjct: 1074 RTLWRKFGTELKYSSTCHPQTDSQTEVVNRSLGNILRCLIQNNPKTWDLVKPQAEFAYNN 1133

Query: 541  MMNRTTGKCPFEIVYTKAPRLTFDLTSLPKEVEIQ---------------------EATT 600
             +NR+  K PFE  Y   P+   DL  LP+E  +                      +A+ 
Sbjct: 1134 SVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADHIQKIHEEVKAALKASN 1193

Query: 601  ESYKEEKNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAYNI 621
              Y    N+ RR+  F+ GD  + +L+++RFP GT  KLK ++ GPC++L K   NAY I
Sbjct: 1194 AEYSFTANQHRRKQEFEEGDQVLVYLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLI 1253

[Close]

BLAST of Cucsa.374720 vs. NCBI nr
Match: gi|595792899|ref|XP_007200198.1| (hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica])

HSP 1 Score: 486.9 bits (1252), Expect = 5.4e-134
Identity = 290/711 (40.79%), Postives = 382/711 (53.73%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSRDEWKTAFKTYEGLFKWLL 60
            MC DSRAINKITVKYRFPIPR+ D+LD L G+ VFSK+DL             G  +  +
Sbjct: 316  MCVDSRAINKITVKYRFPIPRLEDMLDVLSGSRVFSKIDLR-----------SGYHQIRI 375

Query: 61   MPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLKLVFEALQRSK 120
             P        TFM L++ VL  F+  FV VYFDDILIYS  + +H+ HL+ V + L+ +K
Sbjct: 376  RPGTDYLNGCTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDLLRENK 435

Query: 121  LFINLNKCIFCTEEISFLGFII-------SENQVKRDESKKNSNTIFD------------ 180
            L++NL KC FCT ++ FLGF++        + ++K         T+ +            
Sbjct: 436  LYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYR 495

Query: 181  ------------SLKRKLASQPVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSE 240
                          K KL + PVL LP  +      C     G      Q   PV  FSE
Sbjct: 496  RFLGRGAREKLCRYKEKLYTAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSE 555

Query: 241  NLSSPSRQNWSTYG---------------------------------WISYIQRFDFLIK 300
             LS  +RQ WSTY                                  W++++Q+F F IK
Sbjct: 556  KLSE-ARQKWSTYDQEFYAVKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFFIK 615

Query: 301  YQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYCTAHIHDIDYH 360
            + +GK   VADA SR+ +LL  L+ E+  F  L +LYE D DF EIW+ CT      DY 
Sbjct: 616  HTSGKTNRVADALSRRASLLVTLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPVADYF 675

Query: 361  LVEALIKEAHLRGLAGHFGQEKTFQIVIKR-FCWPQARRD-NKFVKGCPICQKEKGSSSN 420
            L E  + + +   +     +EK  + +    F WPQ +RD    V+ C  CQ  KG   N
Sbjct: 676  LNEGYLFKGNQLCIPVSSLREKLIRDLHGGGFYWPQLKRDIGTIVRKCYTCQTSKGQVQN 735

Query: 421  ASLYTSLSIPKNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKKIIDAVHI 480
              LY  L +P +IW+DL ++FV+GLP+TQ G DSV VV DRFSKM+HF+ CKK  DA +I
Sbjct: 736  TGLYMPLPVPNDIWQDLAMDFVLGLPRTQSGVDSVFVVVDRFSKMTHFIACKKTADASNI 795

Query: 481  ATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHP----QTEVTN 540
            A  FFRE+VRLHG+P +I S+R+T FLSHFW TLW+ F TTL  S TAHP    QTEVTN
Sbjct: 796  AKLFFREVVRLHGVPTSITSNRDTKFLSHFWITLWRLFGTTLNRSNTAHPQTDGQTEVTN 855

Query: 541  RSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLTFDLTSLP 600
            R+LGN++  + G  P++ D  LPQ EFA+N+ ++  TGK PF IVYT  P    DL  LP
Sbjct: 856  RTLGNMVRSVCGEKPKRWDYALPQMEFAYNSAVHSATGKSPFSIVYTAIPNHVVDLVKLP 915

Query: 601  K--------------------EVEIQ-EATTESYKEEKNKKRREVHFQVGDLAMAHLKKK 617
            +                    EV+ + E T   YK   ++ RR   FQ GD  M  L+K+
Sbjct: 916  RGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMIFLRKE 975

[Close]

BLAST of Cucsa.374720 vs. NCBI nr
Match: gi|147768751|emb|CAN71532.1| (hypothetical protein VITISV_018180 [Vitis vinifera])

HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129
Identity = 275/683 (40.26%), Postives = 381/683 (55.78%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC DSRAINKIT KY+FPIPR++D+LD + G+++FSK+DL            DEWKT+FK
Sbjct: 563  MCVDSRAINKITTKYQFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRXRLGDEWKTSFK 622

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T +GL++WL+MPFGL+NAPSTFM ++  VL  F+ +F  VYFDDILIYS+   DH +HLK
Sbjct: 623  TKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFFVVYFDDILIYSRXCEDHKEHLK 682

Query: 121  LVFEA-LQRSKLFIN--LNKCIFCTEEISFLGFIISENQVKRDESKKNSNTIFDSLKRKL 180
               E   ++ K  ++  +   I    ++ + G+I+  N+             F+ +K K+
Sbjct: 683  QGVEXDPEKIKAIVDWPVPTNIHEGAKLPWNGYILVANKA------------FEEIKSKM 742

Query: 181  ASQPVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSEN----LSSPSRQNWSTYG 240
             +  +L+L + +      C     G      Q GHPV  F+      L+S  + N     
Sbjct: 743  VNPXILRLXDFEKVFEVACDASHVGIGAVLSQEGHPVAFFNHEVLRYLNSQKKLNSRXAK 802

Query: 241  WISYIQRFDFLIKYQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIW 300
            W S++Q F F +K+ A  E  V DA S+K  LL  +S     F  L   Y+ND DFG+++
Sbjct: 803  WSSFLQLFTFNLKHCAXIENKVXDALSKKXFLLVNMSTTTIGFEELKHCYDNDADFGDVY 862

Query: 301  S--YCTAHIHDIDYHLVEA------------------LIKEAHLRGLAGHFGQEKTFQIV 360
            S     +    ID+ ++E                   +I E H  G+ GHF ++KT  +V
Sbjct: 863  SSLLSGSKATCIDFQILEGYLFYKNHLCLPRTSLRDHVIWELHGGGMGGHFRRDKTIALV 922

Query: 361  IKRFCWPQARRDNKFVKGCPICQKEKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQ 420
              RF WP+                 KG   N  LYT L +P   WEDL ++FV+GLP+TQ
Sbjct: 923  EDRFFWPR-----------------KGLKQNTGLYTPLPVPFKPWEDLSMDFVLGLPRTQ 982

Query: 421  RGFDSVMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSH 480
            RGFDS+ VV DRFSKM+HF+PCKK  +A ++   FF+E+V+LHG+P++IVS+R+  F+S+
Sbjct: 983  RGFDSIFVVVDRFSKMTHFIPCKKTSNASYVTALFFKEVVQLHGLPQSIVSNRDVKFMSY 1042

Query: 481  FWKTLWKKFDTTLKFSTTAHP----QTEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAF 540
            FWKTLW K  T LKFS++ HP    QTEV NRSLGNL+  +  +  R  D VLPQAEFAF
Sbjct: 1043 FWKTLWVKLGTQLKFSSSFHPQTDGQTEVVNRSLGNLLRCIVRDQLRNWDNVLPQAEFAF 1102

Query: 541  NNMMNRTTGKCPFEIVYTKAPRLTFDLTSLPKEVEIQE---------------------A 600
            N+  NRTTG  PFE+ Y   P+   DL  LP  V   +                      
Sbjct: 1103 NSSTNRTTGYLPFEVAYGLKPKQPVDLIPLPTSVRTSQDGDAFARHIRDIHEKVREKIKI 1162

Query: 601  TTESYKEEKNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAY 618
            + E+YKE  +  RR + FQ G L M  L+ +RF   T  KL+ K+ GP R+L +   NAY
Sbjct: 1163 SNENYKEAXDAHRRYIQFQEGGLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAY 1216

[Close]

BLAST of Cucsa.374720 vs. NCBI nr
Match: gi|590600507|ref|XP_007019474.1| (Uncharacterized protein TCM_035549 [Theobroma cacao])

HSP 1 Score: 449.5 bits (1155), Expect = 9.5e-123
Identity = 279/681 (40.97%), Postives = 372/681 (54.63%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC DSRAINKIT+K RFPIPR++++LDQL G+ VFSK+DL            DE KTAFK
Sbjct: 658  MCVDSRAINKITIKSRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDERKTAFK 717

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T +GLF+WL+MPFGLSNAPSTFM      L     K  A+  +     S  E      L 
Sbjct: 718  TPDGLFEWLVMPFGLSNAPSTFMSHGRKGLKPDPEKIRAIS-EWPAPTSIKEVRSFHGLA 777

Query: 121  LVFEALQRSKLFINLNKCIFCTEEISFLGFIISENQVKRDESKKNSNTIFDSLKRKLASQ 180
              +    R+  F ++   I  TE +   GF          E   ++   F+ +K  +   
Sbjct: 778  SFYRRFIRN--FSSIMSHI--TESLKKDGF----------EWSHSAQKAFEIVKALMTEA 837

Query: 181  PVLKLPESDS----PCRRQWSGNWCCPFQGGHPVESFSENLSSPSRQNWSTYGWISYIQR 240
            PVL LP+ +      C     G      Q G P+E FSE L+  SR+++STY    Y   
Sbjct: 838  PVLALPDFEKLFVVECDASHVGIGAVLSQDGRPIEFFSEKLTD-SRRHYSTYDLEFY--- 897

Query: 241  FDFLIKYQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYCTA-- 300
                          VADA SR+  +L+V+S ++T F  L   Y +D  F +I +      
Sbjct: 898  ---------ALSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSL 957

Query: 301  -------HIHDIDY------------HLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCW 360
                    +H+ DY             L E +I+E H  GL GHFG++KT  +V  R+ W
Sbjct: 958  QAENLPYRLHE-DYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYW 1017

Query: 361  PQARRD-NKFVKGCPICQKEKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQRGFDS 420
            P+ R+D  + VK CP C   KGS+ N  LY  L  P   W  L ++FV+GLPKT + FDS
Sbjct: 1018 PKMRQDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKRFDS 1077

Query: 421  VMVVADRFSKMSHFLPCKKIIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTL 480
            + VV DRFSKM+HF+PC +  DA HIA  FFREIVRLH IP +IVSDR+  F+ HFW+TL
Sbjct: 1078 IFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVRLHRIPTSIVSDRDVKFMGHFWRTL 1137

Query: 481  WKKFDTTLKFSTTAHPQT----EVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMN 540
            W+KF T LK+S+T HPQT    EV NRSLGN++  L  N+P+  D+V+PQAEFA+NN +N
Sbjct: 1138 WRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVN 1197

Query: 541  RTTGKCPFEIVYTKAPRLTFDLTSLPKEVEIQ---------------------EATTESY 600
            R+  K PFE  Y   P+   DL  LP+E  +                      +A+   Y
Sbjct: 1198 RSIKKTPFEAAYGLKPQHVLDLVPLPQEPRVSNEGELFADHIRKIHEEVKTALKASNAQY 1257

Query: 601  KEEKNKKRREVHFQVGDLAMAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAYNIELP 621
                N+ RR+  F+ GD  + HL+++RFP GT  KLK ++ GPC++L K   NAY IELP
Sbjct: 1258 SFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLIELP 1309

[Close]

BLAST of Cucsa.374720 vs. NCBI nr
Match: gi|53749310|gb|AAU90169.1| (putative polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 448.0 bits (1151), Expect = 2.8e-122
Identity = 255/663 (38.46%), Postives = 363/663 (54.75%), Query Frame = 1


Query: 1    MCADSRAINKITVKYRFPIPRINDLLDQLGGALVFSKVDLSR----------DEWKTAFK 60
            MC D RAIN I+V+YR PIPR++D+LD+L GA++FSK+DL            DEWK AFK
Sbjct: 525  MCVDCRAINSISVRYRHPIPRLDDMLDELSGAVIFSKIDLRSGYHQIRMKEGDEWKIAFK 584

Query: 61   TYEGLFKWLLMPFGLSNAPSTFMWLIHHVLHLFLNKFVAVYFDDILIYSKNEHDHMQHLK 120
            T  GL++WL+MPFGL+NAPSTFM L++HVL  F+ KFV VYFDDILIYSK   +H+ H++
Sbjct: 585  TKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTMEEHLAHIR 644

Query: 121  LVFEALQRSKLFINLNKCIFCTEE----ISFLGFIISENQVKRDESKKNSNTIFDSLKRK 180
             V E L+  +LF N  KC FC E+    I++    +   Q+      K    +  +L+  
Sbjct: 645  QVLEMLRSERLFANFEKCTFCREKEGKPIAYFSEKLGSAQLNYPVYDKELYALVRALE-- 704

Query: 181  LASQPVLKLPESDSPCRRQWSGNWCCPFQGGHPVESFSENLSSPSRQNWSTYGWISYIQR 240
               Q  L            W   +       H    +    ++ +R++     W+ +I+ 
Sbjct: 705  -TWQHYL------------WPKEFV--IHSNHEALKYLRGQANLNRRHAK---WVEFIES 764

Query: 241  FDFLIKYQAGKEYIVADAFSRKGTLLTVLSAEITAFNHLPKLYENDKDFGEIWSYCTAHI 300
            F ++++Y+ GKE +VADA SRK  LLT L  ++++   L +LY  D +F + +S C    
Sbjct: 765  FPYIVRYKKGKENVVADALSRKSVLLTQLDVKVSSLESLKELYSKDSEFSDPYSKCLDGK 824

Query: 301  HDIDYHLVEALIKEAHLRGLAGHFGQEKTFQIVIKRFCWPQA--RRD-NKFVKGCPICQK 360
                YH+ +  +  A                    + C P++  R D  ++V+ C    K
Sbjct: 825  GWEKYHVHDGFLFRAD-------------------KLCVPESSLRHDVERYVQRCVTSHK 884

Query: 361  EKGSSSNASLYTSLSIPKNIWEDLPIEFVVGLPKTQRGFDSVMVVADRFSKMSHFLPCKK 420
             K   +   LYT L +P   WED+ ++FV+GLP+T+RG DS+ V  DRFSKM+HF+PC K
Sbjct: 885  AKSKLNPHGLYTPLPVPNAPWEDISMDFVLGLPRTRRGRDSIFVAVDRFSKMAHFIPCNK 944

Query: 421  IIDAVHIATPFFREIVRLHGIPKTIVSDRETNFLSHFWKTLWKKFDTTLKFSTTAHP--- 480
              DA H+A  FFRE+VRLHG+P+TIVSDR+  F+S+FWKTLW K  T L FSTT H    
Sbjct: 945  SDDASHVADLFFREVVRLHGVPRTIVSDRDVKFMSYFWKTLWAKLGTKLLFSTTCHSQID 1004

Query: 481  -QTEVTNRSLGNLICYLSGNHPRQCDMVLPQAEFAFNNMMNRTTGKCPFEIVYTKAPRLT 540
             Q EV NR+L  L+  +   + ++ +  LP  EFA+N +++ TT   PFE+VY   P   
Sbjct: 1005 GQMEVVNRTLSMLLRMMIKKNLKEWEDCLPHVEFAYNRVVHSTTQLSPFEVVYGFNPITP 1064

Query: 541  FDLTSLP---------------------KEVEIQEATTESYKEEKNKKRREVHFQVGDLA 600
             DL  LP                     K  E  E   +SY  + NK R+++ FQ G+L 
Sbjct: 1065 LDLLPLPLQERANMEATKRADYVKKMHEKTKETIERIIQSYAAKANKDRKKMLFQPGELV 1124

Query: 601  MAHLKKKRFPIGTCGKLKDKQIGPCRILDKYKPNAYNIELPHGFNINPIFNVADLRSYNA 622
              HL+K RFP     KL     GP R+L+K   NAY I+LP  + ++  FNV DL  +  
Sbjct: 1125 WVHLRKDRFPEKRKSKLMPHGDGPFRVLEKITDNAYKIDLPGDYTVSNTFNVVDLSPFFG 1148

The following BLAST results are available for this feature:

BLAST of Cucsa.374720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YG31B_YEAST	1.8e-33	27.09	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
YI31B_YEAST	3.1e-33	27.41	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
TF21_SCHPO	5.5e-30	29.17	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF211_SCHPO	5.5e-30	29.17	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF27_SCHPO	5.5e-30	29.17	Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cucsa.374720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061FPS4_THECC	1.6e-145	43.42	Uncharacterized protein OS=Theobroma cacao GN=TCM_044370 PE=4 SV=1	[more]
M5VJX1_PRUPE	3.7e-134	40.79	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016013mg PE=4 S...	[more]
A5APH5_VITVI	1.2e-129	40.26	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018180 PE=4 SV=1	[more]
A0A061FQC4_THECC	6.6e-123	40.97	Uncharacterized protein OS=Theobroma cacao GN=TCM_035549 PE=4 SV=1	[more]
Q60ET2_ORYSJ	1.9e-122	38.46	Putative polyprotein OS=Oryza sativa subsp. japonica GN=OJ1122_B08.16 PE=4 SV=1	[more]

BLAST of Cucsa.374720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|590567360\|ref\|XP_007010495.1\|	2.3e-145	43.42	Uncharacterized protein TCM_044370 [Theobroma cacao]	[more]
gi\|595792899\|ref\|XP_007200198.1\|	5.4e-134	40.79	hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica]	[more]
gi\|147768751\|emb\|CAN71532.1\|	1.8e-129	40.26	hypothetical protein VITISV_018180 [Vitis vinifera]	[more]
gi\|590600507\|ref\|XP_007019474.1\|	9.5e-123	40.97	Uncharacterized protein TCM_035549 [Theobroma cacao]	[more]
gi\|53749310\|gb\|AAU90169.1\|	2.8e-122	38.46	putative polyprotein [Oryza sativa Japonica Group]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.374720.1	Cucsa.374720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 52..142 score: 3.4
IPR000477	Reverse transcriptase domain	PROFILE	PS50878	RT_POL	coord: 1..142 score: 10
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 356..515 score: 8
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 381..518 score: 7.1
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 359..509 score: 1.04
None	No IPR available	unknown	Coil	Coil	coord: 529..549 scor
None	No IPR available	GENE3D	G3DSA:3.10.10.10		coord: 1..61 score: 3.
None	No IPR available	GENE3D	G3DSA:3.30.70.270		coord: 62..145 score: 9.
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 1..616 score: 7.2E
None	No IPR available	PANTHER	PTHR24559:SF174	SUBFAMILY NOT NAMED	coord: 1..616 score: 7.2E
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 1..233 score: 5.34

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.374720	Watermelon (97103) v2	cgywmbB643
Cucsa.374720	Cucumber (Chinese Long) v2	cgycuB524
Cucsa.374720	Wild cucumber (PI 183967)	cgycpiB553
Cucsa.374720	Melon (DHL92) v3.5.1	cgymeB608
Cucsa.374720	Watermelon (Charleston Gray)	cgywcgB639
Cucsa.374720	Watermelon (97103) v1	cgywmB676
Cucsa.374720	Cucurbita pepo (Zucchini)	cgycpeB0988
Cucsa.374720	Bottle gourd (USVL1VR-Ls)	cgylsiB606
Cucsa.374720	Melon (DHL92) v3.6.1	cgymedB605
Cucsa.374720	Cucumber (Chinese Long) v3	cgycucB568