Cucsa.362290 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTCTTCCCTGCTTGTTCTTGTTCATGTTCTTCTCCAATTTCCCCATCACTCAATCTTCCAACAACAACAATACATCTTCCCTAATCTACAAAACTTGCAAAGCTAGCTCTGAGCAAGACCCCAACATCTCCTTCAATTTCTGCGTGACATCTCTCAAACCAGCGGCAACCAAGCACAGGCACGGTGACACCAGTCTCCGCCGCCTAGGCCTCATTACCATCTACTTGATTCGACACAACATGAGTAACACGCGCCACCATATCAAGAAGTACTTGCATAAAAaCAAAGGCCCCCGTGACCCGTTCGTTAAGTTGTGTTTGACTGATTGTTTGGAACTTTATTCCGATGCGATCCCGACGGTGAAGCAAGCAAGGAAGGACTACAAGGCCGGGCGATACGCGGATGCGAACTTGAAGATCAGCTCAGTTATGGATGATTGTTCAACATGTGAAGAGGGGTTCAAGGAGAAAGATGGGGTGATTTCACCATTGACTAATAGAAATCATAATGCCTTTGAATTGTCGGCTATTGCACTGTCCATTATCAATATGCTTTGTTGAGAAATTCCcTCCCCCcAAcAAAac CAATTCTTCCCTGCTTGTTCTTGTTCATGTTCTTCTCCAATTTCCCCATCACTCAATCTTCCAACAACAACAATACATCTTCCCTAATCTACAAAACTTGCAAAGCTAGCTCTGAGCAAGACCCCAACATCTCCTTCAATTTCTGCGTGACATCTCTCAAACCAGCGGCAACCAAGCACAGGCACGGTGACACCAGTCTCCGCCGCCTAGGCCTCATTACCATCTACTTGATTCGACACAACATGAGTAACACGCGCCACCATATCAAGAAGTACTTGCATAAAAACAAAGGCCCCCGTGACCCGTTCGTTAAGTTGTGTTTGACTGATTGTTTGGAACTTTATTCCGATGCGATCCCGACGGTGAAGCAAGCAAGGAAGGACTACAAGGCCGGGCGATACGCGGATGCGAACTTGAAGATCAGCTCAGTTATGGATGATTGTTCAACATGTGAAGAGGGGTTCAAGGAGAAAGATGGGGTGATTTCACCATTGACTAATAGAAATCATAATGCCTTTGAATTGTCGGCTATTGCACTGTCCATTATCAATATGCTTTGTTGAGAAATTCCCTCCCCCCAACAAAAC ATGTTCTTCTCCAATTTCCCCATCACTCAATCTTCCAACAACAACAATACATCTTCCCTAATCTACAAAACTTGCAAAGCTAGCTCTGAGCAAGACCCCAACATCTCCTTCAATTTCTGCGTGACATCTCTCAAACCAGCGGCAACCAAGCACAGGCACGGTGACACCAGTCTCCGCCGCCTAGGCCTCATTACCATCTACTTGATTCGACACAACATGAGTAACACGCGCCACCATATCAAGAAGTACTTGCATAAAAaCAAAGGCCCCCGTGACCCGTTCGTTAAGTTGTGTTTGACTGATTGTTTGGAACTTTATTCCGATGCGATCCCGACGGTGAAGCAAGCAAGGAAGGACTACAAGGCCGGGCGATACGCGGATGCGAACTTGAAGATCAGCTCAGTTATGGATGATTGTTCAACATGTGAAGAGGGGTTCAAGGAGAAAGATGGGGTGATTTCACCATTGACTAATAGAAATCATAATGCCTTTGAATTGTCGGCTATTGCACTGTCCATTATCAATATGCTTTGTTGA MFFSNFPITQSSNNNNTSSLIYKTCKASSEQDPNISFNFCVTSLKPAATKHRHGDTSLRRLGLITIYLIRHNMSNTRHHIKKYLHKNKGPRDPFVKLCLTDCLELYSDAIPTVKQARKDYKAGRYADANLKISSVMDDCSTCEEGFKEKDGVISPLTNRNHNAFELSAIALSIINMLC*
BLAST of Cucsa.362290 vs. Swiss-Prot
Match: PLA1_PLAAC (Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 7.6e-25 Identity = 61/161 (37.89%), Postives = 100/161 (62.11%), Query Frame = 1
BLAST of Cucsa.362290 vs. TrEMBL
Match: A0A0A0KBR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080370 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 1.2e-98 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1
BLAST of Cucsa.362290 vs. TrEMBL
Match: E5GC99_CUCME (Invertase inhibitor OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.1e-86 Identity = 161/178 (90.45%), Postives = 170/178 (95.51%), Query Frame = 1
BLAST of Cucsa.362290 vs. TrEMBL
Match: A0A0A0K951_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080380 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.8e-49 Identity = 107/176 (60.80%), Postives = 129/176 (73.30%), Query Frame = 1
BLAST of Cucsa.362290 vs. TrEMBL
Match: A0A0D2PD74_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G168200 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.4e-46 Identity = 101/178 (56.74%), Postives = 131/178 (73.60%), Query Frame = 1
BLAST of Cucsa.362290 vs. TrEMBL
Match: A0A061DWX5_THECC (Plant invertase/pectin methylesterase inhibitor superfamily protein OS=Theobroma cacao GN=TCM_005798 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.0e-44 Identity = 92/177 (51.98%), Postives = 130/177 (73.45%), Query Frame = 1
BLAST of Cucsa.362290 vs. TAIR10
Match: AT5G38610.1 (AT5G38610.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17 Identity = 62/190 (32.63%), Postives = 93/190 (48.95%), Query Frame = 1
BLAST of Cucsa.362290 vs. TAIR10
Match: AT5G46940.1 (AT5G46940.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 80.9 bits (198), Expect = 8.9e-16 Identity = 55/171 (32.16%), Postives = 85/171 (49.71%), Query Frame = 1
BLAST of Cucsa.362290 vs. TAIR10
Match: AT5G46970.1 (AT5G46970.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 72.4 bits (176), Expect = 3.2e-13 Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 1
BLAST of Cucsa.362290 vs. TAIR10
Match: AT5G46930.1 (AT5G46930.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12 Identity = 49/160 (30.63%), Postives = 80/160 (50.00%), Query Frame = 1
BLAST of Cucsa.362290 vs. TAIR10
Match: AT5G46960.1 (AT5G46960.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-11 Identity = 50/159 (31.45%), Postives = 79/159 (49.69%), Query Frame = 1
BLAST of Cucsa.362290 vs. NCBI nr
Match: gi|449454566|ref|XP_004145025.1| (PREDICTED: putative invertase inhibitor [Cucumis sativus]) HSP 1 Score: 367.1 bits (941), Expect = 1.8e-98 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1
BLAST of Cucsa.362290 vs. NCBI nr
Match: gi|307136270|gb|ADN34098.1| (invertase inhibitor [Cucumis melo subsp. melo]) HSP 1 Score: 325.5 bits (833), Expect = 5.9e-86 Identity = 161/178 (90.45%), Postives = 170/178 (95.51%), Query Frame = 1
BLAST of Cucsa.362290 vs. NCBI nr
Match: gi|659120167|ref|XP_008460050.1| (PREDICTED: putative invertase inhibitor [Cucumis melo]) HSP 1 Score: 325.5 bits (833), Expect = 5.9e-86 Identity = 161/178 (90.45%), Postives = 170/178 (95.51%), Query Frame = 1
BLAST of Cucsa.362290 vs. NCBI nr
Match: gi|449454568|ref|XP_004145026.1| (PREDICTED: putative invertase inhibitor [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 2.6e-49 Identity = 107/176 (60.80%), Postives = 129/176 (73.30%), Query Frame = 1
BLAST of Cucsa.362290 vs. NCBI nr
Match: gi|659120165|ref|XP_008460048.1| (PREDICTED: putative invertase inhibitor [Cucumis melo]) HSP 1 Score: 202.6 bits (514), Expect = 5.8e-49 Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |