Cucsa.362760 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TATGGAGCAAAGGAGGGTAGCAGAAGGGAAGGACTCACTTTTCTCAGGCGACTTCATGGGTGGTTTCCCCGGATTTGGTTTATTTGGATCACGTAGAGGTATGACACCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTTTTTACTCGCCCATTCGGTAGCATGTTCGAATCGAGTATATCCGGTTCCCATATTGCTGCTTACGATGAAGGGAAGAAAGATGGGGCACCGGAACTTGTGATTCAAGAAATATGCTCTGATGATGAGGAGAGGGAGGAAGATGATGACCTTAGGGATCAGAGACATGGCAGGAATGAGAATAATTCTAGGTCGGGCCAGGAGCCATCCGTTGAGCATCCTGATGATTCCAATGATGGTAATTGAGCTTTGATTTGAGGTCTATTATTTTCACAAACCACGTTAATGATTCCAATTTTACCATGCTTCGATTGTTTCATTGATTGACGTCCAGAGCGCCAGATAATGACTCAAAGAAGTAGTGAGAATAGTAGCTTTAGAGTTCAGCCAAAGGCTGGTAAATCCAGTATCCATTCATGCAAGGTCACGTATGGGGGTGTAGATGGAGCATACTACTCTTCGACCAGAACTAGAAGGGTTGACAATGAGGGAGTAAGTCAAGTTCTTGTGGAATAACTGTAAACTTTGAATGAAGTATATGGTATTAATAGCAGGTCTTGTGAATCAGGTATTGCTTGAAGAGACGAAAGAAGCAGATAAGACAACAGGTCAGGCCACTCATAGGGTCTCGAGAGGAATTCATGATAAGGTATGTATTGGAAATGGACTCTGACCTTTAATCGGAAATTCACCATTTGTCCTAGTCCTTGATTATCTTTTGGCTTGGCATTTAATGCATAAAACCTAGTAAACTCTAGGGACTTGTTCTGAAAATGTTTCCCCCTCCAAGTTTTCTGCTTGTTTGATACAAGTTTCGAGTGGTTTTCCCTTGTCAGTCGTGTGAAACCATGTAGCTAATACGAAAAGCTGTTGGAAAATTGCCTTTTGTCATGTTTGTAATCTAATCGTTAAGATCTAGAGAGCACCGATATTGTATTTTTCCAATTTTCATATAATGCAGTGTTTCGTACTCTCTGTTTTTTGTTTATTCTTTACGATATTTGCTTCTAATCTTTATTGCTTGAGGTATGACGAAGATATAGAAAGCTGGGGACTAAAACAGTTGCACTGCTTTTCAGGGTCATTCAGTTACGAGGAAACTGAACCCGGATGGCAAAGTGGACGTAGTTCAAACTCTGCATAATCTGGACGAAGGTCTGCTTTATCTATTCAACTATAATTAATAAAATCATCTTGGTTTCTTCATGTCGAAGCTATTACATCATGTCTTGTCGCACCACTTTCTTACAGGAGAGCTTCCTGGTTTTGAGCAAGCATGGAACGGCAATTTTCAAGGGCATAGACAGGTTCCAAATGCTGGATTCCATCACATGGATCCCAATTTTGGTAATTTGATTATCTAG TATGGAGCAAAGGAGGGTAGCAGAAGGGAAGGACTCACTTTTCTCAGGCGACTTCATGGAGGTATGACACCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTTTTTACTCGCCCATTCGGTAGCATGTTCGAATCGAGTATATCCGGTTCCCATATTGCTGCTTACGATGAAGGGAAGAAAGATGGGGCACCGGAACTTGTGATTCAAGAAATATGCTCTGATGATGAGGAGAGGGAGGAAGATGATGACCTTAGGGATCAGAGACATGGCAGGAATGAGAATAATTCTAGGTCGGGCCAGGAGCCATCCGTTGAGCATCCTGATGATTCCAATGATGAGCGCCAGATAATGACTCAAAGAAGTAGTGAGAATAGTAGCTTTAGAGTTCAGCCAAAGGCTGGTAAATCCAGTATCCATTCATGCAAGGTCACGTATGGGGGTGTAGATGGAGCATACTACTCTTCGACCAGAACTAGAAGGGTTGACAATGAGGGAGTATTGCTTGAAGAGACGAAAGAAGCAGATAAGACAACAGGTCAGGCCACTCATAGGGTCTCGAGAGGAATTCATGATAAGGGTCATTCAGTTACGAGGAAACTGAACCCGGATGGCAAAGTGGACGTAGTTCAAACTCTGCATAATCTGGACGAAGGAGAGCTTCCTGGTTTTGAGCAAGCATGGAACGGCAATTTTCAAGGGCATAGACAGGTTCCAAATGCTGGATTCCATCACATGGATCCCAATTTTGGTAATTTGATTATCTAG TATGGAGCAAAGGAGGGTAGCAGAAGGGAAGGACTCACTTTTCTCAGGCGACTTCATGGAGGTATGACACCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTTTTTACTCGCCCATTCGGTAGCATGTTCGAATCGAGTATATCCGGTTCCCATATTGCTGCTTACGATGAAGGGAAGAAAGATGGGGCACCGGAACTTGTGATTCAAGAAATATGCTCTGATGATGAGGAGAGGGAGGAAGATGATGACCTTAGGGATCAGAGACATGGCAGGAATGAGAATAATTCTAGGTCGGGCCAGGAGCCATCCGTTGAGCATCCTGATGATTCCAATGATGAGCGCCAGATAATGACTCAAAGAAGTAGTGAGAATAGTAGCTTTAGAGTTCAGCCAAAGGCTGGTAAATCCAGTATCCATTCATGCAAGGTCACGTATGGGGGTGTAGATGGAGCATACTACTCTTCGACCAGAACTAGAAGGGTTGACAATGAGGGAGTATTGCTTGAAGAGACGAAAGAAGCAGATAAGACAACAGGTCAGGCCACTCATAGGGTCTCGAGAGGAATTCATGATAAGGGTCATTCAGTTACGAGGAAACTGAACCCGGATGGCAAAGTGGACGTAGTTCAAACTCTGCATAATCTGGACGAAGGAGAGCTTCCTGGTTTTGAGCAAGCATGGAACGGCAATTTTCAAGGGCATAGACAGGTTCCAAATGCTGGATTCCATCACATGGATCCCAATTTTGGTAATTTGATTATCTAG YGAKEGSRREGLTFLRRLHGGMTPNLFGERDPFDDPFFTRPFGSMFESSISGSHIAAYDEGKKDGAPELVIQEICSDDEEREEDDDLRDQRHGRNENNSRSGQEPSVEHPDDSNDERQIMTQRSSENSSFRVQPKAGKSSIHSCKVTYGGVDGAYYSSTRTRRVDNEGVLLEETKEADKTTGQATHRVSRGIHDKGHSVTRKLNPDGKVDVVQTLHNLDEGELPGFEQAWNGNFQGHRQVPNAGFHHMDPNFGNLII*
BLAST of Cucsa.362760 vs. TrEMBL
Match: A0A0A0KBL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G077410 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 2.9e-109 Identity = 195/211 (92.42%), Postives = 196/211 (92.89%), Query Frame = 1
BLAST of Cucsa.362760 vs. TrEMBL
Match: B9IBZ3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s06470g PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.7e-62 Identity = 132/232 (56.90%), Postives = 161/232 (69.40%), Query Frame = 1
BLAST of Cucsa.362760 vs. TrEMBL
Match: A0A067K167_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14529 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 8.6e-61 Identity = 126/223 (56.50%), Postives = 153/223 (68.61%), Query Frame = 1
BLAST of Cucsa.362760 vs. TrEMBL
Match: B9RDC3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1611980 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60 Identity = 126/222 (56.76%), Postives = 154/222 (69.37%), Query Frame = 1
BLAST of Cucsa.362760 vs. TrEMBL
Match: A0A061DU40_THECC (Flower, cultured cell, putative OS=Theobroma cacao GN=TCM_046703 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.6e-60 Identity = 133/236 (56.36%), Postives = 158/236 (66.95%), Query Frame = 1
BLAST of Cucsa.362760 vs. TAIR10
Match: AT2G45380.1 (AT2G45380.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58 Identity = 125/235 (53.19%), Postives = 157/235 (66.81%), Query Frame = 1
BLAST of Cucsa.362760 vs. TAIR10
Match: AT4G22740.1 (AT4G22740.1 glycine-rich protein) HSP 1 Score: 172.2 bits (435), Expect = 4.3e-43 Identity = 100/260 (38.46%), Postives = 141/260 (54.23%), Query Frame = 1
BLAST of Cucsa.362760 vs. NCBI nr
Match: gi|659120291|ref|XP_008460115.1| (PREDICTED: uncharacterized protein LOC103499022 isoform X1 [Cucumis melo]) HSP 1 Score: 445.3 bits (1144), Expect = 7.4e-122 Identity = 214/234 (91.45%), Postives = 220/234 (94.02%), Query Frame = 1
BLAST of Cucsa.362760 vs. NCBI nr
Match: gi|778711197|ref|XP_011656700.1| (PREDICTED: uncharacterized protein LOC101221550 [Cucumis sativus]) HSP 1 Score: 402.9 bits (1034), Expect = 4.2e-109 Identity = 195/211 (92.42%), Postives = 196/211 (92.89%), Query Frame = 1
BLAST of Cucsa.362760 vs. NCBI nr
Match: gi|700191040|gb|KGN46244.1| (hypothetical protein Csa_6G077410 [Cucumis sativus]) HSP 1 Score: 402.9 bits (1034), Expect = 4.2e-109 Identity = 195/211 (92.42%), Postives = 196/211 (92.89%), Query Frame = 1
BLAST of Cucsa.362760 vs. NCBI nr
Match: gi|659120295|ref|XP_008460117.1| (PREDICTED: uncharacterized protein LOC103499022 isoform X2 [Cucumis melo]) HSP 1 Score: 400.2 bits (1027), Expect = 2.7e-108 Identity = 194/210 (92.38%), Postives = 199/210 (94.76%), Query Frame = 1
BLAST of Cucsa.362760 vs. NCBI nr
Match: gi|659120297|ref|XP_008460118.1| (PREDICTED: uncharacterized protein LOC103499022 isoform X3 [Cucumis melo]) HSP 1 Score: 370.9 bits (951), Expect = 1.8e-99 Identity = 181/211 (85.78%), Postives = 186/211 (88.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |