Cucsa.364910 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.364910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ethylene-responsive transcription factor, putative
Location	scaffold03611 : 2360799 .. 2362407 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCAGCTCATTCTCGCTTCAAGTTCCGTGAACGCCGCTCCGTCACCGGGATCACTCTTCCGCCCGATTACGCCGCCCCAAGGATCCTCCGCATCTTCGTCACCGACTCCGACGCCACCGATACTTCCAGTAGCGACGACGACGACAACGACGACGCCCACCTCCTCCGCCTCGTCCGTCGCCACATCAACGAAATCCGCTTCCACGATTCGACGCACTCGAAACCCAACGAAATCCCGCCGACCAAGAAATTCCGCGGCGTCCGGCGGCGGCCCTGGGGGAAATTCGCGGCGGAGATTCGAGACCCGATCAAACGCACTAGAATCTGGCTAGGAACCTTTGATTCGCCAGAAGAAGCCGCAATCGTCTACGATCAAGCAGCGATTCGATTCCGAGGTCCTGATGCCTTAACGAACATCGTAAAGCCGCCGCCGCGGAATGTTCCGGCGGAGGAGATTTGTGATTCTTCAATGGAAATCACGGAGGACGGGGGAGGAATGCGTTGCTCTCCAACTTCGGTTCTGAGAGACGAGTATTGGAGGGCGACGGAAGTGTTGGGAGATGAGATGGAGTTAATGGATAATTACTACCGGGCGCCGAGGATATTTGTGGAGGAAAGGAGCTTACCGGAGACGGCGATGTTTTGTGGGGgTTTGTGGGAGGGTTCGGTGGATTTGGACGGAAATTTCGGGTCATGTAAATGGGATGTGGGTACCTGTTTTGAGTAAGAGGAGGATTCACCTTTTGCATTCACTGAGTCACTACAAACATCGACTCAACTAACTCCCATGTGGGTTACCTCTTTACATATTCAAACTTCCTTCATTCTTTTTTtAAAATGGAGTTTCAAATTTTTtAATTTCTTCAGTCTTTGGCTGTTGTATTTTAAAGTTTTTTtGGTTATTTGATATCTATGTACTATACATATTTTATTAGTGGTTAATATTCGACCAACTAGAGTTGGTTGATATGCATTCTCAAAATTCAAATAAGACTCAAATTTGTCGAAGAAATTGACACAAAAGCTAAGAGAATCAAACGATTGATACTTTTGAAAAAAAaTACTCTTTTGCTATGCCAAAAGTTTTAGTCAAAAGTTTCTTTCTAACTCTCTTTACTTTCTTCCTCTCTTGGCTTACTTTGTTTCATTCACAAATCAAGACACAATCCTTGTTTACAAGACGTGAGATCGTTAGAATTCAAGCAAAAATGATCCGTCTCAAATTTTAACTATTTTACATATTTCATAGTTTACTTTTTATCTCAAGGTAGTCTACCTGAAATATTTATTTAGAGAGTACATCTATCAGTAATTCTGGAGAATTCTAATTTACATATTTATGTCATATTGTAGATACTTTAATAAACTTTTAGAATAGTTGTATTGTACTCAGTCTTCTACTTTAACATAAATGATATCTTATTATTAGAGAAAGTTGTTTGATTTAACACGGTCTTATAATTAAAAaCATAAAAaTGATTTTAAAAAATTCACTTCAGGGAGCATTTGACTAGTAACAAAAATCAAAGAATCGAATTGAGTTGATACTAATTGTATGGAAGTAATTGGGAGAGTTGATACAAACAACGAAGTGAAAAATACAA

mRNA sequence

ATGTCTTCAGCTCATTCTCGCTTCAAGTTCCGTGAACGCCGCTCCGTCACCGGGATCACTCTTCCGCCCGATTACGCCGCCCCAAGGATCCTCCGCATCTTCGTCACCGACTCCGACGCCACCGATACTTCCAGTAGcgacgacgacgacaacgacgacgCCCACCTCCTCCGCCTCGTCCGTCGCCACATCAACGAAATCCGCTTCCACGATTCGACGCACTCGAAACCCAACGAAATCCCGCCGACCAAGAAATTCCGCGGCGTCCGGCGGCGGCCCTGGGGGAAATTCGCGGCGGAGATTCGAGACCCGATCAAACGCACTAGAATCTGGCTAGGAACCTTTGATTCGCCAGAAGAAGCCGCAATCGTCTACGATCAAGCAGCGATTCGATTCCGAGGTCCTGATGCCTTAACGAACATCGTAAAGCCGCCGCCGCGGAATGTTCCGGCGGAGGAGATTTGTGATTCTTCAATGGAAATCACGGAGGACGGGGGAGGAATGCGTTGCTCTCCAACTTCGGTTCTGAGAGACGAGTATTGGAGGGCGACGGAAGTGTTGGGAGATGAGATGGAGTTAATGGATAATTACTACCGGGCGCCGAGGATATTTGTGGAGGAAAGGAGCTTACCGGAGACGGCGATGTTTTGTGGGGGTTTGTGGGAGGGTTCGGTGGATTTGGACGGAAATTTCGGGTCATttgatactaattgtatggaagtaattgggagagttgatacaaacaacgaagtgaaaaatacaa

Coding sequence (CDS)

ATGTCTTCAGCTCATTCTCGCTTCAAGTTCCGTGAACGCCGCTCCGTCACCGGGATCACTCTTCCGCCCGATTACGCCGCCCCAAGGATCCTCCGCATCTTCGTCACCGACTCCGACGCCACCGATACTTCCAGTAGCGACGACGACGACAACGACGACGCCCACCTCCTCCGCCTCGTCCGTCGCCACATCAACGAAATCCGCTTCCACGATTCGACGCACTCGAAACCCAACGAAATCCCGCCGACCAAGAAATTCCGCGGCGTCCGGCGGCGGCCCTGGGGGAAATTCGCGGCGGAGATTCGAGACCCGATCAAACGCACTAGAATCTGGCTAGGAACCTTTGATTCGCCAGAAGAAGCCGCAATCGTCTACGATCAAGCAGCGATTCGATTCCGAGGTCCTGATGCCTTAACGAACATCGTAAAGCCGCCGCCGCGGAATGTTCCGGCGGAGGAGATTTGTGATTCTTCAATGGAAATCACGGAGGACGGGGGAGGAATGCGTTGCTCTCCAACTTCGGTTCTGAGAGACGAGTATTGGAGGGCGACGGAAGTGTTGGGAGATGAGATGGAGTTAATGGATAATTACTACCGGGCGCCGAGGATATTTGTGGAGGAAAGGAGCTTACCGGAGACGGCGATGTTTTGTGGGGgTTTGTGGGAGGGTTCGGTGGATTTGGACGGAAATTTCGGGTCATTTGATACTAATTGTATGGAAGTAATTGGGAGAGTTGATACAAACAACGAAGTGAAAAATACAA

Protein sequence

MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEYWRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGSFDTNCMEVIGRVDTNNEVKNTX

Homology

[Close]

BLAST of Cucsa.364910 vs. Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.1e-36
Identity = 92/207 (44.44%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 7   RFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINE 66
           R KF E R+VT +   P   +PR++RI VTD  ATD SSSDDDDN++  ++  V+R++ E
Sbjct: 7   RVKFTENRTVTNVAATPSNGSPRLVRITVTDPFATD-SSSDDDDNNNVTVVPRVKRYVKE 66

Query: 67  IRF-----------HDSTHSKPNEI---------PPTKKFRGVRRRPWGKFAAEIRDPIK 126
           IRF               H +   +            KK+RGVR+RPWGKFAAEIRDP  
Sbjct: 67  IRFCQGESSSSTAARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSS 126

Query: 127 RTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGG 186
           RTRIWLGTF + EEAAI YD+AAI  +GP ALTN + PP      +    S+ +   D  
Sbjct: 127 RTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSR 186

Query: 187 GMRCSPTSVLRDEYWRATEVLGDEMEL 194
               SPTSVLR      TE   + +EL
Sbjct: 187 QSLHSPTSVLRFNVNEETEHEIEAIEL 212

[Close]

BLAST of Cucsa.364910 vs. Swiss-Prot
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 97/277 (35.02%), Postives = 136/277 (49.10%), Query Frame = 1


Query: 1   MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV 60
           M S   + K+   R +T     P    P+I++I VTD  ATD+SS  D++ND+  +   V
Sbjct: 1   MKSRVRKSKYTVHRKITST---PFDGFPKIVKIIVTDPCATDSSS--DEENDNKSVAPRV 60

Query: 61  RRHINEIRFHDSTHS-KPNEIPPTK-----------------KFRGVRRRPWGKFAAEIR 120
           +R+++EIRF D     KP      K                 K+RGVR+RPWGKFAAEIR
Sbjct: 61  KRYVDEIRFCDEDDEPKPARKAKKKSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIR 120

Query: 121 DPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNIVKPPP----RNVPAEEICD-- 180
           DP  RTR+WLGTF + EEAAI YD+AAIR +G +A TN + PPP      +P   + D  
Sbjct: 121 DPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLE 180

Query: 181 --SSMEITEDGGGMRCSPTSVLRDEYWRATEVLGDEMELMDNYYRAPRIFVEERSLPETA 240
             S  +   +     CSPTSVLR  +   TE   +  E  + ++           LP+  
Sbjct: 181 TVSGCDSARESQISLCSPTSVLRFSHNDETEYRTEPTEEQNPFF-----------LPDLF 240

Query: 241 MFCGGLWEGSVDLDGNFGSFDTNCMEVIGRVDTNNEV 252
                 W+  +  D  F   D     ++  ++ NN V
Sbjct: 241 RSGDYFWDSEITPDPLF--LDEFHQSLLPNINNNNTV 259

[Close]

BLAST of Cucsa.364910 vs. Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 83/203 (40.89%), Postives = 122/203 (60.10%), Query Frame = 1


Query: 29  RILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINEIRFHDSTHS----KPNEIPPT- 88
           R++RI +TD+DATD+S     D++  + +R V+RH+ EI    ST S    K   + P  
Sbjct: 36  RVVRIILTDADATDSS-----DDEGRNTVRRVKRHVTEINLMPSTKSIGDRKRRSVSPDS 95

Query: 89  -----KKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDAL 148
                KKFRGVR+RPWG++AAEIRDP +  R+WLGT+D+PEEAA+VYD+AA++ +GPDA+
Sbjct: 96  DVTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAV 155

Query: 149 TNIVKPPPRNVPAE---EICDSSMEITEDGG-----GMRCSPTSVLRDEYWRATEVLG-D 208
           TN     P +  AE    + ++  E   DGG      +  SPTSVL D  +   + LG  
Sbjct: 156 TNF----PVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSVLCDNDFAPFDNLGFC 215

[Close]

BLAST of Cucsa.364910 vs. Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 6.1e-28
Identity = 90/206 (43.69%), Postives = 117/206 (56.80%), Query Frame = 1


Query: 9   KFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINEIR 68
           K+ ++ S+   T   D A  R++R+ +TD DATD+SS   D+ +     R V+R INEIR
Sbjct: 23  KYTKKSSMERKTSVRDSA--RLVRVSMTDRDATDSSS---DEEEFLFPRRRVKRLINEIR 82

Query: 69  FH----------------------DSTHSKPNEIPPT-KKFRGVRRRPWGKFAAEIRDPI 128
                                   DST  KP+      KK+RGVR+RPWGK+AAEIRDP 
Sbjct: 83  VEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPE 142

Query: 129 KRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNI-VKPPPRNVPAEE---ICDSSMEI 186
           +R RIWLGTF + EEAAIVYD AAI+ RGPDALTN  V+P P  V  +E     + S+ I
Sbjct: 143 QRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSI 202

[Close]

BLAST of Cucsa.364910 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.0e-27
Identity = 85/225 (37.78%), Postives = 112/225 (49.78%), Query Frame = 1


Query: 7   RFKFRERRS--VTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHL--LRLVRR 66
           R KF E ++   T ++   +    RILRI VTD DATD+SS D+++     +   R V++
Sbjct: 11  RIKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKK 70

Query: 67  HINEIRF------------------------HDSTHSKPNEIPPT----KKFRGVRRRPW 126
            +NE+                           +ST S       T    KKFRGVR+RPW
Sbjct: 71  FVNEVYLDSGAVVTGSCGQMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPW 130

Query: 127 GKFAAEIRDPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNI----------VKP 181
           GK+AAEIRDP+KR R+WLGT+++ EEAA+VYD AAI+ RGPDALTN             P
Sbjct: 131 GKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAP 190

[Close]

BLAST of Cucsa.364910 vs. TrEMBL
Match: A0A0A0KE47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042450 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 2.9e-133
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1


Query: 1   MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV 60
           MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV
Sbjct: 1   MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV 60

Query: 61  RRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE 120
           RRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE
Sbjct: 61  RRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE 120

Query: 121 AAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEY 180
           AAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEY
Sbjct: 121 AAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEY 180

Query: 181 WRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGS 234
           WRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGS
Sbjct: 181 WRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGS 233

[Close]

BLAST of Cucsa.364910 vs. TrEMBL
Match: A0A078C6E0_BRANA (BnaC08g31500D protein OS=Brassica napus GN=BnaC08g31500D PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.6e-37
Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = 1


Query: 7   RFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDND-DAHLLRLVRRHIN 66
           R KF E   VT +   P   +PR++RI  TD  ATD+SS DDDDN+ +  +   V+R++ 
Sbjct: 7   RVKFTEHHKVTPVPAKPSNDSPRVVRIAYTDPFATDSSSDDDDDNNSNVTVAPRVKRYVE 66

Query: 67  EIRFHDSTHSKPNEIPP---------TKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFD 126
           EIRF ++  S   +              K+RGVRRRPWGKFAAEIRDP  R+R+WLGTF 
Sbjct: 67  EIRFGETKSSSSRKARKGGNDDVSANPVKYRGVRRRPWGKFAAEIRDPSSRSRVWLGTFV 126

Query: 127 SPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVL 186
           + EEAA+VYD+AAI+FRG +A TN + PPP   P+  I   ++   + G     SPTSVL
Sbjct: 127 TAEEAAMVYDRAAIKFRGHNAQTNFLTPPPPPSPSPVIDLETVSGCDSGSQSLRSPTSVL 186

Query: 187 RDEYWRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWE 223
           R  +   TEV  + +EL      A  +F +  SLP+  +     W+
Sbjct: 187 RFNFNEKTEVEIEPIELSSEVEPA-SLFPDPYSLPDLCLAGEYFWD 231

[Close]

BLAST of Cucsa.364910 vs. TrEMBL
Match: A0A0D3DUW2_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.6e-37
Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = 1


Query: 7   RFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDND-DAHLLRLVRRHIN 66
           R KF E   VT +   P   +PR++RI  TD  ATD+SS DDDDN+ +  +   V+R++ 
Sbjct: 7   RVKFTEHHKVTPVPAKPSNDSPRVVRIAYTDPFATDSSSDDDDDNNSNVTVAPRVKRYVE 66

Query: 67  EIRFHDSTHSKPNEIPP---------TKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFD 126
           EIRF ++  S   +              K+RGVRRRPWGKFAAEIRDP  R+R+WLGTF 
Sbjct: 67  EIRFGETKSSSSRKARKGGNDDVSANPVKYRGVRRRPWGKFAAEIRDPSSRSRVWLGTFV 126

Query: 127 SPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVL 186
           + EEAA+VYD+AAI+FRG +A TN + PPP   P+  I   ++   + G     SPTSVL
Sbjct: 127 TAEEAAMVYDRAAIKFRGHNAQTNFLTPPPPPSPSPVIDLETVSGCDSGSQSLRSPTSVL 186

Query: 187 RDEYWRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWE 223
           R  +   TEV  + +EL      A  +F +  SLP+  +     W+
Sbjct: 187 RFNFNEKTEVEIEPIELSSEVEPA-SLFPDPYSLPDLCLAGEYFWD 231

[Close]

BLAST of Cucsa.364910 vs. TrEMBL
Match: A0A067K8B3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14296 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.6e-36
Identity = 107/286 (37.41%), Postives = 152/286 (53.15%), Query Frame = 1


Query: 6   SRFKFRERRSVTGITLP-PDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHI 65
           S  K+ E ++VT   +   D  A RI+RI VTD DATD+SS   D+N+++   + V++HI
Sbjct: 16  SSVKYSEHKTVTNKLVKFNDSNATRIVRICVTDGDATDSSS---DENEESRTHQRVKKHI 75

Query: 66  NEIRFHDSTHSKPNE-----------------------IPPTKKFRGVRRRPWGKFAAEI 125
           NEIR  D    +  E                        P  KK+RGVR+RPWG+FAAEI
Sbjct: 76  NEIRIEDCVKYRATEKGEVKLGFNKQQQQRKNTRDQRYYPEGKKYRGVRQRPWGRFAAEI 135

Query: 126 RDPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEI 185
           RDP +RTRIWLGTFD+ EEAA+VYD+AAI+ +G +ALTN +KPP R+ P +    +  + 
Sbjct: 136 RDPSRRTRIWLGTFDTAEEAAMVYDKAAIQIKGTNALTNFIKPPVRSPPPDVDITNGYDS 195

Query: 186 TEDGGGMRCSPTSVLRDEY--------------------WRATEVLGDEM---ELMDNY- 234
            ++      SPTSVLR +Y                    WR  E L +++   + + N  
Sbjct: 196 CKEETHSLSSPTSVLRFQYNEEGANDENWESDQVKQVKDWRQPEELREDLAGEDCLANLG 255

[Close]

BLAST of Cucsa.364910 vs. TrEMBL
Match: A0A0A0L397_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120390 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-35
Identity = 99/217 (45.62%), Postives = 125/217 (57.60%), Query Frame = 1


Query: 9   KFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINEIR 68
           KFRE R+VT        A  +++RI  TD+DATD+SS +D++     L+R V+RH+ EIR
Sbjct: 17  KFRETRTVTH----KPAAETKLVRISYTDADATDSSSGEDEE---PILVRHVKRHVTEIR 76

Query: 69  FHDSTHSK----------PNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSP 128
              +  SK          P      +KFRGVRRRPWGK+AAEIRDP++RTR+WLGT+D+ 
Sbjct: 77  LLTTDCSKKAPPKSRANPPRNSESHRKFRGVRRRPWGKWAAEIRDPLRRTRVWLGTYDTA 136

Query: 129 EEAAIVYDQAAIRFRGPDALTNIV---------------KPPPRNVPAEEICDSSMEITE 188
           EEAA+VYDQAA+R RGP ALTN V                PPP N  A      + E   
Sbjct: 137 EEAAVVYDQAAVRLRGPSALTNFVAETPHSETTLVTYLTPPPPENQSAAAAVSETKE--- 196

Query: 189 DGGGMRCSPTSVLR--DEYWRATE-VLGDEMELMDNY 198
                 CSPTSVLR  DE WRA +  L +E  L D +
Sbjct: 197 --SRSICSPTSVLRLEDENWRAIDHYLSEESGLEDEF 221

[Close]

BLAST of Cucsa.364910 vs. TAIR10
Match: AT3G61630.1 (AT3G61630.1 cytokinin response factor 6)

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-37
Identity = 92/207 (44.44%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 7   RFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINE 66
           R KF E R+VT +   P   +PR++RI VTD  ATD SSSDDDDN++  ++  V+R++ E
Sbjct: 7   RVKFTENRTVTNVAATPSNGSPRLVRITVTDPFATD-SSSDDDDNNNVTVVPRVKRYVKE 66

Query: 67  IRF-----------HDSTHSKPNEI---------PPTKKFRGVRRRPWGKFAAEIRDPIK 126
           IRF               H +   +            KK+RGVR+RPWGKFAAEIRDP  
Sbjct: 67  IRFCQGESSSSTAARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSS 126

Query: 127 RTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGG 186
           RTRIWLGTF + EEAAI YD+AAI  +GP ALTN + PP      +    S+ +   D  
Sbjct: 127 RTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSR 186

Query: 187 GMRCSPTSVLRDEYWRATEVLGDEMEL 194
               SPTSVLR      TE   + +EL
Sbjct: 187 QSLHSPTSVLRFNVNEETEHEIEAIEL 212

[Close]

BLAST of Cucsa.364910 vs. TAIR10
Match: AT2G46310.1 (AT2G46310.1 cytokinin response factor 5)

HSP 1 Score: 134.4 bits (337), Expect = 9.7e-32
Identity = 97/277 (35.02%), Postives = 136/277 (49.10%), Query Frame = 1


Query: 1   MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV 60
           M S   + K+   R +T     P    P+I++I VTD  ATD+SS  D++ND+  +   V
Sbjct: 1   MKSRVRKSKYTVHRKITST---PFDGFPKIVKIIVTDPCATDSSS--DEENDNKSVAPRV 60

Query: 61  RRHINEIRFHDSTHS-KPNEIPPTK-----------------KFRGVRRRPWGKFAAEIR 120
           +R+++EIRF D     KP      K                 K+RGVR+RPWGKFAAEIR
Sbjct: 61  KRYVDEIRFCDEDDEPKPARKAKKKSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIR 120

Query: 121 DPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNIVKPPP----RNVPAEEICD-- 180
           DP  RTR+WLGTF + EEAAI YD+AAIR +G +A TN + PPP      +P   + D  
Sbjct: 121 DPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLE 180

Query: 181 --SSMEITEDGGGMRCSPTSVLRDEYWRATEVLGDEMELMDNYYRAPRIFVEERSLPETA 240
             S  +   +     CSPTSVLR  +   TE   +  E  + ++           LP+  
Sbjct: 181 TVSGCDSARESQISLCSPTSVLRFSHNDETEYRTEPTEEQNPFF-----------LPDLF 240

Query: 241 MFCGGLWEGSVDLDGNFGSFDTNCMEVIGRVDTNNEV 252
                 W+  +  D  F   D     ++  ++ NN V
Sbjct: 241 RSGDYFWDSEITPDPLF--LDEFHQSLLPNINNNNTV 259

[Close]

BLAST of Cucsa.364910 vs. TAIR10
Match: AT4G27950.1 (AT4G27950.1 cytokinin response factor 4)

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29
Identity = 90/206 (43.69%), Postives = 117/206 (56.80%), Query Frame = 1


Query: 9   KFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINEIR 68
           K+ ++ S+   T   D A  R++R+ +TD DATD+SS   D+ +     R V+R INEIR
Sbjct: 23  KYTKKSSMERKTSVRDSA--RLVRVSMTDRDATDSSS---DEEEFLFPRRRVKRLINEIR 82

Query: 69  FH----------------------DSTHSKPNEIPPT-KKFRGVRRRPWGKFAAEIRDPI 128
                                   DST  KP+      KK+RGVR+RPWGK+AAEIRDP 
Sbjct: 83  VEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPE 142

Query: 129 KRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNI-VKPPPRNVPAEE---ICDSSMEI 186
           +R RIWLGTF + EEAAIVYD AAI+ RGPDALTN  V+P P  V  +E     + S+ I
Sbjct: 143 QRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSI 202

[Close]

BLAST of Cucsa.364910 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-28
Identity = 85/225 (37.78%), Postives = 112/225 (49.78%), Query Frame = 1


Query: 7   RFKFRERRS--VTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHL--LRLVRR 66
           R KF E ++   T ++   +    RILRI VTD DATD+SS D+++     +   R V++
Sbjct: 11  RIKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKK 70

Query: 67  HINEIRF------------------------HDSTHSKPNEIPPT----KKFRGVRRRPW 126
            +NE+                           +ST S       T    KKFRGVR+RPW
Sbjct: 71  FVNEVYLDSGAVVTGSCGQMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPW 130

Query: 127 GKFAAEIRDPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNI----------VKP 181
           GK+AAEIRDP+KR R+WLGT+++ EEAA+VYD AAI+ RGPDALTN             P
Sbjct: 131 GKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAP 190

[Close]

BLAST of Cucsa.364910 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 122.9 bits (307), Expect = 2.9e-28
Identity = 78/175 (44.57%), Postives = 102/175 (58.29%), Query Frame = 1


Query: 28  PRILRIFVTDSDATDTSSSDDDDNDDAHLL---RLVRRHINEIRFHD--STHSKPNE--- 87
           PRILRI VTD  ATD+SS ++++ D   L    R V++++ E+      S   KP +   
Sbjct: 10  PRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKR 69

Query: 88  ------IP-----PTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAAIVYDQA 147
                 +P      T+KFRGVR+RPWGK+AAEIRDP +R R+WLGTFD+ EEAAIVYD A
Sbjct: 70  KKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNA 129

Query: 148 AIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITE---DGGGMRCSPTSVLRDEY 181
           AI+ RGP+A  N   PPP     EE       +++    GG    SP SVL   +
Sbjct: 130 AIQLRGPNAELNF-PPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVLESPF 183

[Close]

BLAST of Cucsa.364910 vs. NCBI nr
Match: gi|778710334|ref|XP_011656563.1| (PREDICTED: ethylene-responsive transcription factor CRF6-like [Cucumis sativus])

HSP 1 Score: 482.6 bits (1241), Expect = 4.1e-133
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1


Query: 1   MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV 60
           MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV
Sbjct: 1   MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV 60

Query: 61  RRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE 120
           RRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE
Sbjct: 61  RRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE 120

Query: 121 AAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEY 180
           AAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEY
Sbjct: 121 AAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEY 180

Query: 181 WRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGS 234
           WRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGS
Sbjct: 181 WRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGS 233

[Close]

BLAST of Cucsa.364910 vs. NCBI nr
Match: gi|659090022|ref|XP_008445792.1| (PREDICTED: ethylene-responsive transcription factor CRF6-like [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 4.7e-121
Identity = 214/233 (91.85%), Postives = 221/233 (94.85%), Query Frame = 1


Query: 1   MSSAHSRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLV 60
           MSS HSRFKFRERRSVTGITLPPD AAPRILRIFVTDSDATDTSSSDDDD DDA LLRLV
Sbjct: 1   MSSTHSRFKFRERRSVTGITLPPDSAAPRILRIFVTDSDATDTSSSDDDD-DDAQLLRLV 60

Query: 61  RRHINEIRFHDSTHSKPNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE 120
           RRHINEI FHDSTHSKPNE+ PTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE
Sbjct: 61  RRHINEIHFHDSTHSKPNELQPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEE 120

Query: 121 AAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVLRDEY 180
           AAIVYDQAAIRFRGPDALTNI+KPP RN+P EEICDSSMEI EDGGGMRCSPTSVLRD+Y
Sbjct: 121 AAIVYDQAAIRFRGPDALTNIIKPPQRNLPPEEICDSSMEIAEDGGGMRCSPTSVLRDDY 180

Query: 181 WRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWEGSVDLDGNFGS 234
           W ATE+LGDEME MDNYY APRIFVEERS+PETAMFCGGLWEG+VDLDGNFGS
Sbjct: 181 WSATELLGDEMEFMDNYYGAPRIFVEERSIPETAMFCGGLWEGAVDLDGNFGS 232

[Close]

BLAST of Cucsa.364910 vs. NCBI nr
Match: gi|922548824|ref|XP_013602393.1| (PREDICTED: ethylene-responsive transcription factor CRF6 [Brassica oleracea var. oleracea])

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = 1


Query: 7   RFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDND-DAHLLRLVRRHIN 66
           R KF E   VT +   P   +PR++RI  TD  ATD+SS DDDDN+ +  +   V+R++ 
Sbjct: 7   RVKFTEHHKVTPVPAKPSNDSPRVVRIAYTDPFATDSSSDDDDDNNSNVTVAPRVKRYVE 66

Query: 67  EIRFHDSTHSKPNEIPP---------TKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFD 126
           EIRF ++  S   +              K+RGVRRRPWGKFAAEIRDP  R+R+WLGTF 
Sbjct: 67  EIRFGETKSSSSRKARKGGNDDVSANPVKYRGVRRRPWGKFAAEIRDPSSRSRVWLGTFV 126

Query: 127 SPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEITEDGGGMRCSPTSVL 186
           + EEAA+VYD+AAI+FRG +A TN + PPP   P+  I   ++   + G     SPTSVL
Sbjct: 127 TAEEAAMVYDRAAIKFRGHNAQTNFLTPPPPPSPSPVIDLETVSGCDSGSQSLRSPTSVL 186

Query: 187 RDEYWRATEVLGDEMELMDNYYRAPRIFVEERSLPETAMFCGGLWE 223
           R  +   TEV  + +EL      A  +F +  SLP+  +     W+
Sbjct: 187 RFNFNEKTEVEIEPIELSSEVEPA-SLFPDPYSLPDLCLAGEYFWD 231

[Close]

BLAST of Cucsa.364910 vs. NCBI nr
Match: gi|802694779|ref|XP_012083262.1| (PREDICTED: ethylene-responsive transcription factor CRF6 [Jatropha curcas])

HSP 1 Score: 159.5 bits (402), Expect = 8.0e-36
Identity = 107/286 (37.41%), Postives = 152/286 (53.15%), Query Frame = 1


Query: 6   SRFKFRERRSVTGITLP-PDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHI 65
           S  K+ E ++VT   +   D  A RI+RI VTD DATD+SS   D+N+++   + V++HI
Sbjct: 16  SSVKYSEHKTVTNKLVKFNDSNATRIVRICVTDGDATDSSS---DENEESRTHQRVKKHI 75

Query: 66  NEIRFHDSTHSKPNE-----------------------IPPTKKFRGVRRRPWGKFAAEI 125
           NEIR  D    +  E                        P  KK+RGVR+RPWG+FAAEI
Sbjct: 76  NEIRIEDCVKYRATEKGEVKLGFNKQQQQRKNTRDQRYYPEGKKYRGVRQRPWGRFAAEI 135

Query: 126 RDPIKRTRIWLGTFDSPEEAAIVYDQAAIRFRGPDALTNIVKPPPRNVPAEEICDSSMEI 185
           RDP +RTRIWLGTFD+ EEAA+VYD+AAI+ +G +ALTN +KPP R+ P +    +  + 
Sbjct: 136 RDPSRRTRIWLGTFDTAEEAAMVYDKAAIQIKGTNALTNFIKPPVRSPPPDVDITNGYDS 195

Query: 186 TEDGGGMRCSPTSVLRDEY--------------------WRATEVLGDEM---ELMDNY- 234
            ++      SPTSVLR +Y                    WR  E L +++   + + N  
Sbjct: 196 CKEETHSLSSPTSVLRFQYNEEGANDENWESDQVKQVKDWRQPEELREDLAGEDCLANLG 255

[Close]

BLAST of Cucsa.364910 vs. NCBI nr
Match: gi|778677038|ref|XP_004133833.2| (PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 2.3e-35
Identity = 99/217 (45.62%), Postives = 125/217 (57.60%), Query Frame = 1


Query: 9   KFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHINEIR 68
           KFRE R+VT        A  +++RI  TD+DATD+SS +D++     L+R V+RH+ EIR
Sbjct: 17  KFRETRTVTH----KPAAETKLVRISYTDADATDSSSGEDEE---PILVRHVKRHVTEIR 76

Query: 69  FHDSTHSK----------PNEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSP 128
              +  SK          P      +KFRGVRRRPWGK+AAEIRDP++RTR+WLGT+D+ 
Sbjct: 77  LLTTDCSKKAPPKSRANPPRNSESHRKFRGVRRRPWGKWAAEIRDPLRRTRVWLGTYDTA 136

Query: 129 EEAAIVYDQAAIRFRGPDALTNIV---------------KPPPRNVPAEEICDSSMEITE 188
           EEAA+VYDQAA+R RGP ALTN V                PPP N  A      + E   
Sbjct: 137 EEAAVVYDQAAVRLRGPSALTNFVAETPHSETTLVTYLTPPPPENQSAAAAVSETKE--- 196

Query: 189 DGGGMRCSPTSVLR--DEYWRATE-VLGDEMELMDNY 198
                 CSPTSVLR  DE WRA +  L +E  L D +
Sbjct: 197 --SRSICSPTSVLRLEDENWRAIDHYLSEESGLEDEF 221

The following BLAST results are available for this feature:

BLAST of Cucsa.364910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRF6_ARATH	6.1e-36	44.44	Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE...	[more]
CRF5_ARATH	1.7e-30	35.02	Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE...	[more]
PTI6_SOLLC	1.7e-30	40.89	Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicu...	[more]
CRF4_ARATH	6.1e-28	43.69	Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE...	[more]
CRF2_ARATH	4.0e-27	37.78	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE...	[more]

BLAST of Cucsa.364910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE47_CUCSA	2.9e-133	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042450 PE=4 SV=1	[more]
A0A078C6E0_BRANA	8.6e-37	42.48	BnaC08g31500D protein OS=Brassica napus GN=BnaC08g31500D PE=4 SV=1	[more]
A0A0D3DUW2_BRAOL	8.6e-37	42.48	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A067K8B3_JATCU	5.6e-36	37.41	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14296 PE=4 SV=1	[more]
A0A0A0L397_CUCSA	1.6e-35	45.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120390 PE=4 SV=1	[more]

BLAST of Cucsa.364910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61630.1	3.4e-37	44.44	cytokinin response factor 6	[more]
AT2G46310.1	9.7e-32	35.02	cytokinin response factor 5	[more]
AT4G27950.1	3.5e-29	43.69	cytokinin response factor 4	[more]
AT4G23750.1	2.2e-28	37.78	cytokinin response factor 2	[more]
AT4G11140.1	2.9e-28	44.57	cytokinin response factor 1	[more]

BLAST of Cucsa.364910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778710334\|ref\|XP_011656563.1\|	4.1e-133	100.00	PREDICTED: ethylene-responsive transcription factor CRF6-like [Cucumis sativus]	[more]
gi\|659090022\|ref\|XP_008445792.1\|	4.7e-121	91.85	PREDICTED: ethylene-responsive transcription factor CRF6-like [Cucumis melo]	[more]
gi\|922548824\|ref\|XP_013602393.1\|	1.2e-36	42.48	PREDICTED: ethylene-responsive transcription factor CRF6 [Brassica oleracea var....	[more]
gi\|802694779\|ref\|XP_012083262.1\|	8.0e-36	37.41	PREDICTED: ethylene-responsive transcription factor CRF6 [Jatropha curcas]	[more]
gi\|778677038\|ref\|XP_004133833.2\|	2.3e-35	45.62	PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Cucum...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf
IPR017392	AP2/ERF-transcript_factor

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.364910.1	Cucsa.364910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 108..124 score: 3.8E-9coord: 86..97 score: 3.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 85..140 score: 1.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 85..134 score: 2.4
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 85..148 score: 6.5
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 85..142 score: 21
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 85..141 score: 7.19
IPR017392	AP2/ERF transcription factor ERF/PTI6	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 26..179 score: 3.8
None	No IPR available	PANTHER	PTHR31194:SF0	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED	coord: 26..179 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.364910	Csa6G042450	Cucumber (Chinese Long) v2	cgycuB511
Cucsa.364910	MELO3C011671	Melon (DHL92) v3.5.1	cgymeB589
Cucsa.364910	CSPI06G03680	Wild cucumber (PI 183967)	cgycpiB540
Cucsa.364910	MELO3C011671.2	Melon (DHL92) v3.6.1	cgymedB588
Cucsa.364910	CsaV3_6G003960	Cucumber (Chinese Long) v3	cgycucB556
Cucsa.364910	Cla97C08G147180	Watermelon (97103) v2	cgywmbB628
Cucsa.364910	Bhi04G001614	Wax gourd	cgywgoB732

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None