Cucsa.374250 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTGTTAAGATGTCCAATGGAAGCTCCAAATATGAGTGTTTGTTATTTGGTATAATATATATTACTCTCTCTTTGTTTCTCTCTGTTTGATCTCTTGATACACATGCCTAGCTAAAAGAGATGATGTGATATTAAAATTATATAATCAATACATTTGCATAAATGTGTTTATAGATATGGATGATACTTTGTACCCAAGAAGTTGTGGAATCAACCTAGCATGCCGTAAGAAAATTGAAGGTAACACATGAATCATAATTTTAAAGTTAGCGGAAATTAAAGCACATAGAATTAACTAAAGTCATACTATATATTAGTAATGTTATTGAATAATCTAGTTGTTTTGATACTAATGAATATATATATGCAGAGTATATGTTGAAGTATTTGCATATGGAGGAAAGTGAAGTGCCTCAAATGTGCTTGGACTTGTACATGGAACATGGGACAACCATGGCTGGACTTAAGGTATAAGGCTTTTAATACCATATATTAATTATCACTTGGAGATACTAGAGTTTGCAACTAGGGTTACTAGAGTTTGTTTAATATCGTTTTGGTTTTTtCTTTAAGGGTTTAGGGAACACTTTGGTTTTTGTAAAGAAGAAACAAATTTGTTTAATAATCATTCTCATTTTTTTCCTAACTTCTAGAAATCTTTTAGAGCTAAATTTTGGGAAACTAACATAAAAATGCTTCTAAATGGTATTAAAATAAATATGAGTATGGTCAATTTTCTGATCTAAATGTTTTAATTACAAGTCATGTACACGAAAATAAATTCATATCATGTTATGCAATAAATTAACAAATTGTTTGCAATTTTAATTTACAAAATTTGATTCATAACTAAAAAATTAATCTAGTTAACTAATGTAAGTTCAAACATCATTTAATATAAATTATTGATGTGAGATTGTCCATCAAATTTGAACAGAATTCAAATGAATTTATCCTTAACTATTTTTGGCTGGGCTTGATATACATTTTtAGGATAATTATAATAGATAATAATTTTAGAAATAGTAAAAATAAGTATACAACGTTATTTTTGTAAAGTTACAAATATATCAAAATCTATAAGTTATATATTATAATGATCCATCGATAATAAATAAATATTTGCAACAAAAACACATTAGCGTGTATGAATATGAAATGATGGATGATAGTGTTATGGAATATGATATGAGTGAATTAGTTATATTTGACAAGATCGGTCGAATTTAAATAATGATGTGAGGGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATaTaTTaGTTaagTTTacgTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtAgTAtagTATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTATGTTAtGTTTCAGGCTCTTGGTTATGAATTTGACAACGAGGAGTTTCATGGGTATGTGCATGGTGCCTTACCTTACGACTCATTGAAGCCTGATCCTGTTTTGAGGAACCTCCTTCTTTCCTTGCCACAACGCAAAATTGTAAGCAAACCACAAACAATATATTACATCATCATCCCATAGTATATAATATTTCACAATTACATTGACTCTTTTTTTtAACTGTTCGTTATTTAAATTCTCTACGTATATCTCACTCTTTACTAGTGCTGAGGATCTCTTACTAAAATTATATATATATCAAAAGACGTTTATAATTATACATAAACTACTTCTCTTGTTGTAACTTTGATTTTAAGATAAAATGGGGTCTCATCAACTTTCTCCAAAATCCAAATTTGATCTTATAAAGAAACCCAGTGAAAAAGAAAACTATTTGCAGAGAACAAGTTAGAAAAGTTAAAAATCTCACGTTCTCGTTGGGATTATTGGTAAAATATTAAAAATGCGGTTGTTTCACATCGATTATTTTGTAGAAAGGTGGGGTATCTTCAAGCCTTTAAAACTTTGAGTCGGTAAAAGGAGTCTACCTTATTTGTTTAAAAAGGTTTCAATTAAAGCACTTTAAGTTTTAGCATGCAAACTCTCGTTAAATTTCTTTTGTATTCTAATTTAAGGTGGATATAAAAGGTATGAGTGACTGAAAGCTTTCTATAGCTTTCTATTCAGAGTATGTTTTTTGTATTAGGACTAGGAGTGAGTAAATCATTATGTGTGCACATAGTAGATTTCTCCGTTCTAGAATTTTGTCACAAGTTCTCTAATAGTTGTTAATTGTTAATGGGTGTTTTTCTCATAACTTGCATGCTAATAATTATTATCCTTATTGTTTGGATGCATATGCAGATCTTCACTAATGCTGAGAAAGGCCATGCAGCTCAAGTTCTTGAAAGGTTGGATTTGGAAGATTGTTTTGAAGGTGTCATATGCTTCGAAATTCTTAATAACAACAACAACAACCCGTCGTTAGAAAGCAAATTTAATGGCGGCAATGACATTATCATTTGCAAGCCATCCATTGAAGCCATTCAAGCTGCTGTCAAAATTGCTGATACTCAACCCAACAAAACGGTAATAAATTAAAGAAAACCACCCATCATATATTTCTTCCTCTTAAATTACTTTATTTTCAATCATTCCAAAAACAAGAAACCTCACTCTCATTAATAGGATAGATAAGCTTTTTTTtCTTTTTTTtGTTAATTGAGACTTCATCCCATATTATTTGATATGGTATACACGAACCACATAAATTTGTTTGTCGTTCTTCTTCTTTGTTTCGAAACGCCAAGAAATTAAACCTCACTCTCATTAAGAATCCCTTTATCCTCTCGTAACTTTtCTTTTCCATCCCAGATCTTTTTCGATGACAGTGTTCGAAATATGGAGAATGGAAAAGCAGCAGGCCTTCATACAGTTATAGTAAGTGTGTATTATATATTTAATTTGTTTGGTCTTCAGCCTTCAGAAGCGGGCAGGATCTAAGCAATTAATTTATCTTTTCTTCAATGCCACATCCTCTTTACCGCAGGTTGGAAGCTGAGAGTTGGTCCCCGGAGCTGACCATGCCTTAGGTAGCATTCACAATATAAAAGAGGCATTGCCAGAGTTATGGGAAGACGAAGATGAGAACGACCAGCCAGAGCAAGCTATGCAGGCCCCTGTAGTTGAAACTATGGTCCTTGTATAG ATGGATGCTGTTAAGATGTCCAATGGAAGCTCCAAATATGAGTGTTTGTTATTTGATATGGATGATACTTTGTACCCAAGAAGTTGTGGAATCAACCTAGCATGCCGTAAGAAAATTGAAGAGTATATGTTGAAGTATTTGCATATGGAGGAAAGTGAAGTGCCTCAAATGTGCTTGGACTTGTACATGGAACATGGGACAACCATGGCTGGACTTAAGGCTCTTGGTTATGAATTTGACAACGAGGAGTTTCATGGGTATGTGCATGGTGCCTTACCTTACGACTCATTGAAGCCTGATCCTGTTTTGAGGAACCTCCTTCTTTCCTTGCCACAACGCAAAATTATCTTCACTAATGCTGAGAAAGGCCATGCAGCTCAAGTTCTTGAAAGGTTGGATTTGGAAGATTGTTTTGAAGGTGTCATATGCTTCGAAATTCTTAATAACAACAACAACAACCCGTCGTTAGAAAGCAAATTTAATGGCGGCAATGACATTATCATTTGCAAGCCATCCATTGAAGCCATTCAAGCTGCTGTCAAAATTGCTGATACTCAACCCAACAAAACGATCTTTTTCGATGACAGTGTTCGAAATATGGAGAATGGAAAAGCAGCAGGCCTTCATACAGTTATATTGGTCCCCGGAGCTGACCATGCCTTAGGTAGCATTCACAATATAAAAGAGGCATTGCCAGAGTTATGGGAAGACGAAGATGAGAACGACCAGCCAGAGCAAGCTATGCAGGCCCCTGTAGTTGAAACTATGGTCCTTGTATAG ATGGATGCTGTTAAGATGTCCAATGGAAGCTCCAAATATGAGTGTTTGTTATTTGATATGGATGATACTTTGTACCCAAGAAGTTGTGGAATCAACCTAGCATGCCGTAAGAAAATTGAAGAGTATATGTTGAAGTATTTGCATATGGAGGAAAGTGAAGTGCCTCAAATGTGCTTGGACTTGTACATGGAACATGGGACAACCATGGCTGGACTTAAGGCTCTTGGTTATGAATTTGACAACGAGGAGTTTCATGGGTATGTGCATGGTGCCTTACCTTACGACTCATTGAAGCCTGATCCTGTTTTGAGGAACCTCCTTCTTTCCTTGCCACAACGCAAAATTATCTTCACTAATGCTGAGAAAGGCCATGCAGCTCAAGTTCTTGAAAGGTTGGATTTGGAAGATTGTTTTGAAGGTGTCATATGCTTCGAAATTCTTAATAACAACAACAACAACCCGTCGTTAGAAAGCAAATTTAATGGCGGCAATGACATTATCATTTGCAAGCCATCCATTGAAGCCATTCAAGCTGCTGTCAAAATTGCTGATACTCAACCCAACAAAACGATCTTTTTCGATGACAGTGTTCGAAATATGGAGAATGGAAAAGCAGCAGGCCTTCATACAGTTATATTGGTCCCCGGAGCTGACCATGCCTTAGGTAGCATTCACAATATAAAAGAGGCATTGCCAGAGTTATGGGAAGACGAAGATGAGAACGACCAGCCAGAGCAAGCTATGCAGGCCCCTGTAGTTGAAACTATGGTCCTTGTATAG MDAVKMSNGSSKYECLLFDMDDTLYPRSCGINLACRKKIEEYMLKYLHMEESEVPQMCLDLYMEHGTTMAGLKALGYEFDNEEFHGYVHGALPYDSLKPDPVLRNLLLSLPQRKIIFTNAEKGHAAQVLERLDLEDCFEGVICFEILNNNNNNPSLESKFNGGNDIIICKPSIEAIQAAVKIADTQPNKTIFFDDSVRNMENGKAAGLHTVILVPGADHALGSIHNIKEALPELWEDEDENDQPEQAMQAPVVETMVLV*
BLAST of Cucsa.374250 vs. Swiss-Prot
Match: YAI5_SCHPO (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14 Identity = 70/233 (30.04%), Postives = 109/233 (46.78%), Query Frame = 1
BLAST of Cucsa.374250 vs. Swiss-Prot
Match: SDT1_YEAST (Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.7e-14 Identity = 61/202 (30.20%), Postives = 98/202 (48.51%), Query Frame = 1
BLAST of Cucsa.374250 vs. TrEMBL
Match: A0A0A0KJ84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G128280 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.0e-102 Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of Cucsa.374250 vs. TrEMBL
Match: A0A0J8CER1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102470 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 3.7e-96 Identity = 178/262 (67.94%), Postives = 213/262 (81.30%), Query Frame = 1
BLAST of Cucsa.374250 vs. TrEMBL
Match: A0A151SS69_CAJCA (Uncharacterized protein C24B11.05 OS=Cajanus cajan GN=KK1_003873 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 4.9e-96 Identity = 180/264 (68.18%), Postives = 209/264 (79.17%), Query Frame = 1
BLAST of Cucsa.374250 vs. TrEMBL
Match: F6HZF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02420 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95 Identity = 187/288 (64.93%), Postives = 218/288 (75.69%), Query Frame = 1
BLAST of Cucsa.374250 vs. TrEMBL
Match: A0A058ZY82_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00553 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95 Identity = 183/282 (64.89%), Postives = 218/282 (77.30%), Query Frame = 1
BLAST of Cucsa.374250 vs. TAIR10
Match: AT3G62040.1 (AT3G62040.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 323.6 bits (828), Expect = 1.2e-88 Identity = 163/258 (63.18%), Postives = 197/258 (76.36%), Query Frame = 1
BLAST of Cucsa.374250 vs. TAIR10
Match: AT5G02230.1 (AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 261.5 bits (667), Expect = 5.4e-70 Identity = 129/249 (51.81%), Postives = 178/249 (71.49%), Query Frame = 1
BLAST of Cucsa.374250 vs. TAIR10
Match: AT5G59480.1 (AT5G59480.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 257.3 bits (656), Expect = 1.0e-68 Identity = 130/269 (48.33%), Postives = 180/269 (66.91%), Query Frame = 1
BLAST of Cucsa.374250 vs. TAIR10
Match: AT5G59490.1 (AT5G59490.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 252.3 bits (643), Expect = 3.3e-67 Identity = 124/244 (50.82%), Postives = 172/244 (70.49%), Query Frame = 1
BLAST of Cucsa.374250 vs. TAIR10
Match: AT2G32150.1 (AT2G32150.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 197.6 bits (501), Expect = 9.5e-51 Identity = 93/230 (40.43%), Postives = 150/230 (65.22%), Query Frame = 1
BLAST of Cucsa.374250 vs. NCBI nr
Match: gi|778698550|ref|XP_011654559.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C24B11.05 [Cucumis sativus]) HSP 1 Score: 524.6 bits (1350), Expect = 9.6e-146 Identity = 259/264 (98.11%), Postives = 259/264 (98.11%), Query Frame = 1
BLAST of Cucsa.374250 vs. NCBI nr
Match: gi|659074583|ref|XP_008437682.1| (PREDICTED: uncharacterized protein C24B11.05 [Cucumis melo]) HSP 1 Score: 449.5 bits (1155), Expect = 3.9e-123 Identity = 224/247 (90.69%), Postives = 232/247 (93.93%), Query Frame = 1
BLAST of Cucsa.374250 vs. NCBI nr
Match: gi|700194613|gb|KGN49790.1| (hypothetical protein Csa_5G128280 [Cucumis sativus]) HSP 1 Score: 380.2 bits (975), Expect = 2.9e-102 Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of Cucsa.374250 vs. NCBI nr
Match: gi|731331557|ref|XP_010676721.1| (PREDICTED: suppressor of disruption of TFIIS [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 359.4 bits (921), Expect = 5.4e-96 Identity = 178/262 (67.94%), Postives = 213/262 (81.30%), Query Frame = 1
BLAST of Cucsa.374250 vs. NCBI nr
Match: gi|1012346416|gb|KYP57608.1| (Uncharacterized protein C24B11.05 [Cajanus cajan]) HSP 1 Score: 359.0 bits (920), Expect = 7.0e-96 Identity = 180/264 (68.18%), Postives = 209/264 (79.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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